BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00023566
         (1563 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003561586.1| PREDICTED: tRNA pseudouridine synthase 3-lik...   468   e-129
ref|XP_002467782.1| hypothetical protein SORBIDRAFT_01g033960 [S...   468   e-129
ref|XP_004984202.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   468   e-129
ref|NP_001145731.1| pseudouridylate synthase [Zea mays] gi|21988...   465   e-128
gb|ACF87175.1| unknown [Zea mays] gi|195612012|gb|ACG27836.1| hy...   465   e-128
ref|XP_006589470.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   454   e-125
ref|XP_004290464.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   453   e-124
emb|CBI29343.3| unnamed protein product [Vitis vinifera]              453   e-124
ref|XP_006589473.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   452   e-124
ref|XP_003535557.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   452   e-124
ref|XP_006651442.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   451   e-124
ref|XP_006589471.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   447   e-123
ref|XP_006606191.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   446   e-122
gb|EMS67986.1| tRNA pseudouridine synthase 3 [Triticum urartu]        445   e-122
ref|XP_003555416.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   444   e-122
gb|EOY20130.1| Pseudouridine synthase isoform 1 [Theobroma cacao]     443   e-121
ref|XP_004496408.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   442   e-121
gb|EMT04195.1| tRNA pseudouridine synthase 3 [Aegilops tauschii]      442   e-121
ref|XP_004496407.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   440   e-121
ref|XP_006473155.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   439   e-120

>ref|XP_003561586.1| PREDICTED: tRNA pseudouridine synthase 3-like [Brachypodium
            distachyon]
          Length = 450

 Score =  468 bits (1205), Expect = e-129
 Identities = 241/384 (62%), Positives = 295/384 (76%), Gaps = 5/384 (1%)
 Frame = +1

Query: 85   SNNSVKNGHMA-ITGFG-EKLMLMNSETGEEPGLQK--IHHPARRYVALKIMYFGQRFYG 252
            S+ S  +GH   + G G + L  + S+     G Q   + H  +R VALKIMYFGQRFYG
Sbjct: 70   SHESRTSGHDCNVNGEGLDGLSKIQSKRANRAGHQVGVVSHCQKRLVALKIMYFGQRFYG 129

Query: 253  FASEAQMDPTIESEIFKALERTKLMVGTKESSGYSRCGRTDKGVSSSGQVISLYLRSNLK 432
            FASEA  +PT+ESEIFK LER +L+VG+++ S YSRCGRTDKGVS++GQVISLYLRSNLK
Sbjct: 130  FASEAHTEPTVESEIFKVLERARLLVGSRKESCYSRCGRTDKGVSATGQVISLYLRSNLK 189

Query: 433  DAGGNTVNQMSTLEQKCEIDYVRVLNRVLPGDIRVVGWCPVPTDFHSRFSCLSREYRYLF 612
            D GGN       L+++ EIDYV+VLNR+LP DIRV+GWCPV  DF +RFSCL REY+YLF
Sbjct: 190  DPGGNV------LDERSEIDYVKVLNRMLPRDIRVIGWCPVAADFLARFSCLGREYKYLF 243

Query: 613  WKGNLDILAMKQAAGKFIGEYDFRNFCKMDAANVNNYRRKITFFDISLSKKRYADDELWA 792
            WKG LD+  M++AA KFIGE+DFRNFCKMDAANV+NYRR IT FDIS   +R  +DELWA
Sbjct: 244  WKGGLDVPKMQKAASKFIGEHDFRNFCKMDAANVSNYRRHITDFDISAYDERSNNDELWA 303

Query: 793  MTVRGSAFLWHQVRCMVAVLFMIGQGLESPDVINALLDTIKTPRKPQYNMAPEAPLILRF 972
            M ++GSAFLWHQVRCMVAVLF+IGQGLESP V+++LLD  +TPRKPQY MAPE PLILR 
Sbjct: 304  MNIKGSAFLWHQVRCMVAVLFLIGQGLESPCVVDSLLDITRTPRKPQYTMAPELPLILRS 363

Query: 973  CEFENLEFICSPDANRALHEHLKSEVQRYILQAAIFDEALNCLLPPG-ESSESLRKGKGH 1149
            C+F+ + F+ S DA++AL EHLK E  +Y+LQAAIF EAL+CL  P     ES +K + H
Sbjct: 364  CKFDKVSFMSSSDASQALIEHLKDEHHQYMLQAAIFHEALSCLPSPDLNPFESHQKKRNH 423

Query: 1150 MPLLLRVTEPSYEERRNKLCLKAT 1221
            +PL+ R TEPSYEER  KL ++ T
Sbjct: 424  IPLMSRQTEPSYEERIAKLKVRPT 447


>ref|XP_002467782.1| hypothetical protein SORBIDRAFT_01g033960 [Sorghum bicolor]
            gi|241921636|gb|EER94780.1| hypothetical protein
            SORBIDRAFT_01g033960 [Sorghum bicolor]
          Length = 459

 Score =  468 bits (1205), Expect = e-129
 Identities = 239/401 (59%), Positives = 296/401 (73%), Gaps = 2/401 (0%)
 Frame = +1

Query: 19   EIRNIENLEAVLGCLSDNFTASSNNSVK-NGHMAITGFGEKLMLMNSETGEEPGLQKIHH 195
            + R    LE  L    D+   S+ N V+ N +    G  +        TG   G   + H
Sbjct: 61   KFRQSSTLEKDLSFQFDHTVVSTANEVQCNVNAEGNGLPDDSSKRTKRTGRHVG--NLSH 118

Query: 196  PARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGTKESSGYSRCGRTD 375
              +R VALK+MYFGQRFYGF+SE   +PT+ESEIFKALER KLMVG+++ S YSRCGRTD
Sbjct: 119  CPKRLVALKVMYFGQRFYGFSSEGNTEPTVESEIFKALERAKLMVGSRKESCYSRCGRTD 178

Query: 376  KGVSSSGQVISLYLRSNLKDAGGNTVNQMSTLEQKCEIDYVRVLNRVLPGDIRVVGWCPV 555
            KGVS++GQVISLYLRSN+KD GG+       L+++ EIDYV+VLNR+LP DIRV+GWCPV
Sbjct: 179  KGVSATGQVISLYLRSNIKDVGGDM------LDERSEIDYVKVLNRILPRDIRVLGWCPV 232

Query: 556  PTDFHSRFSCLSREYRYLFWKGNLDILAMKQAAGKFIGEYDFRNFCKMDAANVNNYRRKI 735
            P DFH+RF+CLSREY+YLFWKG+LDIL M++AA KFIGE+DFRNFCKMDAANV+NYRR+I
Sbjct: 233  PADFHARFTCLSREYKYLFWKGDLDILEMQKAASKFIGEHDFRNFCKMDAANVSNYRRRI 292

Query: 736  TFFDISLSKKRYADDELWAMTVRGSAFLWHQVRCMVAVLFMIGQGLESPDVINALLDTIK 915
            T F IS   +R  +DEL +M ++GSAFLWHQVRCMVAVLF+IGQGLESP V+++LLD  K
Sbjct: 293  TEFTISACDRRSNNDELCSMMIKGSAFLWHQVRCMVAVLFLIGQGLESPSVVDSLLDITK 352

Query: 916  TPRKPQYNMAPEAPLILRFCEFENLEFICSPDANRALHEHLKSEVQRYILQAAIFDEALN 1095
            TPRKPQY MAPE PLILR C F+   F+CS DA+++L EH   E   ++LQA IF  A +
Sbjct: 353  TPRKPQYKMAPELPLILRSCLFDKANFMCSSDASQSLTEHFNDEYHHHMLQAEIFHIASS 412

Query: 1096 CL-LPPGESSESLRKGKGHMPLLLRVTEPSYEERRNKLCLK 1215
            CL  P   S E+L+K + H+PLL R TEPSYEER +K+  K
Sbjct: 413  CLPFPEPNSLETLQKKRNHIPLLSRQTEPSYEERISKVKTK 453


>ref|XP_004984202.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X1
            [Setaria italica] gi|514819007|ref|XP_004984203.1|
            PREDICTED: tRNA pseudouridine(38/39) synthase-like
            isoform X2 [Setaria italica]
          Length = 468

 Score =  468 bits (1203), Expect = e-129
 Identities = 236/396 (59%), Positives = 296/396 (74%), Gaps = 2/396 (0%)
 Frame = +1

Query: 40   LEAVLGCLSDNFTASSNNSVK-NGHMAITGFGEKLMLMNSETGEEPGLQKIHHPARRYVA 216
            LE  L    D+   S+ N ++ N +    G  +        TG +  +  + H  +R VA
Sbjct: 78   LEKDLSPPFDHTVISTENEIQCNRNAEGNGLPDDSSKRTKRTGHQVAI--LSHCPKRLVA 135

Query: 217  LKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGTKESSGYSRCGRTDKGVSSSG 396
            LK+MYFGQRFYGF+SE  M+PT+ESEIFKALER KLMV +++ S YSRCGRTDKGVS+SG
Sbjct: 136  LKVMYFGQRFYGFSSEGNMEPTVESEIFKALERAKLMVASRKESCYSRCGRTDKGVSASG 195

Query: 397  QVISLYLRSNLKDAGGNTVNQMSTLEQKCEIDYVRVLNRVLPGDIRVVGWCPVPTDFHSR 576
            QVISLYLRSN+KD G +       L+++ EIDYV+VLNR+LP DIRV+GWCPVP DFH+R
Sbjct: 196  QVISLYLRSNIKDVGEDM------LDERSEIDYVKVLNRILPRDIRVLGWCPVPADFHAR 249

Query: 577  FSCLSREYRYLFWKGNLDILAMKQAAGKFIGEYDFRNFCKMDAANVNNYRRKITFFDISL 756
            F+CL REY+YLFW+G+LDIL M++AA KFIGE+DFRNFCKMDAANV+NY+R+IT F IS 
Sbjct: 250  FTCLGREYKYLFWRGDLDILEMQKAASKFIGEHDFRNFCKMDAANVSNYKRRITEFTISS 309

Query: 757  SKKRYADDELWAMTVRGSAFLWHQVRCMVAVLFMIGQGLESPDVINALLDTIKTPRKPQY 936
              KR  +DEL +MT++G+AFLWHQVRCMVAVLF+IGQGLESP V+++LLD  KTPRKPQY
Sbjct: 310  CDKRSYNDELCSMTIKGTAFLWHQVRCMVAVLFLIGQGLESPSVVDSLLDITKTPRKPQY 369

Query: 937  NMAPEAPLILRFCEFENLEFICSPDANRALHEHLKSEVQRYILQAAIFDEALNCL-LPPG 1113
             MA E PLILR C+F+  +F+CS D +++L EHL  E   Y+LQA IF EAL+CL  P  
Sbjct: 370  KMAAELPLILRSCQFDKADFMCSSDVSQSLTEHLNDEYHHYMLQAEIFHEALSCLPCPES 429

Query: 1114 ESSESLRKGKGHMPLLLRVTEPSYEERRNKLCLKAT 1221
               E+L+K + H+PLL R TEPSYEER  K+  K T
Sbjct: 430  NPLETLQKKRNHIPLLSRQTEPSYEERIAKVKTKQT 465


>ref|NP_001145731.1| pseudouridylate synthase [Zea mays] gi|219884209|gb|ACL52479.1|
            unknown [Zea mays] gi|414867029|tpg|DAA45586.1| TPA:
            pseudouridylate synthase [Zea mays]
          Length = 486

 Score =  465 bits (1197), Expect = e-128
 Identities = 237/394 (60%), Positives = 297/394 (75%), Gaps = 2/394 (0%)
 Frame = +1

Query: 40   LEAVLGCLSDNFTASSNNSVK-NGHMAITGFGEKLMLMNSETGEEPGLQKIHHPARRYVA 216
            +E  L    D+   S+ N ++ N +    G  E        TG + G+  + H  +R VA
Sbjct: 95   MEKDLSSPFDHTVISNANEMQCNRNADDNGLPEDSSKHTKRTGRKVGI--LSHCPKRLVA 152

Query: 217  LKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGTKESSGYSRCGRTDKGVSSSG 396
            LK+MYFGQRFYGF+SE  ++PT+ESEIFKALER KLMV  ++ S YSRCGRTDKGVS++G
Sbjct: 153  LKVMYFGQRFYGFSSEGNIEPTVESEIFKALERAKLMVANRKESCYSRCGRTDKGVSATG 212

Query: 397  QVISLYLRSNLKDAGGNTVNQMSTLEQKCEIDYVRVLNRVLPGDIRVVGWCPVPTDFHSR 576
            QVISLYLRSN+KD GG+       L+++ EIDYV+VLNR+LP DIRV+GWCPVP DFH+R
Sbjct: 213  QVISLYLRSNIKDVGGDM------LDERSEIDYVKVLNRILPRDIRVLGWCPVPADFHAR 266

Query: 577  FSCLSREYRYLFWKGNLDILAMKQAAGKFIGEYDFRNFCKMDAANVNNYRRKITFFDISL 756
            F+CLSREY+YLFWKG+LDIL M++AA KFIGE+DFRNFCKMDAANV+NYRR IT F IS 
Sbjct: 267  FTCLSREYKYLFWKGDLDILEMQKAASKFIGEHDFRNFCKMDAANVSNYRRHITEFTISA 326

Query: 757  SKKRYADDELWAMTVRGSAFLWHQVRCMVAVLFMIGQGLESPDVINALLDTIKTPRKPQY 936
              +R  +DEL +MT++GSAFLWHQVRCMVAVLF+IGQGLESP V+++LLD +KT RKPQY
Sbjct: 327  CDRRSNNDELCSMTIKGSAFLWHQVRCMVAVLFLIGQGLESPSVVDSLLDIMKTSRKPQY 386

Query: 937  NMAPEAPLILRFCEFENLEFICSPDANRALHEHLKSEVQRYILQAAIFDEALNCL-LPPG 1113
             MAPE PLIL+ C F+   F+CS DA+R+L EHL  E + ++LQA IF  A +CL  P  
Sbjct: 387  KMAPELPLILQSCLFDKANFMCSADASRSLTEHLNDEYRHHMLQAEIFHIASSCLPFPEP 446

Query: 1114 ESSESLRKGKGHMPLLLRVTEPSYEERRNKLCLK 1215
             SSE+ +K + H+PLL R TEPSYEER +K+  K
Sbjct: 447  NSSETPQKKRNHIPLLSRETEPSYEERISKVKAK 480


>gb|ACF87175.1| unknown [Zea mays] gi|195612012|gb|ACG27836.1| hypothetical protein
            [Zea mays] gi|414867030|tpg|DAA45587.1| TPA:
            pseudouridylate synthase isoform 1 [Zea mays]
            gi|414867031|tpg|DAA45588.1| TPA: pseudouridylate
            synthase isoform 2 [Zea mays]
            gi|414867032|tpg|DAA45589.1| TPA: pseudouridylate
            synthase isoform 3 [Zea mays]
            gi|414867033|tpg|DAA45590.1| TPA: pseudouridylate
            synthase isoform 4 [Zea mays]
          Length = 457

 Score =  465 bits (1197), Expect = e-128
 Identities = 237/394 (60%), Positives = 297/394 (75%), Gaps = 2/394 (0%)
 Frame = +1

Query: 40   LEAVLGCLSDNFTASSNNSVK-NGHMAITGFGEKLMLMNSETGEEPGLQKIHHPARRYVA 216
            +E  L    D+   S+ N ++ N +    G  E        TG + G+  + H  +R VA
Sbjct: 66   MEKDLSSPFDHTVISNANEMQCNRNADDNGLPEDSSKHTKRTGRKVGI--LSHCPKRLVA 123

Query: 217  LKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGTKESSGYSRCGRTDKGVSSSG 396
            LK+MYFGQRFYGF+SE  ++PT+ESEIFKALER KLMV  ++ S YSRCGRTDKGVS++G
Sbjct: 124  LKVMYFGQRFYGFSSEGNIEPTVESEIFKALERAKLMVANRKESCYSRCGRTDKGVSATG 183

Query: 397  QVISLYLRSNLKDAGGNTVNQMSTLEQKCEIDYVRVLNRVLPGDIRVVGWCPVPTDFHSR 576
            QVISLYLRSN+KD GG+       L+++ EIDYV+VLNR+LP DIRV+GWCPVP DFH+R
Sbjct: 184  QVISLYLRSNIKDVGGDM------LDERSEIDYVKVLNRILPRDIRVLGWCPVPADFHAR 237

Query: 577  FSCLSREYRYLFWKGNLDILAMKQAAGKFIGEYDFRNFCKMDAANVNNYRRKITFFDISL 756
            F+CLSREY+YLFWKG+LDIL M++AA KFIGE+DFRNFCKMDAANV+NYRR IT F IS 
Sbjct: 238  FTCLSREYKYLFWKGDLDILEMQKAASKFIGEHDFRNFCKMDAANVSNYRRHITEFTISA 297

Query: 757  SKKRYADDELWAMTVRGSAFLWHQVRCMVAVLFMIGQGLESPDVINALLDTIKTPRKPQY 936
              +R  +DEL +MT++GSAFLWHQVRCMVAVLF+IGQGLESP V+++LLD +KT RKPQY
Sbjct: 298  CDRRSNNDELCSMTIKGSAFLWHQVRCMVAVLFLIGQGLESPSVVDSLLDIMKTSRKPQY 357

Query: 937  NMAPEAPLILRFCEFENLEFICSPDANRALHEHLKSEVQRYILQAAIFDEALNCL-LPPG 1113
             MAPE PLIL+ C F+   F+CS DA+R+L EHL  E + ++LQA IF  A +CL  P  
Sbjct: 358  KMAPELPLILQSCLFDKANFMCSADASRSLTEHLNDEYRHHMLQAEIFHIASSCLPFPEP 417

Query: 1114 ESSESLRKGKGHMPLLLRVTEPSYEERRNKLCLK 1215
             SSE+ +K + H+PLL R TEPSYEER +K+  K
Sbjct: 418  NSSETPQKKRNHIPLLSRETEPSYEERISKVKAK 451


>ref|XP_006589470.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X2
            [Glycine max]
          Length = 425

 Score =  454 bits (1169), Expect = e-125
 Identities = 224/344 (65%), Positives = 272/344 (79%), Gaps = 6/344 (1%)
 Frame = +1

Query: 193  HPARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGTKESSGYSRCGRT 372
            H +RRYVALK+MYFG+RFYGFASEAQM+PT+ESE+FKA E+T+L+VG K+ S YSRCGRT
Sbjct: 78   HHSRRYVALKVMYFGKRFYGFASEAQMEPTVESELFKAFEKTRLLVGNKKESQYSRCGRT 137

Query: 373  DKGVSSSGQVISLYLRSNLKDAGGNTVNQMSTL-EQKCEIDYVRVLNRVLPGDIRVVGWC 549
            DKGVSS GQVI+L+LRSNLK +  N  N    L EQ  EIDYVRVLNRVLP DIR++GWC
Sbjct: 138  DKGVSSVGQVIALFLRSNLKISETNNGNSGVVLDEQHGEIDYVRVLNRVLPNDIRIMGWC 197

Query: 550  PVPTDFHSRFSCLSREYRYLFWKGNLDILAMKQAAGKFIGEYDFRNFCKMDAANVNNYRR 729
            P P DFH+RFSCLSREY+Y FWK NL+I AM+ A  K +GE+DFRNFCKMDAANV+NYRR
Sbjct: 198  PAPVDFHARFSCLSREYKYFFWKENLNIQAMESAGNKLVGEHDFRNFCKMDAANVHNYRR 257

Query: 730  KITFFDISLSKKRYADDELWAMTVRGSAFLWHQVRCMVAVLFMIGQGLESPDVINALLDT 909
            +I  F+IS +  RY D++LW + +RGSAFLWHQVRCMV VLFM+G+GLESP+VI+ LLDT
Sbjct: 258  RIKLFEISPTDVRYNDNQLWVIKIRGSAFLWHQVRCMVVVLFMVGKGLESPNVIDMLLDT 317

Query: 910  IKTPRKPQYNMAPEAPLILRFCEFENLEFICSPDANRALHEHLKSEVQRYILQAAIFDEA 1089
             +  RKPQY MA E PL+L+ CEF+N++F+CS +A  ALH HL +E Q Y LQAAIF EA
Sbjct: 318  ARILRKPQYTMASEVPLVLQSCEFDNIKFMCSSEAGEALHVHLVNECQIYQLQAAIFHEA 377

Query: 1090 -LNCLLPPGESS----ESLRKGKGHMPLLLRVTEPSYEERRNKL 1206
             LNC+    + S    +  +K   H+PL+ R TEPSYEERR KL
Sbjct: 378  LLNCVPLSNDQSLLHFQGSKKKVSHVPLMSRPTEPSYEERRAKL 421


>ref|XP_004290464.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like [Fragaria vesca
            subsp. vesca]
          Length = 432

 Score =  453 bits (1165), Expect = e-124
 Identities = 238/427 (55%), Positives = 293/427 (68%), Gaps = 20/427 (4%)
 Frame = +1

Query: 4    ESKGDEIRN-IENLEAVLGCLSDNFTASSNNSVKNGHMAITGFGE-----KLMLMNSETG 165
            +S  D +R+ ++ LEA+   LS        +  KN   +++         KL   N +T 
Sbjct: 2    DSLVDSLRHRVQELEALNAKLSSQLAVCRCHQDKNEDSSVSSDNADEKSGKLSFQNKKTI 61

Query: 166  EEPGLQK--------IHHPARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTK 321
             E   +K        ++H ++RYVALK+MYFG+RFYGFA+EAQMDPT+ESEIFKALE+T+
Sbjct: 62   REKVKEKFPGYDTRIMNHHSKRYVALKVMYFGRRFYGFAAEAQMDPTVESEIFKALEKTR 121

Query: 322  LMVGTKESSGYSRCGRTDKGVSSSGQVISLYLRSNLKDAGGNTVNQMSTLEQKCEIDYVR 501
            L++G K+ S YSRCGRTDKGVS+ GQV  L L S +     N +        + EIDYVR
Sbjct: 122  LLIGDKKESHYSRCGRTDKGVSAVGQVTHLSLISYISSPHSNCIIHSPLFPSEGEIDYVR 181

Query: 502  VLNRVLPGDIRVVGWCPVPTDFHSRFSCLSREYRYLFWKGNLDILAMKQAAGKFIGEYDF 681
            VLNR LP DIRV GWCPVP  F +RFSCLSREY YLFW GNL+ LAM+ A  KF+GE+DF
Sbjct: 182  VLNRALPDDIRVFGWCPVPLGFSARFSCLSREYYYLFWGGNLNFLAMETAGRKFVGEHDF 241

Query: 682  RNFCKMDAANVNNYRRKITFFDISLSKKRYADDELWAMTVRGSAFLWHQVRCMVAVLFMI 861
            RNFCKMDA NV+NYRRKIT F IS    R+  ++LWA  ++GSAFLWHQVRCMVA+L +I
Sbjct: 242  RNFCKMDALNVHNYRRKITSFAISPCDVRFEGNQLWAFKIKGSAFLWHQVRCMVAILLLI 301

Query: 862  GQGLESPDVINALLDTIKTPRKPQYNMAPEAPLILRFCEFENLEFICSPDANRALHEHLK 1041
            GQG ESPDV++ALLDT K PRKPQY MAPE PL+L+FCEFE L+F CS DA +AL  HL 
Sbjct: 302  GQGHESPDVVDALLDTDKIPRKPQYGMAPEIPLVLQFCEFEGLKFTCSSDACQALQIHLA 361

Query: 1042 SEVQRYILQAAIFDEALNCLLPPGESSESL------RKGKGHMPLLLRVTEPSYEERRNK 1203
            SE + Y LQAAIF+EAL C LP  +   SL      +K   H+PL+ R TEPSYEERR K
Sbjct: 362  SECRNYHLQAAIFNEALRCCLPVEKDQSSLDNNGTMKKKSSHVPLMSRPTEPSYEERRAK 421

Query: 1204 LCLKATR 1224
            L  +  R
Sbjct: 422  LNTRTCR 428


>emb|CBI29343.3| unnamed protein product [Vitis vinifera]
          Length = 466

 Score =  453 bits (1165), Expect = e-124
 Identities = 230/377 (61%), Positives = 279/377 (74%), Gaps = 30/377 (7%)
 Frame = +1

Query: 163  GEEPG--LQKIHHPARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGT 336
            G+ PG  ++ ++H ++RYVALK+MYFG RFYGFASEA MDPT+ESEIFKALE+T L VG 
Sbjct: 85   GKIPGTNMRTMNHISKRYVALKVMYFGPRFYGFASEAHMDPTVESEIFKALEKTWLAVGD 144

Query: 337  KESSGYSRCGRTDKGVSSSGQVISLYLRSNLKDAGGNTVNQMS----------------- 465
            K+   YSRCGRTDKGVSS GQVI+L+LRSNLK+ G    N                    
Sbjct: 145  KKELQYSRCGRTDKGVSSVGQVIALFLRSNLKEIGAREENSKEVVPEEQYEERREVKDEG 204

Query: 466  ---TLEQKCEIDYVRVLNRVLPGDIRVVGWCPVPTDFHSRFSCLSREYRYLFWKGNLDIL 636
               +L  + EIDY+RVLNRVLP DIRV+GWCPVP  FH+RFSCLSREY+Y FW+GNL+IL
Sbjct: 205  GGDSLASEGEIDYMRVLNRVLPKDIRVMGWCPVPIGFHARFSCLSREYKYFFWRGNLNIL 264

Query: 637  AMKQAAGKFIGEYDFRNFCKMDAANVNNYRRKITFFDISLSKKRYADDELWAMTVRGSAF 816
            AM+ A  KF+GE+DFRNFCKMDA NV+NYRR I  F+I+ +  RY  ++LWA+ ++GSAF
Sbjct: 265  AMESAGKKFVGEHDFRNFCKMDAVNVHNYRRHIISFEIAPTNNRYDGNQLWAIKIKGSAF 324

Query: 817  LWHQVRCMVAVLFMIGQGLESPDVINALLDTIKTPRKPQYNMAPEAPLILRFCEFENLEF 996
            LWHQVRCMVAVLFMIGQGLESPDV++ALLDT +T RKPQY MAPE PL+L  CEFE L+F
Sbjct: 325  LWHQVRCMVAVLFMIGQGLESPDVVDALLDTERTSRKPQYAMAPEIPLVLESCEFEGLKF 384

Query: 997  ICSPDANRALHEHLKSEVQRYILQAAIFDEALNCLLPPGESSE--------SLRKGKGHM 1152
            ICS DA +AL  HL++E + Y LQAAIF EAL   LP   S+E        +++K   H+
Sbjct: 385  ICSSDAGQALRMHLENECRTYQLQAAIFHEALLSCLPSANSAEKQNSLNNGTIKKEAAHI 444

Query: 1153 PLLLRVTEPSYEERRNK 1203
             L+ R TEPSYEERR K
Sbjct: 445  DLMSRPTEPSYEERRAK 461


>ref|XP_006589473.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X5
            [Glycine max]
          Length = 406

 Score =  452 bits (1164), Expect = e-124
 Identities = 222/345 (64%), Positives = 273/345 (79%), Gaps = 7/345 (2%)
 Frame = +1

Query: 193  HPARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGTKESSGYSRCGRT 372
            H +RRYVALK+MYFG+RFYGFASEAQM+PT+ESE+FKA E+T+L+VG K+ S YSRCGRT
Sbjct: 58   HHSRRYVALKVMYFGKRFYGFASEAQMEPTVESELFKAFEKTRLLVGNKKESQYSRCGRT 117

Query: 373  DKGVSSSGQVISLYLRSNLKDAGGNTVNQMSTLEQKCE--IDYVRVLNRVLPGDIRVVGW 546
            DKGVSS GQVI+L+LRSNLK +  N  N    L+++ E  IDYVRVLNRVLP DIR++GW
Sbjct: 118  DKGVSSVGQVIALFLRSNLKISETNNGNSGVVLDEQHEGEIDYVRVLNRVLPNDIRIMGW 177

Query: 547  CPVPTDFHSRFSCLSREYRYLFWKGNLDILAMKQAAGKFIGEYDFRNFCKMDAANVNNYR 726
            CP P DFH+RFSCLSREY+Y FWK NL+I AM+ A  K +GE+DFRNFCKMDAANV+NYR
Sbjct: 178  CPAPVDFHARFSCLSREYKYFFWKENLNIQAMESAGNKLVGEHDFRNFCKMDAANVHNYR 237

Query: 727  RKITFFDISLSKKRYADDELWAMTVRGSAFLWHQVRCMVAVLFMIGQGLESPDVINALLD 906
            R+I  F+IS +  RY D++LW + +RGSAFLWHQVRCMV VLFM+G+GLESP+VI+ LLD
Sbjct: 238  RRIKLFEISPTDVRYNDNQLWVIKIRGSAFLWHQVRCMVVVLFMVGKGLESPNVIDMLLD 297

Query: 907  TIKTPRKPQYNMAPEAPLILRFCEFENLEFICSPDANRALHEHLKSEVQRYILQAAIFDE 1086
            T +  RKPQY MA E PL+L+ CEF+N++F+CS +A  ALH HL +E Q Y LQAAIF E
Sbjct: 298  TARILRKPQYTMASEVPLVLQSCEFDNIKFMCSSEAGEALHVHLVNECQIYQLQAAIFHE 357

Query: 1087 A-LNCLLPPGESS----ESLRKGKGHMPLLLRVTEPSYEERRNKL 1206
            A LNC+    + S    +  +K   H+PL+ R TEPSYEERR KL
Sbjct: 358  ALLNCVPLSNDQSLLHFQGSKKKVSHVPLMSRPTEPSYEERRAKL 402


>ref|XP_003535557.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X1
            [Glycine max]
          Length = 426

 Score =  452 bits (1164), Expect = e-124
 Identities = 222/345 (64%), Positives = 273/345 (79%), Gaps = 7/345 (2%)
 Frame = +1

Query: 193  HPARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGTKESSGYSRCGRT 372
            H +RRYVALK+MYFG+RFYGFASEAQM+PT+ESE+FKA E+T+L+VG K+ S YSRCGRT
Sbjct: 78   HHSRRYVALKVMYFGKRFYGFASEAQMEPTVESELFKAFEKTRLLVGNKKESQYSRCGRT 137

Query: 373  DKGVSSSGQVISLYLRSNLKDAGGNTVNQMSTLEQKCE--IDYVRVLNRVLPGDIRVVGW 546
            DKGVSS GQVI+L+LRSNLK +  N  N    L+++ E  IDYVRVLNRVLP DIR++GW
Sbjct: 138  DKGVSSVGQVIALFLRSNLKISETNNGNSGVVLDEQHEGEIDYVRVLNRVLPNDIRIMGW 197

Query: 547  CPVPTDFHSRFSCLSREYRYLFWKGNLDILAMKQAAGKFIGEYDFRNFCKMDAANVNNYR 726
            CP P DFH+RFSCLSREY+Y FWK NL+I AM+ A  K +GE+DFRNFCKMDAANV+NYR
Sbjct: 198  CPAPVDFHARFSCLSREYKYFFWKENLNIQAMESAGNKLVGEHDFRNFCKMDAANVHNYR 257

Query: 727  RKITFFDISLSKKRYADDELWAMTVRGSAFLWHQVRCMVAVLFMIGQGLESPDVINALLD 906
            R+I  F+IS +  RY D++LW + +RGSAFLWHQVRCMV VLFM+G+GLESP+VI+ LLD
Sbjct: 258  RRIKLFEISPTDVRYNDNQLWVIKIRGSAFLWHQVRCMVVVLFMVGKGLESPNVIDMLLD 317

Query: 907  TIKTPRKPQYNMAPEAPLILRFCEFENLEFICSPDANRALHEHLKSEVQRYILQAAIFDE 1086
            T +  RKPQY MA E PL+L+ CEF+N++F+CS +A  ALH HL +E Q Y LQAAIF E
Sbjct: 318  TARILRKPQYTMASEVPLVLQSCEFDNIKFMCSSEAGEALHVHLVNECQIYQLQAAIFHE 377

Query: 1087 A-LNCLLPPGESS----ESLRKGKGHMPLLLRVTEPSYEERRNKL 1206
            A LNC+    + S    +  +K   H+PL+ R TEPSYEERR KL
Sbjct: 378  ALLNCVPLSNDQSLLHFQGSKKKVSHVPLMSRPTEPSYEERRAKL 422


>ref|XP_006651442.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like [Oryza
            brachyantha]
          Length = 428

 Score =  451 bits (1160), Expect = e-124
 Identities = 226/353 (64%), Positives = 279/353 (79%), Gaps = 1/353 (0%)
 Frame = +1

Query: 163  GEEPGLQKIHHPARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGTKE 342
            G + G+  + H  +R VALKIMYFGQRF+GFASEA  +PT+ESEIFKALER KL+VG+++
Sbjct: 80   GHQAGV--VRHCPKRLVALKIMYFGQRFFGFASEAHTEPTVESEIFKALERAKLLVGSRK 137

Query: 343  SSGYSRCGRTDKGVSSSGQVISLYLRSNLKDAGGNTVNQMSTLEQKCEIDYVRVLNRVLP 522
             S YSRCGRTDKGVS++GQVISL+LRSN+KDAG      ++ ++ + EIDYV+VLNR+LP
Sbjct: 138  ESCYSRCGRTDKGVSATGQVISLFLRSNIKDAG------LAVVDNESEIDYVKVLNRILP 191

Query: 523  GDIRVVGWCPVPTDFHSRFSCLSREYRYLFWKGNLDILAMKQAAGKFIGEYDFRNFCKMD 702
             DIRV+GWCPV  DF +RFSCL REY YLFWKG+LD+L M++AA KFIGE+D+RNFCKMD
Sbjct: 192  HDIRVIGWCPVAADFLARFSCLGREYIYLFWKGDLDVLKMQKAAAKFIGEHDYRNFCKMD 251

Query: 703  AANVNNYRRKITFFDISLSKKRYADDELWAMTVRGSAFLWHQVRCMVAVLFMIGQGLESP 882
            AANV+NYRR IT F+IS   +R   DELWA+T++GSAFLWHQVRCMVAVLF+IGQGLE P
Sbjct: 252  AANVSNYRRHITDFNISSYNQRSNYDELWAITIKGSAFLWHQVRCMVAVLFLIGQGLELP 311

Query: 883  DVINALLDTIKTPRKPQYNMAPEAPLILRFCEFENLEFICSPDANRALHEHLKSEVQRYI 1062
             ++++LLD  KTPRKPQY MA E PLILR C F+ + F+ S DA++AL EHLK E  +Y+
Sbjct: 312  CIVDSLLDITKTPRKPQYKMASEIPLILRSCLFDEVNFMSSSDASQALIEHLKDEYHQYM 371

Query: 1063 LQAAIFDEALNCL-LPPGESSESLRKGKGHMPLLLRVTEPSYEERRNKLCLKA 1218
            LQAAIF EAL+CL      S E   K + H+PL+ R TEPSYEER  KL  K+
Sbjct: 372  LQAAIFREALSCLTFRERNSFEPHHKKRNHIPLMSRQTEPSYEERVAKLKTKS 424


>ref|XP_006589471.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X3
            [Glycine max]
          Length = 420

 Score =  447 bits (1151), Expect = e-123
 Identities = 221/343 (64%), Positives = 270/343 (78%), Gaps = 5/343 (1%)
 Frame = +1

Query: 193  HPARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGTKESSGYSRCGRT 372
            H +RRYVALK+MYFG+RFYGFASEAQM+PT+ESE+FKA E+T+L+VG K+ S YSRCGRT
Sbjct: 78   HHSRRYVALKVMYFGKRFYGFASEAQMEPTVESELFKAFEKTRLLVGNKKESQYSRCGRT 137

Query: 373  DKGVSSSGQVISLYLRSNLKDAGGNTVNQMSTLEQKCE--IDYVRVLNRVLPGDIRVVGW 546
            DKGVSS GQVI+L+LRSNLK +  N  N    L+++ E  IDYVRVLNRVLP DIR++GW
Sbjct: 138  DKGVSSVGQVIALFLRSNLKISETNNGNSGVVLDEQHEGEIDYVRVLNRVLPNDIRIMGW 197

Query: 547  CPVPTDFHSRFSCLSREYRYLFWKGNLDILAMKQAAGKFIGEYDFRNFCKMDAANVNNYR 726
            CP P DFH+RFSCLSREY+Y FWK NL+I AM+ A  K +GE+DFRNFCKMDAANV+NYR
Sbjct: 198  CPAPVDFHARFSCLSREYKYFFWKENLNIQAMESAGNKLVGEHDFRNFCKMDAANVHNYR 257

Query: 727  RKITFFDISLSKKRYADDELWAMTVRGSAFLWHQVRCMVAVLFMIGQGLESPDVINALLD 906
            R+I  F+IS +  RY D++LW + +RGSAFLWHQVRCMV VLFM+G+GLESP+VI+ LLD
Sbjct: 258  RRIKLFEISPTDVRYNDNQLWVIKIRGSAFLWHQVRCMVVVLFMVGKGLESPNVIDMLLD 317

Query: 907  TIKTPRKPQYNMAPEAPLILRFCEFENLEFICSPDANRALHEHLKSEVQRYILQAAIFDE 1086
            T +  RKPQY MA E PL+L+ CEF+N++F+CS +A  ALH HL +E Q Y LQAAIF E
Sbjct: 318  TARILRKPQYTMASEVPLVLQSCEFDNIKFMCSSEAGEALHVHLVNECQIYQLQAAIFHE 377

Query: 1087 AL---NCLLPPGESSESLRKGKGHMPLLLRVTEPSYEERRNKL 1206
            AL     LL      +  +K   H+PL+ R TEPSYEERR KL
Sbjct: 378  ALLNYQSLL----HFQGSKKKVSHVPLMSRPTEPSYEERRAKL 416


>ref|XP_006606191.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X2
            [Glycine max]
          Length = 425

 Score =  446 bits (1148), Expect = e-122
 Identities = 222/344 (64%), Positives = 270/344 (78%), Gaps = 6/344 (1%)
 Frame = +1

Query: 193  HPARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGTKESSGYSRCGRT 372
            H ++RYVALK+ YFG+RFYGFASEAQM+PT+ESE+FKA E+T+L+VG K+ S YSRCGRT
Sbjct: 78   HHSKRYVALKVTYFGKRFYGFASEAQMEPTVESELFKAFEKTRLLVGDKKESQYSRCGRT 137

Query: 373  DKGVSSSGQVISLYLRSNLKDAGGNTVNQMSTL-EQKCEIDYVRVLNRVLPGDIRVVGWC 549
            DKGVSS GQVI+L+LRSNLK +  N  N    L EQ  EIDYV VLNRVLP DIR++GWC
Sbjct: 138  DKGVSSVGQVIALFLRSNLKISATNNGNSGVVLDEQHGEIDYVGVLNRVLPNDIRIMGWC 197

Query: 550  PVPTDFHSRFSCLSREYRYLFWKGNLDILAMKQAAGKFIGEYDFRNFCKMDAANVNNYRR 729
            P P DFH+RFSCLSREY+Y FWK NL+I A++ A  K +GE+DFRNFCKMDAANV+NYRR
Sbjct: 198  PAPVDFHARFSCLSREYKYFFWKENLNIPAIEVAGNKLVGEHDFRNFCKMDAANVHNYRR 257

Query: 730  KITFFDISLSKKRYADDELWAMTVRGSAFLWHQVRCMVAVLFMIGQGLESPDVINALLDT 909
             IT F+IS +  RY D++LW + +RGSAFLWHQVRCMVAVLFM+G+GLESP+VI+ LLDT
Sbjct: 258  CITLFEISSTDVRYNDNQLWVIKIRGSAFLWHQVRCMVAVLFMVGKGLESPNVIDMLLDT 317

Query: 910  IKTPRKPQYNMAPEAPLILRFCEFENLEFICSPDANRALHEHLKSEVQRYILQAAIFDEA 1089
             +  RKPQY MA E PL+L+ CEF+N++F+CS DA  AL  HL +E Q Y LQAAIF EA
Sbjct: 318  SRILRKPQYTMASEVPLVLQSCEFDNIKFMCSSDAGEALRVHLVNECQIYQLQAAIFHEA 377

Query: 1090 -LNCLLPPGESS----ESLRKGKGHMPLLLRVTEPSYEERRNKL 1206
             LNC+    + S    +  +K   H+PL+ R TEPSYEERR KL
Sbjct: 378  LLNCVPLSNDQSLLPFQGSKKKVSHVPLMSRPTEPSYEERRAKL 421


>gb|EMS67986.1| tRNA pseudouridine synthase 3 [Triticum urartu]
          Length = 462

 Score =  445 bits (1145), Expect = e-122
 Identities = 223/343 (65%), Positives = 266/343 (77%), Gaps = 1/343 (0%)
 Frame = +1

Query: 151  NSETGEEPGLQKIHHPARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMV 330
            +  TG + G   + H  +R +ALKIMYFGQRFYGFASEA  +PT+ESEIFKA+ER +L+V
Sbjct: 95   SKRTGRQQG--NVSHCQKRLIALKIMYFGQRFYGFASEAHTEPTVESEIFKAIERARLLV 152

Query: 331  GTKESSGYSRCGRTDKGVSSSGQVISLYLRSNLKDAGGNTVNQMSTLEQKCEIDYVRVLN 510
            G++E S YSRCGRTDKGVS++GQVISLYLRSNLKDAG N + + S      EIDYV VLN
Sbjct: 153  GSREDSCYSRCGRTDKGVSATGQVISLYLRSNLKDAGENILGERS------EIDYVSVLN 206

Query: 511  RVLPGDIRVVGWCPVPTDFHSRFSCLSREYRYLFWKGNLDILAMKQAAGKFIGEYDFRNF 690
            R LP DIRV+GWCPV  DF +RFSCL REY+YLFWK  LD+  M++AA KFIGE+DFRNF
Sbjct: 207  RNLPRDIRVIGWCPVAADFLARFSCLGREYKYLFWKRGLDVSKMQKAAFKFIGEHDFRNF 266

Query: 691  CKMDAANVNNYRRKITFFDISLSKKRYADDELWAMTVRGSAFLWHQVRCMVAVLFMIGQG 870
            CKMDAANV+NY+R IT F+IS   +R   DELW+M +RGSAFLWHQVRCM AVLF +GQG
Sbjct: 267  CKMDAANVSNYKRYITDFNISACDQRSNHDELWSMNIRGSAFLWHQVRCMAAVLFFVGQG 326

Query: 871  LESPDVINALLDTIKTPRKPQYNMAPEAPLILRFCEFENLEFICSPDANRALHEHLKSEV 1050
            LESP V+++LLD  KTPRKPQY MAPE PLILR C F+ + F+CS DAN+AL EHLK E 
Sbjct: 327  LESPCVVDSLLDITKTPRKPQYTMAPELPLILRSCLFDGVSFMCSSDANQALIEHLKDEH 386

Query: 1051 QRYILQAAIFDEALNCL-LPPGESSESLRKGKGHMPLLLRVTE 1176
             +Y+LQAAIFDEAL CL +P     E  +K + H+PLL R  E
Sbjct: 387  HQYMLQAAIFDEALTCLSIPEPNPLEYPKKKRKHIPLLSREAE 429


>ref|XP_003555416.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X1
            [Glycine max]
          Length = 426

 Score =  444 bits (1143), Expect = e-122
 Identities = 220/345 (63%), Positives = 271/345 (78%), Gaps = 7/345 (2%)
 Frame = +1

Query: 193  HPARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGTKESSGYSRCGRT 372
            H ++RYVALK+ YFG+RFYGFASEAQM+PT+ESE+FKA E+T+L+VG K+ S YSRCGRT
Sbjct: 78   HHSKRYVALKVTYFGKRFYGFASEAQMEPTVESELFKAFEKTRLLVGDKKESQYSRCGRT 137

Query: 373  DKGVSSSGQVISLYLRSNLKDAGGNTVNQMSTLEQKCE--IDYVRVLNRVLPGDIRVVGW 546
            DKGVSS GQVI+L+LRSNLK +  N  N    L+++ E  IDYV VLNRVLP DIR++GW
Sbjct: 138  DKGVSSVGQVIALFLRSNLKISATNNGNSGVVLDEQHEGEIDYVGVLNRVLPNDIRIMGW 197

Query: 547  CPVPTDFHSRFSCLSREYRYLFWKGNLDILAMKQAAGKFIGEYDFRNFCKMDAANVNNYR 726
            CP P DFH+RFSCLSREY+Y FWK NL+I A++ A  K +GE+DFRNFCKMDAANV+NYR
Sbjct: 198  CPAPVDFHARFSCLSREYKYFFWKENLNIPAIEVAGNKLVGEHDFRNFCKMDAANVHNYR 257

Query: 727  RKITFFDISLSKKRYADDELWAMTVRGSAFLWHQVRCMVAVLFMIGQGLESPDVINALLD 906
            R IT F+IS +  RY D++LW + +RGSAFLWHQVRCMVAVLFM+G+GLESP+VI+ LLD
Sbjct: 258  RCITLFEISSTDVRYNDNQLWVIKIRGSAFLWHQVRCMVAVLFMVGKGLESPNVIDMLLD 317

Query: 907  TIKTPRKPQYNMAPEAPLILRFCEFENLEFICSPDANRALHEHLKSEVQRYILQAAIFDE 1086
            T +  RKPQY MA E PL+L+ CEF+N++F+CS DA  AL  HL +E Q Y LQAAIF E
Sbjct: 318  TSRILRKPQYTMASEVPLVLQSCEFDNIKFMCSSDAGEALRVHLVNECQIYQLQAAIFHE 377

Query: 1087 A-LNCLLPPGESS----ESLRKGKGHMPLLLRVTEPSYEERRNKL 1206
            A LNC+    + S    +  +K   H+PL+ R TEPSYEERR KL
Sbjct: 378  ALLNCVPLSNDQSLLPFQGSKKKVSHVPLMSRPTEPSYEERRAKL 422


>gb|EOY20130.1| Pseudouridine synthase isoform 1 [Theobroma cacao]
          Length = 445

 Score =  443 bits (1139), Expect = e-121
 Identities = 224/351 (63%), Positives = 272/351 (77%), Gaps = 8/351 (2%)
 Frame = +1

Query: 178  LQKIHHPARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGTKESSGYS 357
            L+ + H ++RYVALK+MYFG+RFYGFASEAQMDPT+ESEIFKALE+T+L+VG K+ S YS
Sbjct: 91   LEIMTHHSKRYVALKVMYFGKRFYGFASEAQMDPTVESEIFKALEKTRLLVGDKKESLYS 150

Query: 358  RCGRTDKGVSSSGQVISLYLRSNLKDAGGNTVNQ---MSTLEQKCEIDYVRVLNRVLPGD 528
            RCGRTDKGVS+ GQVI+LYLRSNLK+A  N       +S    + EIDYVRVLNRVLP D
Sbjct: 151  RCGRTDKGVSAVGQVIALYLRSNLKEADANDQTSGELISGTRTEGEIDYVRVLNRVLPND 210

Query: 529  IRVVGWCPVPTDFHSRFSCLSREYRYLFWKGNLDILAMKQAAGKFIGEYDFRNFCKMDAA 708
            IR++GW PV  DF++RFSCL+REY Y FW+GNL+   M+ A  KFIGE+DFRNFCKMDAA
Sbjct: 211  IRILGWSPVSIDFNARFSCLAREYTYFFWRGNLNFPDMENAGKKFIGEHDFRNFCKMDAA 270

Query: 709  NVNNYRRKITFFDISLSKKRYADDELWAMTVRGSAFLWHQVRCMVAVLFMIGQGLESPDV 888
            NV+NYRR++T F+IS S  R+  ++L  + V+GSAFLWHQVRCMVAVLFMIGQG+ES  V
Sbjct: 271  NVHNYRRRVTLFEISSSNMRFEGNQLCVIKVKGSAFLWHQVRCMVAVLFMIGQGVESIAV 330

Query: 889  INALLDTIKTPRKPQYNMAPEAPLILRFCEFENLEFICSPDANRALHEHLKSEVQRYILQ 1068
            I+ALLDT KTPRKPQY MAPE PL+L+ C+FE++ FICS D+ +AL  HL++E Q Y LQ
Sbjct: 331  IDALLDTEKTPRKPQYAMAPEIPLVLQSCDFEDVNFICSSDSGQALRIHLENECQAYQLQ 390

Query: 1069 AAIFDEALNCLLPPGESSESLRKG-----KGHMPLLLRVTEPSYEERRNKL 1206
            +AIF EAL   LP       L +G       H+PLL R TEPSYEER  KL
Sbjct: 391  SAIFHEALLSCLPLANGKSLLNEGTIKKVASHVPLLSRPTEPSYEERCAKL 441


>ref|XP_004496408.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X2 [Cicer
            arietinum]
          Length = 427

 Score =  442 bits (1138), Expect = e-121
 Identities = 217/343 (63%), Positives = 268/343 (78%), Gaps = 7/343 (2%)
 Frame = +1

Query: 199  ARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGTKESSGYSRCGRTDK 378
            ++RYVALK+MYFG+RFYGFASEAQM PT+ESEIF+ALE  +L+VG K+ S YSRCGRTDK
Sbjct: 81   SKRYVALKVMYFGKRFYGFASEAQMQPTVESEIFQALEEARLLVGDKKESQYSRCGRTDK 140

Query: 379  GVSSSGQVISLYLRSNLKDAGGNTVNQMSTL--EQKCEIDYVRVLNRVLPGDIRVVGWCP 552
            GVSS GQVI+L+LRS LK +G N  +    +  EQ  EIDYVRVLNRVLP DIR++GWCP
Sbjct: 141  GVSSVGQVIALFLRSRLKISGVNNGSSGDIVLEEQHGEIDYVRVLNRVLPNDIRILGWCP 200

Query: 553  VPTDFHSRFSCLSREYRYLFWKGNLDILAMKQAAGKFIGEYDFRNFCKMDAANVNNYRRK 732
            VP DFH+RFSCLSREY+Y FWK NL+ILAM+ A  KF+GE+DFRNFCKMDAANV+NY R+
Sbjct: 201  VPVDFHARFSCLSREYKYFFWKENLNILAMESAGTKFLGEHDFRNFCKMDAANVHNYMRR 260

Query: 733  ITFFDISLSKKRYADDELWAMTVRGSAFLWHQVRCMVAVLFMIGQGLESPDVINALLDTI 912
            IT F IS +   Y  ++LWA+ ++GSAFLWHQVRCMVAVLF++G+GLESPD+ + LLDT 
Sbjct: 261  ITMFKISPTDVSYDGNQLWAIKIKGSAFLWHQVRCMVAVLFLVGKGLESPDITDLLLDTN 320

Query: 913  KTPRKPQYNMAPEAPLILRFCEFENLEFICSPDANRALHEHLKSEVQRYILQAAIFDEAL 1092
            + PRKPQY MA E PL+L+ CEF++++F+CS +A  ALH HL +E + Y LQAAIF EA+
Sbjct: 321  RIPRKPQYTMASEVPLVLQSCEFKDVKFMCSSEAGEALHSHLVNECKIYQLQAAIFHEAI 380

Query: 1093 NCLLPPGESS-----ESLRKGKGHMPLLLRVTEPSYEERRNKL 1206
               +PP            +K   H+PL+ R TEPSYEERR KL
Sbjct: 381  LNSVPPLHDQILPAVRESKKKASHIPLMSRPTEPSYEERRAKL 423


>gb|EMT04195.1| tRNA pseudouridine synthase 3 [Aegilops tauschii]
          Length = 704

 Score =  442 bits (1138), Expect = e-121
 Identities = 222/343 (64%), Positives = 266/343 (77%), Gaps = 1/343 (0%)
 Frame = +1

Query: 151  NSETGEEPGLQKIHHPARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMV 330
            +  TG + G   + H  +R +ALKIMYFGQRFYGFASEA  +PT+ESEIFKA+ER +L+V
Sbjct: 95   SKRTGHQVG--NVSHCQKRLIALKIMYFGQRFYGFASEAHTEPTVESEIFKAIERARLLV 152

Query: 331  GTKESSGYSRCGRTDKGVSSSGQVISLYLRSNLKDAGGNTVNQMSTLEQKCEIDYVRVLN 510
            G++E S YSRCGRTDKGVS++GQVISLYLRSNLKDAG N + + S      EIDYV VLN
Sbjct: 153  GSREDSCYSRCGRTDKGVSATGQVISLYLRSNLKDAGENILGERS------EIDYVSVLN 206

Query: 511  RVLPGDIRVVGWCPVPTDFHSRFSCLSREYRYLFWKGNLDILAMKQAAGKFIGEYDFRNF 690
            R LP DIRV+GWCPV  DF +RFSCL REY+YLFWK  LD+  M++AA KFIGE+DFRNF
Sbjct: 207  RNLPRDIRVIGWCPVAADFLARFSCLGREYKYLFWKRALDVSKMQKAAFKFIGEHDFRNF 266

Query: 691  CKMDAANVNNYRRKITFFDISLSKKRYADDELWAMTVRGSAFLWHQVRCMVAVLFMIGQG 870
            CKMDAANV+NY+R IT F+IS   +R   DELW+M +RGSAFLWHQVRCM AVLF +GQG
Sbjct: 267  CKMDAANVSNYKRYITDFNISACDQRSNHDELWSMNIRGSAFLWHQVRCMAAVLFFVGQG 326

Query: 871  LESPDVINALLDTIKTPRKPQYNMAPEAPLILRFCEFENLEFICSPDANRALHEHLKSEV 1050
            LESP V+++LLD  KTPRKPQY MAPE PLILR C F+ + F+CS DA++AL EHLK E 
Sbjct: 327  LESPCVVDSLLDITKTPRKPQYTMAPELPLILRSCLFDGVSFMCSSDASQALIEHLKDEH 386

Query: 1051 QRYILQAAIFDEALNCL-LPPGESSESLRKGKGHMPLLLRVTE 1176
             +Y+LQAAIFDEAL CL +P     E  +K + H+PLL R  E
Sbjct: 387  HQYMLQAAIFDEALTCLSIPEPNPLEHPKKKRKHIPLLSREAE 429


>ref|XP_004496407.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X1 [Cicer
            arietinum]
          Length = 428

 Score =  440 bits (1131), Expect = e-121
 Identities = 215/344 (62%), Positives = 268/344 (77%), Gaps = 8/344 (2%)
 Frame = +1

Query: 199  ARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGTKESSGYSRCGRTDK 378
            ++RYVALK+MYFG+RFYGFASEAQM PT+ESEIF+ALE  +L+VG K+ S YSRCGRTDK
Sbjct: 81   SKRYVALKVMYFGKRFYGFASEAQMQPTVESEIFQALEEARLLVGDKKESQYSRCGRTDK 140

Query: 379  GVSSSGQVISLYLRSNLKDAGGNTVNQMSTL---EQKCEIDYVRVLNRVLPGDIRVVGWC 549
            GVSS GQVI+L+LRS LK +G N  +    +   + + EIDYVRVLNRVLP DIR++GWC
Sbjct: 141  GVSSVGQVIALFLRSRLKISGVNNGSSGDIVLEEQHEGEIDYVRVLNRVLPNDIRILGWC 200

Query: 550  PVPTDFHSRFSCLSREYRYLFWKGNLDILAMKQAAGKFIGEYDFRNFCKMDAANVNNYRR 729
            PVP DFH+RFSCLSREY+Y FWK NL+ILAM+ A  KF+GE+DFRNFCKMDAANV+NY R
Sbjct: 201  PVPVDFHARFSCLSREYKYFFWKENLNILAMESAGTKFLGEHDFRNFCKMDAANVHNYMR 260

Query: 730  KITFFDISLSKKRYADDELWAMTVRGSAFLWHQVRCMVAVLFMIGQGLESPDVINALLDT 909
            +IT F IS +   Y  ++LWA+ ++GSAFLWHQVRCMVAVLF++G+GLESPD+ + LLDT
Sbjct: 261  RITMFKISPTDVSYDGNQLWAIKIKGSAFLWHQVRCMVAVLFLVGKGLESPDITDLLLDT 320

Query: 910  IKTPRKPQYNMAPEAPLILRFCEFENLEFICSPDANRALHEHLKSEVQRYILQAAIFDEA 1089
             + PRKPQY MA E PL+L+ CEF++++F+CS +A  ALH HL +E + Y LQAAIF EA
Sbjct: 321  NRIPRKPQYTMASEVPLVLQSCEFKDVKFMCSSEAGEALHSHLVNECKIYQLQAAIFHEA 380

Query: 1090 LNCLLPPGESS-----ESLRKGKGHMPLLLRVTEPSYEERRNKL 1206
            +   +PP            +K   H+PL+ R TEPSYEERR KL
Sbjct: 381  ILNSVPPLHDQILPAVRESKKKASHIPLMSRPTEPSYEERRAKL 424


>ref|XP_006473155.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like [Citrus sinensis]
          Length = 437

 Score =  439 bits (1128), Expect = e-120
 Identities = 229/414 (55%), Positives = 291/414 (70%), Gaps = 12/414 (2%)
 Frame = +1

Query: 1    KESKGDEIRNIENLEAVLGCLSDNFTASSNNSVKNGHMAITGFGEKLMLMNSETGEEPGL 180
            KE + D  + +  L     C  +      ++ V++G   +     K      +TG++   
Sbjct: 24   KELEADNAKLLSKLSL---CRCEKIEDKVHDGVEDGTTLVEE-NRKTESGGCKTGKKKVK 79

Query: 181  QK----IHHPARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGTKESS 348
            +K    ++H  +RYVALK+MYFGQRFYGFAS+  M+PT+ESEIFKALE+T+L+V  K+ S
Sbjct: 80   EKMSGTLNHHFKRYVALKVMYFGQRFYGFASDGNMEPTVESEIFKALEKTRLLVADKKES 139

Query: 349  GYSRCGRTDKGVSSSGQVISLYLRSNLKDAGGNTVNQMSTLEQKC---EIDYVRVLNRVL 519
             YSRCGRTDKGVSS GQVI++YLRSN+K+   N  +   T++++    EIDYVRVLNRVL
Sbjct: 140  HYSRCGRTDKGVSSVGQVIAIYLRSNIKECNTNNASMGETVQEEQIEDEIDYVRVLNRVL 199

Query: 520  PGDIRVVGWCPVPTDFHSRFSCLSREYRYLFWKGNLDILAMKQAAGKFIGEYDFRNFCKM 699
            P DIRV+GW P PTDF +RFSC+SREY+Y FW+ NL++ AM+ A  KF+GE+DFRNFCKM
Sbjct: 200  PKDIRVIGWSPAPTDFSARFSCISREYKYFFWRENLNLSAMESAGKKFVGEHDFRNFCKM 259

Query: 700  DAANVNNYRRKITFFDISLSKKRYADDELWAMTVRGSAFLWHQVRCMVAVLFMIGQGLES 879
            DAANV+NY+R++T F+IS     +  ++L A+ +RGSAFLWHQVRCMVAVLFMIGQGLES
Sbjct: 260  DAANVHNYKRRVTSFEISPCYISFEGNQLCAIKIRGSAFLWHQVRCMVAVLFMIGQGLES 319

Query: 880  PDVINALLDTIKTPRKPQYNMAPEAPLILRFCEFENLEFICSPDANRALHEHLKSEVQRY 1059
             DVI +LLDT   PRKPQYNMAPE PL+L+ CEFE L+F CS DA   L  HL++E Q Y
Sbjct: 320  IDVIESLLDTNGIPRKPQYNMAPEIPLVLQSCEFEGLKFTCSLDAGHDLRLHLRNECQVY 379

Query: 1060 ILQAAIFDEALNCLLPPGESSESLRKG-----KGHMPLLLRVTEPSYEERRNKL 1206
             LQAAIF EAL   LP      SLR G       H+PL  R TEP+Y+ERR KL
Sbjct: 380  QLQAAIFHEALLNCLPLANDQNSLRNGMVKKKASHIPLFSRPTEPTYKERRAKL 433