BLASTX nr result
ID: Zingiber23_contig00021403
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Zingiber23_contig00021403 (1736 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma ... 769 0.0 emb|CBI27412.3| unnamed protein product [Vitis vinifera] 765 0.0 ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 765 0.0 ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group] g... 762 0.0 gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japo... 762 0.0 gb|EAZ08263.1| hypothetical protein OsI_30516 [Oryza sativa Indi... 762 0.0 ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/... 760 0.0 ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 758 0.0 ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [S... 757 0.0 gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus pe... 757 0.0 ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 756 0.0 ref|XP_004956403.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 756 0.0 ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Popu... 752 0.0 tpg|DAA63638.1| TPA: RNA polymerase T phage-like 1 [Zea mays] 751 0.0 sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras... 749 0.0 emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum] 749 0.0 emb|CAC95022.1| mitochondrial RNA polymerase [Nicotiana tabacum] 749 0.0 ref|XP_003577161.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 748 0.0 ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 746 0.0 ref|XP_002315996.2| DNA-directed RNA polymerase family protein [... 746 0.0 >gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao] gi|508709657|gb|EOY01554.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao] Length = 996 Score = 769 bits (1986), Expect = 0.0 Identities = 364/426 (85%), Positives = 404/426 (94%) Frame = -3 Query: 1734 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 1555 PHNLDFRGRAYPMHPYLNHLGSD+CRGVLEFAEGRPLGKSGLRWLKIHLANLYA GVDKL Sbjct: 571 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 630 Query: 1554 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAEDPFQLLAVCINLAEALRSSTPENTVS 1375 S++ R+AFTENHL+D+FDSAD+PLEGRRWWL AEDPFQ LA CINL+EALRSS+PE T+S Sbjct: 631 SYEGRIAFTENHLDDIFDSADRPLEGRRWWLSAEDPFQCLAACINLSEALRSSSPETTIS 690 Query: 1374 HIPVHQDGSCNGLQHYAALGKDKLGAISVNLVAGDEPADVYSSIATRVLNIMCRDAEKGP 1195 H+PVHQDGSCNGLQHYAALG+DKLGA SVNLVAG++PADVYS IA RV++IM RDAEK P Sbjct: 691 HMPVHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPADVYSGIAARVVDIMRRDAEKDP 750 Query: 1194 SINPNALHAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDMMADDTELFRA 1015 +INP+ALHA+LLI+QVDRKLVKQTVMTSVYGVTYIGAR+QIKRRLKER +ADDTE+F A Sbjct: 751 AINPHALHARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIADDTEMFVA 810 Query: 1014 SCYAAKTTLTALGEMFQAARDIMTWLGDCAKVIASENHPVRWTTPLGLPVVQPYQKLGSH 835 SCYAA+TTLTALGEMFQAAR IM WLG+CAKVI+SEN PVRW TPLGLPVVQPY++LG H Sbjct: 811 SCYAARTTLTALGEMFQAARSIMNWLGECAKVISSENQPVRWVTPLGLPVVQPYRQLGRH 870 Query: 834 MVKTSLQVLTLRRETDKVMVRRQRTAFPPNFVHSLDGSHMMMTAVACQRAGLNFAGVHDS 655 ++KTSLQVLTL+RETDKVM +RQRTAFPPNFVHSLDGSHMMMTAVAC++AGLNFAGVHDS Sbjct: 871 LIKTSLQVLTLQRETDKVMAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDS 930 Query: 654 YWTHACDVDQMNRILREKFVELYEKPILENLLESFQQSFPTLSFPPLPERGDFNLNDVLE 475 YWTHACDVD+MNRILREKFVELYE PILENLLESFQ+SFP+L+FPPLPERGDF+L +VLE Sbjct: 931 YWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPSLNFPPLPERGDFDLREVLE 990 Query: 474 SPYFFN 457 SPYFFN Sbjct: 991 SPYFFN 996 >emb|CBI27412.3| unnamed protein product [Vitis vinifera] Length = 810 Score = 765 bits (1975), Expect = 0.0 Identities = 363/426 (85%), Positives = 400/426 (93%) Frame = -3 Query: 1734 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 1555 PHNLDFRGRAYPMHPYLNHLGSD+CRG+LEFAEGRPLGKSGLRWLKIHLAN+YA GVDKL Sbjct: 385 PHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKL 444 Query: 1554 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAEDPFQLLAVCINLAEALRSSTPENTVS 1375 S++ RVAFTENHLED+FDSAD+PLEGRRWWL AEDPFQ LA CINL+EALRSS+PE T+S Sbjct: 445 SYEGRVAFTENHLEDIFDSADRPLEGRRWWLSAEDPFQCLATCINLSEALRSSSPETTIS 504 Query: 1374 HIPVHQDGSCNGLQHYAALGKDKLGAISVNLVAGDEPADVYSSIATRVLNIMCRDAEKGP 1195 H+PVHQDGSCNGLQHYAALG+DKLGA +VNLVAG++PADVYS IA RVL+IM RDA+K P Sbjct: 505 HMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMQRDAQKDP 564 Query: 1194 SINPNALHAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDMMADDTELFRA 1015 + PNAL A+LLI QVDRKLVKQTVMTSVYGVTYIGAR+QIKRRLKER +AD+ E+F A Sbjct: 565 ATEPNALRARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIADEGEVFSA 624 Query: 1014 SCYAAKTTLTALGEMFQAARDIMTWLGDCAKVIASENHPVRWTTPLGLPVVQPYQKLGSH 835 SCYAAKTTLTALGEMF+AAR IM+WLGDCAKVIASENHPVRW TPLGLPVVQPY+KLG H Sbjct: 625 SCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASENHPVRWNTPLGLPVVQPYRKLGRH 684 Query: 834 MVKTSLQVLTLRRETDKVMVRRQRTAFPPNFVHSLDGSHMMMTAVACQRAGLNFAGVHDS 655 ++KTSLQVL+L+RETDKVMV+RQRTAFPPNFVHSLDGSHMMMTAVACQ+AGLNFAGVHDS Sbjct: 685 LIKTSLQVLSLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACQKAGLNFAGVHDS 744 Query: 654 YWTHACDVDQMNRILREKFVELYEKPILENLLESFQQSFPTLSFPPLPERGDFNLNDVLE 475 YWTHACDVD+MNRILREKFVELY PILENLLE FQ+SFPTL+FPPLPERGDF+L +VLE Sbjct: 745 YWTHACDVDEMNRILREKFVELYGMPILENLLEGFQKSFPTLNFPPLPERGDFDLREVLE 804 Query: 474 SPYFFN 457 SPYFFN Sbjct: 805 SPYFFN 810 >ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis vinifera] Length = 978 Score = 765 bits (1975), Expect = 0.0 Identities = 363/426 (85%), Positives = 400/426 (93%) Frame = -3 Query: 1734 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 1555 PHNLDFRGRAYPMHPYLNHLGSD+CRG+LEFAEGRPLGKSGLRWLKIHLAN+YA GVDKL Sbjct: 553 PHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKL 612 Query: 1554 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAEDPFQLLAVCINLAEALRSSTPENTVS 1375 S++ RVAFTENHLED+FDSAD+PLEGRRWWL AEDPFQ LA CINL+EALRSS+PE T+S Sbjct: 613 SYEGRVAFTENHLEDIFDSADRPLEGRRWWLSAEDPFQCLATCINLSEALRSSSPETTIS 672 Query: 1374 HIPVHQDGSCNGLQHYAALGKDKLGAISVNLVAGDEPADVYSSIATRVLNIMCRDAEKGP 1195 H+PVHQDGSCNGLQHYAALG+DKLGA +VNLVAG++PADVYS IA RVL+IM RDA+K P Sbjct: 673 HMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMQRDAQKDP 732 Query: 1194 SINPNALHAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDMMADDTELFRA 1015 + PNAL A+LLI QVDRKLVKQTVMTSVYGVTYIGAR+QIKRRLKER +AD+ E+F A Sbjct: 733 ATEPNALRARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIADEGEVFSA 792 Query: 1014 SCYAAKTTLTALGEMFQAARDIMTWLGDCAKVIASENHPVRWTTPLGLPVVQPYQKLGSH 835 SCYAAKTTLTALGEMF+AAR IM+WLGDCAKVIASENHPVRW TPLGLPVVQPY+KLG H Sbjct: 793 SCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASENHPVRWNTPLGLPVVQPYRKLGRH 852 Query: 834 MVKTSLQVLTLRRETDKVMVRRQRTAFPPNFVHSLDGSHMMMTAVACQRAGLNFAGVHDS 655 ++KTSLQVL+L+RETDKVMV+RQRTAFPPNFVHSLDGSHMMMTAVACQ+AGLNFAGVHDS Sbjct: 853 LIKTSLQVLSLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACQKAGLNFAGVHDS 912 Query: 654 YWTHACDVDQMNRILREKFVELYEKPILENLLESFQQSFPTLSFPPLPERGDFNLNDVLE 475 YWTHACDVD+MNRILREKFVELY PILENLLE FQ+SFPTL+FPPLPERGDF+L +VLE Sbjct: 913 YWTHACDVDEMNRILREKFVELYGMPILENLLEGFQKSFPTLNFPPLPERGDFDLREVLE 972 Query: 474 SPYFFN 457 SPYFFN Sbjct: 973 SPYFFN 978 >ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group] gi|30698494|dbj|BAC76604.1| RpoT1 [Oryza sativa Japonica Group] gi|37360973|dbj|BAC98395.1| T7 bacteriophage-type single subunit RNA polymerase [Oryza sativa Japonica Group] gi|113630892|dbj|BAF24573.1| Os09g0246200 [Oryza sativa Japonica Group] Length = 1017 Score = 762 bits (1967), Expect = 0.0 Identities = 362/426 (84%), Positives = 395/426 (92%) Frame = -3 Query: 1734 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 1555 PHNLDFRGRAYPMHPYLNHLGSD+CRGVLEFAEGRPLGKSGLRWLKIHLANLYA GVDKL Sbjct: 592 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 651 Query: 1554 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAEDPFQLLAVCINLAEALRSSTPENTVS 1375 S+D R+AFTENHLED+FDSAD+PLEG+RWWLGAEDPFQ LAVCINL EALRS +PE +S Sbjct: 652 SYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMIS 711 Query: 1374 HIPVHQDGSCNGLQHYAALGKDKLGAISVNLVAGDEPADVYSSIATRVLNIMCRDAEKGP 1195 HIPVHQDGSCNGLQHYAALG+DKLGAI+VNLVAG++PADVY+ IATRV+ IM DA K P Sbjct: 712 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKDP 771 Query: 1194 SINPNALHAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDMMADDTELFRA 1015 + +P+A A+LL+DQVDRKLVKQTVMTSVYGVTY+GAREQIKRRLKERDM+ DD+ELF A Sbjct: 772 ATDPDAARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFSA 831 Query: 1014 SCYAAKTTLTALGEMFQAARDIMTWLGDCAKVIASENHPVRWTTPLGLPVVQPYQKLGSH 835 SCYAAK TLTALGEMFQAAR IM WLGDCAKVIA EN PVRWTTPLGLPVVQPY+KLG H Sbjct: 832 SCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRH 891 Query: 834 MVKTSLQVLTLRRETDKVMVRRQRTAFPPNFVHSLDGSHMMMTAVACQRAGLNFAGVHDS 655 ++KTSLQVLTL+RETDKVMV+RQRTAFPPNFVHSLDGSHMMMTAVAC+R GLNFAGVHDS Sbjct: 892 LIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDS 951 Query: 654 YWTHACDVDQMNRILREKFVELYEKPILENLLESFQQSFPTLSFPPLPERGDFNLNDVLE 475 YWTHACDVD MN+ILREKFVELY+ PILENLLESF++SFP L FPPLPERGDF+L DVL Sbjct: 952 YWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPELKFPPLPERGDFDLTDVLG 1011 Query: 474 SPYFFN 457 SPYFFN Sbjct: 1012 SPYFFN 1017 >gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japonica Group] Length = 983 Score = 762 bits (1967), Expect = 0.0 Identities = 362/426 (84%), Positives = 395/426 (92%) Frame = -3 Query: 1734 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 1555 PHNLDFRGRAYPMHPYLNHLGSD+CRGVLEFAEGRPLGKSGLRWLKIHLANLYA GVDKL Sbjct: 558 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 617 Query: 1554 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAEDPFQLLAVCINLAEALRSSTPENTVS 1375 S+D R+AFTENHLED+FDSAD+PLEG+RWWLGAEDPFQ LAVCINL EALRS +PE +S Sbjct: 618 SYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMIS 677 Query: 1374 HIPVHQDGSCNGLQHYAALGKDKLGAISVNLVAGDEPADVYSSIATRVLNIMCRDAEKGP 1195 HIPVHQDGSCNGLQHYAALG+DKLGAI+VNLVAG++PADVY+ IATRV+ IM DA K P Sbjct: 678 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKDP 737 Query: 1194 SINPNALHAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDMMADDTELFRA 1015 + +P+A A+LL+DQVDRKLVKQTVMTSVYGVTY+GAREQIKRRLKERDM+ DD+ELF A Sbjct: 738 ATDPDAARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFSA 797 Query: 1014 SCYAAKTTLTALGEMFQAARDIMTWLGDCAKVIASENHPVRWTTPLGLPVVQPYQKLGSH 835 SCYAAK TLTALGEMFQAAR IM WLGDCAKVIA EN PVRWTTPLGLPVVQPY+KLG H Sbjct: 798 SCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRH 857 Query: 834 MVKTSLQVLTLRRETDKVMVRRQRTAFPPNFVHSLDGSHMMMTAVACQRAGLNFAGVHDS 655 ++KTSLQVLTL+RETDKVMV+RQRTAFPPNFVHSLDGSHMMMTAVAC+R GLNFAGVHDS Sbjct: 858 LIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDS 917 Query: 654 YWTHACDVDQMNRILREKFVELYEKPILENLLESFQQSFPTLSFPPLPERGDFNLNDVLE 475 YWTHACDVD MN+ILREKFVELY+ PILENLLESF++SFP L FPPLPERGDF+L DVL Sbjct: 918 YWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPELKFPPLPERGDFDLTDVLG 977 Query: 474 SPYFFN 457 SPYFFN Sbjct: 978 SPYFFN 983 >gb|EAZ08263.1| hypothetical protein OsI_30516 [Oryza sativa Indica Group] Length = 845 Score = 762 bits (1967), Expect = 0.0 Identities = 362/426 (84%), Positives = 395/426 (92%) Frame = -3 Query: 1734 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 1555 PHNLDFRGRAYPMHPYLNHLGSD+CRGVLEFAEGRPLGKSGLRWLKIHLANLYA GVDKL Sbjct: 420 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 479 Query: 1554 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAEDPFQLLAVCINLAEALRSSTPENTVS 1375 S+D R+AFTENHLED+FDSAD+PLEG+RWWLGAEDPFQ LAVCINL EALRS +PE +S Sbjct: 480 SYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMIS 539 Query: 1374 HIPVHQDGSCNGLQHYAALGKDKLGAISVNLVAGDEPADVYSSIATRVLNIMCRDAEKGP 1195 HIPVHQDGSCNGLQHYAALG+DKLGAI+VNLVAG++PADVY+ IATRV+ IM DA K P Sbjct: 540 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKDP 599 Query: 1194 SINPNALHAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDMMADDTELFRA 1015 + +P+A A+LL+DQVDRKLVKQTVMTSVYGVTY+GAREQIKRRLKERDM+ DD+ELF A Sbjct: 600 ATDPDAARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFSA 659 Query: 1014 SCYAAKTTLTALGEMFQAARDIMTWLGDCAKVIASENHPVRWTTPLGLPVVQPYQKLGSH 835 SCYAAK TLTALGEMFQAAR IM WLGDCAKVIA EN PVRWTTPLGLPVVQPY+KLG H Sbjct: 660 SCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRH 719 Query: 834 MVKTSLQVLTLRRETDKVMVRRQRTAFPPNFVHSLDGSHMMMTAVACQRAGLNFAGVHDS 655 ++KTSLQVLTL+RETDKVMV+RQRTAFPPNFVHSLDGSHMMMTAVAC+R GLNFAGVHDS Sbjct: 720 LIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDS 779 Query: 654 YWTHACDVDQMNRILREKFVELYEKPILENLLESFQQSFPTLSFPPLPERGDFNLNDVLE 475 YWTHACDVD MN+ILREKFVELY+ PILENLLESF++SFP L FPPLPERGDF+L DVL Sbjct: 780 YWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPELKFPPLPERGDFDLTDVLG 839 Query: 474 SPYFFN 457 SPYFFN Sbjct: 840 SPYFFN 845 >ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/mitochondrial precursor, putative [Ricinus communis] gi|223526524|gb|EEF28786.1| DNA-directed RNA polymerase 2B, chloroplast/mitochondrial precursor, putative [Ricinus communis] Length = 589 Score = 760 bits (1962), Expect = 0.0 Identities = 356/426 (83%), Positives = 399/426 (93%) Frame = -3 Query: 1734 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 1555 PHNLDFRGRAYPMHPYLNHLGSD+CRG+LEFAEGRPLGKSGLRWLKIHLANL+A GVDKL Sbjct: 164 PHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAGGVDKL 223 Query: 1554 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAEDPFQLLAVCINLAEALRSSTPENTVS 1375 S+D R+AFTENHL+D+FDSAD+PLEG+RWWL AEDPFQ LAVCI+L EALRSS+PE +S Sbjct: 224 SYDGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQCLAVCIDLTEALRSSSPETFIS 283 Query: 1374 HIPVHQDGSCNGLQHYAALGKDKLGAISVNLVAGDEPADVYSSIATRVLNIMCRDAEKGP 1195 H+P+HQDGSCNGLQHYAALG+DKLGA +VNLVAG++PADVYS IA RVL+IM +DA+K P Sbjct: 284 HVPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAVRVLDIMRKDAQKDP 343 Query: 1194 SINPNALHAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDMMADDTELFRA 1015 + P+ALHAK+LI QVDRKLVKQTVMTSVYGVTYIGAR+QIKRRLKER +ADDTE+F A Sbjct: 344 KVFPDALHAKILISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIADDTEIFVA 403 Query: 1014 SCYAAKTTLTALGEMFQAARDIMTWLGDCAKVIASENHPVRWTTPLGLPVVQPYQKLGSH 835 SCYAAK TLTALGEMF+AAR IM+WLG+CAK+IASEN PVRWTTPLGLPVVQPY+ G H Sbjct: 404 SCYAAKVTLTALGEMFEAARSIMSWLGECAKIIASENEPVRWTTPLGLPVVQPYRNFGRH 463 Query: 834 MVKTSLQVLTLRRETDKVMVRRQRTAFPPNFVHSLDGSHMMMTAVACQRAGLNFAGVHDS 655 ++KTSLQVLTL++ET+KVMV+RQRTAFPPNFVHSLDGSHMMMTAV C+RAGLNFAGVHDS Sbjct: 464 LIKTSLQVLTLQQETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVTCKRAGLNFAGVHDS 523 Query: 654 YWTHACDVDQMNRILREKFVELYEKPILENLLESFQQSFPTLSFPPLPERGDFNLNDVLE 475 YWTHACDVD+MNRILREKFVELYE P+LENLLESFQQSFPTLSFPPLPERGDF+L DVL+ Sbjct: 524 YWTHACDVDKMNRILREKFVELYETPVLENLLESFQQSFPTLSFPPLPERGDFDLQDVLK 583 Query: 474 SPYFFN 457 SPYFFN Sbjct: 584 SPYFFN 589 >ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like isoform X2 [Oryza brachyantha] Length = 839 Score = 758 bits (1958), Expect = 0.0 Identities = 359/426 (84%), Positives = 394/426 (92%) Frame = -3 Query: 1734 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 1555 PHNLDFRGRAYPMHPYLNHLGSD+CRGVLEFAEGRPLGKSGLRWLKIHLANLYA GVDKL Sbjct: 414 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 473 Query: 1554 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAEDPFQLLAVCINLAEALRSSTPENTVS 1375 S+D R+AFTENHLED+FDSAD+PLEG+RWWLGAEDPFQ LAVCINL EALRS +PE +S Sbjct: 474 SYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMIS 533 Query: 1374 HIPVHQDGSCNGLQHYAALGKDKLGAISVNLVAGDEPADVYSSIATRVLNIMCRDAEKGP 1195 HIPVHQDGSCNGLQHYAALG+DKLGAI+VNLVAG++PADVY+ IATRVL IM DA K P Sbjct: 534 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVLEIMRNDALKDP 593 Query: 1194 SINPNALHAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDMMADDTELFRA 1015 + +P+A A++L+DQVDRKLVKQTVMTSVYGVTY+GAREQIKRRLKERDM+ DD+ELF A Sbjct: 594 ATDPDAARARMLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMIGDDSELFSA 653 Query: 1014 SCYAAKTTLTALGEMFQAARDIMTWLGDCAKVIASENHPVRWTTPLGLPVVQPYQKLGSH 835 SCYAAK TLTALGEMFQAAR IM WLGDCAK+IA EN PV+WTTPLGLPVVQPY+KLG H Sbjct: 654 SCYAAKVTLTALGEMFQAARSIMNWLGDCAKIIACENEPVKWTTPLGLPVVQPYRKLGRH 713 Query: 834 MVKTSLQVLTLRRETDKVMVRRQRTAFPPNFVHSLDGSHMMMTAVACQRAGLNFAGVHDS 655 ++KTSLQVLTL+RETDKVMV+RQRTAFPPNFVHSLDGSHMMMTAVAC+R GLNFAGVHDS Sbjct: 714 LIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDS 773 Query: 654 YWTHACDVDQMNRILREKFVELYEKPILENLLESFQQSFPTLSFPPLPERGDFNLNDVLE 475 YWTHACDVD MN+ILREKFVELY+ PILENLL SF++SFP L FPPLPERGDF+L DVL Sbjct: 774 YWTHACDVDTMNKILREKFVELYDTPILENLLGSFEKSFPELKFPPLPERGDFDLKDVLG 833 Query: 474 SPYFFN 457 SPYFFN Sbjct: 834 SPYFFN 839 >ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [Sorghum bicolor] gi|241924412|gb|EER97556.1| hypothetical protein SORBIDRAFT_02g039520 [Sorghum bicolor] Length = 976 Score = 757 bits (1955), Expect = 0.0 Identities = 357/426 (83%), Positives = 396/426 (92%) Frame = -3 Query: 1734 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 1555 PHNLDFRGRAYPMHPYLNHLGSD+CRG+LEFAEGRPLGKSGL WLKIHLANLYA GVDKL Sbjct: 551 PHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYAGGVDKL 610 Query: 1554 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAEDPFQLLAVCINLAEALRSSTPENTVS 1375 S+D RVAFTENHLE++FDSAD+PLEG+RWWLGAEDPFQ LAVC+NL EALRSS+PE T+S Sbjct: 611 SYDGRVAFTENHLEEIFDSADRPLEGKRWWLGAEDPFQCLAVCMNLTEALRSSSPETTIS 670 Query: 1374 HIPVHQDGSCNGLQHYAALGKDKLGAISVNLVAGDEPADVYSSIATRVLNIMCRDAEKGP 1195 HIPVHQDGSCNGLQHYAALG+DKLGAI+VNLVAG++PADVY+ IATRVL IM DA+K P Sbjct: 671 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVLEIMRMDAQKDP 730 Query: 1194 SINPNALHAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDMMADDTELFRA 1015 SI+P+ A+L++DQVDRKLVKQTVMTSVYGVTY+GAR+QIKRRLKER ++ D+ ELF A Sbjct: 731 SIDPDVARARLIVDQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGVIPDEAELFGA 790 Query: 1014 SCYAAKTTLTALGEMFQAARDIMTWLGDCAKVIASENHPVRWTTPLGLPVVQPYQKLGSH 835 SCYAAK TLTALGEMFQAAR IM WLGDCAKVIA EN PVRWTTPLGLPVVQPY+KLG H Sbjct: 791 SCYAAKVTLTALGEMFQAARGIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRH 850 Query: 834 MVKTSLQVLTLRRETDKVMVRRQRTAFPPNFVHSLDGSHMMMTAVACQRAGLNFAGVHDS 655 ++KTSLQVLTL+RETDKVMV+RQRTAFPPNFVHSLDGSHMMMTAVAC+R GLNFAGVHDS Sbjct: 851 LIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDS 910 Query: 654 YWTHACDVDQMNRILREKFVELYEKPILENLLESFQQSFPTLSFPPLPERGDFNLNDVLE 475 YWTHACDVD MN+ILREKFVELY+ PILENLLESF++SFP L FPPLPERGDF++ +VLE Sbjct: 911 YWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPKLKFPPLPERGDFDMKEVLE 970 Query: 474 SPYFFN 457 SPYFFN Sbjct: 971 SPYFFN 976 >gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica] Length = 1006 Score = 757 bits (1954), Expect = 0.0 Identities = 357/426 (83%), Positives = 397/426 (93%) Frame = -3 Query: 1734 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 1555 PHNLDFRGRAYPMHPYLNHLGSD+CRG+LEF+EGR LGKSGLRWLKIHLANLYA GVDKL Sbjct: 581 PHNLDFRGRAYPMHPYLNHLGSDMCRGILEFSEGRHLGKSGLRWLKIHLANLYAGGVDKL 640 Query: 1554 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAEDPFQLLAVCINLAEALRSSTPENTVS 1375 S D R AFTENH++++FDSAD+PLEGRRWWLGAEDPFQ LA CINL EALRS +PE T+S Sbjct: 641 SFDDRAAFTENHVDEIFDSADRPLEGRRWWLGAEDPFQCLAACINLCEALRSPSPETTIS 700 Query: 1374 HIPVHQDGSCNGLQHYAALGKDKLGAISVNLVAGDEPADVYSSIATRVLNIMCRDAEKGP 1195 ++PVHQDGSCNGLQHYAALG+DKLGA +VNLV GD+PADVYS IA RVL+IM DAEK P Sbjct: 701 YMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGDKPADVYSGIAARVLDIMRNDAEKDP 760 Query: 1194 SINPNALHAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDMMADDTELFRA 1015 + NPNALHA+LLI+QVDRKLVKQTVMTSVYGVTY+GAR+QIKRRLKER +ADDT LF A Sbjct: 761 ATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGSIADDTALFAA 820 Query: 1014 SCYAAKTTLTALGEMFQAARDIMTWLGDCAKVIASENHPVRWTTPLGLPVVQPYQKLGSH 835 +CYAA+TTLTALGEMF+AAR IM+WLG+CAKVIASEN PVRW TPLGLPVVQPY++LG H Sbjct: 821 ACYAARTTLTALGEMFEAARSIMSWLGECAKVIASENQPVRWITPLGLPVVQPYRQLGRH 880 Query: 834 MVKTSLQVLTLRRETDKVMVRRQRTAFPPNFVHSLDGSHMMMTAVACQRAGLNFAGVHDS 655 ++KTSLQVLTL+RETDKVMV+RQRTAFPPNFVHSLDGSHMMMTAVAC++AGLNFAGVHDS Sbjct: 881 LIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDS 940 Query: 654 YWTHACDVDQMNRILREKFVELYEKPILENLLESFQQSFPTLSFPPLPERGDFNLNDVLE 475 YWTHACD+D+MNRILREKFVELYE PILENLLE FQQSFPTL+FPPLP+RGDF+L DVLE Sbjct: 941 YWTHACDIDEMNRILREKFVELYEAPILENLLEGFQQSFPTLTFPPLPDRGDFDLRDVLE 1000 Query: 474 SPYFFN 457 SPYFFN Sbjct: 1001 SPYFFN 1006 >ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial [Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed protein product [Vitis vinifera] Length = 1035 Score = 756 bits (1952), Expect = 0.0 Identities = 354/426 (83%), Positives = 398/426 (93%) Frame = -3 Query: 1734 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 1555 PHNLDFRGRAYPMHPYLNHLGSD+CRG+LEFAEGRPLG SGL WLKIHLANL+A GVDKL Sbjct: 610 PHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGSSGLHWLKIHLANLFAGGVDKL 669 Query: 1554 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAEDPFQLLAVCINLAEALRSSTPENTVS 1375 SH+ R+ FTENHL+D+FDSAD+PLEG+RWWL AEDPFQ LA CINL+EALRSS+PE T+S Sbjct: 670 SHEGRITFTENHLDDIFDSADRPLEGKRWWLNAEDPFQFLAACINLSEALRSSSPETTIS 729 Query: 1374 HIPVHQDGSCNGLQHYAALGKDKLGAISVNLVAGDEPADVYSSIATRVLNIMCRDAEKGP 1195 HIPVHQDGSCNGLQHYAALG+D+LGA +VNLVAG++PADVYS IA RVL+IM RDAEK P Sbjct: 730 HIPVHQDGSCNGLQHYAALGRDQLGATAVNLVAGEKPADVYSGIAARVLDIMKRDAEKDP 789 Query: 1194 SINPNALHAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDMMADDTELFRA 1015 +I P+AL A++LI+QVDRKLVKQTVMTSVYGVTYIGAR+QIKRRLKER+ +ADD ELF A Sbjct: 790 AIFPDALRARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNAIADDVELFGA 849 Query: 1014 SCYAAKTTLTALGEMFQAARDIMTWLGDCAKVIASENHPVRWTTPLGLPVVQPYQKLGSH 835 +CYAAK TLTALGEMFQAAR IM+WLGDCAK+IASEN PVRWTTPLGLPVVQPY+KLG H Sbjct: 850 ACYAAKITLTALGEMFQAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRH 909 Query: 834 MVKTSLQVLTLRRETDKVMVRRQRTAFPPNFVHSLDGSHMMMTAVACQRAGLNFAGVHDS 655 ++KTSLQVLTL+RET+ +MV+RQRTAFPPNFVHSLDGSHMMMTA+AC++AGLNFAGVHDS Sbjct: 910 LIKTSLQVLTLQRETETIMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLNFAGVHDS 969 Query: 654 YWTHACDVDQMNRILREKFVELYEKPILENLLESFQQSFPTLSFPPLPERGDFNLNDVLE 475 YWTHACDVD+MNR+LREKFV+LYE PILENLLESFQQSFP L FPPLPERGDF+L +VLE Sbjct: 970 YWTHACDVDEMNRLLREKFVQLYETPILENLLESFQQSFPALEFPPLPERGDFDLREVLE 1029 Query: 474 SPYFFN 457 SPYFFN Sbjct: 1030 SPYFFN 1035 >ref|XP_004956403.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like [Setaria italica] Length = 1005 Score = 756 bits (1951), Expect = 0.0 Identities = 357/426 (83%), Positives = 396/426 (92%) Frame = -3 Query: 1734 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 1555 PHNLDFRGRAYPMHPYLNHLGSD+CRGVLEFAEGRPLG+SGLRWLKIHLANLYA GVDKL Sbjct: 580 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGESGLRWLKIHLANLYAGGVDKL 639 Query: 1554 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAEDPFQLLAVCINLAEALRSSTPENTVS 1375 S+ R+AF ENHLE++FDSAD+PLEG+RWWLGAEDPFQ LAVC+NL EALRS +PE T+S Sbjct: 640 SYAGRIAFAENHLEEIFDSADRPLEGKRWWLGAEDPFQCLAVCMNLTEALRSPSPEATIS 699 Query: 1374 HIPVHQDGSCNGLQHYAALGKDKLGAISVNLVAGDEPADVYSSIATRVLNIMCRDAEKGP 1195 HIPVHQDGSCNGLQHYAALG+DKLGAI+VNLVAG++PADVYS IATRV+ IM RD++K P Sbjct: 700 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYSGIATRVVEIMRRDSQKDP 759 Query: 1194 SINPNALHAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDMMADDTELFRA 1015 S +P+A A+L++DQVDRKLVKQTVMTSVYGVTY+GAREQIKRRLKER ++ADD ELF A Sbjct: 760 STDPDAARARLILDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGVIADDAELFGA 819 Query: 1014 SCYAAKTTLTALGEMFQAARDIMTWLGDCAKVIASENHPVRWTTPLGLPVVQPYQKLGSH 835 SCYAAK TLTALGEMFQAAR IM WLGDCAKVIA EN PV+WTTPLGLPVVQPY+KLG H Sbjct: 820 SCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVKWTTPLGLPVVQPYRKLGRH 879 Query: 834 MVKTSLQVLTLRRETDKVMVRRQRTAFPPNFVHSLDGSHMMMTAVACQRAGLNFAGVHDS 655 ++KTSLQVLTL+RETDKVMV+RQRTAFPPNFVHSLDGSHMMMTAVAC+R GLNFAGVHDS Sbjct: 880 LIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDS 939 Query: 654 YWTHACDVDQMNRILREKFVELYEKPILENLLESFQQSFPTLSFPPLPERGDFNLNDVLE 475 YWTHACDVD MN+ILREKFVELY+ PILENLLESF++SFP L FPPLPERGDF++ DVLE Sbjct: 940 YWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPKLKFPPLPERGDFDMKDVLE 999 Query: 474 SPYFFN 457 SPYFFN Sbjct: 1000 SPYFFN 1005 >ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Populus trichocarpa] gi|550332836|gb|EEE88785.2| hypothetical protein POPTR_0008s11200g [Populus trichocarpa] Length = 988 Score = 752 bits (1941), Expect = 0.0 Identities = 356/426 (83%), Positives = 393/426 (92%) Frame = -3 Query: 1734 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 1555 PHNLDFRGRAYPMHPYLNHLGSD+CRG+LEFAEGRPLGKSGLRWLKIHLANLYA GVDKL Sbjct: 563 PHNLDFRGRAYPMHPYLNHLGSDVCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 622 Query: 1554 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAEDPFQLLAVCINLAEALRSSTPENTVS 1375 S+D R++FTENHL+D+FDSAD+PLEGRRWWLGAEDPFQ LA CINL+EALRS +PE S Sbjct: 623 SYDGRISFTENHLDDIFDSADQPLEGRRWWLGAEDPFQCLAACINLSEALRSPSPETATS 682 Query: 1374 HIPVHQDGSCNGLQHYAALGKDKLGAISVNLVAGDEPADVYSSIATRVLNIMCRDAEKGP 1195 H PVHQDGSCNGLQHYAALG+DKLGA +VNLV G++PADVYS IATRVL+IM RDAEK P Sbjct: 683 HTPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGEKPADVYSGIATRVLDIMQRDAEKDP 742 Query: 1194 SINPNALHAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDMMADDTELFRA 1015 +INPN++HAKLL++QVDRKLVKQTVMTSVYGVTYIGAR+QIKRRLKER ++ADD +L+ A Sbjct: 743 AINPNSVHAKLLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCIIADDPQLYSA 802 Query: 1014 SCYAAKTTLTALGEMFQAARDIMTWLGDCAKVIASENHPVRWTTPLGLPVVQPYQKLGSH 835 +CYAAKTTL AL EMF+ AR IM WLG+CAKVIASEN PVRWTTPLGLPVVQPY++LG H Sbjct: 803 ACYAAKTTLMALEEMFEGARGIMAWLGECAKVIASENQPVRWTTPLGLPVVQPYRQLGRH 862 Query: 834 MVKTSLQVLTLRRETDKVMVRRQRTAFPPNFVHSLDGSHMMMTAVACQRAGLNFAGVHDS 655 ++KTSLQVLTL+RETDKVMV+RQRTAFPPNFVHSLDGSHMMMTAVAC+ AGLNFAGVHDS Sbjct: 863 LIKTSLQVLTLKRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKEAGLNFAGVHDS 922 Query: 654 YWTHACDVDQMNRILREKFVELYEKPILENLLESFQQSFPTLSFPPLPERGDFNLNDVLE 475 YWTHACDVD+MNRILREKFVELYE PILENLLESFQ SFP L FPPLPERG F+L DVL Sbjct: 923 YWTHACDVDEMNRILREKFVELYEAPILENLLESFQSSFPNLKFPPLPERGVFDLKDVLR 982 Query: 474 SPYFFN 457 S YFFN Sbjct: 983 STYFFN 988 >tpg|DAA63638.1| TPA: RNA polymerase T phage-like 1 [Zea mays] Length = 975 Score = 751 bits (1938), Expect = 0.0 Identities = 356/426 (83%), Positives = 394/426 (92%) Frame = -3 Query: 1734 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 1555 PHNLDFRGRAYPMHPYLNHLGSD+CRGVLEFAEGRPLGKSGLRWLKIHLANLYA GVDKL Sbjct: 550 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAAGVDKL 609 Query: 1554 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAEDPFQLLAVCINLAEALRSSTPENTVS 1375 S+D R+AF ENHLE++FDSAD+PLEGRRWWLGAEDPFQ LAVC+NL EALRSS+PE T+S Sbjct: 610 SYDGRIAFAENHLEEIFDSADRPLEGRRWWLGAEDPFQCLAVCMNLTEALRSSSPETTIS 669 Query: 1374 HIPVHQDGSCNGLQHYAALGKDKLGAISVNLVAGDEPADVYSSIATRVLNIMCRDAEKGP 1195 HIPVHQDGSCNGLQHYAALGKDKLGAI+VNLVAG++PADVY+ IA RV+ IM DA+K P Sbjct: 670 HIPVHQDGSCNGLQHYAALGKDKLGAIAVNLVAGEKPADVYTGIANRVMEIMRMDAQKDP 729 Query: 1194 SINPNALHAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDMMADDTELFRA 1015 S+ P+A A+L++DQVDRKLVKQTVMTSVYGVTYIGAREQI+RRLKER ++ +D+ELF A Sbjct: 730 SVEPDAARARLIVDQVDRKLVKQTVMTSVYGVTYIGAREQIRRRLKERGVIPNDSELFGA 789 Query: 1014 SCYAAKTTLTALGEMFQAARDIMTWLGDCAKVIASENHPVRWTTPLGLPVVQPYQKLGSH 835 SCYAAK TLTALGEMFQAAR IM WLGDCAKVIA EN PVRWTTPLGLPVVQPY+KLG H Sbjct: 790 SCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRH 849 Query: 834 MVKTSLQVLTLRRETDKVMVRRQRTAFPPNFVHSLDGSHMMMTAVACQRAGLNFAGVHDS 655 ++KTSLQVLTL+RETDKVMV+RQRTAFPPNFVHSLDGSHMMMTAVAC+R GLNFAGVHDS Sbjct: 850 LIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDS 909 Query: 654 YWTHACDVDQMNRILREKFVELYEKPILENLLESFQQSFPTLSFPPLPERGDFNLNDVLE 475 YWTHA DVD MN+ILREKFVELY+ PILENLLESF++SFP L FPPLPERGDF++ +VLE Sbjct: 910 YWTHASDVDTMNKILREKFVELYDTPILENLLESFEKSFPKLKFPPLPERGDFDMKEVLE 969 Query: 474 SPYFFN 457 S YFFN Sbjct: 970 STYFFN 975 >sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName: Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type single subunit RNA polymerase 1B; Flags: Precursor Length = 1002 Score = 749 bits (1933), Expect = 0.0 Identities = 349/426 (81%), Positives = 396/426 (92%) Frame = -3 Query: 1734 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 1555 PHNLDFRGRAYPMHPYLNHLGSD+CRG+LEFAEGRPLG SGLRWLKIHLAN+Y GVDKL Sbjct: 577 PHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKL 636 Query: 1554 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAEDPFQLLAVCINLAEALRSSTPENTVS 1375 S++ RVAF+ENHLED+FDSA++PLEG+RWWLGAEDPFQ LA CIN+AEALRS +PE +S Sbjct: 637 SYEGRVAFSENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAIS 696 Query: 1374 HIPVHQDGSCNGLQHYAALGKDKLGAISVNLVAGDEPADVYSSIATRVLNIMCRDAEKGP 1195 ++P+HQDGSCNGLQHYAALG+DKLGA +VNLVAGD+PADVYS IA RVL+IM RDA K P Sbjct: 697 YMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDP 756 Query: 1194 SINPNALHAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDMMADDTELFRA 1015 + +PN + A+LLI+QVDRKLVKQTVMTSVYGVTYIGAR+QIK+RLKER ++ DD ELF A Sbjct: 757 ANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAA 816 Query: 1014 SCYAAKTTLTALGEMFQAARDIMTWLGDCAKVIASENHPVRWTTPLGLPVVQPYQKLGSH 835 +CYAAKTTLTALGEMF+AAR IM+WLGDCAK+IA ENHPVRWTTPLGLPVVQPY+KLG H Sbjct: 817 ACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRH 876 Query: 834 MVKTSLQVLTLRRETDKVMVRRQRTAFPPNFVHSLDGSHMMMTAVACQRAGLNFAGVHDS 655 ++KTSLQ+LTL+RETDKVMV+RQRTAFPPNFVHSLDGSHMMMTA+AC+ +GL+FAGVHDS Sbjct: 877 LIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDS 936 Query: 654 YWTHACDVDQMNRILREKFVELYEKPILENLLESFQQSFPTLSFPPLPERGDFNLNDVLE 475 YWTHACDVDQMN+ILREKFVELY+ PILENLLESFQQSFP L FPPLPERGDF+L +VLE Sbjct: 937 YWTHACDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLE 996 Query: 474 SPYFFN 457 SPYFFN Sbjct: 997 SPYFFN 1002 >emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum] Length = 1002 Score = 749 bits (1933), Expect = 0.0 Identities = 349/426 (81%), Positives = 396/426 (92%) Frame = -3 Query: 1734 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 1555 PHNLDFRGRAYPMHPYLNHLGSD+CRG+LEFAEGRPLG SGLRWLKIHLAN+Y GVDKL Sbjct: 577 PHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKL 636 Query: 1554 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAEDPFQLLAVCINLAEALRSSTPENTVS 1375 S++ RVAF+ENHLED+FDSA++PLEG+RWWLGAEDPFQ LA CIN+AEALRS +PE +S Sbjct: 637 SYEGRVAFSENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAIS 696 Query: 1374 HIPVHQDGSCNGLQHYAALGKDKLGAISVNLVAGDEPADVYSSIATRVLNIMCRDAEKGP 1195 ++P+HQDGSCNGLQHYAALG+DKLGA +VNLVAGD+PADVYS IA RVL+IM RDA K P Sbjct: 697 YMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDP 756 Query: 1194 SINPNALHAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDMMADDTELFRA 1015 + +PN + A+LLI+QVDRKLVKQTVMTSVYGVTYIGAR+QIK+RLKER ++ DD ELF A Sbjct: 757 ANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAA 816 Query: 1014 SCYAAKTTLTALGEMFQAARDIMTWLGDCAKVIASENHPVRWTTPLGLPVVQPYQKLGSH 835 +CYAAKTTLTALGEMF+AAR IM+WLGDCAK+IA ENHPVRWTTPLGLPVVQPY+KLG H Sbjct: 817 ACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRH 876 Query: 834 MVKTSLQVLTLRRETDKVMVRRQRTAFPPNFVHSLDGSHMMMTAVACQRAGLNFAGVHDS 655 ++KTSLQ+LTL+RETDKVMV+RQRTAFPPNFVHSLDGSHMMMTA+AC+ +GL+FAGVHDS Sbjct: 877 LIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDS 936 Query: 654 YWTHACDVDQMNRILREKFVELYEKPILENLLESFQQSFPTLSFPPLPERGDFNLNDVLE 475 YWTHACDVDQMN+ILREKFVELY+ PILENLLESFQQSFP L FPPLPERGDF+L +VLE Sbjct: 937 YWTHACDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLE 996 Query: 474 SPYFFN 457 SPYFFN Sbjct: 997 SPYFFN 1002 >emb|CAC95022.1| mitochondrial RNA polymerase [Nicotiana tabacum] Length = 715 Score = 749 bits (1933), Expect = 0.0 Identities = 349/426 (81%), Positives = 396/426 (92%) Frame = -3 Query: 1734 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 1555 PHNLDFRGRAYPMHPYLNHLGSD+CRG+LEFAEGRPLG SGLRWLKIHLAN+Y GVDKL Sbjct: 290 PHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKL 349 Query: 1554 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAEDPFQLLAVCINLAEALRSSTPENTVS 1375 S++ RVAF+ENHLED+FDSA++PLEG+RWWLGAEDPFQ LA CIN+AEALRS +PE +S Sbjct: 350 SYEGRVAFSENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAIS 409 Query: 1374 HIPVHQDGSCNGLQHYAALGKDKLGAISVNLVAGDEPADVYSSIATRVLNIMCRDAEKGP 1195 ++P+HQDGSCNGLQHYAALG+DKLGA +VNLVAGD+PADVYS IA RVL+IM RDA K P Sbjct: 410 YMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDP 469 Query: 1194 SINPNALHAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDMMADDTELFRA 1015 + +PN + A+LLI+QVDRKLVKQTVMTSVYGVTYIGAR+QIK+RLKER ++ DD ELF A Sbjct: 470 ANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAA 529 Query: 1014 SCYAAKTTLTALGEMFQAARDIMTWLGDCAKVIASENHPVRWTTPLGLPVVQPYQKLGSH 835 +CYAAKTTLTALGEMF+AAR IM+WLGDCAK+IA ENHPVRWTTPLGLPVVQPY+KLG H Sbjct: 530 ACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRH 589 Query: 834 MVKTSLQVLTLRRETDKVMVRRQRTAFPPNFVHSLDGSHMMMTAVACQRAGLNFAGVHDS 655 ++KTSLQ+LTL+RETDKVMV+RQRTAFPPNFVHSLDGSHMMMTA+AC+ +GL+FAGVHDS Sbjct: 590 LIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDS 649 Query: 654 YWTHACDVDQMNRILREKFVELYEKPILENLLESFQQSFPTLSFPPLPERGDFNLNDVLE 475 YWTHACDVDQMN+ILREKFVELY+ PILENLLESFQQSFP L FPPLPERGDF+L +VLE Sbjct: 650 YWTHACDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLE 709 Query: 474 SPYFFN 457 SPYFFN Sbjct: 710 SPYFFN 715 >ref|XP_003577161.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like [Brachypodium distachyon] Length = 992 Score = 748 bits (1932), Expect = 0.0 Identities = 353/426 (82%), Positives = 395/426 (92%) Frame = -3 Query: 1734 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 1555 PHNLDFRGRAYPMHPYLNHLGSD+CRGVLEF+EGRPLG SGL WLKIHLANLYA GVDKL Sbjct: 567 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFSEGRPLGDSGLCWLKIHLANLYAGGVDKL 626 Query: 1554 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAEDPFQLLAVCINLAEALRSSTPENTVS 1375 S+D R+AFTENHLED+FDSA++PLEG+RWWLGAEDPFQ LAVC++L EALRSS+PE +S Sbjct: 627 SYDGRIAFTENHLEDIFDSANRPLEGKRWWLGAEDPFQCLAVCMDLTEALRSSSPEAMIS 686 Query: 1374 HIPVHQDGSCNGLQHYAALGKDKLGAISVNLVAGDEPADVYSSIATRVLNIMCRDAEKGP 1195 HIPVHQDGSCNGLQHYAALG+DKLGAI+VNLV+G++PADVYS IATRV+ IM RDA+K P Sbjct: 687 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGEKPADVYSGIATRVVEIMRRDAQKDP 746 Query: 1194 SINPNALHAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDMMADDTELFRA 1015 +++P+A A+LL+DQVDRKLVKQTVMTSVYGVTY+GAREQIKRRLKER ++ DD+ELF A Sbjct: 747 ALDPDAARARLLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGVIGDDSELFAA 806 Query: 1014 SCYAAKTTLTALGEMFQAARDIMTWLGDCAKVIASENHPVRWTTPLGLPVVQPYQKLGSH 835 SCYAAK TLTALGEMF+AAR IM WLGDCAKVIA EN PVRW TPLGLPVVQPY+KLG H Sbjct: 807 SCYAAKVTLTALGEMFEAARSIMNWLGDCAKVIACENEPVRWMTPLGLPVVQPYRKLGRH 866 Query: 834 MVKTSLQVLTLRRETDKVMVRRQRTAFPPNFVHSLDGSHMMMTAVACQRAGLNFAGVHDS 655 ++KTSLQVLTL+RETDKVMV+RQRTAFPPNFVHSLDGSHMMMTAVAC + GL FAGVHDS Sbjct: 867 LIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACNKQGLYFAGVHDS 926 Query: 654 YWTHACDVDQMNRILREKFVELYEKPILENLLESFQQSFPTLSFPPLPERGDFNLNDVLE 475 YWTHACDVD MN+ILREKFVELY+ PILENLL+SF+ SFPTL FPPLPERGDF+LNDVL+ Sbjct: 927 YWTHACDVDTMNKILREKFVELYDAPILENLLDSFETSFPTLRFPPLPERGDFDLNDVLQ 986 Query: 474 SPYFFN 457 SPYFFN Sbjct: 987 SPYFFN 992 >ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum tuberosum] Length = 993 Score = 746 bits (1927), Expect = 0.0 Identities = 348/426 (81%), Positives = 394/426 (92%) Frame = -3 Query: 1734 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 1555 PHNLDFRGRAYPMHPYLNHLGSD+CRG+LEF+EGRPLGKSGLRWLKIHLAN+Y GVDKL Sbjct: 568 PHNLDFRGRAYPMHPYLNHLGSDLCRGILEFSEGRPLGKSGLRWLKIHLANVYGGGVDKL 627 Query: 1554 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAEDPFQLLAVCINLAEALRSSTPENTVS 1375 S++ R AF+ENH+ED+FDSAD+PLEGRRWWLGAEDPFQ LA CIN++EALRS +PE ++S Sbjct: 628 SYEGRAAFSENHVEDIFDSADRPLEGRRWWLGAEDPFQCLATCINISEALRSPSPETSIS 687 Query: 1374 HIPVHQDGSCNGLQHYAALGKDKLGAISVNLVAGDEPADVYSSIATRVLNIMCRDAEKGP 1195 H+P+HQDGSCNGLQHYAALG+DKLGA +VNLVAGD+PADVYS IA RVL+IM RDA+K P Sbjct: 688 HMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDADKDP 747 Query: 1194 SINPNALHAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDMMADDTELFRA 1015 + +PN + A+LLI+QVDRKLVKQTVMTSVYGVTYIGAR+QIKRRLKER + DD ELF A Sbjct: 748 ATDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDDNELFSA 807 Query: 1014 SCYAAKTTLTALGEMFQAARDIMTWLGDCAKVIASENHPVRWTTPLGLPVVQPYQKLGSH 835 +CYAAKTTLTALGEMF+AAR IM+WLGDCAK+IA EN PVRWTTPLGLPVVQPY+KLG H Sbjct: 808 ACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGRH 867 Query: 834 MVKTSLQVLTLRRETDKVMVRRQRTAFPPNFVHSLDGSHMMMTAVACQRAGLNFAGVHDS 655 ++KTSLQ+LTL+RETDKVMV+RQRTAFPPNFVHSLDGSHMMMTA+ C+ AGL+FAGVHDS Sbjct: 868 LIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAITCKEAGLSFAGVHDS 927 Query: 654 YWTHACDVDQMNRILREKFVELYEKPILENLLESFQQSFPTLSFPPLPERGDFNLNDVLE 475 YWTHA DVDQMN+ILREKFVELY+ PILENLLESFQQSFP L FPPLPERGDF+L +VLE Sbjct: 928 YWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLE 987 Query: 474 SPYFFN 457 SPYFFN Sbjct: 988 SPYFFN 993 >ref|XP_002315996.2| DNA-directed RNA polymerase family protein [Populus trichocarpa] gi|550329816|gb|EEF02167.2| DNA-directed RNA polymerase family protein [Populus trichocarpa] Length = 862 Score = 746 bits (1927), Expect = 0.0 Identities = 353/426 (82%), Positives = 392/426 (92%) Frame = -3 Query: 1734 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 1555 PHN+DFRGRAYPMHPYLNHLGSD+CRG+LEFAEGRPLGKSGLRWLKIHLANLYA GVDKL Sbjct: 437 PHNVDFRGRAYPMHPYLNHLGSDVCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 496 Query: 1554 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAEDPFQLLAVCINLAEALRSSTPENTVS 1375 S+D R++FTENHL+D+FDSAD+PLEG+RWWLGAEDPFQ LAVCINL+EALRS +PE +S Sbjct: 497 SYDGRISFTENHLDDIFDSADRPLEGQRWWLGAEDPFQCLAVCINLSEALRSPSPETAIS 556 Query: 1374 HIPVHQDGSCNGLQHYAALGKDKLGAISVNLVAGDEPADVYSSIATRVLNIMCRDAEKGP 1195 H PVHQDGSCNGLQHYAALG+DKLGA +VNLV G +PADVYS IA RVL+IM RDAE P Sbjct: 557 HTPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGGKPADVYSGIAARVLDIMRRDAENDP 616 Query: 1194 SINPNALHAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDMMADDTELFRA 1015 +INPN++HAKLLI+QVDRKLVKQTVMTSVYGVTYIGAR+QIKRRLKER +ADD +L+ A Sbjct: 617 AINPNSVHAKLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCNIADDPQLYSA 676 Query: 1014 SCYAAKTTLTALGEMFQAARDIMTWLGDCAKVIASENHPVRWTTPLGLPVVQPYQKLGSH 835 +CYAAKTTLTAL EMF+ AR IM WLG+CAKVIASEN PV+WTTP GLPVVQPY++LG Sbjct: 677 ACYAAKTTLTALEEMFEGARGIMAWLGECAKVIASENQPVQWTTPFGLPVVQPYRQLGRQ 736 Query: 834 MVKTSLQVLTLRRETDKVMVRRQRTAFPPNFVHSLDGSHMMMTAVACQRAGLNFAGVHDS 655 ++KTSLQVLTL+RETDKVMV+RQRTAFPPNFVHSLDGSHMMMTAVAC+ AGLNFAGVHDS Sbjct: 737 LIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKEAGLNFAGVHDS 796 Query: 654 YWTHACDVDQMNRILREKFVELYEKPILENLLESFQQSFPTLSFPPLPERGDFNLNDVLE 475 YWTHACDVD+MNRILREKFVELYE PILENLLESFQ SFP L FPPLPERGDF+L DVL+ Sbjct: 797 YWTHACDVDEMNRILREKFVELYETPILENLLESFQSSFPNLKFPPLPERGDFDLRDVLQ 856 Query: 474 SPYFFN 457 S YFFN Sbjct: 857 STYFFN 862