BLASTX nr result
ID: Zingiber23_contig00021288
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00021288
(252 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ11588.1| hypothetical protein PRUPE_ppa000972mg [Prunus pe... 65 9e-09
ref|XP_004983056.1| PREDICTED: E3 ubiquitin-protein ligase RBBP6... 64 3e-08
tpg|DAA49895.1| TPA: hypothetical protein ZEAMMB73_472579 [Zea m... 64 3e-08
ref|XP_002467201.1| hypothetical protein SORBIDRAFT_01g021330 [S... 63 4e-08
gb|EXC02116.1| E3 ubiquitin-protein ligase RBBP6 [Morus notabilis] 62 8e-08
gb|EMT12234.1| Retinoblastoma-binding protein 6 [Aegilops tauschii] 61 1e-07
ref|XP_006662372.1| PREDICTED: E3 ubiquitin-protein ligase RBBP6... 60 2e-07
ref|XP_004983055.1| PREDICTED: E3 ubiquitin-protein ligase RBBP6... 60 3e-07
gb|EOY24290.1| DWNN domain isoform 3 [Theobroma cacao] 60 3e-07
gb|EOY24289.1| DWNN domain isoform 2 [Theobroma cacao] 60 3e-07
gb|EOY24288.1| DWNN domain isoform 1 [Theobroma cacao] 60 3e-07
dbj|BAK02808.1| predicted protein [Hordeum vulgare subsp. vulgare] 60 3e-07
ref|XP_002304286.2| hypothetical protein POPTR_0003s07640g [Popu... 60 4e-07
gb|ABB47659.1| transposon protein, putative, CACTA, En/Spm sub-c... 60 4e-07
tpg|DAA49894.1| TPA: hypothetical protein ZEAMMB73_472579 [Zea m... 60 4e-07
gb|EEE50995.1| hypothetical protein OsJ_31610 [Oryza sativa Japo... 60 4e-07
gb|EEC67002.1| hypothetical protein OsI_33708 [Oryza sativa Indi... 60 4e-07
gb|EMS48185.1| Protein MPE1 [Triticum urartu] 59 7e-07
ref|XP_003572814.1| PREDICTED: uncharacterized protein LOC100823... 59 7e-07
ref|XP_004299417.1| PREDICTED: uncharacterized protein LOC101297... 57 3e-06
>gb|EMJ11588.1| hypothetical protein PRUPE_ppa000972mg [Prunus persica]
Length = 944
Score = 65.1 bits (157), Expect = 9e-09
Identities = 38/87 (43%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Frame = -3
Query: 250 ASVVRDIVQEKQIAGEQGXXXXXXKPGIPITAADMQ---CQDFGTGNFGMSLAASGYNPY 80
A +V + VQ++ +GE G K +P A DMQ QD N+ M + YNPY
Sbjct: 463 APLVEEEVQQRLASGEAGKKRKKKKVRMP--ANDMQWRTSQDLAADNYMMPMGPGAYNPY 520
Query: 79 WAGGMP-LGVDPSYMAPYGGPMPFMGY 2
W G P +G++ YMAPYGGPMP+MGY
Sbjct: 521 WNGMQPGMGME-GYMAPYGGPMPYMGY 546
>ref|XP_004983056.1| PREDICTED: E3 ubiquitin-protein ligase RBBP6-like isoform X2
[Setaria italica]
Length = 900
Score = 63.5 bits (153), Expect = 3e-08
Identities = 41/80 (51%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Frame = -3
Query: 226 QEKQIAGEQGXXXXXXKPGIPITAADM--QCQDFGTGNF-GMSLAASG-YNPYWAGGMPL 59
QEK AGEQ KP P A + QDFG NF GM L +G +NPYW GG+PL
Sbjct: 462 QEKLPAGEQVKKKKKKKPRAPGNADEQWKNFQDFGAENFAGMPLGPTGAFNPYWGGGVPL 521
Query: 58 GVDPSYM-APYGGPMPFMGY 2
+D YM AP+ GPMP+MGY
Sbjct: 522 PMD--YMGAPFPGPMPYMGY 539
>tpg|DAA49895.1| TPA: hypothetical protein ZEAMMB73_472579 [Zea mays]
Length = 810
Score = 63.5 bits (153), Expect = 3e-08
Identities = 42/81 (51%), Positives = 50/81 (61%), Gaps = 6/81 (7%)
Frame = -3
Query: 226 QEKQIAGEQGXXXXXXK-PGIPITAADM--QCQDFGTGNF-GMSLAASG-YNPYWAGGMP 62
QEK AGEQ K P +P A + QDFGT NF GM L +G +NPYW GG+P
Sbjct: 463 QEKFPAGEQAVKKKKKKKPRVPGNAEEQWKNFQDFGTENFSGMPLGPTGAFNPYWGGGVP 522
Query: 61 LGVDPSYM-APYGGPMPFMGY 2
L +D YM AP+ GPMP+MGY
Sbjct: 523 LPMD--YMNAPFPGPMPYMGY 541
>ref|XP_002467201.1| hypothetical protein SORBIDRAFT_01g021330 [Sorghum bicolor]
gi|241921055|gb|EER94199.1| hypothetical protein
SORBIDRAFT_01g021330 [Sorghum bicolor]
Length = 886
Score = 63.2 bits (152), Expect = 4e-08
Identities = 42/81 (51%), Positives = 49/81 (60%), Gaps = 6/81 (7%)
Frame = -3
Query: 226 QEKQIAGEQGXXXXXXK-PGIPITAADM--QCQDFGTGNF-GMSLAASG-YNPYWAGGMP 62
QEK AGEQ K P +P A + QDFG NF GM L +G +NPYW GGMP
Sbjct: 462 QEKFPAGEQAVKKKKKKKPRVPGNAEEQWKNFQDFGAENFPGMPLGPTGAFNPYWGGGMP 521
Query: 61 LGVDPSYM-APYGGPMPFMGY 2
L +D YM AP+ GPMP+MGY
Sbjct: 522 LPMD--YMGAPFPGPMPYMGY 540
>gb|EXC02116.1| E3 ubiquitin-protein ligase RBBP6 [Morus notabilis]
Length = 873
Score = 62.0 bits (149), Expect = 8e-08
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Frame = -3
Query: 250 ASVVRDIVQEKQIAGEQGXXXXXXKPGIPITAADMQC---QDFGTGNFGMSLAASGYNPY 80
A +V + VQ+K +GE G K +P A D+Q QDF N+ M + S YNPY
Sbjct: 461 APLVEEEVQQKLASGELGRKKKKKKIRMP--ANDLQWKAPQDFPVDNYMMPMGPSTYNPY 518
Query: 79 WAGGMPLGVDPSYMAPYGGPMPFMGY 2
W+G P G+D +MAP+ GPMP+MGY
Sbjct: 519 WSGVQP-GMD-GFMAPFPGPMPYMGY 542
>gb|EMT12234.1| Retinoblastoma-binding protein 6 [Aegilops tauschii]
Length = 786
Score = 61.2 bits (147), Expect = 1e-07
Identities = 41/82 (50%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Frame = -3
Query: 226 QEKQIAGEQGXXXXXXK----PGIPITAADMQCQDFGTGNF-GMSLAASG-YNPYWAGGM 65
QEK AGEQ K PG + QDFG NF GM L G +NPYW GGM
Sbjct: 466 QEKLPAGEQAVKKKKKKKVRAPGNAEEQWNNNYQDFGPENFAGMPLGPQGGFNPYWGGGM 525
Query: 64 PLGVDPSYM-APYGGPMPFMGY 2
PL +D YM AP+ GPMP+MGY
Sbjct: 526 PLPID--YMGAPFPGPMPYMGY 545
>ref|XP_006662372.1| PREDICTED: E3 ubiquitin-protein ligase RBBP6-like [Oryza
brachyantha]
Length = 681
Score = 60.5 bits (145), Expect = 2e-07
Identities = 42/88 (47%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Frame = -3
Query: 250 ASVVRDIVQEKQIAGEQGXXXXXXKPGIPITAAD--MQCQDFGTGNF-GMSLA-ASGYNP 83
A +V QEK AGEQ K A+ QDFG NF GM L A G+NP
Sbjct: 459 APIVAKESQEKMPAGEQAVKKKKKKKTRASGNAEDWKPYQDFGAENFAGMPLGPAGGFNP 518
Query: 82 YWAGGMPLGVDPSYM-APYGGPMPFMGY 2
YW GGMPL +D YM P+ GPMP+MGY
Sbjct: 519 YWGGGMPLPMD--YMGTPFPGPMPYMGY 544
>ref|XP_004983055.1| PREDICTED: E3 ubiquitin-protein ligase RBBP6-like isoform X1
[Setaria italica]
Length = 901
Score = 60.1 bits (144), Expect = 3e-07
Identities = 41/81 (50%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Frame = -3
Query: 226 QEKQIAGEQGXXXXXXK-PGIPITAADM--QCQDFGTGNF-GMSLAASG-YNPYWAGGMP 62
QEK AGEQ K P P A + QDFG NF GM L +G +NPYW GG+P
Sbjct: 462 QEKLPAGEQAVKKKKKKKPRAPGNADEQWKNFQDFGAENFAGMPLGPTGAFNPYWGGGVP 521
Query: 61 LGVDPSYM-APYGGPMPFMGY 2
L +D YM AP+ GPMP+MGY
Sbjct: 522 LPMD--YMGAPFPGPMPYMGY 540
>gb|EOY24290.1| DWNN domain isoform 3 [Theobroma cacao]
Length = 608
Score = 60.1 bits (144), Expect = 3e-07
Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Frame = -3
Query: 250 ASVVRDIVQEKQIAGEQGXXXXXXKPGIPITAADMQC---QDFGTGNFGMSLAASGYNPY 80
A + + VQ+K ++GE G K +P A D+Q QD N+ MS+ S YNPY
Sbjct: 212 APLAEEEVQQKVVSGEAGKKKKKKKVRLP--ANDLQWKTPQDLAAENYMMSMGPSAYNPY 269
Query: 79 WAGGMPLGVDPSYMAPYGGPMPFMG 5
WAG P G+D +M PY G MP+MG
Sbjct: 270 WAGMQP-GMD-GFMGPYAGAMPYMG 292
>gb|EOY24289.1| DWNN domain isoform 2 [Theobroma cacao]
Length = 619
Score = 60.1 bits (144), Expect = 3e-07
Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Frame = -3
Query: 250 ASVVRDIVQEKQIAGEQGXXXXXXKPGIPITAADMQC---QDFGTGNFGMSLAASGYNPY 80
A + + VQ+K ++GE G K +P A D+Q QD N+ MS+ S YNPY
Sbjct: 456 APLAEEEVQQKVVSGEAGKKKKKKKVRLP--ANDLQWKTPQDLAAENYMMSMGPSAYNPY 513
Query: 79 WAGGMPLGVDPSYMAPYGGPMPFMG 5
WAG P G+D +M PY G MP+MG
Sbjct: 514 WAGMQP-GMD-GFMGPYAGAMPYMG 536
>gb|EOY24288.1| DWNN domain isoform 1 [Theobroma cacao]
Length = 852
Score = 60.1 bits (144), Expect = 3e-07
Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Frame = -3
Query: 250 ASVVRDIVQEKQIAGEQGXXXXXXKPGIPITAADMQC---QDFGTGNFGMSLAASGYNPY 80
A + + VQ+K ++GE G K +P A D+Q QD N+ MS+ S YNPY
Sbjct: 456 APLAEEEVQQKVVSGEAGKKKKKKKVRLP--ANDLQWKTPQDLAAENYMMSMGPSAYNPY 513
Query: 79 WAGGMPLGVDPSYMAPYGGPMPFMG 5
WAG P G+D +M PY G MP+MG
Sbjct: 514 WAGMQP-GMD-GFMGPYAGAMPYMG 536
>dbj|BAK02808.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 935
Score = 60.1 bits (144), Expect = 3e-07
Identities = 41/82 (50%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Frame = -3
Query: 226 QEKQIAGEQGXXXXXXK----PGIPITAADMQCQDFGTGNF-GMSLAASG-YNPYWAGGM 65
QEK AGEQ K PG + QDFG NF GM L G +NPYW GGM
Sbjct: 497 QEKLPAGEQAIKKKKKKKMRAPGNVEEQWNNNYQDFGPENFAGMPLGPQGGFNPYWGGGM 556
Query: 64 PLGVDPSYM-APYGGPMPFMGY 2
PL +D YM AP+ GPMP+MGY
Sbjct: 557 PLPMD--YMGAPFPGPMPYMGY 576
>ref|XP_002304286.2| hypothetical protein POPTR_0003s07640g [Populus trichocarpa]
gi|550342650|gb|EEE79265.2| hypothetical protein
POPTR_0003s07640g [Populus trichocarpa]
Length = 865
Score = 59.7 bits (143), Expect = 4e-07
Identities = 34/83 (40%), Positives = 44/83 (53%)
Frame = -3
Query: 250 ASVVRDIVQEKQIAGEQGXXXXXXKPGIPITAADMQCQDFGTGNFGMSLAASGYNPYWAG 71
A + + VQ+K GE G K +P QD +F M + S +NPYW+G
Sbjct: 457 APLAEEEVQQKLAPGEAGKKKKKKKVRMPPNDLWKASQDLAAESFMMPMGPSAFNPYWSG 516
Query: 70 GMPLGVDPSYMAPYGGPMPFMGY 2
M G++ YMAPY GPMPFMGY
Sbjct: 517 -MQTGME-GYMAPYPGPMPFMGY 537
>gb|ABB47659.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
Length = 916
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/49 (63%), Positives = 36/49 (73%), Gaps = 3/49 (6%)
Frame = -3
Query: 139 QDFGTGNF-GMSLA-ASGYNPYWAGGMPLGVDPSYM-APYGGPMPFMGY 2
QDFG NF GM + A G+NPYW GGMPL +D YM AP+ GPMP+MGY
Sbjct: 496 QDFGAENFAGMPMGPAGGFNPYWGGGMPLPMD--YMGAPFPGPMPYMGY 542
>tpg|DAA49894.1| TPA: hypothetical protein ZEAMMB73_472579 [Zea mays]
Length = 1019
Score = 59.7 bits (143), Expect = 4e-07
Identities = 34/63 (53%), Positives = 42/63 (66%), Gaps = 5/63 (7%)
Frame = -3
Query: 175 PGIPITAADM--QCQDFGTGNF-GMSLAASG-YNPYWAGGMPLGVDPSYM-APYGGPMPF 11
P +P A + QDFGT NF GM L +G +NPYW GG+PL +D YM AP+ GPMP+
Sbjct: 529 PRVPGNAEEQWKNFQDFGTENFSGMPLGPTGAFNPYWGGGVPLPMD--YMNAPFPGPMPY 586
Query: 10 MGY 2
MGY
Sbjct: 587 MGY 589
>gb|EEE50995.1| hypothetical protein OsJ_31610 [Oryza sativa Japonica Group]
Length = 892
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/49 (63%), Positives = 36/49 (73%), Gaps = 3/49 (6%)
Frame = -3
Query: 139 QDFGTGNF-GMSLA-ASGYNPYWAGGMPLGVDPSYM-APYGGPMPFMGY 2
QDFG NF GM + A G+NPYW GGMPL +D YM AP+ GPMP+MGY
Sbjct: 472 QDFGAENFAGMPMGPAGGFNPYWGGGMPLPMD--YMGAPFPGPMPYMGY 518
>gb|EEC67002.1| hypothetical protein OsI_33708 [Oryza sativa Indica Group]
Length = 894
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/49 (63%), Positives = 36/49 (73%), Gaps = 3/49 (6%)
Frame = -3
Query: 139 QDFGTGNF-GMSLA-ASGYNPYWAGGMPLGVDPSYM-APYGGPMPFMGY 2
QDFG NF GM + A G+NPYW GGMPL +D YM AP+ GPMP+MGY
Sbjct: 474 QDFGAENFAGMPMGPAGGFNPYWGGGMPLPMD--YMGAPFPGPMPYMGY 520
>gb|EMS48185.1| Protein MPE1 [Triticum urartu]
Length = 769
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/49 (63%), Positives = 35/49 (71%), Gaps = 3/49 (6%)
Frame = -3
Query: 139 QDFGTGNF-GMSLAASG-YNPYWAGGMPLGVDPSYM-APYGGPMPFMGY 2
QDFG NF GM L G +NPYW GGMPL +D YM AP+ GPMP+MGY
Sbjct: 519 QDFGPENFAGMPLGPQGGFNPYWGGGMPLPID--YMGAPFPGPMPYMGY 565
>ref|XP_003572814.1| PREDICTED: uncharacterized protein LOC100823388 [Brachypodium
distachyon]
Length = 948
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/49 (63%), Positives = 36/49 (73%), Gaps = 3/49 (6%)
Frame = -3
Query: 139 QDFGTGNFG-MSLAASG-YNPYWAGGMPLGVDPSYM-APYGGPMPFMGY 2
QDFG NFG M L +G +NPYW GGMPL +D YM AP+ GPMP+MGY
Sbjct: 561 QDFGAENFGGMPLGPTGVFNPYWGGGMPLPMD--YMGAPFPGPMPYMGY 607
>ref|XP_004299417.1| PREDICTED: uncharacterized protein LOC101297148 [Fragaria vesca
subsp. vesca]
Length = 894
Score = 56.6 bits (135), Expect = 3e-06
Identities = 36/87 (41%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Frame = -3
Query: 250 ASVVRDIVQEKQIAGEQGXXXXXXKPGIPITAADMQC---QDFGTGNFGMSLAASGYNPY 80
A +V + VQ++ + E G K +P A +MQ QD N+ M + S YNPY
Sbjct: 456 APLVDEEVQQRLASVEAGKKRKKKKVRMP--ANEMQWKTPQDLAAENYMMHMGPSTYNPY 513
Query: 79 WAGGMP-LGVDPSYMAPYGGPMPFMGY 2
W G P +G+D YM PYG PMP+MGY
Sbjct: 514 WNGMQPGMGMD-GYMPPYGAPMPYMGY 539