BLASTX nr result

ID: Zingiber23_contig00021039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00021039
         (623 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD97872.1| ELF3 homologue [Lemna gibba]                          104   2e-20
dbj|BAD97868.1| ELF3 homologue [Lemna paucicostata]                   102   9e-20
gb|EOY27007.1| Hydroxyproline-rich glycoprotein family protein, ...    97   5e-18
gb|AAQ73529.1| early flowering 3 [Mesembryanthemum crystallinum]       96   8e-18
emb|CBI20609.3| unnamed protein product [Vitis vinifera]               94   2e-17
ref|XP_002278577.1| PREDICTED: protein EARLY FLOWERING 3-like [V...    94   2e-17
ref|XP_002515898.1| hypothetical protein RCOM_1486170 [Ricinus c...    94   4e-17
gb|EXB66902.1| hypothetical protein L484_019540 [Morus notabilis]      93   7e-17
ref|XP_006355312.1| PREDICTED: protein EARLY FLOWERING 3-like [S...    92   9e-17
ref|XP_004245125.1| PREDICTED: protein EARLY FLOWERING 3-like [S...    92   9e-17
gb|EXB66904.1| hypothetical protein L484_019542 [Morus notabilis]      92   1e-16
ref|XP_004141800.1| PREDICTED: uncharacterized protein LOC101208...    92   1e-16
ref|XP_004291013.1| PREDICTED: protein EARLY FLOWERING 3-like [F...    92   2e-16
ref|XP_002516480.1| conserved hypothetical protein [Ricinus comm...    91   2e-16
emb|CAN65004.1| hypothetical protein VITISV_023490 [Vitis vinifera]    91   2e-16
ref|XP_002309522.1| EARLY FLOWERING 3 family protein [Populus tr...    91   3e-16
ref|XP_002303218.2| hypothetical protein POPTR_0003s04040g [Popu...    91   3e-16
ref|XP_003523640.1| PREDICTED: protein EARLY FLOWERING 3-like is...    90   6e-16
gb|EXC07678.1| hypothetical protein L484_003122 [Morus notabilis]      88   2e-15
ref|XP_006340248.1| PREDICTED: protein EARLY FLOWERING 3-like [S...    87   3e-15

>dbj|BAD97872.1| ELF3 homologue [Lemna gibba]
          Length = 470

 Score =  104 bits (260), Expect = 2e-20
 Identities = 53/93 (56%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
 Frame = +3

Query: 348 MKGAREEDKVMGPLFPRLHVKDTDKGGPRAPPRNKMALYEQLTIPSQRINSTSSA-MPFP 524
           MK  R+EDKV GPLFPRLHV D D+GGPRAPPRNKMALYEQ +IPSQR +S+SS+ + F 
Sbjct: 1   MKRGRDEDKVFGPLFPRLHVNDADQGGPRAPPRNKMALYEQFSIPSQRFSSSSSSTLTFS 60

Query: 525 XXXXXXXXXXXXXXQGCGQLRKIISPFCMTPQV 623
                         QGCGQ R   + F M PQ+
Sbjct: 61  SRRGSSSAPSISSHQGCGQERSSSTSFYMRPQI 93


>dbj|BAD97868.1| ELF3 homologue [Lemna paucicostata]
          Length = 492

 Score =  102 bits (254), Expect = 9e-20
 Identities = 53/93 (56%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
 Frame = +3

Query: 348 MKGAREEDKVMGPLFPRLHVKDTDKGGPRAPPRNKMALYEQLTIPSQRINSTSS-AMPFP 524
           MK  REE+K+  PLFPRLHV D DKGGPRAPPRNKMALYEQ +IPSQR  S+SS +MPFP
Sbjct: 1   MKRGREEEKISSPLFPRLHVNDADKGGPRAPPRNKMALYEQFSIPSQRFTSSSSPSMPFP 60

Query: 525 XXXXXXXXXXXXXXQGCGQLRKIISPFCMTPQV 623
                         QGC Q R   S   M  Q+
Sbjct: 61  SHRGSNSVPSISSSQGCVQERSASSSLYMRSQI 93


>gb|EOY27007.1| Hydroxyproline-rich glycoprotein family protein, putative
           [Theobroma cacao]
          Length = 774

 Score = 96.7 bits (239), Expect = 5e-18
 Identities = 48/92 (52%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
 Frame = +3

Query: 348 MKGAREEDKVMGPLFPRLHVKDTDKGGPRAPPRNKMALYEQLTIPSQRINSTS-SAMPFP 524
           M+G ++E KVM P+FPRLHV DT++GGPRAPPRNKMALYEQL+IPSQR NS S   +P P
Sbjct: 2   MRGGKDEAKVMSPMFPRLHVNDTERGGPRAPPRNKMALYEQLSIPSQRFNSGSLPVLPLP 61

Query: 525 XXXXXXXXXXXXXXQGCGQLRKIISPFCMTPQ 620
                          G G  R +  PF  +P+
Sbjct: 62  PNSNSSLVPSISSSHGGGNGRSMFMPFGNSPE 93


>gb|AAQ73529.1| early flowering 3 [Mesembryanthemum crystallinum]
          Length = 705

 Score = 95.9 bits (237), Expect = 8e-18
 Identities = 47/90 (52%), Positives = 58/90 (64%)
 Frame = +3

Query: 348 MKGAREEDKVMGPLFPRLHVKDTDKGGPRAPPRNKMALYEQLTIPSQRINSTSSAMPFPX 527
           MK  +++DK+MGP+FPRLHV DT++GGPRAPPRNKMALYEQLT+PSQR N  + A+P   
Sbjct: 1   MKRGKDDDKIMGPMFPRLHVNDTERGGPRAPPRNKMALYEQLTVPSQRYN--TGAVPHHP 58

Query: 528 XXXXXXXXXXXXXQGCGQLRKIISPFCMTP 617
                        QG G  R +  P   TP
Sbjct: 59  SKNSSLNSSTSTNQGTGHERDMYIPLYRTP 88


>emb|CBI20609.3| unnamed protein product [Vitis vinifera]
          Length = 671

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 46/90 (51%), Positives = 57/90 (63%)
 Frame = +3

Query: 348 MKGAREEDKVMGPLFPRLHVKDTDKGGPRAPPRNKMALYEQLTIPSQRINSTSSAMPFPX 527
           MK  ++E+K+MGP+FPRLHV DT+KGGPRAPPRNKMALYEQL++PSQR N     MP   
Sbjct: 1   MKRGKDEEKIMGPMFPRLHVNDTEKGGPRAPPRNKMALYEQLSVPSQRCN--PGVMPLKS 58

Query: 528 XXXXXXXXXXXXXQGCGQLRKIISPFCMTP 617
                        QG G  R +  P  ++P
Sbjct: 59  NNASNLVPPASSSQGSGHERGVFFPHHISP 88


>ref|XP_002278577.1| PREDICTED: protein EARLY FLOWERING 3-like [Vitis vinifera]
          Length = 725

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 46/90 (51%), Positives = 57/90 (63%)
 Frame = +3

Query: 348 MKGAREEDKVMGPLFPRLHVKDTDKGGPRAPPRNKMALYEQLTIPSQRINSTSSAMPFPX 527
           MK  ++E+K+MGP+FPRLHV DT+KGGPRAPPRNKMALYEQL++PSQR N     MP   
Sbjct: 1   MKRGKDEEKIMGPMFPRLHVNDTEKGGPRAPPRNKMALYEQLSVPSQRCN--PGVMPLKS 58

Query: 528 XXXXXXXXXXXXXQGCGQLRKIISPFCMTP 617
                        QG G  R +  P  ++P
Sbjct: 59  NNASNLVPPASSSQGSGHERGVFFPHHISP 88


>ref|XP_002515898.1| hypothetical protein RCOM_1486170 [Ricinus communis]
           gi|223544803|gb|EEF46318.1| hypothetical protein
           RCOM_1486170 [Ricinus communis]
          Length = 783

 Score = 93.6 bits (231), Expect = 4e-17
 Identities = 46/99 (46%), Positives = 62/99 (62%), Gaps = 9/99 (9%)
 Frame = +3

Query: 348 MKGAREEDKVMGPLFPRLHVKDTDKGGPRAPPRNKMALYEQLTIPSQRINSTSSAM---- 515
           M+G ++EDK++ P+FPRLHV DT+KGGPRAPPRNKMALYEQL IPS++++S S++M    
Sbjct: 2   MRGTKDEDKMISPMFPRLHVNDTEKGGPRAPPRNKMALYEQLGIPSRKVSSGSASMLPLP 61

Query: 516 -----PFPXXXXXXXXXXXXXXQGCGQLRKIISPFCMTP 617
                 F               Q  G  R + +PFC +P
Sbjct: 62  PNNGSTFVPKMLPSHVTSDSCSQVSGNERSVFTPFCNSP 100


>gb|EXB66902.1| hypothetical protein L484_019540 [Morus notabilis]
          Length = 727

 Score = 92.8 bits (229), Expect = 7e-17
 Identities = 45/90 (50%), Positives = 56/90 (62%)
 Frame = +3

Query: 348 MKGAREEDKVMGPLFPRLHVKDTDKGGPRAPPRNKMALYEQLTIPSQRINSTSSAMPFPX 527
           M   ++E+K++GP+FPRLHV D DKGGPRAPPRNKMALYEQL+IPSQR NS S  +P   
Sbjct: 1   MSRGKDEEKIVGPMFPRLHVNDADKGGPRAPPRNKMALYEQLSIPSQRGNSASGVVPLNP 60

Query: 528 XXXXXXXXXXXXXQGCGQLRKIISPFCMTP 617
                        Q  G  R ++ P  + P
Sbjct: 61  NFSANMVPSATSSQASGVERYLVYPRHLPP 90


>ref|XP_006355312.1| PREDICTED: protein EARLY FLOWERING 3-like [Solanum tuberosum]
          Length = 656

 Score = 92.4 bits (228), Expect = 9e-17
 Identities = 42/51 (82%), Positives = 46/51 (90%)
 Frame = +3

Query: 348 MKGAREEDKVMGPLFPRLHVKDTDKGGPRAPPRNKMALYEQLTIPSQRINS 500
           MK  + E+KVMGP+FPRLHV DTDKGGPRAPPRNKMALYEQL+IPSQR NS
Sbjct: 1   MKRGKVEEKVMGPMFPRLHVNDTDKGGPRAPPRNKMALYEQLSIPSQRFNS 51


>ref|XP_004245125.1| PREDICTED: protein EARLY FLOWERING 3-like [Solanum lycopersicum]
          Length = 644

 Score = 92.4 bits (228), Expect = 9e-17
 Identities = 42/51 (82%), Positives = 46/51 (90%)
 Frame = +3

Query: 348 MKGAREEDKVMGPLFPRLHVKDTDKGGPRAPPRNKMALYEQLTIPSQRINS 500
           MK  + E+KVMGP+FPRLHV DTDKGGPRAPPRNKMALYEQL+IPSQR NS
Sbjct: 1   MKRGKGEEKVMGPMFPRLHVNDTDKGGPRAPPRNKMALYEQLSIPSQRFNS 51


>gb|EXB66904.1| hypothetical protein L484_019542 [Morus notabilis]
          Length = 464

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 46/90 (51%), Positives = 55/90 (61%)
 Frame = +3

Query: 348 MKGAREEDKVMGPLFPRLHVKDTDKGGPRAPPRNKMALYEQLTIPSQRINSTSSAMPFPX 527
           MK  ++E+K+ GP+FPRLHV   DKGGPRAPPRNKMALYEQL+IPSQR NS S  +P   
Sbjct: 1   MKRGKDEEKIAGPMFPRLHVNYADKGGPRAPPRNKMALYEQLSIPSQRGNSASGVVPLNP 60

Query: 528 XXXXXXXXXXXXXQGCGQLRKIISPFCMTP 617
                        QG G  R +  P  + P
Sbjct: 61  KFSANSVPSSSPSQGSGFERNLFFPRHLPP 90


>ref|XP_004141800.1| PREDICTED: uncharacterized protein LOC101208149 [Cucumis sativus]
           gi|449480722|ref|XP_004155977.1| PREDICTED:
           uncharacterized LOC101208149 [Cucumis sativus]
          Length = 694

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 41/60 (68%), Positives = 52/60 (86%), Gaps = 1/60 (1%)
 Frame = +3

Query: 348 MKGAREEDKVMGPLFPRLHVKDTDKGGPRAPPRNKMALYEQLTIPSQRINS-TSSAMPFP 524
           M+G ++E+K++ P+FPRLHV DT+KGGPRAPPRNKMALYEQLTIP+QR  S ++SA P P
Sbjct: 1   MRGGKDEEKLLSPMFPRLHVNDTEKGGPRAPPRNKMALYEQLTIPTQRFTSGSASATPLP 60


>ref|XP_004291013.1| PREDICTED: protein EARLY FLOWERING 3-like [Fragaria vesca subsp.
           vesca]
          Length = 704

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 48/89 (53%), Positives = 55/89 (61%)
 Frame = +3

Query: 351 KGAREEDKVMGPLFPRLHVKDTDKGGPRAPPRNKMALYEQLTIPSQRINSTSSAMPFPXX 530
           +G R+++KVMGP+FPRLHV D DKGGPRAPPRNKMALYEQL+IPSQR  S   AMP    
Sbjct: 3   RGGRDDEKVMGPMFPRLHVNDPDKGGPRAPPRNKMALYEQLSIPSQR--SNHGAMPLHQN 60

Query: 531 XXXXXXXXXXXXQGCGQLRKIISPFCMTP 617
                       QG G  R +  P    P
Sbjct: 61  SNSSMGSPALSNQGNGPERNLPFPVHARP 89


>ref|XP_002516480.1| conserved hypothetical protein [Ricinus communis]
           gi|223544300|gb|EEF45821.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 720

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 40/59 (67%), Positives = 50/59 (84%)
 Frame = +3

Query: 348 MKGAREEDKVMGPLFPRLHVKDTDKGGPRAPPRNKMALYEQLTIPSQRINSTSSAMPFP 524
           MK  ++++K+MGP+FPRLHV DTDKGGPRAPPRNKMALYEQL+IPSQR N+  + +  P
Sbjct: 5   MKRGKDDEKMMGPMFPRLHVNDTDKGGPRAPPRNKMALYEQLSIPSQRFNNHGALLHNP 63


>emb|CAN65004.1| hypothetical protein VITISV_023490 [Vitis vinifera]
          Length = 1255

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 45/90 (50%), Positives = 54/90 (60%)
 Frame = +3

Query: 348 MKGAREEDKVMGPLFPRLHVKDTDKGGPRAPPRNKMALYEQLTIPSQRINSTSSAMPFPX 527
           MK  ++E KVM PLFPRLHV D +KGGPRAPPRNKMALYEQ ++P     ST   +P   
Sbjct: 522 MKKGKDEGKVMSPLFPRLHVNDAEKGGPRAPPRNKMALYEQFSVPKVPSRST-VILPLLP 580

Query: 528 XXXXXXXXXXXXXQGCGQLRKIISPFCMTP 617
                        QG G  R +++PFC TP
Sbjct: 581 NNSGSLVPSAPSTQGSGHERNVVTPFCYTP 610


>ref|XP_002309522.1| EARLY FLOWERING 3 family protein [Populus trichocarpa]
           gi|222855498|gb|EEE93045.1| EARLY FLOWERING 3 family
           protein [Populus trichocarpa]
          Length = 663

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 40/50 (80%), Positives = 45/50 (90%)
 Frame = +3

Query: 348 MKGAREEDKVMGPLFPRLHVKDTDKGGPRAPPRNKMALYEQLTIPSQRIN 497
           MK  ++ DK+MGP+FPRLHV DTDKGGPRAPPRNKMALYEQL+IPSQR N
Sbjct: 1   MKRGKDYDKIMGPMFPRLHVNDTDKGGPRAPPRNKMALYEQLSIPSQRFN 50


>ref|XP_002303218.2| hypothetical protein POPTR_0003s04040g [Populus trichocarpa]
           gi|550342358|gb|EEE78197.2| hypothetical protein
           POPTR_0003s04040g [Populus trichocarpa]
          Length = 417

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 45/91 (49%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
 Frame = +3

Query: 348 MKGAREEDKVMGPLFPRLHVKDTDKGGPRAPPRNKMALYEQLTIPSQRINSTSSAM-PFP 524
           M+GA++E+K+  P+FPRLHV D +KGGPRAPPRNKMALYEQL IPSQR +S S +M P  
Sbjct: 1   MRGAKDEEKMTSPMFPRLHVNDAEKGGPRAPPRNKMALYEQLCIPSQRFSSGSGSMLPVL 60

Query: 525 XXXXXXXXXXXXXXQGCGQLRKIISPFCMTP 617
                          G G  R + +P   +P
Sbjct: 61  PNNGSSLAPSISSSHGTGHERSVFTPVSNSP 91


>ref|XP_003523640.1| PREDICTED: protein EARLY FLOWERING 3-like isoform X1 [Glycine max]
           gi|571449215|ref|XP_006578075.1| PREDICTED: protein
           EARLY FLOWERING 3-like isoform X2 [Glycine max]
          Length = 714

 Score = 89.7 bits (221), Expect = 6e-16
 Identities = 39/51 (76%), Positives = 46/51 (90%)
 Frame = +3

Query: 348 MKGAREEDKVMGPLFPRLHVKDTDKGGPRAPPRNKMALYEQLTIPSQRINS 500
           MK  ++++KVMGP+FPRLHV DT+KGGPRAPPRNKMALYEQ +IPSQR NS
Sbjct: 1   MKRGKDDEKVMGPMFPRLHVNDTEKGGPRAPPRNKMALYEQFSIPSQRFNS 51


>gb|EXC07678.1| hypothetical protein L484_003122 [Morus notabilis]
          Length = 789

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 45/88 (51%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
 Frame = +3

Query: 348 MKGAREEDKVMGPLFPRLHVKDTDKGGPRAPPRNKMALYEQLTIPSQRINS-TSSAMPFP 524
           M+G ++ +KV  P+FPRLHV DT+KGGPRAPPRNKMALYEQL+IPSQR  S +SS +P  
Sbjct: 68  MRGGKDAEKVTSPMFPRLHVSDTEKGGPRAPPRNKMALYEQLSIPSQRFTSGSSSTLPHA 127

Query: 525 XXXXXXXXXXXXXXQGCGQLRKIISPFC 608
                         Q     R +  PFC
Sbjct: 128 QNSSGDMVSSISSGQ-ASAYRNMFPPFC 154


>ref|XP_006340248.1| PREDICTED: protein EARLY FLOWERING 3-like [Solanum tuberosum]
          Length = 609

 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 44/66 (66%), Positives = 51/66 (77%), Gaps = 7/66 (10%)
 Frame = +3

Query: 348 MKGAREEDKVMGPLFPRLHVKDTDKGGPRAPPRNKMALYEQLTIPSQRI-------NSTS 506
           MK    ++KVMGP+FPRLHV DT+KGGPRAPPRNKMALYEQL+IPSQR        NS++
Sbjct: 1   MKRGIGQEKVMGPMFPRLHVNDTEKGGPRAPPRNKMALYEQLSIPSQRYNPGDLPHNSSN 60

Query: 507 SAMPFP 524
           SA  FP
Sbjct: 61  SANLFP 66


Top