BLASTX nr result

ID: Zingiber23_contig00019936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00019936
         (216 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002436401.1| hypothetical protein SORBIDRAFT_10g001870 [S...    56   4e-06
ref|XP_002511747.1| conserved hypothetical protein [Ricinus comm...    56   6e-06
ref|XP_004964418.1| PREDICTED: coiled-coil domain-containing pro...    55   1e-05

>ref|XP_002436401.1| hypothetical protein SORBIDRAFT_10g001870 [Sorghum bicolor]
           gi|241914624|gb|EER87768.1| hypothetical protein
           SORBIDRAFT_10g001870 [Sorghum bicolor]
          Length = 240

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
 Frame = -3

Query: 214 HGGETRLPPPPSVKELDVIPFKLRKIMEFRNE-NFSAVKQGHAPTSKDSRGQKKRKPVSD 38
           HGG+TRLPPPP  +EL+ IP KLR+++ F+N+ N +A         K   G +K +P ++
Sbjct: 17  HGGDTRLPPPPKHRELEAIPSKLRRLIAFQNKHNANADASSGGAAGKQDGGLRKNRPATE 76

Query: 37  ---CDSENNKKMNK 5
               +   +KK+ K
Sbjct: 77  RTPTEKAKDKKIKK 90


>ref|XP_002511747.1| conserved hypothetical protein [Ricinus communis]
           gi|223548927|gb|EEF50416.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 214

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/63 (41%), Positives = 38/63 (60%)
 Frame = -3

Query: 214 HGGETRLPPPPSVKELDVIPFKLRKIMEFRNENFSAVKQGHAPTSKDSRGQKKRKPVSDC 35
           HGG +RLPPPP   ++D +PFKLRKI+   + N SA         K S+  ++++P SD 
Sbjct: 17  HGGHSRLPPPPDPSQVDALPFKLRKIISITSHNESA---------KPSKSSEEKRPSSDA 67

Query: 34  DSE 26
           D +
Sbjct: 68  DKK 70


>ref|XP_004964418.1| PREDICTED: coiled-coil domain-containing protein 137-like [Setaria
           italica]
          Length = 232

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
 Frame = -3

Query: 214 HGGETRLPPPPSVKELDVIPFKLRKIMEFRN---ENFSAVKQGHAPTSKDSRGQKKRKPV 44
           HGG++RLPPPP  +EL+ IP KLR+++ F+N   +N +A   G     K   G  K +P 
Sbjct: 17  HGGDSRLPPPPKQRELEAIPSKLRRLIAFQNKHDDNANAFSGGARAPGKQDDGLGKNRPA 76

Query: 43  SD 38
            D
Sbjct: 77  KD 78


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