BLASTX nr result
ID: Zingiber23_contig00019912
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00019912
(408 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006848064.1| hypothetical protein AMTR_s00029p00199510 [A... 69 6e-22
ref|XP_006435557.1| hypothetical protein CICLE_v10032838mg [Citr... 67 1e-21
gb|EXB54148.1| Pollen-specific protein SF3 [Morus notabilis] 65 2e-21
ref|XP_002279922.1| PREDICTED: pollen-specific protein SF3 isofo... 67 2e-21
gb|ACX47456.1| LIM1 [Hevea brasiliensis] 66 3e-21
ref|XP_002530411.1| Pollen-specific protein SF3, putative [Ricin... 66 3e-21
ref|NP_001190099.1| actin bundler LIM family protein WLIM2b [Ara... 67 4e-21
ref|NP_191136.1| actin bundler LIM family protein WLIM2b [Arabid... 67 4e-21
ref|XP_004138434.1| PREDICTED: pollen-specific protein SF3-like ... 66 4e-21
emb|CAA62744.1| transcription factor L2 [Arabidopsis thaliana] 67 4e-21
ref|NP_001154680.1| actin bundler LIM family protein WLIM2b [Ara... 67 4e-21
ref|XP_002315180.1| LIM domain-containing family protein [Populu... 65 5e-21
gb|EOY17916.1| GATA type zinc finger transcription factor family... 66 6e-21
dbj|BAH20111.1| AT3G55770 [Arabidopsis thaliana] 67 8e-21
gb|ABK58469.1| LIM domain protein WLIM2a [Populus tremula x Popu... 64 8e-21
ref|XP_004167859.1| PREDICTED: LOW QUALITY PROTEIN: pollen-speci... 65 1e-20
ref|XP_004150238.1| PREDICTED: pollen-specific protein SF3-like ... 65 1e-20
ref|XP_002312139.1| LIM domain-containing family protein [Populu... 65 1e-20
ref|XP_002876333.1| LIM domain-containing protein [Arabidopsis l... 65 1e-20
gb|AAD56951.1|AF184886_1 LIM domain protein WLIM2 [Nicotiana tab... 67 1e-20
>ref|XP_006848064.1| hypothetical protein AMTR_s00029p00199510 [Amborella trichopoda]
gi|548851369|gb|ERN09645.1| hypothetical protein
AMTR_s00029p00199510 [Amborella trichopoda]
Length = 189
Score = 69.3 bits (168), Expect(2) = 6e-22
Identities = 27/35 (77%), Positives = 34/35 (97%)
Frame = +2
Query: 122 TSTQQKCKACDKTVYLMDQLTADGIVFHKSCFKCN 226
+ TQQKCKAC+KTVY+MDQL+ADG+++HKSCFKCN
Sbjct: 4 SGTQQKCKACEKTVYVMDQLSADGVLYHKSCFKCN 38
Score = 60.5 bits (145), Expect(2) = 6e-22
Identities = 27/37 (72%), Positives = 33/37 (89%), Gaps = 1/37 (2%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQSPAKSADK-APELKQA 392
YCKPHFEQLFKE+G+FNK+FQSPAKS +K PEL ++
Sbjct: 57 YCKPHFEQLFKETGSFNKSFQSPAKSVEKLTPELTRS 93
Score = 44.7 bits (104), Expect(2) = 6e-07
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +2
Query: 122 TSTQQKCKACDKTVYLMDQLTADGIVFHKSCFKCN 226
+ TQ KC C KT Y ++++T + +HKSCFKC+
Sbjct: 102 SGTQDKCATCGKTAYPLEKVTVESQSYHKSCFKCS 136
Score = 34.3 bits (77), Expect(2) = 6e-07
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQSPAKSADKAP 377
YCK HF QLFKE G++N + AP
Sbjct: 155 YCKHHFSQLFKEKGSYNHLIKCATMKRQAAP 185
>ref|XP_006435557.1| hypothetical protein CICLE_v10032838mg [Citrus clementina]
gi|567886072|ref|XP_006435558.1| hypothetical protein
CICLE_v10032838mg [Citrus clementina]
gi|568866228|ref|XP_006486459.1| PREDICTED:
pollen-specific protein SF3-like [Citrus sinensis]
gi|557537753|gb|ESR48797.1| hypothetical protein
CICLE_v10032838mg [Citrus clementina]
gi|557537754|gb|ESR48798.1| hypothetical protein
CICLE_v10032838mg [Citrus clementina]
Length = 189
Score = 67.0 bits (162), Expect(2) = 1e-21
Identities = 31/37 (83%), Positives = 34/37 (91%), Gaps = 1/37 (2%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQSPAKSADK-APELKQA 392
YCKPHFEQLFKESGNFNKNFQSPAKSA+K PEL ++
Sbjct: 57 YCKPHFEQLFKESGNFNKNFQSPAKSAEKLTPELTRS 93
Score = 62.0 bits (149), Expect(2) = 1e-21
Identities = 24/33 (72%), Positives = 31/33 (93%)
Frame = +2
Query: 128 TQQKCKACDKTVYLMDQLTADGIVFHKSCFKCN 226
TQQKCK C+KTVY ++QL+ADG+V+HKSCFKC+
Sbjct: 6 TQQKCKVCEKTVYPVEQLSADGVVYHKSCFKCS 38
Score = 45.4 bits (106), Expect(2) = 2e-07
Identities = 15/35 (42%), Positives = 26/35 (74%)
Frame = +2
Query: 122 TSTQQKCKACDKTVYLMDQLTADGIVFHKSCFKCN 226
+ TQ+KC +C KTVY ++++ + +HK+CFKC+
Sbjct: 102 SGTQEKCASCSKTVYPLEKVAVENQAYHKTCFKCS 136
Score = 35.0 bits (79), Expect(2) = 2e-07
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQSPA--KSADKAPE 380
YCK HF QLFKE G++N +S + ++A PE
Sbjct: 155 YCKHHFSQLFKEKGSYNHLIKSASMKRAAASVPE 188
>gb|EXB54148.1| Pollen-specific protein SF3 [Morus notabilis]
Length = 192
Score = 64.7 bits (156), Expect(2) = 2e-21
Identities = 26/35 (74%), Positives = 32/35 (91%)
Frame = +2
Query: 122 TSTQQKCKACDKTVYLMDQLTADGIVFHKSCFKCN 226
T TQQKCKACDKTVY ++QL+ADG+ +HKSCFKC+
Sbjct: 4 TGTQQKCKACDKTVYPVEQLSADGVSYHKSCFKCS 38
Score = 63.5 bits (153), Expect(2) = 2e-21
Identities = 29/37 (78%), Positives = 34/37 (91%), Gaps = 1/37 (2%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQSPAKSADKA-PELKQA 392
YCKPHFEQLFKE+G+FNKNFQSPAKSA+K PEL ++
Sbjct: 57 YCKPHFEQLFKETGSFNKNFQSPAKSAEKLNPELTRS 93
Score = 47.4 bits (111), Expect(2) = 3e-08
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +2
Query: 122 TSTQQKCKACDKTVYLMDQLTADGIVFHKSCFKCN 226
+ TQ KC C KT Y ++++T + + +HKSCFKC+
Sbjct: 102 SGTQDKCATCGKTAYPLEKVTVESLTYHKSCFKCS 136
Score = 36.2 bits (82), Expect(2) = 3e-08
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQSPA--KSADKAPELKQA 392
YCK HF QLFKE GN+N +S + ++A P + +A
Sbjct: 155 YCKHHFAQLFKEKGNYNHVLRSASSKRTAAAPPSVPEA 192
>ref|XP_002279922.1| PREDICTED: pollen-specific protein SF3 isoform 1 [Vitis vinifera]
gi|147859521|emb|CAN81425.1| hypothetical protein
VITISV_014590 [Vitis vinifera]
gi|296086105|emb|CBI31546.3| unnamed protein product
[Vitis vinifera]
Length = 189
Score = 67.0 bits (162), Expect(2) = 2e-21
Identities = 31/37 (83%), Positives = 34/37 (91%), Gaps = 1/37 (2%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQSPAKSADK-APELKQA 392
YCKPHFEQLFKESGNFNKNFQSPAKSA+K PEL ++
Sbjct: 57 YCKPHFEQLFKESGNFNKNFQSPAKSAEKLTPELTRS 93
Score = 61.2 bits (147), Expect(2) = 2e-21
Identities = 25/33 (75%), Positives = 31/33 (93%)
Frame = +2
Query: 128 TQQKCKACDKTVYLMDQLTADGIVFHKSCFKCN 226
TQQKCKAC KTVY ++QL+ADG+V+HKSCFKC+
Sbjct: 6 TQQKCKACLKTVYPVEQLSADGVVYHKSCFKCS 38
Score = 46.2 bits (108), Expect(2) = 2e-07
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +2
Query: 122 TSTQQKCKACDKTVYLMDQLTADGIVFHKSCFKCN 226
+ TQ+KC C KT Y ++++T + +HKSCFKC+
Sbjct: 102 SGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCS 136
Score = 34.7 bits (78), Expect(2) = 2e-07
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQSPA--KSADKAPE 380
YCK HF QLFKE G++N +S + +SA P+
Sbjct: 155 YCKHHFAQLFKEKGSYNHLIKSASMKRSAASVPD 188
>gb|ACX47456.1| LIM1 [Hevea brasiliensis]
Length = 189
Score = 65.9 bits (159), Expect(2) = 3e-21
Identities = 30/37 (81%), Positives = 34/37 (91%), Gaps = 1/37 (2%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQSPAKSADK-APELKQA 392
YCKPHFEQLFKE+GNFNKNFQSPAKSA+K PEL ++
Sbjct: 57 YCKPHFEQLFKETGNFNKNFQSPAKSAEKLTPELTRS 93
Score = 61.6 bits (148), Expect(2) = 3e-21
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = +2
Query: 122 TSTQQKCKACDKTVYLMDQLTADGIVFHKSCFKC 223
T TQQKCKAC+KTVY M+ L+ADG+ +HKSCFKC
Sbjct: 4 TGTQQKCKACEKTVYPMELLSADGVPYHKSCFKC 37
Score = 46.2 bits (108), Expect(2) = 3e-07
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +2
Query: 122 TSTQQKCKACDKTVYLMDQLTADGIVFHKSCFKCN 226
+ TQ+KC C KT Y ++++T + +HKSCFKC+
Sbjct: 102 SGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCS 136
Score = 33.9 bits (76), Expect(2) = 3e-07
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQ--SPAKSADKAPE 380
YCK HF QLFKE G++N + S ++A PE
Sbjct: 155 YCKHHFSQLFKEKGSYNHLIKCASMKRAAASVPE 188
>ref|XP_002530411.1| Pollen-specific protein SF3, putative [Ricinus communis]
gi|223530060|gb|EEF31981.1| Pollen-specific protein SF3,
putative [Ricinus communis]
Length = 189
Score = 65.9 bits (159), Expect(2) = 3e-21
Identities = 30/37 (81%), Positives = 34/37 (91%), Gaps = 1/37 (2%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQSPAKSADK-APELKQA 392
YCKPHFEQLFKE+GNFNKNFQSPAKSA+K PEL ++
Sbjct: 57 YCKPHFEQLFKETGNFNKNFQSPAKSAEKLTPELTRS 93
Score = 61.6 bits (148), Expect(2) = 3e-21
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = +2
Query: 122 TSTQQKCKACDKTVYLMDQLTADGIVFHKSCFKC 223
T TQQKCKAC+KTVY M+ L+ADG+ +HKSCFKC
Sbjct: 4 TGTQQKCKACEKTVYPMELLSADGVPYHKSCFKC 37
Score = 46.2 bits (108), Expect(2) = 1e-07
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +2
Query: 122 TSTQQKCKACDKTVYLMDQLTADGIVFHKSCFKCN 226
+ TQ+KC C KT Y ++++T + +HKSCFKC+
Sbjct: 102 SGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCS 136
Score = 35.0 bits (79), Expect(2) = 1e-07
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQSPA--KSADKAPE 380
YCK HF QLFKE G++N +S + ++A PE
Sbjct: 155 YCKHHFSQLFKEKGSYNHLIKSASMKRAAASVPE 188
>ref|NP_001190099.1| actin bundler LIM family protein WLIM2b [Arabidopsis thaliana]
gi|332645919|gb|AEE79440.1| actin bundler LIM family
protein WLIM2b [Arabidopsis thaliana]
Length = 233
Score = 66.6 bits (161), Expect(2) = 4e-21
Identities = 31/34 (91%), Positives = 33/34 (97%), Gaps = 1/34 (2%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQSPAKSADKA-PEL 383
YCKPHFEQLFKESG+FNKNFQSPAKSADK+ PEL
Sbjct: 57 YCKPHFEQLFKESGSFNKNFQSPAKSADKSTPEL 90
Score = 60.5 bits (145), Expect(2) = 4e-21
Identities = 24/34 (70%), Positives = 30/34 (88%)
Frame = +2
Query: 122 TSTQQKCKACDKTVYLMDQLTADGIVFHKSCFKC 223
T TQQKCKAC+KTVY ++ L+ADG+ +HKSCFKC
Sbjct: 4 TGTQQKCKACEKTVYAVELLSADGVGYHKSCFKC 37
>ref|NP_191136.1| actin bundler LIM family protein WLIM2b [Arabidopsis thaliana]
gi|79315238|ref|NP_001030868.1| actin bundler LIM family
protein WLIM2b [Arabidopsis thaliana]
gi|79315263|ref|NP_001030869.1| actin bundler LIM family
protein WLIM2b [Arabidopsis thaliana]
gi|79315283|ref|NP_001030870.1| actin bundler LIM family
protein WLIM2b [Arabidopsis thaliana]
gi|79586884|ref|NP_680133.2| actin bundler LIM family
protein WLIM2b [Arabidopsis thaliana]
gi|7263565|emb|CAB81602.1| transcription factor L2
[Arabidopsis thaliana] gi|17380936|gb|AAL36280.1|
putative transcription factor L2 [Arabidopsis thaliana]
gi|20258945|gb|AAM14188.1| putative transcription factor
L2 [Arabidopsis thaliana] gi|21536610|gb|AAM60942.1|
transcription factor L2 [Arabidopsis thaliana]
gi|222423699|dbj|BAH19816.1| AT3G55770 [Arabidopsis
thaliana] gi|222424124|dbj|BAH20021.1| AT3G55770
[Arabidopsis thaliana] gi|332645913|gb|AEE79434.1| actin
bundler LIM family protein WLIM2b [Arabidopsis thaliana]
gi|332645914|gb|AEE79435.1| actin bundler LIM family
protein WLIM2b [Arabidopsis thaliana]
gi|332645915|gb|AEE79436.1| actin bundler LIM family
protein WLIM2b [Arabidopsis thaliana]
gi|332645916|gb|AEE79437.1| actin bundler LIM family
protein WLIM2b [Arabidopsis thaliana]
gi|332645917|gb|AEE79438.1| actin bundler LIM family
protein WLIM2b [Arabidopsis thaliana]
Length = 199
Score = 66.6 bits (161), Expect(2) = 4e-21
Identities = 31/34 (91%), Positives = 33/34 (97%), Gaps = 1/34 (2%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQSPAKSADKA-PEL 383
YCKPHFEQLFKESG+FNKNFQSPAKSADK+ PEL
Sbjct: 57 YCKPHFEQLFKESGSFNKNFQSPAKSADKSTPEL 90
Score = 60.5 bits (145), Expect(2) = 4e-21
Identities = 24/34 (70%), Positives = 30/34 (88%)
Frame = +2
Query: 122 TSTQQKCKACDKTVYLMDQLTADGIVFHKSCFKC 223
T TQQKCKAC+KTVY ++ L+ADG+ +HKSCFKC
Sbjct: 4 TGTQQKCKACEKTVYAVELLSADGVGYHKSCFKC 37
Score = 51.6 bits (122), Expect(2) = 1e-08
Identities = 19/40 (47%), Positives = 29/40 (72%)
Frame = +2
Query: 107 VVGKCTSTQQKCKACDKTVYLMDQLTADGIVFHKSCFKCN 226
V G+ + TQ+KC C KTVY ++++T + +HKSCFKC+
Sbjct: 97 VAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCS 136
Score = 33.1 bits (74), Expect(2) = 1e-08
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQS 350
YCK HF QLFKE G++N +S
Sbjct: 155 YCKHHFAQLFKEKGSYNHLIKS 176
>ref|XP_004138434.1| PREDICTED: pollen-specific protein SF3-like [Cucumis sativus]
gi|449516649|ref|XP_004165359.1| PREDICTED:
pollen-specific protein SF3-like [Cucumis sativus]
Length = 189
Score = 65.9 bits (159), Expect(2) = 4e-21
Identities = 30/37 (81%), Positives = 34/37 (91%), Gaps = 1/37 (2%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQSPAKSADK-APELKQA 392
YCKPHFEQLFKE+GNFNKNFQSPAKSA+K PEL ++
Sbjct: 57 YCKPHFEQLFKETGNFNKNFQSPAKSAEKLTPELTRS 93
Score = 61.2 bits (147), Expect(2) = 4e-21
Identities = 24/33 (72%), Positives = 31/33 (93%)
Frame = +2
Query: 128 TQQKCKACDKTVYLMDQLTADGIVFHKSCFKCN 226
TQQKCKAC+KTVY ++QL+ADG+ +HKSCFKC+
Sbjct: 6 TQQKCKACEKTVYPVEQLSADGVSYHKSCFKCS 38
Score = 47.4 bits (111), Expect(2) = 2e-08
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +2
Query: 113 GKCTSTQQKCKACDKTVYLMDQLTADGIVFHKSCFKCN 226
G + TQ KC C KTVY ++++T + +HKSCFKC+
Sbjct: 99 GMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCS 136
Score = 36.6 bits (83), Expect(2) = 2e-08
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQSPAKSADKAP 377
YCK HF QLFKE G++N +S + AP
Sbjct: 155 YCKHHFSQLFKEKGSYNHLIKSASMKRSAAP 185
>emb|CAA62744.1| transcription factor L2 [Arabidopsis thaliana]
Length = 172
Score = 66.6 bits (161), Expect(2) = 4e-21
Identities = 31/34 (91%), Positives = 33/34 (97%), Gaps = 1/34 (2%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQSPAKSADKA-PEL 383
YCKPHFEQLFKESG+FNKNFQSPAKSADK+ PEL
Sbjct: 57 YCKPHFEQLFKESGSFNKNFQSPAKSADKSTPEL 90
Score = 60.5 bits (145), Expect(2) = 4e-21
Identities = 24/34 (70%), Positives = 30/34 (88%)
Frame = +2
Query: 122 TSTQQKCKACDKTVYLMDQLTADGIVFHKSCFKC 223
T TQQKCKAC+KTVY ++ L+ADG+ +HKSCFKC
Sbjct: 4 TGTQQKCKACEKTVYAVELLSADGVGYHKSCFKC 37
>ref|NP_001154680.1| actin bundler LIM family protein WLIM2b [Arabidopsis thaliana]
gi|332645918|gb|AEE79439.1| actin bundler LIM family
protein WLIM2b [Arabidopsis thaliana]
Length = 127
Score = 66.6 bits (161), Expect(2) = 4e-21
Identities = 31/34 (91%), Positives = 33/34 (97%), Gaps = 1/34 (2%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQSPAKSADKA-PEL 383
YCKPHFEQLFKESG+FNKNFQSPAKSADK+ PEL
Sbjct: 57 YCKPHFEQLFKESGSFNKNFQSPAKSADKSTPEL 90
Score = 60.5 bits (145), Expect(2) = 4e-21
Identities = 24/34 (70%), Positives = 30/34 (88%)
Frame = +2
Query: 122 TSTQQKCKACDKTVYLMDQLTADGIVFHKSCFKC 223
T TQQKCKAC+KTVY ++ L+ADG+ +HKSCFKC
Sbjct: 4 TGTQQKCKACEKTVYAVELLSADGVGYHKSCFKC 37
>ref|XP_002315180.1| LIM domain-containing family protein [Populus trichocarpa]
gi|118488763|gb|ABK96192.1| unknown [Populus
trichocarpa] gi|222864220|gb|EEF01351.1| LIM
domain-containing family protein [Populus trichocarpa]
Length = 189
Score = 65.5 bits (158), Expect(2) = 5e-21
Identities = 30/37 (81%), Positives = 34/37 (91%), Gaps = 1/37 (2%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQSPAKSADKA-PELKQA 392
YCKPHFEQLFKE+GNFNKNFQSPAKSA+K PEL ++
Sbjct: 57 YCKPHFEQLFKETGNFNKNFQSPAKSAEKLNPELTRS 93
Score = 61.2 bits (147), Expect(2) = 5e-21
Identities = 24/34 (70%), Positives = 30/34 (88%)
Frame = +2
Query: 122 TSTQQKCKACDKTVYLMDQLTADGIVFHKSCFKC 223
T TQQKCKAC+KTVY M+ L+ADG+ +HK+CFKC
Sbjct: 4 TGTQQKCKACEKTVYPMELLSADGVAYHKTCFKC 37
Score = 46.2 bits (108), Expect(2) = 2e-07
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +2
Query: 122 TSTQQKCKACDKTVYLMDQLTADGIVFHKSCFKCN 226
+ TQ+KC C KT Y ++++T + +HKSCFKC+
Sbjct: 102 SGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCS 136
Score = 34.7 bits (78), Expect(2) = 2e-07
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQSPA--KSADKAPE 380
YCK HF QLFKE G++N +S ++A PE
Sbjct: 155 YCKHHFSQLFKEKGSYNHLIKSATMKRAAASVPE 188
>gb|EOY17916.1| GATA type zinc finger transcription factor family protein isoform 1
[Theobroma cacao] gi|508726022|gb|EOY17919.1| GATA type
zinc finger transcription factor family protein isoform
1 [Theobroma cacao]
Length = 189
Score = 65.9 bits (159), Expect(2) = 6e-21
Identities = 30/37 (81%), Positives = 34/37 (91%), Gaps = 1/37 (2%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQSPAKSADK-APELKQA 392
YCKPHFEQLFKE+GNFNKNFQSPAKSA+K PEL ++
Sbjct: 57 YCKPHFEQLFKETGNFNKNFQSPAKSAEKLTPELTRS 93
Score = 60.5 bits (145), Expect(2) = 6e-21
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2
Query: 122 TSTQQKCKACDKTVYLMDQLTADGIVFHKSCFKCN 226
T TQQKCKAC+KTVY ++ L+ADG+ +HKSCFKC+
Sbjct: 4 TGTQQKCKACEKTVYPVELLSADGVPYHKSCFKCS 38
Score = 47.8 bits (112), Expect(2) = 5e-08
Identities = 17/35 (48%), Positives = 26/35 (74%)
Frame = +2
Query: 122 TSTQQKCKACDKTVYLMDQLTADGIVFHKSCFKCN 226
+ TQ+KC C KT Y ++++T +G +HKSCFKC+
Sbjct: 102 SGTQEKCATCGKTAYPLEKVTVEGQSYHKSCFKCS 136
Score = 35.0 bits (79), Expect(2) = 5e-08
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQSPA--KSADKAPE 380
YCK HF QLFKE G++N +S + ++A PE
Sbjct: 155 YCKHHFSQLFKEKGSYNHLIKSASIKRAAASVPE 188
>dbj|BAH20111.1| AT3G55770 [Arabidopsis thaliana]
Length = 199
Score = 66.6 bits (161), Expect(2) = 8e-21
Identities = 31/34 (91%), Positives = 33/34 (97%), Gaps = 1/34 (2%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQSPAKSADKA-PEL 383
YCKPHFEQLFKESG+FNKNFQSPAKSADK+ PEL
Sbjct: 57 YCKPHFEQLFKESGSFNKNFQSPAKSADKSTPEL 90
Score = 59.3 bits (142), Expect(2) = 8e-21
Identities = 24/34 (70%), Positives = 29/34 (85%)
Frame = +2
Query: 122 TSTQQKCKACDKTVYLMDQLTADGIVFHKSCFKC 223
T TQQKCKAC KTVY ++ L+ADG+ +HKSCFKC
Sbjct: 4 TGTQQKCKACGKTVYAVELLSADGVGYHKSCFKC 37
Score = 51.6 bits (122), Expect(2) = 1e-08
Identities = 19/40 (47%), Positives = 29/40 (72%)
Frame = +2
Query: 107 VVGKCTSTQQKCKACDKTVYLMDQLTADGIVFHKSCFKCN 226
V G+ + TQ+KC C KTVY ++++T + +HKSCFKC+
Sbjct: 97 VAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCS 136
Score = 33.1 bits (74), Expect(2) = 1e-08
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQS 350
YCK HF QLFKE G++N +S
Sbjct: 155 YCKHHFAQLFKEKGSYNHLIKS 176
>gb|ABK58469.1| LIM domain protein WLIM2a [Populus tremula x Populus alba]
Length = 189
Score = 63.5 bits (153), Expect(2) = 8e-21
Identities = 28/37 (75%), Positives = 34/37 (91%), Gaps = 1/37 (2%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQSPAKSADK-APELKQA 392
YCKPHF+QLFKE+GNFNKNFQSPAK+A+K PEL ++
Sbjct: 57 YCKPHFDQLFKETGNFNKNFQSPAKTAEKLTPELTRS 93
Score = 62.4 bits (150), Expect(2) = 8e-21
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = +2
Query: 122 TSTQQKCKACDKTVYLMDQLTADGIVFHKSCFKC 223
T TQQKCKAC+KTVY M+ L+ADG+ +HKSCFKC
Sbjct: 4 TGTQQKCKACEKTVYPMELLSADGVAYHKSCFKC 37
Score = 47.4 bits (111), Expect(2) = 3e-08
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +2
Query: 113 GKCTSTQQKCKACDKTVYLMDQLTADGIVFHKSCFKCN 226
G + TQ+KC C KT Y ++++T + +HKSCFKC+
Sbjct: 99 GMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCS 136
Score = 35.8 bits (81), Expect(2) = 3e-08
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQSPAKSADKAP 377
YCK HF QLFKE G++N +S + AP
Sbjct: 155 YCKHHFSQLFKEKGSYNHLIKSASMKRAAAP 185
>ref|XP_004167859.1| PREDICTED: LOW QUALITY PROTEIN: pollen-specific protein SF3-like
[Cucumis sativus]
Length = 195
Score = 65.5 bits (158), Expect(2) = 1e-20
Identities = 27/33 (81%), Positives = 31/33 (93%)
Frame = +2
Query: 128 TQQKCKACDKTVYLMDQLTADGIVFHKSCFKCN 226
TQQKCKACDKTVY +DQL+ADG+ FHKSCFKC+
Sbjct: 6 TQQKCKACDKTVYPVDQLSADGVSFHKSCFKCS 38
Score = 60.1 bits (144), Expect(2) = 1e-20
Identities = 27/37 (72%), Positives = 33/37 (89%), Gaps = 1/37 (2%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQSPAKSADK-APELKQA 392
YCKPHFEQLFKE+GNF+KNF SPAKS++K PEL ++
Sbjct: 57 YCKPHFEQLFKETGNFSKNFLSPAKSSEKLTPELTRS 93
Score = 46.2 bits (108), Expect(2) = 2e-06
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +2
Query: 122 TSTQQKCKACDKTVYLMDQLTADGIVFHKSCFKCN 226
+ TQ+KC C KT Y ++++T + +HKSCFKC+
Sbjct: 102 SGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCS 136
Score = 31.2 bits (69), Expect(2) = 2e-06
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 288 CKPHFEQLFKESGNFNKNFQSPAKSADKA 374
CK HF QLFKE G++N +S + A
Sbjct: 156 CKHHFSQLFKEKGSYNHLIKSASMKRQAA 184
>ref|XP_004150238.1| PREDICTED: pollen-specific protein SF3-like isoform 1 [Cucumis
sativus] gi|449465045|ref|XP_004150239.1| PREDICTED:
pollen-specific protein SF3-like isoform 2 [Cucumis
sativus]
Length = 195
Score = 65.5 bits (158), Expect(2) = 1e-20
Identities = 27/33 (81%), Positives = 31/33 (93%)
Frame = +2
Query: 128 TQQKCKACDKTVYLMDQLTADGIVFHKSCFKCN 226
TQQKCKACDKTVY +DQL+ADG+ FHKSCFKC+
Sbjct: 6 TQQKCKACDKTVYPVDQLSADGVSFHKSCFKCS 38
Score = 60.1 bits (144), Expect(2) = 1e-20
Identities = 27/37 (72%), Positives = 33/37 (89%), Gaps = 1/37 (2%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQSPAKSADK-APELKQA 392
YCKPHFEQLFKE+GNF+KNF SPAKS++K PEL ++
Sbjct: 57 YCKPHFEQLFKETGNFSKNFLSPAKSSEKPTPELTRS 93
Score = 46.2 bits (108), Expect(2) = 3e-07
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +2
Query: 122 TSTQQKCKACDKTVYLMDQLTADGIVFHKSCFKCN 226
+ TQ+KC C KT Y ++++T + +HKSCFKC+
Sbjct: 102 SGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCS 136
Score = 33.9 bits (76), Expect(2) = 3e-07
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQSPAKSADKA 374
YCK HF QLFKE G++N +S + A
Sbjct: 155 YCKHHFSQLFKEKGSYNHLIKSASMKRQAA 184
>ref|XP_002312139.1| LIM domain-containing family protein [Populus trichocarpa]
gi|118485190|gb|ABK94456.1| unknown [Populus
trichocarpa] gi|222851959|gb|EEE89506.1| LIM
domain-containing family protein [Populus trichocarpa]
Length = 189
Score = 64.7 bits (156), Expect(2) = 1e-20
Identities = 29/37 (78%), Positives = 34/37 (91%), Gaps = 1/37 (2%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQSPAKSADK-APELKQA 392
YCKPHF+QLFKE+GNFNKNFQSPAKSA+K PEL ++
Sbjct: 57 YCKPHFDQLFKETGNFNKNFQSPAKSAEKLTPELTRS 93
Score = 60.8 bits (146), Expect(2) = 1e-20
Identities = 24/34 (70%), Positives = 29/34 (85%)
Frame = +2
Query: 122 TSTQQKCKACDKTVYLMDQLTADGIVFHKSCFKC 223
T TQQKCKAC+KTVY M+ L+ DG+ +HKSCFKC
Sbjct: 4 TGTQQKCKACEKTVYPMELLSTDGVAYHKSCFKC 37
Score = 47.4 bits (111), Expect(2) = 1e-07
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +2
Query: 113 GKCTSTQQKCKACDKTVYLMDQLTADGIVFHKSCFKCN 226
G + TQ+KC C KT Y ++++T + +HKSCFKC+
Sbjct: 99 GMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCS 136
Score = 33.9 bits (76), Expect(2) = 1e-07
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQSPAKSADKAP 377
YCK HF QLFKE G++N + + AP
Sbjct: 155 YCKHHFSQLFKEKGSYNHLIKCASMKRAAAP 185
>ref|XP_002876333.1| LIM domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297322171|gb|EFH52592.1| LIM domain-containing
protein [Arabidopsis lyrata subsp. lyrata]
Length = 199
Score = 64.7 bits (156), Expect(2) = 1e-20
Identities = 30/34 (88%), Positives = 32/34 (94%), Gaps = 1/34 (2%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQSPAKSADKA-PEL 383
YCKPHFEQLFKESG+FNKNFQSPAK ADK+ PEL
Sbjct: 57 YCKPHFEQLFKESGSFNKNFQSPAKPADKSTPEL 90
Score = 60.5 bits (145), Expect(2) = 1e-20
Identities = 24/34 (70%), Positives = 30/34 (88%)
Frame = +2
Query: 122 TSTQQKCKACDKTVYLMDQLTADGIVFHKSCFKC 223
T TQQKCKAC+KTVY ++ L+ADG+ +HKSCFKC
Sbjct: 4 TGTQQKCKACEKTVYAVELLSADGVGYHKSCFKC 37
Score = 49.3 bits (116), Expect(2) = 6e-08
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = +2
Query: 107 VVGKCTSTQQKCKACDKTVYLMDQLTADGIVFHKSCFKCN 226
V + + TQ+KC C KTVY ++++T + +HKSCFKC+
Sbjct: 97 VASRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCS 136
Score = 33.1 bits (74), Expect(2) = 6e-08
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQS 350
YCK HF QLFKE G++N +S
Sbjct: 155 YCKHHFAQLFKEKGSYNHLIKS 176
>gb|AAD56951.1|AF184886_1 LIM domain protein WLIM2 [Nicotiana tabacum]
gi|1841464|emb|CAA71891.1| LIM-domain SF3 protein
[Nicotiana tabacum]
Length = 189
Score = 67.0 bits (162), Expect(2) = 1e-20
Identities = 31/37 (83%), Positives = 34/37 (91%), Gaps = 1/37 (2%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQSPAKSADK-APELKQA 392
YCKPHFEQLFKESGNFNKNFQSPAKSA+K PEL ++
Sbjct: 57 YCKPHFEQLFKESGNFNKNFQSPAKSAEKLTPELTRS 93
Score = 58.2 bits (139), Expect(2) = 1e-20
Identities = 23/33 (69%), Positives = 30/33 (90%)
Frame = +2
Query: 128 TQQKCKACDKTVYLMDQLTADGIVFHKSCFKCN 226
TQQKCKAC+KTVY ++ L+ADG+ +HKSCFKC+
Sbjct: 6 TQQKCKACEKTVYPVELLSADGVNYHKSCFKCS 38
Score = 45.4 bits (106), Expect(2) = 6e-08
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +2
Query: 113 GKCTSTQQKCKACDKTVYLMDQLTADGIVFHKSCFKCN 226
G + TQ+KC C KT Y ++++T + +HK+CFKC+
Sbjct: 99 GMFSGTQEKCATCGKTAYPLEKVTVENQSYHKTCFKCS 136
Score = 37.0 bits (84), Expect(2) = 6e-08
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +3
Query: 285 YCKPHFEQLFKESGNFNKNFQS 350
YCKPHF QLFKE G++N +S
Sbjct: 155 YCKPHFSQLFKEKGSYNHLIKS 176