BLASTX nr result
ID: Zingiber23_contig00019646
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00019646
(212 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002460586.1| hypothetical protein SORBIDRAFT_02g031330 [S... 73 4e-11
ref|XP_004957503.1| PREDICTED: histone-binding protein MSI1-like... 72 6e-11
ref|XP_004957502.1| PREDICTED: histone-binding protein MSI1-like... 72 6e-11
gb|ACF87682.1| unknown [Zea mays] gi|195624486|gb|ACG34073.1| WD... 71 2e-10
ref|XP_004289874.1| PREDICTED: WD-40 repeat-containing protein M... 69 5e-10
gb|EOX97656.1| Transducin family protein / WD-40 repeat family p... 69 6e-10
ref|XP_005767201.1| hypothetical protein EMIHUDRAFT_350324 [Emil... 69 6e-10
ref|NP_001105188.1| nucleosome/chromatin assembly factor 104 [Ze... 69 6e-10
ref|XP_006486738.1| PREDICTED: WD-40 repeat-containing protein M... 69 8e-10
ref|XP_006422592.1| hypothetical protein CICLE_v10028562mg [Citr... 69 8e-10
ref|XP_003369770.1| histone-binding protein RBBP4 [Trichinella s... 68 1e-09
ref|XP_002886076.1| hypothetical protein ARALYDRAFT_480561 [Arab... 68 1e-09
gb|EMJ01094.1| hypothetical protein PRUPE_ppa006618mg [Prunus pe... 68 1e-09
gb|ABB92268.1| MSI [Triticum aestivum] 68 1e-09
dbj|BAK05370.1| predicted protein [Hordeum vulgare subsp. vulgare] 68 1e-09
gb|ABC79303.1| putative retinoblastoma binding protein [Gossypiu... 68 1e-09
ref|XP_002306184.2| hypothetical protein POPTR_0004s18130g [Popu... 67 2e-09
ref|XP_006283702.1| hypothetical protein CARUB_v10004773mg, part... 67 2e-09
ref|XP_003562012.1| PREDICTED: WD-40 repeat-containing protein M... 67 2e-09
ref|XP_006409391.1| hypothetical protein EUTSA_v10022705mg [Eutr... 67 2e-09
>ref|XP_002460586.1| hypothetical protein SORBIDRAFT_02g031330 [Sorghum bicolor]
gi|241923963|gb|EER97107.1| hypothetical protein
SORBIDRAFT_02g031330 [Sorghum bicolor]
Length = 403
Score = 72.8 bits (177), Expect = 4e-11
Identities = 33/57 (57%), Positives = 37/57 (64%)
Frame = +1
Query: 40 GGREMEAAADAEGGSAVGAEEDYRVWKMNTAFLYDLVISHPLEWPSLTVQWLPGSSS 210
GG A+ ++ E+YR WK N A LYDLVISHPLEWPSLTVQWLP SS
Sbjct: 3 GGSSTPASPPPSAAASAAEMEEYRNWKKNAAVLYDLVISHPLEWPSLTVQWLPSESS 59
>ref|XP_004957503.1| PREDICTED: histone-binding protein MSI1-like isoform X2 [Setaria
italica]
Length = 406
Score = 72.4 bits (176), Expect = 6e-11
Identities = 33/57 (57%), Positives = 37/57 (64%)
Frame = +1
Query: 40 GGREMEAAADAEGGSAVGAEEDYRVWKMNTAFLYDLVISHPLEWPSLTVQWLPGSSS 210
GG A+ G + E+Y+ WK N A LYDLVISHPLEWPSLTVQWLP SS
Sbjct: 3 GGSSSPASPPPTAGPSAAEMEEYQNWKKNAAVLYDLVISHPLEWPSLTVQWLPSESS 59
>ref|XP_004957502.1| PREDICTED: histone-binding protein MSI1-like isoform X1 [Setaria
italica]
Length = 403
Score = 72.4 bits (176), Expect = 6e-11
Identities = 33/57 (57%), Positives = 37/57 (64%)
Frame = +1
Query: 40 GGREMEAAADAEGGSAVGAEEDYRVWKMNTAFLYDLVISHPLEWPSLTVQWLPGSSS 210
GG A+ G + E+Y+ WK N A LYDLVISHPLEWPSLTVQWLP SS
Sbjct: 3 GGSSSPASPPPTAGPSAAEMEEYQNWKKNAAVLYDLVISHPLEWPSLTVQWLPSESS 59
>gb|ACF87682.1| unknown [Zea mays] gi|195624486|gb|ACG34073.1| WD-40 repeat protein
MSI1 [Zea mays] gi|414888300|tpg|DAA64314.1| TPA:
nucleosome/chromatin assembly factor 104 isoform 1 [Zea
mays] gi|414888301|tpg|DAA64315.1| TPA:
nucleosome/chromatin assembly factor 104 isoform 2 [Zea
mays]
Length = 403
Score = 70.9 bits (172), Expect = 2e-10
Identities = 33/57 (57%), Positives = 37/57 (64%)
Frame = +1
Query: 40 GGREMEAAADAEGGSAVGAEEDYRVWKMNTAFLYDLVISHPLEWPSLTVQWLPGSSS 210
GG A+ ++ E+YR WK N A LYDLVISHPLEWPSLTVQWLP SS
Sbjct: 3 GGSSTPASPPPTVSASAANMEEYRNWKKNAAVLYDLVISHPLEWPSLTVQWLPSESS 59
>ref|XP_004289874.1| PREDICTED: WD-40 repeat-containing protein MSI3-like [Fragaria
vesca subsp. vesca]
Length = 405
Score = 69.3 bits (168), Expect = 5e-10
Identities = 30/48 (62%), Positives = 34/48 (70%)
Frame = +1
Query: 61 AADAEGGSAVGAEEDYRVWKMNTAFLYDLVISHPLEWPSLTVQWLPGS 204
A D E EE+Y VWK NT FLYDL+ISHPLEWPSLTV W+P +
Sbjct: 2 ADDHEQEDTAVVEEEYAVWKKNTPFLYDLIISHPLEWPSLTVHWVPSA 49
>gb|EOX97656.1| Transducin family protein / WD-40 repeat family protein [Theobroma
cacao]
Length = 408
Score = 68.9 bits (167), Expect = 6e-10
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = +1
Query: 97 EEDYRVWKMNTAFLYDLVISHPLEWPSLTVQWLPGSSS 210
EE++ VWK NT FLYDLVISHPLEWPSLTV W+P S S
Sbjct: 13 EEEFTVWKKNTPFLYDLVISHPLEWPSLTVHWVPSSPS 50
>ref|XP_005767201.1| hypothetical protein EMIHUDRAFT_350324 [Emiliania huxleyi CCMP1516]
gi|485617597|gb|EOD14772.1| hypothetical protein
EMIHUDRAFT_350324 [Emiliania huxleyi CCMP1516]
Length = 429
Score = 68.9 bits (167), Expect = 6e-10
Identities = 31/50 (62%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = +1
Query: 52 MEAAADAEGGSAVGA-EEDYRVWKMNTAFLYDLVISHPLEWPSLTVQWLP 198
M A +AEG S E+Y+VWK NT FLYDL+++H LEWPSLTVQWLP
Sbjct: 1 MSAPEEAEGSSLEQTINEEYKVWKKNTPFLYDLILTHALEWPSLTVQWLP 50
>ref|NP_001105188.1| nucleosome/chromatin assembly factor 104 [Zea mays]
gi|20977604|gb|AAM28229.1| nucleosome/chromatin assembly
factor 104 [Zea mays]
Length = 382
Score = 68.9 bits (167), Expect = 6e-10
Identities = 30/37 (81%), Positives = 31/37 (83%)
Frame = +1
Query: 100 EDYRVWKMNTAFLYDLVISHPLEWPSLTVQWLPGSSS 210
E+YR WK N A LYDLVISHPLEWPSLTVQWLP SS
Sbjct: 2 EEYRNWKKNAAVLYDLVISHPLEWPSLTVQWLPSESS 38
>ref|XP_006486738.1| PREDICTED: WD-40 repeat-containing protein MSI3-like [Citrus
sinensis]
Length = 406
Score = 68.6 bits (166), Expect = 8e-10
Identities = 28/46 (60%), Positives = 35/46 (76%)
Frame = +1
Query: 61 AADAEGGSAVGAEEDYRVWKMNTAFLYDLVISHPLEWPSLTVQWLP 198
AA+ + S EE++ VWK NT FLYDL++SHPLEWPSLTV W+P
Sbjct: 2 AAEEQDASLDQVEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVP 47
>ref|XP_006422592.1| hypothetical protein CICLE_v10028562mg [Citrus clementina]
gi|557524526|gb|ESR35832.1| hypothetical protein
CICLE_v10028562mg [Citrus clementina]
Length = 406
Score = 68.6 bits (166), Expect = 8e-10
Identities = 28/46 (60%), Positives = 35/46 (76%)
Frame = +1
Query: 61 AADAEGGSAVGAEEDYRVWKMNTAFLYDLVISHPLEWPSLTVQWLP 198
AA+ + S EE++ VWK NT FLYDL++SHPLEWPSLTV W+P
Sbjct: 2 AAEEQDASLDQVEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVP 47
>ref|XP_003369770.1| histone-binding protein RBBP4 [Trichinella spiralis]
gi|316965996|gb|EFV50632.1| histone-binding protein
RBBP4 [Trichinella spiralis]
Length = 478
Score = 68.2 bits (165), Expect = 1e-09
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +1
Query: 100 EDYRVWKMNTAFLYDLVISHPLEWPSLTVQWLPGSSS 210
EDY+VWK NT FLYDL+ISH LEWPSLTVQWLP + +
Sbjct: 67 EDYKVWKRNTPFLYDLLISHALEWPSLTVQWLPNAEN 103
>ref|XP_002886076.1| hypothetical protein ARALYDRAFT_480561 [Arabidopsis lyrata subsp.
lyrata] gi|297331916|gb|EFH62335.1| hypothetical protein
ARALYDRAFT_480561 [Arabidopsis lyrata subsp. lyrata]
Length = 415
Score = 68.2 bits (165), Expect = 1e-09
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = +1
Query: 97 EEDYRVWKMNTAFLYDLVISHPLEWPSLTVQWLPGSSS 210
EED+ VWK NT FLYDL+ISHPLEWPSLTV W+P + S
Sbjct: 15 EEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVPSTPS 52
>gb|EMJ01094.1| hypothetical protein PRUPE_ppa006618mg [Prunus persica]
Length = 403
Score = 67.8 bits (164), Expect = 1e-09
Identities = 29/47 (61%), Positives = 34/47 (72%)
Frame = +1
Query: 64 ADAEGGSAVGAEEDYRVWKMNTAFLYDLVISHPLEWPSLTVQWLPGS 204
A+ + A EE+Y VWK NT FLYDL+ISHPLEWPSLTV W P +
Sbjct: 2 AEDQDQDAALLEEEYAVWKKNTPFLYDLIISHPLEWPSLTVHWAPSA 48
>gb|ABB92268.1| MSI [Triticum aestivum]
Length = 428
Score = 67.8 bits (164), Expect = 1e-09
Identities = 33/57 (57%), Positives = 38/57 (66%)
Frame = +1
Query: 28 PFVFGGREMEAAADAEGGSAVGAEEDYRVWKMNTAFLYDLVISHPLEWPSLTVQWLP 198
P GG E E A+ E E+Y++WK NT FLYDLVI+H LEWPSLTVQWLP
Sbjct: 2 PKAGGGDEEEFRAEVEERLI---NEEYKIWKKNTPFLYDLVITHALEWPSLTVQWLP 55
>dbj|BAK05370.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 428
Score = 67.8 bits (164), Expect = 1e-09
Identities = 33/57 (57%), Positives = 38/57 (66%)
Frame = +1
Query: 28 PFVFGGREMEAAADAEGGSAVGAEEDYRVWKMNTAFLYDLVISHPLEWPSLTVQWLP 198
P GG E E A+ E E+Y++WK NT FLYDLVI+H LEWPSLTVQWLP
Sbjct: 2 PKAGGGDEEEFRAEVEERLI---NEEYKIWKKNTPFLYDLVITHALEWPSLTVQWLP 55
>gb|ABC79303.1| putative retinoblastoma binding protein [Gossypium hirsutum]
Length = 410
Score = 67.8 bits (164), Expect = 1e-09
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = +1
Query: 97 EEDYRVWKMNTAFLYDLVISHPLEWPSLTVQWLPGS 204
EE++ VWK NT FLYDLVISHPLEWPSLTV W+P S
Sbjct: 13 EEEFSVWKKNTPFLYDLVISHPLEWPSLTVHWVPSS 48
>ref|XP_002306184.2| hypothetical protein POPTR_0004s18130g [Populus trichocarpa]
gi|550341301|gb|EEE86695.2| hypothetical protein
POPTR_0004s18130g [Populus trichocarpa]
Length = 417
Score = 67.4 bits (163), Expect = 2e-09
Identities = 30/49 (61%), Positives = 35/49 (71%)
Frame = +1
Query: 52 MEAAADAEGGSAVGAEEDYRVWKMNTAFLYDLVISHPLEWPSLTVQWLP 198
M AA D + +E++ VWK NT LYDLVISHPLEWPSLTVQW+P
Sbjct: 1 MAAAEDDQEAGQDQLDEEFSVWKKNTPVLYDLVISHPLEWPSLTVQWVP 49
>ref|XP_006283702.1| hypothetical protein CARUB_v10004773mg, partial [Capsella rubella]
gi|482552407|gb|EOA16600.1| hypothetical protein
CARUB_v10004773mg, partial [Capsella rubella]
Length = 458
Score = 67.4 bits (163), Expect = 2e-09
Identities = 29/53 (54%), Positives = 36/53 (67%)
Frame = +1
Query: 46 REMEAAADAEGGSAVGAEEDYRVWKMNTAFLYDLVISHPLEWPSLTVQWLPGS 204
R+M A E EE++ VWK NT FLYDL+ISHPLEWPSLT+ W+P +
Sbjct: 35 RDMAAEEGKEESGLDQVEEEFSVWKRNTPFLYDLMISHPLEWPSLTLHWVPST 87
>ref|XP_003562012.1| PREDICTED: WD-40 repeat-containing protein MSI1-like [Brachypodium
distachyon]
Length = 429
Score = 67.4 bits (163), Expect = 2e-09
Identities = 32/53 (60%), Positives = 37/53 (69%)
Frame = +1
Query: 40 GGREMEAAADAEGGSAVGAEEDYRVWKMNTAFLYDLVISHPLEWPSLTVQWLP 198
GG E E A+ E E+Y++WK NT FLYDLVI+H LEWPSLTVQWLP
Sbjct: 7 GGDEEEFRAEVEERLI---NEEYKIWKKNTPFLYDLVITHALEWPSLTVQWLP 56
>ref|XP_006409391.1| hypothetical protein EUTSA_v10022705mg [Eutrema salsugineum]
gi|557110553|gb|ESQ50844.1| hypothetical protein
EUTSA_v10022705mg [Eutrema salsugineum]
Length = 415
Score = 67.0 bits (162), Expect = 2e-09
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = +1
Query: 97 EEDYRVWKMNTAFLYDLVISHPLEWPSLTVQWLPGS 204
EED+ VWK NT FLYDL+ISHPLEWPSLTV W+P +
Sbjct: 15 EEDFSVWKKNTPFLYDLMISHPLEWPSLTVHWVPST 50