BLASTX nr result
ID: Zingiber23_contig00019540
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00019540
(644 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001235961.1| uncharacterized protein LOC100499782 [Glycin... 135 1e-29
ref|XP_004160308.1| PREDICTED: U6 snRNA-associated Sm-like prote... 135 1e-29
ref|XP_002532432.1| snrnp sm protein, putative [Ricinus communis... 135 1e-29
ref|NP_001236557.1| uncharacterized protein LOC100306547 [Glycin... 134 2e-29
ref|XP_004249874.1| PREDICTED: U6 snRNA-associated Sm-like prote... 134 2e-29
ref|XP_004249873.1| PREDICTED: U6 snRNA-associated Sm-like prote... 134 2e-29
gb|ABR17247.1| unknown [Picea sitchensis] 134 2e-29
ref|XP_002300922.2| hypothetical protein POPTR_0002s06940g [Popu... 134 3e-29
ref|XP_003634512.1| PREDICTED: U6 snRNA-associated Sm-like prote... 134 3e-29
ref|XP_002307496.1| small nuclear ribonucleoprotein [Populus tri... 134 3e-29
gb|ESW24417.1| hypothetical protein PHAVU_004G129000g [Phaseolus... 133 4e-29
ref|XP_006434453.1| hypothetical protein CICLE_v10002950mg [Citr... 133 4e-29
gb|AFK35032.1| unknown [Lotus japonicus] gi|388511495|gb|AFK4380... 133 4e-29
gb|EOY16704.1| Small nuclear ribonucleoprotein family protein [T... 132 7e-29
ref|XP_004290522.1| PREDICTED: U6 snRNA-associated Sm-like prote... 132 9e-29
gb|EMJ16383.1| hypothetical protein PRUPE_ppa013907mg [Prunus pe... 132 9e-29
gb|EMJ16382.1| hypothetical protein PRUPE_ppa013907mg [Prunus pe... 132 9e-29
ref|XP_003607812.1| U6 snRNA-associated Sm-like protein LSm3 [Me... 132 1e-28
gb|EXC25394.1| hypothetical protein L484_016776 [Morus notabilis] 131 1e-28
gb|EMJ01842.1| hypothetical protein PRUPE_ppa013901mg [Prunus pe... 131 1e-28
>ref|NP_001235961.1| uncharacterized protein LOC100499782 [Glycine max]
gi|255626487|gb|ACU13588.1| unknown [Glycine max]
Length = 97
Score = 135 bits (340), Expect = 1e-29
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = -3
Query: 540 MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEILTTVE 361
MATEEES VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEI+TTVE
Sbjct: 1 MATEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVE 60
Query: 360 IDDETYEEIV 331
IDDETYEEIV
Sbjct: 61 IDDETYEEIV 70
>ref|XP_004160308.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like [Cucumis
sativus]
Length = 97
Score = 135 bits (339), Expect = 1e-29
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = -3
Query: 540 MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEILTTVE 361
MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEE +TTVE
Sbjct: 1 MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEESVTTVE 60
Query: 360 IDDETYEEIV 331
IDDETYEEIV
Sbjct: 61 IDDETYEEIV 70
>ref|XP_002532432.1| snrnp sm protein, putative [Ricinus communis]
gi|223527852|gb|EEF29947.1| snrnp sm protein, putative
[Ricinus communis] gi|561025339|gb|ESW24024.1|
hypothetical protein PHAVU_004G095700g [Phaseolus
vulgaris]
Length = 97
Score = 135 bits (339), Expect = 1e-29
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = -3
Query: 540 MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEILTTVE 361
MATEEES VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEE++TTVE
Sbjct: 1 MATEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEVVTTVE 60
Query: 360 IDDETYEEIV 331
IDDETYEEIV
Sbjct: 61 IDDETYEEIV 70
>ref|NP_001236557.1| uncharacterized protein LOC100306547 [Glycine max]
gi|255628849|gb|ACU14769.1| unknown [Glycine max]
Length = 97
Score = 134 bits (338), Expect = 2e-29
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = -3
Query: 540 MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEILTTVE 361
M+TEEES VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEI+TTVE
Sbjct: 1 MSTEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIITTVE 60
Query: 360 IDDETYEEIV 331
IDDETYEEIV
Sbjct: 61 IDDETYEEIV 70
>ref|XP_004249874.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like isoform 2
[Solanum lycopersicum] gi|565368784|ref|XP_006351021.1|
PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like
[Solanum tuberosum]
Length = 97
Score = 134 bits (337), Expect = 2e-29
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = -3
Query: 540 MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEILTTVE 361
M +EEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEI+TTVE
Sbjct: 1 MGSEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVE 60
Query: 360 IDDETYEEIV 331
IDDETYEEIV
Sbjct: 61 IDDETYEEIV 70
>ref|XP_004249873.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like isoform 1
[Solanum lycopersicum]
Length = 104
Score = 134 bits (337), Expect = 2e-29
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = -3
Query: 540 MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEILTTVE 361
M +EEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEI+TTVE
Sbjct: 1 MGSEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVE 60
Query: 360 IDDETYEEIV 331
IDDETYEEIV
Sbjct: 61 IDDETYEEIV 70
>gb|ABR17247.1| unknown [Picea sitchensis]
Length = 97
Score = 134 bits (337), Expect = 2e-29
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = -3
Query: 540 MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEILTTVE 361
MATEE+S VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEE++TTVE
Sbjct: 1 MATEEDSAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEVITTVE 60
Query: 360 IDDETYEEIV 331
IDDETYEEIV
Sbjct: 61 IDDETYEEIV 70
>ref|XP_002300922.2| hypothetical protein POPTR_0002s06940g [Populus trichocarpa]
gi|550344440|gb|EEE80195.2| hypothetical protein
POPTR_0002s06940g [Populus trichocarpa]
Length = 133
Score = 134 bits (336), Expect = 3e-29
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = -3
Query: 540 MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEILTTVE 361
MA+EEES VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEI+TTVE
Sbjct: 37 MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVE 96
Query: 360 IDDETYEEIV 331
IDDETYEEIV
Sbjct: 97 IDDETYEEIV 106
>ref|XP_003634512.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like isoform 2
[Vitis vinifera] gi|296081172|emb|CBI18198.3| unnamed
protein product [Vitis vinifera]
Length = 109
Score = 134 bits (336), Expect = 3e-29
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = -3
Query: 540 MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEILTTVE 361
MA+EEES VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEI+TTVE
Sbjct: 1 MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVE 60
Query: 360 IDDETYEEIV 331
IDDETYEEIV
Sbjct: 61 IDDETYEEIV 70
>ref|XP_002307496.1| small nuclear ribonucleoprotein [Populus trichocarpa]
gi|359493111|ref|XP_002266320.2| PREDICTED: U6
snRNA-associated Sm-like protein LSm3-like isoform 1
[Vitis vinifera] gi|222856945|gb|EEE94492.1| small
nuclear ribonucleoprotein [Populus trichocarpa]
Length = 97
Score = 134 bits (336), Expect = 3e-29
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = -3
Query: 540 MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEILTTVE 361
MA+EEES VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEI+TTVE
Sbjct: 1 MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVE 60
Query: 360 IDDETYEEIV 331
IDDETYEEIV
Sbjct: 61 IDDETYEEIV 70
>gb|ESW24417.1| hypothetical protein PHAVU_004G129000g [Phaseolus vulgaris]
Length = 97
Score = 133 bits (335), Expect = 4e-29
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = -3
Query: 540 MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEILTTVE 361
M TEEES VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEE++TTVE
Sbjct: 1 MTTEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEVVTTVE 60
Query: 360 IDDETYEEIV 331
IDDETYEEIV
Sbjct: 61 IDDETYEEIV 70
>ref|XP_006434453.1| hypothetical protein CICLE_v10002950mg [Citrus clementina]
gi|568838092|ref|XP_006473051.1| PREDICTED: U6
snRNA-associated Sm-like protein LSm3-like [Citrus
sinensis] gi|557536575|gb|ESR47693.1| hypothetical
protein CICLE_v10002950mg [Citrus clementina]
Length = 97
Score = 133 bits (335), Expect = 4e-29
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = -3
Query: 540 MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEILTTVE 361
MA+EEES VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEE++TTVE
Sbjct: 1 MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEVVTTVE 60
Query: 360 IDDETYEEIV 331
IDDETYEEIV
Sbjct: 61 IDDETYEEIV 70
>gb|AFK35032.1| unknown [Lotus japonicus] gi|388511495|gb|AFK43809.1| unknown
[Lotus japonicus]
Length = 97
Score = 133 bits (335), Expect = 4e-29
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = -3
Query: 540 MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEILTTVE 361
MA EEES VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEI+TTVE
Sbjct: 1 MAAEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVE 60
Query: 360 IDDETYEEIV 331
IDDETYEEIV
Sbjct: 61 IDDETYEEIV 70
>gb|EOY16704.1| Small nuclear ribonucleoprotein family protein [Theobroma cacao]
Length = 97
Score = 132 bits (333), Expect = 7e-29
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = -3
Query: 540 MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEILTTVE 361
MA+E+ES VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEI+TTVE
Sbjct: 1 MASEDESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVE 60
Query: 360 IDDETYEEIV 331
IDDETYEEIV
Sbjct: 61 IDDETYEEIV 70
>ref|XP_004290522.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like [Fragaria
vesca subsp. vesca]
Length = 97
Score = 132 bits (332), Expect = 9e-29
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = -3
Query: 540 MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEILTTVE 361
MA+EEES VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEI+T+VE
Sbjct: 1 MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTSVE 60
Query: 360 IDDETYEEIV 331
IDDETYEEIV
Sbjct: 61 IDDETYEEIV 70
>gb|EMJ16383.1| hypothetical protein PRUPE_ppa013907mg [Prunus persica]
gi|462411335|gb|EMJ16384.1| hypothetical protein
PRUPE_ppa013907mg [Prunus persica]
Length = 91
Score = 132 bits (332), Expect = 9e-29
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = -3
Query: 540 MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEILTTVE 361
MA+EEES VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEI+T+VE
Sbjct: 1 MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTSVE 60
Query: 360 IDDETYEEIV 331
IDDETYEEIV
Sbjct: 61 IDDETYEEIV 70
>gb|EMJ16382.1| hypothetical protein PRUPE_ppa013907mg [Prunus persica]
Length = 96
Score = 132 bits (332), Expect = 9e-29
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = -3
Query: 540 MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEILTTVE 361
MA+EEES VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEI+T+VE
Sbjct: 1 MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTSVE 60
Query: 360 IDDETYEEIV 331
IDDETYEEIV
Sbjct: 61 IDDETYEEIV 70
>ref|XP_003607812.1| U6 snRNA-associated Sm-like protein LSm3 [Medicago truncatula]
gi|355508867|gb|AES90009.1| U6 snRNA-associated Sm-like
protein LSm3 [Medicago truncatula]
Length = 98
Score = 132 bits (331), Expect = 1e-28
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = -3
Query: 534 TEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEILTTVEID 355
TEEES VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEI+TTVEID
Sbjct: 4 TEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEID 63
Query: 354 DETYEEIV 331
DETYEEIV
Sbjct: 64 DETYEEIV 71
>gb|EXC25394.1| hypothetical protein L484_016776 [Morus notabilis]
Length = 98
Score = 131 bits (330), Expect = 1e-28
Identities = 65/68 (95%), Positives = 67/68 (98%)
Frame = -3
Query: 534 TEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEILTTVEID 355
TEEES VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEE++TTVEID
Sbjct: 4 TEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEVVTTVEID 63
Query: 354 DETYEEIV 331
DETYEEIV
Sbjct: 64 DETYEEIV 71
>gb|EMJ01842.1| hypothetical protein PRUPE_ppa013901mg [Prunus persica]
Length = 97
Score = 131 bits (330), Expect = 1e-28
Identities = 64/70 (91%), Positives = 69/70 (98%)
Frame = -3
Query: 540 MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEILTTVE 361
MA+EEES VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEE++T++E
Sbjct: 1 MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEVVTSIE 60
Query: 360 IDDETYEEIV 331
IDDETYEEIV
Sbjct: 61 IDDETYEEIV 70