BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00019272
         (271 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containi...    65   1e-08
ref|XP_002531339.1| pentatricopeptide repeat-containing protein,...    61   2e-07
ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containi...    60   4e-07
ref|XP_006846078.1| hypothetical protein AMTR_s00012p00087690 [A...    56   4e-06
gb|EMJ09267.1| hypothetical protein PRUPE_ppa001736mg [Prunus pe...    56   4e-06
ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containi...    56   6e-06

>ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
           gi|449525343|ref|XP_004169677.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 34/88 (38%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
 Frame = +1

Query: 13  FESHPLQHKSLPFASFAS--IRGLASLSTAFDSNPMRQLPPNFTPKDLLGIIFRQRDAEA 186
           F S P+ + S+ F++  S  +   +S ++   S+ +  LPP+FTPK L+  + RQ D  A
Sbjct: 20  FSSKPISNSSIFFSASLSDQLASSSSSNSTSSSHIVHHLPPDFTPKQLIETLRRQTDEVA 79

Query: 187 SLDLLNWALLQSHFRPTPSVFEEVLRQL 270
           +L + NWA  Q +F P+ SV+EE+LR+L
Sbjct: 80  ALRVFNWASKQPNFVPSSSVYEEILRKL 107


>ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529061|gb|EEF31046.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 630

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 33/79 (41%), Positives = 45/79 (56%)
 Frame = +1

Query: 34  HKSLPFASFASIRGLASLSTAFDSNPMRQLPPNFTPKDLLGIIFRQRDAEASLDLLNWAL 213
           H+  PF+ F      ++LS A        L  NFTP  LL  + RQ D  A+L LL+WA 
Sbjct: 19  HQHPPFSFFHKPISNSTLSFASTQQHTATLSSNFTPAQLLDTLRRQNDETAALRLLSWAS 78

Query: 214 LQSHFRPTPSVFEEVLRQL 270
            Q +FRP  S++EE+LR+L
Sbjct: 79  KQPNFRPNSSIYEEILRKL 97


>ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
 Frame = +1

Query: 34  HKSLPFASFASIRGL-----ASLSTAFDS---NPMRQLPPNFTPKDLLGIIFRQRDAEAS 189
           H   PF+   S          ++S +F +   +P  QLP NFTPK L   + RQ D ++ 
Sbjct: 29  HNCKPFSKLISFTSTHHHDQQAVSPSFSTLSPSPTTQLPQNFTPKQLRDALRRQSDEDSI 88

Query: 190 LDLLNWALLQSHFRPTPSVFEEVLRQL 270
           LDLL+WA  Q +F P+  ++EEVLR+L
Sbjct: 89  LDLLDWASKQPNFVPSSVIYEEVLRKL 115


>ref|XP_006846078.1| hypothetical protein AMTR_s00012p00087690 [Amborella trichopoda]
           gi|548848848|gb|ERN07753.1| hypothetical protein
           AMTR_s00012p00087690 [Amborella trichopoda]
          Length = 805

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/65 (40%), Positives = 42/65 (64%)
 Frame = +1

Query: 76  LASLSTAFDSNPMRQLPPNFTPKDLLGIIFRQRDAEASLDLLNWALLQSHFRPTPSVFEE 255
           ++S   +   + + Q+PP+FT +DLL I+ RQ+DAEA+L + N+A     F   PS++E 
Sbjct: 87  ISSKPNSLSPSSIHQIPPDFTTEDLLSILNRQKDAEATLQIFNFASKHPSFITEPSIYEA 146

Query: 256 VLRQL 270
           VL+ L
Sbjct: 147 VLKSL 151


>gb|EMJ09267.1| hypothetical protein PRUPE_ppa001736mg [Prunus persica]
          Length = 772

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/84 (36%), Positives = 46/84 (54%)
 Frame = +1

Query: 19  SHPLQHKSLPFASFASIRGLASLSTAFDSNPMRQLPPNFTPKDLLGIIFRQRDAEASLDL 198
           S PL H      + +S+     +ST         LPP+FTP+ LL  + RQ D  ++L L
Sbjct: 37  SFPLLHHHDQLVTHSSLSYSTPVST-------HHLPPDFTPQQLLDTLRRQNDESSALRL 89

Query: 199 LNWALLQSHFRPTPSVFEEVLRQL 270
            +WA  Q +F P  +++EEVLR+L
Sbjct: 90  FDWASKQPNFTPNSTIYEEVLRKL 113


>ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
 Frame = +1

Query: 31  QHKSLPFASFASIRGLASLSTAFDSNPM---RQLPPNFTPKDLLGIIFRQRDAEASLDLL 201
           Q  + PF+   S     S S+A  S+       LPP+F+P  LL ++ RQ D+ ++L L 
Sbjct: 20  QRHTTPFSFSLSSTFRFSSSSALSSSTSATHHPLPPDFSPSQLLDLLRRQPDSSSALSLF 79

Query: 202 NWALLQSHFRPTPSVFEEVLRQL 270
            WA  Q ++   PSVF E+LRQL
Sbjct: 80  QWASAQPNYSAHPSVFHELLRQL 102