BLASTX nr result

ID: Zingiber23_contig00019090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00019090
         (203 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30150.3| unnamed protein product [Vitis vinifera]               73   4e-11
ref|XP_002266033.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3...    73   4e-11
emb|CAN68707.1| hypothetical protein VITISV_001643 [Vitis vinifera]    72   6e-11
gb|AFW88256.1| hypothetical protein ZEAMMB73_888595 [Zea mays]         70   2e-10
gb|AFW88255.1| hypothetical protein ZEAMMB73_888595 [Zea mays]         70   2e-10
gb|AFW88253.1| transposon protein [Zea mays]                           70   2e-10
ref|NP_001152554.1| LOC100286194 [Zea mays] gi|195657439|gb|ACG4...    70   2e-10
gb|ACF87686.1| unknown [Zea mays]                                      70   2e-10
ref|XP_004494073.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3...    70   3e-10
ref|XP_004494072.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3...    70   3e-10
ref|XP_004494071.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3...    70   3e-10
ref|XP_004983769.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3...    69   8e-10
ref|XP_006354380.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3...    67   2e-09
gb|EMS45200.1| Zinc finger protein GIS2 [Triticum urartu]              67   2e-09
gb|AAK20059.1|AC025783_19 hypothetical protein [Oryza sativa Jap...    67   2e-09
ref|NP_001065210.2| Os10g0545600 [Oryza sativa Japonica Group] g...    67   2e-09
gb|EEE51342.1| hypothetical protein OsJ_32345 [Oryza sativa Japo...    67   2e-09
gb|EAY79407.1| hypothetical protein OsI_34535 [Oryza sativa Indi...    67   2e-09
ref|XP_006853476.1| hypothetical protein AMTR_s00032p00201500 [A...    67   2e-09
ref|XP_004246613.1| PREDICTED: uncharacterized protein LOC101258...    67   3e-09

>emb|CBI30150.3| unnamed protein product [Vitis vinifera]
          Length = 610

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 36/65 (55%), Positives = 44/65 (67%)
 Frame = +1

Query: 4   VFSASSSGPCVWEVGFNCRRPFLIPEMQNRGVCISLACCGSSDTAVATFRPKFGLLDDIT 183
           + SASS G C W  G +  RPFL+PE +N GVCISLA C SSD  V+TFRPK  + ++I 
Sbjct: 430 LLSASSVGLCQWNFGGSEERPFLVPETKNHGVCISLAHCPSSDNIVSTFRPKVEMSNEIA 489

Query: 184 PSQLS 198
            SQ S
Sbjct: 490 VSQYS 494


>ref|XP_002266033.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Vitis vinifera]
          Length = 567

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 36/65 (55%), Positives = 44/65 (67%)
 Frame = +1

Query: 4   VFSASSSGPCVWEVGFNCRRPFLIPEMQNRGVCISLACCGSSDTAVATFRPKFGLLDDIT 183
           + SASS G C W  G +  RPFL+PE +N GVCISLA C SSD  V+TFRPK  + ++I 
Sbjct: 387 LLSASSVGLCQWNFGGSEERPFLVPETKNHGVCISLAHCPSSDNIVSTFRPKVEMSNEIA 446

Query: 184 PSQLS 198
            SQ S
Sbjct: 447 VSQYS 451


>emb|CAN68707.1| hypothetical protein VITISV_001643 [Vitis vinifera]
          Length = 514

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 36/65 (55%), Positives = 44/65 (67%)
 Frame = +1

Query: 4   VFSASSSGPCVWEVGFNCRRPFLIPEMQNRGVCISLACCGSSDTAVATFRPKFGLLDDIT 183
           + SASS G C W  G +  RPFL+PE +N GVCISLA C SSD  V+TFRPK  + ++I 
Sbjct: 236 LLSASSVGLCQWNFGGSEERPFLVPETKNHGVCISLAHCPSSDBIVSTFRPKVEMSNEIA 295

Query: 184 PSQLS 198
            SQ S
Sbjct: 296 VSQYS 300


>gb|AFW88256.1| hypothetical protein ZEAMMB73_888595 [Zea mays]
          Length = 407

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 38/68 (55%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1   RVFSASSSGPCVWEVGFNCRRPFLIPEMQNRGVCISLACCG-SSDTAVATFRPKFGLLDD 177
           +VFSASS GPCVW+   N  RP L+  M+N+GVCISLAC   SSD  VA++RP+  L D 
Sbjct: 226 KVFSASSIGPCVWDASEN--RPSLVSGMENQGVCISLACSSPSSDVLVASYRPRVELPDA 283

Query: 178 ITPSQLSS 201
           I  SQ S+
Sbjct: 284 IATSQAST 291


>gb|AFW88255.1| hypothetical protein ZEAMMB73_888595 [Zea mays]
          Length = 299

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 38/68 (55%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1   RVFSASSSGPCVWEVGFNCRRPFLIPEMQNRGVCISLACCG-SSDTAVATFRPKFGLLDD 177
           +VFSASS GPCVW+   N  RP L+  M+N+GVCISLAC   SSD  VA++RP+  L D 
Sbjct: 118 KVFSASSIGPCVWDASEN--RPSLVSGMENQGVCISLACSSPSSDVLVASYRPRVELPDA 175

Query: 178 ITPSQLSS 201
           I  SQ S+
Sbjct: 176 IATSQAST 183


>gb|AFW88253.1| transposon protein [Zea mays]
          Length = 380

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 38/68 (55%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1   RVFSASSSGPCVWEVGFNCRRPFLIPEMQNRGVCISLACCG-SSDTAVATFRPKFGLLDD 177
           +VFSASS GPCVW+   N  RP L+  M+N+GVCISLAC   SSD  VA++RP+  L D 
Sbjct: 278 KVFSASSIGPCVWDASEN--RPSLVSGMENQGVCISLACSSPSSDVLVASYRPRVELPDA 335

Query: 178 ITPSQLSS 201
           I  SQ S+
Sbjct: 336 IATSQAST 343


>ref|NP_001152554.1| LOC100286194 [Zea mays] gi|195657439|gb|ACG48187.1| transposon
           protein [Zea mays]
          Length = 567

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 38/68 (55%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1   RVFSASSSGPCVWEVGFNCRRPFLIPEMQNRGVCISLACCG-SSDTAVATFRPKFGLLDD 177
           +VFSASS GPCVW+   N  RP L+  M+N+GVCISLAC   SSD  VA++RP+  L D 
Sbjct: 386 KVFSASSIGPCVWDASEN--RPSLVSGMENQGVCISLACSSPSSDVLVASYRPRVELPDA 443

Query: 178 ITPSQLSS 201
           I  SQ S+
Sbjct: 444 IATSQAST 451


>gb|ACF87686.1| unknown [Zea mays]
          Length = 434

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 38/68 (55%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1   RVFSASSSGPCVWEVGFNCRRPFLIPEMQNRGVCISLACCG-SSDTAVATFRPKFGLLDD 177
           +VFSASS GPCVW+   N  RP L+  M+N+GVCISLAC   SSD  VA++RP+  L D 
Sbjct: 253 KVFSASSIGPCVWDASEN--RPSLVSGMENQGVCISLACSSPSSDVLVASYRPRVELPDA 310

Query: 178 ITPSQLSS 201
           I  SQ S+
Sbjct: 311 IATSQAST 318


>ref|XP_004494073.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like isoform X3 [Cicer
           arietinum]
          Length = 631

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 34/65 (52%), Positives = 43/65 (66%)
 Frame = +1

Query: 4   VFSASSSGPCVWEVGFNCRRPFLIPEMQNRGVCISLACCGSSDTAVATFRPKFGLLDDIT 183
           + SAS+ GPC W++     RPF++PE  N+GVCISLA C SSD  V ++RPKF  L D  
Sbjct: 454 ILSASAIGPCQWDIDSE-ERPFMVPETDNQGVCISLAYCPSSDDIVVSYRPKFNTLMDAP 512

Query: 184 PSQLS 198
            SQ S
Sbjct: 513 LSQPS 517


>ref|XP_004494072.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like isoform X2 [Cicer
           arietinum]
          Length = 658

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 34/65 (52%), Positives = 43/65 (66%)
 Frame = +1

Query: 4   VFSASSSGPCVWEVGFNCRRPFLIPEMQNRGVCISLACCGSSDTAVATFRPKFGLLDDIT 183
           + SAS+ GPC W++     RPF++PE  N+GVCISLA C SSD  V ++RPKF  L D  
Sbjct: 481 ILSASAIGPCQWDIDSE-ERPFMVPETDNQGVCISLAYCPSSDDIVVSYRPKFNTLMDAP 539

Query: 184 PSQLS 198
            SQ S
Sbjct: 540 LSQPS 544


>ref|XP_004494071.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like isoform X1 [Cicer
           arietinum]
          Length = 660

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 34/65 (52%), Positives = 43/65 (66%)
 Frame = +1

Query: 4   VFSASSSGPCVWEVGFNCRRPFLIPEMQNRGVCISLACCGSSDTAVATFRPKFGLLDDIT 183
           + SAS+ GPC W++     RPF++PE  N+GVCISLA C SSD  V ++RPKF  L D  
Sbjct: 483 ILSASAIGPCQWDIDSE-ERPFMVPETDNQGVCISLAYCPSSDDIVVSYRPKFNTLMDAP 541

Query: 184 PSQLS 198
            SQ S
Sbjct: 542 LSQPS 546


>ref|XP_004983769.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Setaria italica]
          Length = 575

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 36/64 (56%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
 Frame = +1

Query: 4   VFSASSSGPCVWEVGFNCRRPFLIPEMQNRGVCISLACC-GSSDTAVATFRPKFGLLDDI 180
           VFSASS GPC+W+V  +  RP L+  M+N+GVCISLAC   SSD  VA++RPK  L DD 
Sbjct: 393 VFSASSIGPCIWDVDGSEDRPNLLSGMENQGVCISLACAPPSSDLLVASYRPKVELQDDS 452

Query: 181 TPSQ 192
              Q
Sbjct: 453 ATPQ 456


>ref|XP_006354380.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Solanum
           tuberosum]
          Length = 642

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 32/64 (50%), Positives = 41/64 (64%)
 Frame = +1

Query: 4   VFSASSSGPCVWEVGFNCRRPFLIPEMQNRGVCISLACCGSSDTAVATFRPKFGLLDDIT 183
           V SASS G C W  G    RP L+PE +N+G+CISLAC   +D  VA+FRPK  +  D+ 
Sbjct: 462 VLSASSVGLCHWNFGSGNERPCLVPESENQGICISLACGDRNDDIVASFRPKLEISGDMA 521

Query: 184 PSQL 195
            SQ+
Sbjct: 522 ASQV 525


>gb|EMS45200.1| Zinc finger protein GIS2 [Triticum urartu]
          Length = 771

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
 Frame = +1

Query: 4   VFSASSSGPCVWEVGFNCRRPFLIPEMQNRGVCISLACCG-SSDTAVATFRPKFGLLDDI 180
           + SASS GPC+W+V  N  RP L+  M+N+GVCISLAC   SSD  VA+FRP+     D 
Sbjct: 269 IISASSIGPCIWDVDGNENRPNLLTGMENQGVCISLACAAPSSDLIVASFRPRVEFSGDG 328

Query: 181 TPSQL 195
           + SQ+
Sbjct: 329 SASQM 333


>gb|AAK20059.1|AC025783_19 hypothetical protein [Oryza sativa Japonica Group]
           gi|31433364|gb|AAP54883.1| Zinc finger, C3HC4 type
           family protein, expressed [Oryza sativa Japonica Group]
          Length = 499

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 36/62 (58%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
 Frame = +1

Query: 1   RVFSASSSGPCVWEVGFNCRRPFLIPEMQNRGVCISLAC-CGSSDTAVATFRPKFGLLDD 177
           +V SASS GPC+W+V  +  RP L+  M+N GVCISLAC   SSD  VA+FRPK  L DD
Sbjct: 313 KVISASSIGPCIWDVDGSRNRPDLLNGMENHGVCISLACNPPSSDLLVASFRPKVELSDD 372

Query: 178 IT 183
            T
Sbjct: 373 GT 374


>ref|NP_001065210.2| Os10g0545600 [Oryza sativa Japonica Group]
           gi|255679598|dbj|BAF27124.2| Os10g0545600 [Oryza sativa
           Japonica Group]
          Length = 475

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 36/62 (58%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
 Frame = +1

Query: 1   RVFSASSSGPCVWEVGFNCRRPFLIPEMQNRGVCISLAC-CGSSDTAVATFRPKFGLLDD 177
           +V SASS GPC+W+V  +  RP L+  M+N GVCISLAC   SSD  VA+FRPK  L DD
Sbjct: 289 KVISASSIGPCIWDVDGSRNRPDLLNGMENHGVCISLACNPPSSDLLVASFRPKVELSDD 348

Query: 178 IT 183
            T
Sbjct: 349 GT 350


>gb|EEE51342.1| hypothetical protein OsJ_32345 [Oryza sativa Japonica Group]
          Length = 453

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 36/62 (58%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
 Frame = +1

Query: 1   RVFSASSSGPCVWEVGFNCRRPFLIPEMQNRGVCISLAC-CGSSDTAVATFRPKFGLLDD 177
           +V SASS GPC+W+V  +  RP L+  M+N GVCISLAC   SSD  VA+FRPK  L DD
Sbjct: 267 KVISASSIGPCIWDVDGSRNRPDLLNGMENHGVCISLACNPPSSDLLVASFRPKVELSDD 326

Query: 178 IT 183
            T
Sbjct: 327 GT 328


>gb|EAY79407.1| hypothetical protein OsI_34535 [Oryza sativa Indica Group]
          Length = 521

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 36/62 (58%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
 Frame = +1

Query: 1   RVFSASSSGPCVWEVGFNCRRPFLIPEMQNRGVCISLAC-CGSSDTAVATFRPKFGLLDD 177
           +V SASS GPC+W+V  +  RP L+  M+N GVCISLAC   SSD  VA+FRPK  L DD
Sbjct: 335 KVISASSIGPCIWDVDGSRNRPDLLNGMENHGVCISLACNPPSSDLLVASFRPKVELSDD 394

Query: 178 IT 183
            T
Sbjct: 395 GT 396


>ref|XP_006853476.1| hypothetical protein AMTR_s00032p00201500 [Amborella trichopoda]
           gi|548857129|gb|ERN14943.1| hypothetical protein
           AMTR_s00032p00201500 [Amborella trichopoda]
          Length = 316

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 32/63 (50%), Positives = 43/63 (68%)
 Frame = +1

Query: 4   VFSASSSGPCVWEVGFNCRRPFLIPEMQNRGVCISLACCGSSDTAVATFRPKFGLLDDIT 183
           + SAS+ GPC+W VG    RP L+P  +++GVCISLA C S+ + VATFRPK  + +D  
Sbjct: 139 LLSASAIGPCLWRVGVT-ERPCLVPGFEDQGVCISLAHCNSTKSTVATFRPKVSMSNDYA 197

Query: 184 PSQ 192
            SQ
Sbjct: 198 LSQ 200


>ref|XP_004246613.1| PREDICTED: uncharacterized protein LOC101258298 [Solanum
           lycopersicum]
          Length = 639

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 32/64 (50%), Positives = 42/64 (65%)
 Frame = +1

Query: 4   VFSASSSGPCVWEVGFNCRRPFLIPEMQNRGVCISLACCGSSDTAVATFRPKFGLLDDIT 183
           V SASS G C W  G +  RP L+PE +N+G+CISLAC   +D  VA+FRPK  +  D+ 
Sbjct: 459 VLSASSVGLCHWNFGSSDVRPCLVPESENQGICISLACGDRNDDIVASFRPKLEISGDMA 518

Query: 184 PSQL 195
            SQ+
Sbjct: 519 ASQV 522


Top