BLASTX nr result
ID: Zingiber23_contig00019062
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00019062
(1432 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004173875.1| PREDICTED: DNA-directed RNA polymerase subun... 218 e-102
ref|XP_003606056.1| 30S ribosomal protein S11 [Medicago truncatu... 218 e-101
ref|YP_007475736.1| RNA polymerase alpha subunit [Zingiber spect... 268 5e-69
gb|AGE93401.1| RNA polymerase alpha subunit [Alpinia zerumbet] 265 3e-68
ref|YP_008854626.1| RNA polymerase alpha subunit [Curcuma roscoe... 265 4e-68
gb|AHA12787.1| RNA polymerase alpha subunit [Canna indica] 249 2e-63
ref|YP_007475651.1| RNA polymerase alpha subunit [Heliconia coll... 249 2e-63
gb|AEZ49460.1| RNA polymerase alpha subunit, partial [Pitcairnia... 248 3e-63
gb|AHA12956.1| RNA polymerase alpha subunit [Monocostus uniflorus] 246 1e-62
ref|YP_008854542.1| RNA polymerase alpha subunit [Ravenala madag... 246 2e-62
ref|YP_008854457.1| RNA polymerase alpha subunit [Musa textilis]... 245 3e-62
gb|AEX94399.1| RNA polymerase alpha subunit (chloroplast) [Iris ... 245 3e-62
gb|ABU85470.1| RNA polymerase alpha subunit [Musa acuminata] gi|... 245 3e-62
gb|AHH24305.1| RNA polymerase subunit A (chloroplast) [Japonolir... 244 7e-62
gb|AEZ49453.1| RNA polymerase alpha subunit [Lomandra longifolia] 244 7e-62
gb|AEZ49449.1| RNA polymerase alpha subunit, partial [Iris virgi... 244 7e-62
gb|AEX94409.1| RNA polymerase alpha subunit (chloroplast) [Maian... 244 7e-62
gb|AEX94407.1| RNA polymerase alpha subunit (chloroplast) [Ruscu... 244 7e-62
gb|AEX94403.1| RNA polymerase alpha subunit (chloroplast) [Dasyl... 244 7e-62
gb|AEX94402.1| RNA polymerase alpha subunit (chloroplast) [Calib... 244 7e-62
>ref|XP_004173875.1| PREDICTED: DNA-directed RNA polymerase subunit alpha-like [Cucumis
sativus]
Length = 466
Score = 218 bits (554), Expect(2) = e-102
Identities = 108/134 (80%), Positives = 120/134 (89%)
Frame = +3
Query: 1029 REEVVGSTRTLQWRCVESRIDSNRLYYGRFILCPLMKGQADTMGIAMRRALLGEIEGTCI 1208
R+++ STRTL+W+CVESR DS RLYYGRFIL PLMKGQ DT+GIAMR+ALLGEIEGTCI
Sbjct: 136 RQKIRVSTRTLKWKCVESRADSKRLYYGRFILSPLMKGQGDTIGIAMRKALLGEIEGTCI 195
Query: 1209 TCAKFEKVPHEYSTIVGIEESVHEILLNLKEIVLRSNIHGVRDASIYVKGPKYVTAQDII 1388
T AK EK+PHEYSTIVGI+ESVHEIL+NLKEIVLRSN++G RDASI VKGP VTAQDII
Sbjct: 196 TRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDII 255
Query: 1389 SPPSVEIVDTTQHI 1430
PPSVEIVD TQHI
Sbjct: 256 LPPSVEIVDNTQHI 269
Score = 184 bits (467), Expect(2) = e-102
Identities = 90/105 (85%), Positives = 96/105 (91%)
Frame = +1
Query: 610 PKGIIHVQASLNNTIVTITDVRGRVVSWASAGTSGFKGPRRGTPYAAQAAAVNAIRTVVD 789
PKG+IHVQAS NNTIVT+TDVRGRV+SW+SAGT GFKG RRGTP+AAQ AA NAIR VVD
Sbjct: 26 PKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRGVVD 85
Query: 790 QGMQRAGVMIKGPGLGRDAALRAICRSGIRLSFVRDVTPMPHNGC 924
QGMQRA VMIKGPGLGRDAALRAI RSGI LSF+RDVTPMPHNGC
Sbjct: 86 QGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFIRDVTPMPHNGC 130
>ref|XP_003606056.1| 30S ribosomal protein S11 [Medicago truncatula]
gi|355507111|gb|AES88253.1| 30S ribosomal protein S11
[Medicago truncatula]
Length = 466
Score = 218 bits (555), Expect(2) = e-101
Identities = 107/134 (79%), Positives = 119/134 (88%)
Frame = +3
Query: 1029 REEVVGSTRTLQWRCVESRIDSNRLYYGRFILCPLMKGQADTMGIAMRRALLGEIEGTCI 1208
R++V S RTLQW+CVESR+DS RLYYGRFIL PL KGQADT+GIAMRR LLGEIEGTCI
Sbjct: 136 RQKVKVSARTLQWKCVESRVDSKRLYYGRFILSPLRKGQADTIGIAMRRILLGEIEGTCI 195
Query: 1209 TCAKFEKVPHEYSTIVGIEESVHEILLNLKEIVLRSNIHGVRDASIYVKGPKYVTAQDII 1388
T AK EK+PHEYSTIVGI+ES+HEIL+NLKEIVL+SN++G RDASI KGP YVTAQDII
Sbjct: 196 TRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLKSNLYGTRDASICFKGPGYVTAQDII 255
Query: 1389 SPPSVEIVDTTQHI 1430
PPSVEIVD TQHI
Sbjct: 256 LPPSVEIVDNTQHI 269
Score = 180 bits (456), Expect(2) = e-101
Identities = 86/105 (81%), Positives = 96/105 (91%)
Frame = +1
Query: 610 PKGIIHVQASLNNTIVTITDVRGRVVSWASAGTSGFKGPRRGTPYAAQAAAVNAIRTVVD 789
PKG+I+VQAS NNTIVT+TDVRGRV+SW+SAG+ GFKG RRGTP+AAQ AA NAIRTVVD
Sbjct: 26 PKGVIYVQASFNNTIVTVTDVRGRVISWSSAGSCGFKGTRRGTPFAAQTAAANAIRTVVD 85
Query: 790 QGMQRAGVMIKGPGLGRDAALRAICRSGIRLSFVRDVTPMPHNGC 924
QGMQRA V+IKGPGLGRDAALRAI RSGI L F+RDVTP+PHNGC
Sbjct: 86 QGMQRAVVIIKGPGLGRDAALRAIARSGILLRFIRDVTPIPHNGC 130
>ref|YP_007475736.1| RNA polymerase alpha subunit [Zingiber spectabile]
gi|449326215|gb|AGE92800.1| RNA polymerase alpha subunit
[Zingiber spectabile]
Length = 339
Score = 268 bits (684), Expect = 5e-69
Identities = 134/136 (98%), Positives = 134/136 (98%)
Frame = +3
Query: 1023 MVREEVVGSTRTLQWRCVESRIDSNRLYYGRFILCPLMKGQADTMGIAMRRALLGEIEGT 1202
MVREEVVGSTRTLQWRCVESRIDSNRLYYGRFILCPLMKGQADTMGIAMRRALLGEIEGT
Sbjct: 1 MVREEVVGSTRTLQWRCVESRIDSNRLYYGRFILCPLMKGQADTMGIAMRRALLGEIEGT 60
Query: 1203 CITCAKFEKVPHEYSTIVGIEESVHEILLNLKEIVLRSNIHGVRDASIYVKGPKYVTAQD 1382
CITCAK EKV HEYSTIVGIEESVHEILLNLKEIVLRSNIHGVRDASIYVKGPKYVTAQD
Sbjct: 61 CITCAKSEKVSHEYSTIVGIEESVHEILLNLKEIVLRSNIHGVRDASIYVKGPKYVTAQD 120
Query: 1383 IISPPSVEIVDTTQHI 1430
IISPPSVEIVDTTQHI
Sbjct: 121 IISPPSVEIVDTTQHI 136
>gb|AGE93401.1| RNA polymerase alpha subunit [Alpinia zerumbet]
Length = 342
Score = 265 bits (678), Expect = 3e-68
Identities = 132/136 (97%), Positives = 134/136 (98%)
Frame = +3
Query: 1023 MVREEVVGSTRTLQWRCVESRIDSNRLYYGRFILCPLMKGQADTMGIAMRRALLGEIEGT 1202
MVREEVVGSTRTLQWRCVESRIDSNRLYYGRFILCPLMKGQADT+GIAMRRALLGEIEGT
Sbjct: 1 MVREEVVGSTRTLQWRCVESRIDSNRLYYGRFILCPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 1203 CITCAKFEKVPHEYSTIVGIEESVHEILLNLKEIVLRSNIHGVRDASIYVKGPKYVTAQD 1382
CITCAK EKVPHEYSTI+GIEESVHEILLNLKEIVLRSNIHGVRDASI VKGPKYVTAQD
Sbjct: 61 CITCAKSEKVPHEYSTIIGIEESVHEILLNLKEIVLRSNIHGVRDASICVKGPKYVTAQD 120
Query: 1383 IISPPSVEIVDTTQHI 1430
IISPPSVEIVDTTQHI
Sbjct: 121 IISPPSVEIVDTTQHI 136
>ref|YP_008854626.1| RNA polymerase alpha subunit [Curcuma roscoeana]
gi|557637533|gb|AHA13128.1| RNA polymerase alpha subunit
[Curcuma roscoeana]
Length = 343
Score = 265 bits (677), Expect = 4e-68
Identities = 133/136 (97%), Positives = 133/136 (97%)
Frame = +3
Query: 1023 MVREEVVGSTRTLQWRCVESRIDSNRLYYGRFILCPLMKGQADTMGIAMRRALLGEIEGT 1202
MVREEVVGSTRTLQWRCVESRIDSNRLYYGRFILCPLMKGQAD MGIAMRRALLGEIEGT
Sbjct: 1 MVREEVVGSTRTLQWRCVESRIDSNRLYYGRFILCPLMKGQADIMGIAMRRALLGEIEGT 60
Query: 1203 CITCAKFEKVPHEYSTIVGIEESVHEILLNLKEIVLRSNIHGVRDASIYVKGPKYVTAQD 1382
CITCAK EKVPHEYSTIVGIEESVHEILLNLKEIVLRSNIHGVRDASI VKGPKYVTAQD
Sbjct: 61 CITCAKSEKVPHEYSTIVGIEESVHEILLNLKEIVLRSNIHGVRDASICVKGPKYVTAQD 120
Query: 1383 IISPPSVEIVDTTQHI 1430
IISPPSVEIVDTTQHI
Sbjct: 121 IISPPSVEIVDTTQHI 136
>gb|AHA12787.1| RNA polymerase alpha subunit [Canna indica]
Length = 339
Score = 249 bits (637), Expect = 2e-63
Identities = 126/136 (92%), Positives = 130/136 (95%)
Frame = +3
Query: 1023 MVREEVVGSTRTLQWRCVESRIDSNRLYYGRFILCPLMKGQADTMGIAMRRALLGEIEGT 1202
MVREEV GSTRTLQWRCVESR+DS RLYYGRFIL PLMKGQADT+GIAMRRALLGEIEGT
Sbjct: 1 MVREEVAGSTRTLQWRCVESRVDSKRLYYGRFILSPLMKGQADTVGIAMRRALLGEIEGT 60
Query: 1203 CITCAKFEKVPHEYSTIVGIEESVHEILLNLKEIVLRSNIHGVRDASIYVKGPKYVTAQD 1382
CIT AK EKVPHEYSTIVGIEESVHEILLNLKEIVLRSNI+GVRDASI V+GPKYVTAQD
Sbjct: 61 CITRAKSEKVPHEYSTIVGIEESVHEILLNLKEIVLRSNIYGVRDASICVRGPKYVTAQD 120
Query: 1383 IISPPSVEIVDTTQHI 1430
IISPPSVEIVDTTQHI
Sbjct: 121 IISPPSVEIVDTTQHI 136
>ref|YP_007475651.1| RNA polymerase alpha subunit [Heliconia collinsiana]
gi|449326129|gb|AGE92715.1| RNA polymerase alpha subunit
[Heliconia collinsiana]
Length = 339
Score = 249 bits (637), Expect = 2e-63
Identities = 126/136 (92%), Positives = 130/136 (95%)
Frame = +3
Query: 1023 MVREEVVGSTRTLQWRCVESRIDSNRLYYGRFILCPLMKGQADTMGIAMRRALLGEIEGT 1202
MVREEV GSTRTLQWRCVESR+DS RLYYGRFIL PLMKGQADT+GIAMRRALLGEIEGT
Sbjct: 1 MVREEVAGSTRTLQWRCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 1203 CITCAKFEKVPHEYSTIVGIEESVHEILLNLKEIVLRSNIHGVRDASIYVKGPKYVTAQD 1382
CIT AK EKVPHEYSTIVGIEESVHEILLNLKEIVLRSNI+GVRDASI V+GPKYVTAQD
Sbjct: 61 CITRAKSEKVPHEYSTIVGIEESVHEILLNLKEIVLRSNIYGVRDASICVRGPKYVTAQD 120
Query: 1383 IISPPSVEIVDTTQHI 1430
IISPPSVEIVDTTQHI
Sbjct: 121 IISPPSVEIVDTTQHI 136
>gb|AEZ49460.1| RNA polymerase alpha subunit, partial [Pitcairnia feliciana]
Length = 337
Score = 248 bits (634), Expect = 3e-63
Identities = 123/136 (90%), Positives = 131/136 (96%)
Frame = +3
Query: 1023 MVREEVVGSTRTLQWRCVESRIDSNRLYYGRFILCPLMKGQADTMGIAMRRALLGEIEGT 1202
MVREEV GSTRTLQW+CVESR+DS RLYYGRFIL PLMKGQADT+GIAMRRALLGEIEGT
Sbjct: 1 MVREEVAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 1203 CITCAKFEKVPHEYSTIVGIEESVHEILLNLKEIVLRSNIHGVRDASIYVKGPKYVTAQD 1382
CIT AK EKVPHEYSTIVGIEESVHEILLNLKEIVLRSN++GVRDASI+V+GP+YVTAQD
Sbjct: 61 CITRAKSEKVPHEYSTIVGIEESVHEILLNLKEIVLRSNLYGVRDASIFVRGPRYVTAQD 120
Query: 1383 IISPPSVEIVDTTQHI 1430
IISPPSVEIVDTTQHI
Sbjct: 121 IISPPSVEIVDTTQHI 136
>gb|AHA12956.1| RNA polymerase alpha subunit [Monocostus uniflorus]
Length = 341
Score = 246 bits (629), Expect = 1e-62
Identities = 124/136 (91%), Positives = 129/136 (94%)
Frame = +3
Query: 1023 MVREEVVGSTRTLQWRCVESRIDSNRLYYGRFILCPLMKGQADTMGIAMRRALLGEIEGT 1202
MVREEV STRTLQWRCVESR+DS RLYYGRFIL PLMKGQADT+GIAMRRALLGE+EGT
Sbjct: 1 MVREEVARSTRTLQWRCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEMEGT 60
Query: 1203 CITCAKFEKVPHEYSTIVGIEESVHEILLNLKEIVLRSNIHGVRDASIYVKGPKYVTAQD 1382
CITCAK EKVPHEYSTIVGIEESVHEILLNLKEIVLRSNI+GVRDASI V+GPKYVTAQD
Sbjct: 61 CITCAKSEKVPHEYSTIVGIEESVHEILLNLKEIVLRSNIYGVRDASICVRGPKYVTAQD 120
Query: 1383 IISPPSVEIVDTTQHI 1430
IISP SVEIVDTTQHI
Sbjct: 121 IISPRSVEIVDTTQHI 136
>ref|YP_008854542.1| RNA polymerase alpha subunit [Ravenala madagascariensis]
gi|557637030|gb|AHA12631.1| RNA polymerase alpha subunit
[Ravenala madagascariensis]
Length = 340
Score = 246 bits (627), Expect = 2e-62
Identities = 124/136 (91%), Positives = 129/136 (94%)
Frame = +3
Query: 1023 MVREEVVGSTRTLQWRCVESRIDSNRLYYGRFILCPLMKGQADTMGIAMRRALLGEIEGT 1202
MVREE+ GSTRTLQWRCVESR+DS RLYYGRFIL PLMKGQADT+GIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWRCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 1203 CITCAKFEKVPHEYSTIVGIEESVHEILLNLKEIVLRSNIHGVRDASIYVKGPKYVTAQD 1382
CIT AK EKVPHEYSTIVGIEESVHEILLNLKEIVLRSNI+GVRDASI V+GPK VTAQD
Sbjct: 61 CITRAKSEKVPHEYSTIVGIEESVHEILLNLKEIVLRSNIYGVRDASICVRGPKCVTAQD 120
Query: 1383 IISPPSVEIVDTTQHI 1430
IISPPSVEIVDTTQHI
Sbjct: 121 IISPPSVEIVDTTQHI 136
>ref|YP_008854457.1| RNA polymerase alpha subunit [Musa textilis]
gi|557636944|gb|AHA12546.1| RNA polymerase alpha subunit
[Musa textilis]
Length = 337
Score = 245 bits (626), Expect = 3e-62
Identities = 122/136 (89%), Positives = 128/136 (94%)
Frame = +3
Query: 1023 MVREEVVGSTRTLQWRCVESRIDSNRLYYGRFILCPLMKGQADTMGIAMRRALLGEIEGT 1202
MVREEV GSTRTLQWRCVESR+DS RLYYGRF+L PLMKGQADT+GIAMRRALLGEIEGT
Sbjct: 1 MVREEVAGSTRTLQWRCVESRVDSKRLYYGRFVLSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 1203 CITCAKFEKVPHEYSTIVGIEESVHEILLNLKEIVLRSNIHGVRDASIYVKGPKYVTAQD 1382
CIT A EKVPHEYSTI+GIEESVHEILLNLKEIVLRSNI+GVRDASI +GPKYVTAQD
Sbjct: 61 CITRANSEKVPHEYSTIIGIEESVHEILLNLKEIVLRSNIYGVRDASICARGPKYVTAQD 120
Query: 1383 IISPPSVEIVDTTQHI 1430
IISPPSVEIVDTTQHI
Sbjct: 121 IISPPSVEIVDTTQHI 136
>gb|AEX94399.1| RNA polymerase alpha subunit (chloroplast) [Iris tenax]
Length = 339
Score = 245 bits (626), Expect = 3e-62
Identities = 121/136 (88%), Positives = 130/136 (95%)
Frame = +3
Query: 1023 MVREEVVGSTRTLQWRCVESRIDSNRLYYGRFILCPLMKGQADTMGIAMRRALLGEIEGT 1202
MVREEV GSTRTLQW+CVESR+DS RLYYGRFIL PL KGQADT+GIAMRRALLGEIEGT
Sbjct: 1 MVREEVTGSTRTLQWKCVESRVDSKRLYYGRFILSPLRKGQADTIGIAMRRALLGEIEGT 60
Query: 1203 CITCAKFEKVPHEYSTIVGIEESVHEILLNLKEIVLRSNIHGVRDASIYVKGPKYVTAQD 1382
CIT AK EKVPHEYSTIVGIEESVHEIL+NLKEIVLRSN++GVRDASI+V+GP+YVTAQD
Sbjct: 61 CITRAKSEKVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASIFVRGPRYVTAQD 120
Query: 1383 IISPPSVEIVDTTQHI 1430
IISPPSVEIVDTTQHI
Sbjct: 121 IISPPSVEIVDTTQHI 136
>gb|ABU85470.1| RNA polymerase alpha subunit [Musa acuminata]
gi|525312490|emb|CCW72408.1| rpoA (chloroplast) [Musa
acuminata subsp. malaccensis]
Length = 339
Score = 245 bits (626), Expect = 3e-62
Identities = 122/136 (89%), Positives = 128/136 (94%)
Frame = +3
Query: 1023 MVREEVVGSTRTLQWRCVESRIDSNRLYYGRFILCPLMKGQADTMGIAMRRALLGEIEGT 1202
MVREEV GSTRTLQWRCVESR+DS RLYYGRF+L PLMKGQADT+GIAMRRALLGEIEGT
Sbjct: 1 MVREEVAGSTRTLQWRCVESRVDSKRLYYGRFVLSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 1203 CITCAKFEKVPHEYSTIVGIEESVHEILLNLKEIVLRSNIHGVRDASIYVKGPKYVTAQD 1382
CIT A EKVPHEYSTI+GIEESVHEILLNLKEIVLRSNI+GVRDASI +GPKYVTAQD
Sbjct: 61 CITRANSEKVPHEYSTIIGIEESVHEILLNLKEIVLRSNIYGVRDASICARGPKYVTAQD 120
Query: 1383 IISPPSVEIVDTTQHI 1430
IISPPSVEIVDTTQHI
Sbjct: 121 IISPPSVEIVDTTQHI 136
>gb|AHH24305.1| RNA polymerase subunit A (chloroplast) [Japonolirion osense]
Length = 339
Score = 244 bits (623), Expect = 7e-62
Identities = 121/136 (88%), Positives = 130/136 (95%)
Frame = +3
Query: 1023 MVREEVVGSTRTLQWRCVESRIDSNRLYYGRFILCPLMKGQADTMGIAMRRALLGEIEGT 1202
MVREEVVGSTRTLQW+CVESR+DS RLYYGRFILCPLMKGQADT+GIAMRRALLGEIEGT
Sbjct: 1 MVREEVVGSTRTLQWKCVESRVDSKRLYYGRFILCPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 1203 CITCAKFEKVPHEYSTIVGIEESVHEILLNLKEIVLRSNIHGVRDASIYVKGPKYVTAQD 1382
CIT AK EKVPHEYSTIVGIEESVHEI +NLKEIVLRSN++GVR+ASI V+GP+ VTAQD
Sbjct: 61 CITRAKSEKVPHEYSTIVGIEESVHEIFINLKEIVLRSNLYGVRNASICVRGPRSVTAQD 120
Query: 1383 IISPPSVEIVDTTQHI 1430
IISPPSVEIVDTTQHI
Sbjct: 121 IISPPSVEIVDTTQHI 136
>gb|AEZ49453.1| RNA polymerase alpha subunit [Lomandra longifolia]
Length = 342
Score = 244 bits (623), Expect = 7e-62
Identities = 119/136 (87%), Positives = 130/136 (95%)
Frame = +3
Query: 1023 MVREEVVGSTRTLQWRCVESRIDSNRLYYGRFILCPLMKGQADTMGIAMRRALLGEIEGT 1202
MVREE+ GSTRTLQW+CVESR+DS RLYYGRFIL PLMKGQADT+GIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 1203 CITCAKFEKVPHEYSTIVGIEESVHEILLNLKEIVLRSNIHGVRDASIYVKGPKYVTAQD 1382
CIT AK E+VPHEYSTIVGIEES+HEIL+NLKEIVLRSN++GVRDASI VKGPKY+TAQD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESIHEILINLKEIVLRSNLYGVRDASICVKGPKYITAQD 120
Query: 1383 IISPPSVEIVDTTQHI 1430
IISPPSV+IVDTTQHI
Sbjct: 121 IISPPSVKIVDTTQHI 136
>gb|AEZ49449.1| RNA polymerase alpha subunit, partial [Iris virginica]
Length = 337
Score = 244 bits (623), Expect = 7e-62
Identities = 120/136 (88%), Positives = 130/136 (95%)
Frame = +3
Query: 1023 MVREEVVGSTRTLQWRCVESRIDSNRLYYGRFILCPLMKGQADTMGIAMRRALLGEIEGT 1202
MVREEV GSTRTLQW+CVESR+DS RLYYGRFIL PL KGQADT+GIAMRRALLGEIEGT
Sbjct: 1 MVREEVTGSTRTLQWKCVESRVDSKRLYYGRFILSPLRKGQADTIGIAMRRALLGEIEGT 60
Query: 1203 CITCAKFEKVPHEYSTIVGIEESVHEILLNLKEIVLRSNIHGVRDASIYVKGPKYVTAQD 1382
CIT AK E+VPHEYSTIVGIEESVHEIL+NLKEIVLRSN++GVRDASI+V+GP+YVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASIFVRGPRYVTAQD 120
Query: 1383 IISPPSVEIVDTTQHI 1430
IISPPSVEIVDTTQHI
Sbjct: 121 IISPPSVEIVDTTQHI 136
>gb|AEX94409.1| RNA polymerase alpha subunit (chloroplast) [Maianthemum stellatum]
Length = 339
Score = 244 bits (623), Expect = 7e-62
Identities = 120/136 (88%), Positives = 130/136 (95%)
Frame = +3
Query: 1023 MVREEVVGSTRTLQWRCVESRIDSNRLYYGRFILCPLMKGQADTMGIAMRRALLGEIEGT 1202
MVREE+ GSTRTLQW+CVESR+DS RLYYGRFIL PLMKGQADT+GIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 1203 CITCAKFEKVPHEYSTIVGIEESVHEILLNLKEIVLRSNIHGVRDASIYVKGPKYVTAQD 1382
CIT AK E+VPHEYSTIVGIEESVHEIL+NLKEIVLRSN++GVRDASI V+GP+YVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 1383 IISPPSVEIVDTTQHI 1430
IISPPSVEIVDTTQHI
Sbjct: 121 IISPPSVEIVDTTQHI 136
>gb|AEX94407.1| RNA polymerase alpha subunit (chloroplast) [Ruscus aculeatus]
Length = 339
Score = 244 bits (623), Expect = 7e-62
Identities = 120/136 (88%), Positives = 130/136 (95%)
Frame = +3
Query: 1023 MVREEVVGSTRTLQWRCVESRIDSNRLYYGRFILCPLMKGQADTMGIAMRRALLGEIEGT 1202
MVREE+ GSTRTLQW+CVESR+DS RLYYGRFIL PLMKGQADT+GIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 1203 CITCAKFEKVPHEYSTIVGIEESVHEILLNLKEIVLRSNIHGVRDASIYVKGPKYVTAQD 1382
CIT AK E+VPHEYSTIVGIEESVHEIL+NLKEIVLRSN++GVRDASI V+GP+YVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 1383 IISPPSVEIVDTTQHI 1430
IISPPSVEIVDTTQHI
Sbjct: 121 IISPPSVEIVDTTQHI 136
>gb|AEX94403.1| RNA polymerase alpha subunit (chloroplast) [Dasylirion wheeleri]
Length = 339
Score = 244 bits (623), Expect = 7e-62
Identities = 120/136 (88%), Positives = 130/136 (95%)
Frame = +3
Query: 1023 MVREEVVGSTRTLQWRCVESRIDSNRLYYGRFILCPLMKGQADTMGIAMRRALLGEIEGT 1202
MVREE+ GSTRTLQW+CVESR+DS RLYYGRFIL PLMKGQADT+GIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 1203 CITCAKFEKVPHEYSTIVGIEESVHEILLNLKEIVLRSNIHGVRDASIYVKGPKYVTAQD 1382
CIT AK E+VPHEYSTIVGIEESVHEIL+NLKEIVLRSN++GVRDASI V+GP+YVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 1383 IISPPSVEIVDTTQHI 1430
IISPPSVEIVDTTQHI
Sbjct: 121 IISPPSVEIVDTTQHI 136
>gb|AEX94402.1| RNA polymerase alpha subunit (chloroplast) [Calibanus hookeri]
Length = 339
Score = 244 bits (623), Expect = 7e-62
Identities = 120/136 (88%), Positives = 130/136 (95%)
Frame = +3
Query: 1023 MVREEVVGSTRTLQWRCVESRIDSNRLYYGRFILCPLMKGQADTMGIAMRRALLGEIEGT 1202
MVREE+ GSTRTLQW+CVESR+DS RLYYGRFIL PLMKGQADT+GIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 1203 CITCAKFEKVPHEYSTIVGIEESVHEILLNLKEIVLRSNIHGVRDASIYVKGPKYVTAQD 1382
CIT AK E+VPHEYSTIVGIEESVHEIL+NLKEIVLRSN++GVRDASI V+GP+YVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 1383 IISPPSVEIVDTTQHI 1430
IISPPSVEIVDTTQHI
Sbjct: 121 IISPPSVEIVDTTQHI 136