BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00019035
         (1459 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s...   230   1e-57
emb|CBI17549.3| unnamed protein product [Vitis vinifera]              230   1e-57
ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III s...   218   4e-54
ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   218   7e-54
gb|EAZ42119.1| hypothetical protein OsJ_26678 [Oryza sativa Japo...   199   2e-48
gb|EAZ06297.1| hypothetical protein OsI_28532 [Oryza sativa Indi...   199   2e-48
gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theo...   199   3e-48
ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Popu...   197   1e-47
ref|XP_004973130.1| PREDICTED: uncharacterized protein LOC101766...   196   2e-47
ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citr...   196   2e-47
ref|XP_006659992.1| PREDICTED: DNA-directed RNA polymerase III s...   194   6e-47
ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III s...   192   2e-46
dbj|BAJ95336.1| predicted protein [Hordeum vulgare subsp. vulgar...   191   5e-46
ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III s...   191   7e-46
ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III s...   191   7e-46
dbj|BAK01665.1| predicted protein [Hordeum vulgare subsp. vulgare]    190   1e-45
gb|EOX91150.1| Transcription regulators,zinc ion binding, putati...   187   1e-44
gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]       185   4e-44
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin...   185   5e-44
ref|XP_003573633.1| PREDICTED: DNA-directed RNA polymerase III s...   184   1e-43

>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
            vinifera]
          Length = 672

 Score =  230 bits (587), Expect = 1e-57
 Identities = 149/385 (38%), Positives = 208/385 (54%), Gaps = 14/385 (3%)
 Frame = -3

Query: 1451 IPFMIKPSDYINSLYP-GTSTDDKRTQAFSLRHLLSLPLEKRLKKWFSEVCQVNNFNALL 1275
            I F++ P +Y+NSL P G S DD R++  S R LLS+PLE+R K    E   V+ F+AL 
Sbjct: 287  IQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEGPPVHRFSALK 346

Query: 1274 DLAPDSSKEDVLKVLPHYADLVQGLWVTKSSLLH---EGEAALYRDYLLYLFSMNPIIQT 1104
              APD+S EDVL VL  +A LVQGLWV KSSLL    +G A L RDY+L LFS  P+I  
Sbjct: 347  HFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPLARDYILLLFSKGPLINY 406

Query: 1103 DRLRMLTSKCTGLKSILIPLAVERRILKHWKFIKSTDMVFIRNNPKIVDDQEKAWLACWN 924
             ++ +  S    LK  L  LAVER   + WKF + TD+ F++ +P IV +Q + W +   
Sbjct: 407  SQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLHPDIVREQRRVWESLEK 466

Query: 923  NIKKSV---GEKMHVPVPSGKRVKIADDVHESKDKAVNTAV-------SSLSSETQEHLL 774
             I   +   G +  V   SGK          +K      A        +++S+ET+E L 
Sbjct: 467  QITDIIHGGGRRGPVTKNSGKPSIANKTGTSTKSDGATRATNGTPVRRTAMSAETREALP 526

Query: 773  KILQKFFKDKKIRSINSVVNELRGLAISNSSRPREDPKXXXXXXXXXXXXXXXXSELQSI 594
            K L++ F+  K+ S   +   LR LA+S S+ P+ DP+                 EL +I
Sbjct: 527  KALEEVFRLHKVCSFQLICQALRDLAVSKSTSPKVDPR---TFVAAAYGADAPQEELHAI 583

Query: 593  VSQIAVDVHGTYVLKSTGSSXXXXXXXXXXXLFRGKEPKAKLNKQEVRMAAKARLQKDIN 414
            +S+ A  VHG YV K++  S           LF GKEP AKL + ++  AAK  L+K+I 
Sbjct: 584  ISKYATTVHGVYVWKTSEHSEHNPLRKVVVDLFCGKEPNAKLKRADIMEAAKIALKKEIT 643

Query: 413  DSDYNQVMRDLCDSNKGSWALKSGD 339
              +YN+V+ +LC+S    W LKSGD
Sbjct: 644  THEYNKVVSELCESRGSLWVLKSGD 668


>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  230 bits (587), Expect = 1e-57
 Identities = 149/385 (38%), Positives = 208/385 (54%), Gaps = 14/385 (3%)
 Frame = -3

Query: 1451 IPFMIKPSDYINSLYP-GTSTDDKRTQAFSLRHLLSLPLEKRLKKWFSEVCQVNNFNALL 1275
            I F++ P +Y+NSL P G S DD R++  S R LLS+PLE+R K    E   V+ F+AL 
Sbjct: 303  IQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEGPPVHRFSALK 362

Query: 1274 DLAPDSSKEDVLKVLPHYADLVQGLWVTKSSLLH---EGEAALYRDYLLYLFSMNPIIQT 1104
              APD+S EDVL VL  +A LVQGLWV KSSLL    +G A L RDY+L LFS  P+I  
Sbjct: 363  HFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPLARDYILLLFSKGPLINY 422

Query: 1103 DRLRMLTSKCTGLKSILIPLAVERRILKHWKFIKSTDMVFIRNNPKIVDDQEKAWLACWN 924
             ++ +  S    LK  L  LAVER   + WKF + TD+ F++ +P IV +Q + W +   
Sbjct: 423  SQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLHPDIVREQRRVWESLEK 482

Query: 923  NIKKSV---GEKMHVPVPSGKRVKIADDVHESKDKAVNTAV-------SSLSSETQEHLL 774
             I   +   G +  V   SGK          +K      A        +++S+ET+E L 
Sbjct: 483  QITDIIHGGGRRGPVTKNSGKPSIANKTGTSTKSDGATRATNGTPVRRTAMSAETREALP 542

Query: 773  KILQKFFKDKKIRSINSVVNELRGLAISNSSRPREDPKXXXXXXXXXXXXXXXXSELQSI 594
            K L++ F+  K+ S   +   LR LA+S S+ P+ DP+                 EL +I
Sbjct: 543  KALEEVFRLHKVCSFQLICQALRDLAVSKSTSPKVDPR---TFVAAAYGADAPQEELHAI 599

Query: 593  VSQIAVDVHGTYVLKSTGSSXXXXXXXXXXXLFRGKEPKAKLNKQEVRMAAKARLQKDIN 414
            +S+ A  VHG YV K++  S           LF GKEP AKL + ++  AAK  L+K+I 
Sbjct: 600  ISKYATTVHGVYVWKTSEHSEHNPLRKVVVDLFCGKEPNAKLKRADIMEAAKIALKKEIT 659

Query: 413  DSDYNQVMRDLCDSNKGSWALKSGD 339
              +YN+V+ +LC+S    W LKSGD
Sbjct: 660  THEYNKVVSELCESRGSLWVLKSGD 684


>ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Cucumis
            sativus]
          Length = 702

 Score =  218 bits (556), Expect = 4e-54
 Identities = 137/386 (35%), Positives = 203/386 (52%), Gaps = 17/386 (4%)
 Frame = -3

Query: 1445 FMIKPSDYINSLYPGTSTDDKRTQAFSLRHLLSLPLEKRLKKWFSEVCQVNNFNALLDLA 1266
            F + P DY++SL PGTST   + +  S ++LLSL LE+R+KK  +E   V  F+AL   A
Sbjct: 320  FSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLSLEERIKKLLTEGPPVQRFSALKHYA 379

Query: 1265 PDSSKEDVLKVLPHYADLVQGLWVTKSSLL--HEGEAALYRDYLLYLFSMNPIIQTDRLR 1092
            PD   E+ ++ L  YA LVQGLWV KS  L   +G     RD++L+LFS NP++ + ++ 
Sbjct: 380  PDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQDGSGRCARDFVLFLFSKNPVVSSSQIN 439

Query: 1091 MLTSKCTGLKSILIPLAVERRILKHWKFIKSTDMVFIRNNPKIVDDQEKAWLACWNNIKK 912
            +  S    +K  L    VER   K WKF + TD +F+ N+ +I + QE+     WNN++K
Sbjct: 440  VPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDRLFLSNHVRIAEKQEE----LWNNVEK 495

Query: 911  ------SVGEKMHVPVPSGK--------RVKIADDVHESKDKAVNTAVSSLSSETQEHLL 774
                  S+    H    +GK        +   +D        A      ++S ET+E L 
Sbjct: 496  GFTFLRSIKSVHHANAATGKPGVVPKLEKQVSSDQTTTKSSNAPLNRKGAMSDETREALP 555

Query: 773  KILQKFFKDKKIRSINSVVNELRGLAISNSSRPREDPKXXXXXXXXXXXXXXXXSELQSI 594
            K LQK F++ K+ S   +   LR LA+S S+ P+ D +                 EL+ I
Sbjct: 556  KALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADAR---MAVAAAYGVDAPPDELKKI 612

Query: 593  VSQIAVDVHGTYVLKSTGS-SXXXXXXXXXXXLFRGKEPKAKLNKQEVRMAAKARLQKDI 417
            +SQ+A ++HG YVL S+               L RG+ PKA L K +V  A+K  L + I
Sbjct: 613  ISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADVLEASKHELGRAI 672

Query: 416  NDSDYNQVMRDLCDSNKGSWALKSGD 339
            N ++Y++VM ++C S+  SW LKSGD
Sbjct: 673  NSNEYSKVMNEICISHGSSWTLKSGD 698


>ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
            subunit RPC5-like [Cucumis sativus]
          Length = 702

 Score =  218 bits (554), Expect = 7e-54
 Identities = 137/386 (35%), Positives = 202/386 (52%), Gaps = 17/386 (4%)
 Frame = -3

Query: 1445 FMIKPSDYINSLYPGTSTDDKRTQAFSLRHLLSLPLEKRLKKWFSEVCQVNNFNALLDLA 1266
            F + P DY++SL PGTST   + +  S ++LLSL LE+R+KK  +E   V  F+AL   A
Sbjct: 320  FSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLSLEERIKKLLTEGPPVQRFSALKHYA 379

Query: 1265 PDSSKEDVLKVLPHYADLVQGLWVTKSSLL--HEGEAALYRDYLLYLFSMNPIIQTDRLR 1092
            PD   E+ ++ L  YA LVQGLWV KS  L   +G     RD++L+LFS NP++ + ++ 
Sbjct: 380  PDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQDGSGRCARDFVLFLFSKNPVVSSSQIN 439

Query: 1091 MLTSKCTGLKSILIPLAVERRILKHWKFIKSTDMVFIRNNPKIVDDQEKAWLACWNNIKK 912
            +  S    +K  L    VER   K WKF + TD +F+ N+ +I + QE+     WNN++K
Sbjct: 440  VPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDRLFLSNHVRIAEKQEE----LWNNVEK 495

Query: 911  ------SVGEKMHVPVPSGK--------RVKIADDVHESKDKAVNTAVSSLSSETQEHLL 774
                  S+    H    +GK        +   +D        A      ++S ET+E L 
Sbjct: 496  GFTFLRSIKSVHHANAATGKPGVVPKLEKQVSSDQTTTKSSNAPLNRKGAMSDETREALP 555

Query: 773  KILQKFFKDKKIRSINSVVNELRGLAISNSSRPREDPKXXXXXXXXXXXXXXXXSELQSI 594
            K LQK F++ K+ S   +   LR LA+S S+ P+ D +                 EL  I
Sbjct: 556  KALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADAR---MAVAAAYGVDAPPDELXKI 612

Query: 593  VSQIAVDVHGTYVLKSTGS-SXXXXXXXXXXXLFRGKEPKAKLNKQEVRMAAKARLQKDI 417
            +SQ+A ++HG YVL S+               L RG+ PKA L K +V  A+K  L + I
Sbjct: 613  ISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADVLEASKHELGRAI 672

Query: 416  NDSDYNQVMRDLCDSNKGSWALKSGD 339
            N ++Y++VM ++C S+  SW LKSGD
Sbjct: 673  NSNEYSKVMNEICISHGSSWTLKSGD 698


>gb|EAZ42119.1| hypothetical protein OsJ_26678 [Oryza sativa Japonica Group]
          Length = 673

 Score =  199 bits (506), Expect = 2e-48
 Identities = 129/360 (35%), Positives = 186/360 (51%), Gaps = 4/360 (1%)
 Frame = -3

Query: 1451 IPFMIKPSDYINSLYPGTSTDDK-RTQAFSLRHLLSLPLEKRLKKWFSEVCQVNNFNALL 1275
            I F +  SDY+ SL PG ST+ + + ++ ++R +L LPLE+RLKKWF+EV QVN F+AL+
Sbjct: 305  IDFTMSTSDYVMSLCPGGSTNSRDKNKSHAIREMLKLPLEERLKKWFTEVSQVNRFDALM 364

Query: 1274 DLAPDSSKEDVLKVLPHYADLVQGLWVTKSSLLHEGEAALYRDYLLYLFSMN---PIIQT 1104
             LAP  S++DVLKVLP YADLV+GLWV KSSLL +   A  RD +L  F      P+   
Sbjct: 365  HLAPLYSEDDVLKVLPVYADLVRGLWVCKSSLLFDDGYAWKRDRILLEFRKKDSIPLKDI 424

Query: 1103 DRLRMLTSKCTGLKSILIPLAVERRILKHWKFIKSTDMVFIRNNPKIVDDQEKAWLACWN 924
             R+  +       K  L PL   R  L+  KF+   D  FIR  P IV +Q+ AW     
Sbjct: 425  HRIIKVKLDDNLKKKFLYPLCKIRAKLEDCKFVLPVDSSFIRRYPHIVKEQDHAWSVRET 484

Query: 923  NIKKSVGEKMHVPVPSGKRVKIADDVHESKDKAVNTAVSSLSSETQEHLLKILQKFFKDK 744
             +++S     +      K    ++   +  D  +N A        +  +  +L   F   
Sbjct: 485  TMRESQETSSNTEARKTKNTTKSNIPSKGPDPNMNKARDGPVQGNENLVHSVLDTIFTAN 544

Query: 743  KIRSINSVVNELRGLAISNSSRPREDPKXXXXXXXXXXXXXXXXSELQSIVSQIAVDVHG 564
            K+RSI ++  +LR LA   +S  ++ PK                 +LQ  ++Q+AV VHG
Sbjct: 545  KVRSIQAIRRDLRQLAAKYASDRKDGPKLQALSNAATNCASFPLVDLQKSLNQVAVPVHG 604

Query: 563  TYVLKSTGSSXXXXXXXXXXXLFRGKEPKAKLNKQEVRMAAKARLQKDINDSDYNQVMRD 384
             YV K    +           LFR K+P +KL KQE+   A   L+K +N+ DY+QV R+
Sbjct: 605  VYVAK---PAKPNSPRNILIKLFRDKDPDSKLTKQEILDCAANHLKKGLNEKDYHQVWRE 661


>gb|EAZ06297.1| hypothetical protein OsI_28532 [Oryza sativa Indica Group]
          Length = 673

 Score =  199 bits (506), Expect = 2e-48
 Identities = 129/360 (35%), Positives = 186/360 (51%), Gaps = 4/360 (1%)
 Frame = -3

Query: 1451 IPFMIKPSDYINSLYPGTSTDDK-RTQAFSLRHLLSLPLEKRLKKWFSEVCQVNNFNALL 1275
            I F +  SDY+ SL PG ST+ + + ++ ++R +L LPLE+RLKKWF+EV QVN F+AL+
Sbjct: 305  IDFTMSTSDYVMSLCPGGSTNSRDKNKSHAIREMLKLPLEERLKKWFTEVSQVNRFDALM 364

Query: 1274 DLAPDSSKEDVLKVLPHYADLVQGLWVTKSSLLHEGEAALYRDYLLYLFSMN---PIIQT 1104
             LAP  S++DVLKVLP YADLV+GLWV KSSLL +   A  RD +L  F      P+   
Sbjct: 365  HLAPLYSEDDVLKVLPVYADLVRGLWVCKSSLLFDDGYAWKRDRILLEFRKKDSIPLKDI 424

Query: 1103 DRLRMLTSKCTGLKSILIPLAVERRILKHWKFIKSTDMVFIRNNPKIVDDQEKAWLACWN 924
             R+  +       K  L PL   R  L+  KF+   D  FIR  P IV +Q+ AW     
Sbjct: 425  HRIIKVKLDDNLKKKFLYPLCKIRAKLEDCKFVLPVDSSFIRRYPHIVKEQDHAWSVRET 484

Query: 923  NIKKSVGEKMHVPVPSGKRVKIADDVHESKDKAVNTAVSSLSSETQEHLLKILQKFFKDK 744
             +++S     +      K    ++   +  D  +N A        +  +  +L   F   
Sbjct: 485  TMRESQETSSNTEARKTKNTTKSNIPSKGPDPNMNKARDGPVQGNENLVHSVLDTIFTAN 544

Query: 743  KIRSINSVVNELRGLAISNSSRPREDPKXXXXXXXXXXXXXXXXSELQSIVSQIAVDVHG 564
            K+RSI ++  +LR LA   +S  ++ PK                 +LQ  ++Q+AV VHG
Sbjct: 545  KVRSIQAIRRDLRQLAAKYASDRKDGPKLQALSNAATNCASFPLVDLQKSLNQVAVPVHG 604

Query: 563  TYVLKSTGSSXXXXXXXXXXXLFRGKEPKAKLNKQEVRMAAKARLQKDINDSDYNQVMRD 384
             YV K    +           LFR K+P +KL KQE+   A   L+K +N+ DY+QV R+
Sbjct: 605  VYVAK---PAKPNSPRNILIKLFRDKDPDSKLTKQEILDCAANHLKKGLNEKDYHQVWRE 661


>gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
          Length = 700

 Score =  199 bits (505), Expect = 3e-48
 Identities = 143/384 (37%), Positives = 208/384 (54%), Gaps = 12/384 (3%)
 Frame = -3

Query: 1454 QIPFMIKPSDYINSLYPGTSTDDKRTQAFSLRHLLSLPLEKRLKKWFSEVCQVNNFNALL 1275
            +I F + P DY++SL PG S ++K  Q  S R LLS+PLE+RLKK  SE    + F+AL 
Sbjct: 320  RIQFTMSPYDYVDSLCPGASNNNK-AQGPSRRLLLSIPLEERLKKLLSEGPPFHRFSALK 378

Query: 1274 DLAPDSSKEDVLKVLPHYADLVQGLWVTKSSLL--HEGEAALYRDYLLYLFSMNPIIQTD 1101
              APD+S ED+ +VL  +A LVQGLWV KSSLL   +   +L RDY+L LFS NPII   
Sbjct: 379  HFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDPYKSLARDYVLLLFSKNPIISLA 438

Query: 1100 RLRMLT-SKCTGLKSILIPLAVERRILKHWKFIKSTDMVFIRNNPKIVDDQEKAWLACWN 924
            ++  L+ S+   +K  L  LA+ER   K WK  ++ D  F +  P IV +QE+ W A  +
Sbjct: 439  QVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLYPDIVKNQEQIWRAGED 498

Query: 923  NIKKSV--GEKMHVPVPSGKRVKIADDVHESKDKAVN------TAVSSLSSETQEHLLKI 768
            N+   +  G K   P  +     I  +   + DK V        A  ++S ET+E + K 
Sbjct: 499  NVINHICRGAK-GGPSRTKPGTVIKPEKAMNSDKGVRRVAPAVQAGRTMSDETREAIPKA 557

Query: 767  LQKFFKDKKIRSINSVVNELRGLAISNSSRPREDPKXXXXXXXXXXXXXXXXSELQSIVS 588
            L+K F+  K+ S+  +   LR LA+S S+ P+ D +                 ELQ +VS
Sbjct: 558  LKKVFQTHKVCSLQLIRKGLRDLALSQSTLPKADAR---MVVKAAYGADAPEHELQEVVS 614

Query: 587  QIAVDVH-GTYVLKSTGSSXXXXXXXXXXXLFRGKEPKAKLNKQEVRMAAKARLQKDIND 411
            ++AV++H G +VL+S  S            +      K KL K +V  AA   L+++I++
Sbjct: 615  EVAVELHGGLFVLRS--SPEHPEYDPLREVVINLLRVKGKLKKADVSAAALLSLKREISN 672

Query: 410  SDYNQVMRDLCDSNKGSWALKSGD 339
            ++YN+VM D C+     W LKSGD
Sbjct: 673  NEYNKVMSDFCEYKSSWWVLKSGD 696


>ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Populus trichocarpa]
            gi|550334731|gb|EEE90658.2| hypothetical protein
            POPTR_0007s12540g [Populus trichocarpa]
          Length = 667

 Score =  197 bits (500), Expect = 1e-47
 Identities = 136/381 (35%), Positives = 193/381 (50%), Gaps = 10/381 (2%)
 Frame = -3

Query: 1451 IPFMIKPSDYINSLYPGTSTDDKRTQAFSLRHLLSLPLEKRLKKWFSEVCQVNNFNALLD 1272
            I F + P DY++SL PG S ++ +    S R LLSLPLE+R+K+ F E   ++ F AL  
Sbjct: 303  IEFAMNPYDYMSSLCPGISNNNIKLNGPSRRVLLSLPLEERIKRLFLEGPPIHRFAALRH 362

Query: 1271 LAPDSSKEDVLKVLPHYADLVQGLWVTKSSLLH------EGEAALYRDYLLYLFSMNPII 1110
            L P+ S ED+L VL  Y  LVQGLWV K+SLL       E      RDY+L LFS + ++
Sbjct: 363  LIPNDSIEDLLIVLQEYGQLVQGLWVPKTSLLFPNPKPTEKVKLAARDYILLLFSKSLVV 422

Query: 1109 QTDRLRMLTSKCTGLKSILIPLAVERRILKHWKFIKSTDMVFIRNNPKIVDDQEKAWLAC 930
                L  +  K   LKS L   AVER   K WKF ++ D +F+   P IV  QE+AW   
Sbjct: 423  TPSELN-VPMKPLILKSFLNIFAVERPSFKDWKFKENVDTLFVELYPDIVRKQEQAWEVM 481

Query: 929  WNNIKKSVGEKMHVPVPSGKRVKIADDVHESKDKAVNTAVSSLSSETQEHLLKILQKFFK 750
              NI  +          +GK V             +     +++ ET+E L K L K  +
Sbjct: 482  GKNISAAFDR-------AGKSV---------SKNVITKPKKTMTDETREALRKALPKVLQ 525

Query: 749  DKKI--RSINSVVNELRGLAISNSSRPREDPKXXXXXXXXXXXXXXXXSELQSIVSQIAV 576
              K+       +   LR LAIS S+ P+ DP+                 ELQ ++S++A 
Sbjct: 526  THKVCRYGFQMICQGLRQLAISQSTLPKADPR---IAVAAASGAEAPPEELQEVISEVAT 582

Query: 575  DVHGTYVLKSTGS--SXXXXXXXXXXXLFRGKEPKAKLNKQEVRMAAKARLQKDINDSDY 402
            ++HG YVLKS+                LF  + P A + K EV+ AA+  L+++ ++S+Y
Sbjct: 583  NIHGFYVLKSSPEHPDFDPLSRKVVIGLFLARGPNANIKKSEVQAAARLELKREPSNSEY 642

Query: 401  NQVMRDLCDSNKGSWALKSGD 339
             +VM DLC+S   +W LKSGD
Sbjct: 643  IKVMTDLCESKGSAWVLKSGD 663


>ref|XP_004973130.1| PREDICTED: uncharacterized protein LOC101766969 [Setaria italica]
          Length = 449

 Score =  196 bits (499), Expect = 2e-47
 Identities = 140/376 (37%), Positives = 202/376 (53%), Gaps = 5/376 (1%)
 Frame = -3

Query: 1451 IPFMIKPSDYINSLYPGTSTDDKR-TQAFSLRHLLSLPLEKRLKKWFSEVCQVNNFNALL 1275
            I F ++ SDY+ SL PG ST  +   +  ++R +L LPLE+RLKKWF+EV +VN F+AL 
Sbjct: 79   IDFTMRNSDYVMSLCPGASTSSRHINKCQAIREMLLLPLEERLKKWFTEVSEVNQFDALK 138

Query: 1274 DLAPDSSKEDVLKVLPHYADLVQGLWVTKSSLLHEGEAALYRDYLLYLFSMNPIIQTDRL 1095
             LAP  S+E++LKVLP YA LV+GLWV KSSLL +   A  RD +L  F+    I +D L
Sbjct: 139  HLAPTYSEEEILKVLPEYAYLVRGLWVCKSSLLFDDGYASKRDRVLLEFTKMESIPSDTL 198

Query: 1094 -RMLTSKCTGLKSILIPLAVERRILKHWKFIKSTDMVFIRNNPKIVDDQEKAWLACWNNI 918
               +       K IL PL   R ILK +KFI S D+ F++  P IV++QE AW A    +
Sbjct: 199  DAWIRLDDPKRKRILFPLCKRRGILKDYKFI-SADLSFLKRYPHIVNEQECAWSAREMIL 257

Query: 917  KKSVGEKMHVPVPSGKRVKIADDVHESKDKAVNTAV--SSLSSETQEHLLKILQKFFKDK 744
             +S   KM   VP   +     +V  SK    NT+      +  + + +  +L   F   
Sbjct: 258  HES--PKMCSTVPRKGKNSTRPNV-ASKGPHPNTSKGRDGPAQGSDDLVQSVLGTVFTAN 314

Query: 743  KIRSINSVVNELRGLAISNSSRPREDPKXXXXXXXXXXXXXXXXSELQSIVSQIAVDVHG 564
            K+RS+ +VV +LR LA   +S  ++  K                 +L+S +  +AVDVH 
Sbjct: 315  KVRSMQAVVRDLRQLAAKYASNRKDVSKFQALSDAAKYCASLPHDKLKSSILLVAVDVHD 374

Query: 563  TYVLKSTGSSXXXXXXXXXXXLFRGKEPKAKLNKQEVRMAAKARLQKDINDSDYNQVMRD 384
             +V K                LFR KEP A L KQE+  AA   +++++ D +Y+QV+ +
Sbjct: 375  VFVAKHENK---LALRNVLILLFRKKEPNATLTKQEILAAAAKIIKREVTDREYHQVVTE 431

Query: 383  LCDSNK-GSWALKSGD 339
            +C S + G   LK+GD
Sbjct: 432  ICISTEDGHLVLKNGD 447


>ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
            gi|568824759|ref|XP_006466762.1| PREDICTED: DNA-directed
            RNA polymerase III subunit RPC5-like [Citrus sinensis]
            gi|557527707|gb|ESR38957.1| hypothetical protein
            CICLE_v10025048mg [Citrus clementina]
          Length = 690

 Score =  196 bits (498), Expect = 2e-47
 Identities = 130/384 (33%), Positives = 200/384 (52%), Gaps = 16/384 (4%)
 Frame = -3

Query: 1451 IPFMIKPSDYINSLYPGTSTDDKRTQAFSLRHLLSLPLEKRLKKWFSEVCQVNNFNALLD 1272
            I F + P DY++SL PG  +++ +++  S R LLS+PLE+R KK   E   V  F+ L+ 
Sbjct: 310  IHFTMNPYDYVSSLCPGAGSNNTKSKGPSRRFLLSMPLEERFKKLLCEGEPVQRFSTLMH 369

Query: 1271 LAPDSSKEDVLKVLPHYADLVQGLWVTKSSLLHEGE--AALYRDYLLYLFSMNPIIQTDR 1098
             AP+ + EDV+ VL     LVQGLW  +S LL   +    L RDY+L  FS N +++   
Sbjct: 370  FAPNDTVEDVIGVLHKNGLLVQGLWAPRSPLLFNNDKMKCLARDYVLLSFSKNSVVKFQH 429

Query: 1097 LRMLTSKCTGLKSILIPLAVERRILKHWKFIKSTDMVFIRNNPKIVDDQEKAWLACWNNI 918
            L +       +K  L   AVER   K WKF + TD+ FI+ +P IV  QE+ W A     
Sbjct: 430  LSVSPKLRDHIKCFLNIFAVERPDFKDWKFRQQTDLSFIKEHPNIVIKQEQVWAAA---- 485

Query: 917  KKSVGEKMHVPVPSGKRVKIADDVHESKD-----KAVN---------TAVSSLSSETQEH 780
            +K + + ++    SG  ++  +D  +S       KA+N         T   +LS+E++E 
Sbjct: 486  EKQITDVINKLGKSGSTLR--NDAGKSAMVNKHLKAINSSNGPSGALTGNKNLSNESREA 543

Query: 779  LLKILQKFFKDKKIRSINSVVNELRGLAISNSSRPREDPKXXXXXXXXXXXXXXXXSELQ 600
            L K LQK F+  K+ S+  +   LR LAIS S+ P+ D +                 E  
Sbjct: 544  LPKALQKLFQIHKVCSLPLIKQGLRDLAISQSTLPKADARMTVLAAEIVDSSFVDTQEFA 603

Query: 599  SIVSQIAVDVHGTYVLKSTGSSXXXXXXXXXXXLFRGKEPKAKLNKQEVRMAAKARLQKD 420
             ++SQ+A ++HG YV KS+              L     P AKL K +V  AA+  L+++
Sbjct: 604  EVISQVATNIHGFYVSKSSEDPQHGPLRKVVTDLLLAGGPDAKLKKADVVEAARHVLKRE 663

Query: 419  INDSDYNQVMRDLCDSNKGSWALK 348
            I++++Y++VM D+C+S   +W LK
Sbjct: 664  ISNAEYSKVMSDICESKGSAWILK 687


>ref|XP_006659992.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Oryza
            brachyantha]
          Length = 682

 Score =  194 bits (494), Expect = 6e-47
 Identities = 134/376 (35%), Positives = 193/376 (51%), Gaps = 5/376 (1%)
 Frame = -3

Query: 1451 IPFMIKPSDYINSLYPGTSTDDKRT-QAFSLRHLLSLPLEKRLKKWFSEVCQVNNFNALL 1275
            I F +  SDY+ SL PG ST  K   ++ ++R +L LPLE+RLKKWF+EV QVN F+AL+
Sbjct: 312  IDFTMNTSDYLMSLCPGGSTGSKGVNRSHAIREMLKLPLEERLKKWFTEVSQVNQFDALM 371

Query: 1274 DLAPDSSKEDVLKVLPHYADLVQGLWVTKSSLLHEGEAALYRDYLLYLFSMN---PIIQT 1104
             LA   S++D+LKVLP YADLV GLWV KSSLL +   A  RD +L  F+     P+   
Sbjct: 372  HLAQTYSEDDLLKVLPVYADLVHGLWVCKSSLLFDDGYACKRDRILLEFTKKDSIPLKDV 431

Query: 1103 DRLRMLTSKCTGLKSILIPLAVERRILKHWKFIKSTDMVFIRNNPKIVDDQEKAWLACWN 924
            DRL  +  +    K +L PL   R  L+ +KFI   D  FI+  P IV +Q+ AW     
Sbjct: 432  DRLIRVDDE--RRKILLPPLCKRREKLQDYKFILPVDSSFIKRYPHIVKEQDHAWSVREI 489

Query: 923  NIKKSVGEKMHVPVPSGKRVKIADDVHESKDKAVNTAVSSLSSETQEHLLKILQKFFKDK 744
             ++ S     H      K    ++   +  D   + A        +  +  +L+  F   
Sbjct: 490  TMRDSQETSSHTEARKTKNSAKSNIPSKGPDPNTSKAKDGPVQGVENLVQSVLETIFTAN 549

Query: 743  KIRSINSVVNELRGLAISNSSRPREDPKXXXXXXXXXXXXXXXXSELQSIVSQIAVDVHG 564
            K+RSI ++  +LR LA   +S  ++  K                 ELQ  V Q+AV VHG
Sbjct: 550  KVRSIQAIRRDLRQLAAKYASDRKDGQKLQALSNAATSCAALPLVELQKSVEQVAVHVHG 609

Query: 563  TYVLKSTGSSXXXXXXXXXXXLFRGKEPKAKLNKQEVRMAAKARLQKDINDSDYNQVMRD 384
             YV K+               LF  K+P AKL KQE+ + +   L++DI + +Y+QV+ +
Sbjct: 610  VYVAKTPTKK---SLRHLILKLFHDKDPNAKLTKQEI-LDSAVILKRDI-EKEYHQVISE 664

Query: 383  LC-DSNKGSWALKSGD 339
            +C  +  G   LK+GD
Sbjct: 665  ICIQTEDGHLVLKNGD 680


>ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Solanum
            lycopersicum]
          Length = 669

 Score =  192 bits (489), Expect = 2e-46
 Identities = 130/390 (33%), Positives = 208/390 (53%), Gaps = 19/390 (4%)
 Frame = -3

Query: 1451 IPFMIKPSDYINSLYPGTSTDDKRTQAFSLRHLLSLPLEKRLKKWFSEVCQVNNFNALLD 1272
            +PF + P DY+N+  PG  TD  R +    R L  LPLE+R++ W  E   ++ F+AL+ 
Sbjct: 291  VPFSMSPVDYLNAFCPGRPTDTDRLKILRTR-LSQLPLEERVRIWLLEGPPIHRFDALMH 349

Query: 1271 LAPDSSKEDVLKVLPHYADLVQGLWVTKSSLLH---EGEAALYRDYLLYLFSMNPIIQTD 1101
            LAPD+S +++++VL  YA LVQGLWV KSSL++    G   L R+++LY F+   +I+  
Sbjct: 350  LAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLYEFTKGILIKKS 409

Query: 1100 ----RLRMLTSKCTGLKSILIPLAVERRILKHWKFIKSTDMVFIRNNPKIVDDQEKAWLA 933
                R   L +    LKS    LAVER  L  WK  +  D  F      +V +Q+  W  
Sbjct: 410  VFGRRPEFLKAATPALKS----LAVERPDLNDWKLKEHPDKKFENLYGDVVREQQATW-- 463

Query: 932  CWNNIKKSVGEKMHVPVPSGK-RVKIADDVHE--------SKDKAVNTAV--SSLSSETQ 786
                  + +G++++  +P G+ R  + + ++         S DK  ++++  +S+S E +
Sbjct: 464  ------ECLGKQINDVLPGGRTRPTMKNPINRNADITALPSGDKPTSSSLLRTSMSEEIR 517

Query: 785  EHLLKILQKFFKDKKIRSINSVVNELRGLAISNSSRPREDPKXXXXXXXXXXXXXXXXSE 606
            E L K LQ+ F+  K+ S   +   LR L +S S  P+  P+                 E
Sbjct: 518  EALPKALQEVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPR--KAITASVDVFDAPQEE 575

Query: 605  LQSIVSQIAVDVHGTYVLKST-GSSXXXXXXXXXXXLFRGKEPKAKLNKQEVRMAAKARL 429
            +Q++++Q+AV++HG YVLKS+  +            LF  + P AKL K  V  AAK +L
Sbjct: 576  IQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKIVIDLFMAEGPSAKLKKASVTEAAKLQL 635

Query: 428  QKDINDSDYNQVMRDLCDSNKGSWALKSGD 339
             +DI + ++ +VM++LC S K +W L+SGD
Sbjct: 636  NRDITNVEFLKVMKELCHSEKSAWVLRSGD 665


>dbj|BAJ95336.1| predicted protein [Hordeum vulgare subsp. vulgare]
            gi|326526307|dbj|BAJ97170.1| predicted protein [Hordeum
            vulgare subsp. vulgare]
          Length = 676

 Score =  191 bits (486), Expect = 5e-46
 Identities = 125/373 (33%), Positives = 189/373 (50%), Gaps = 2/373 (0%)
 Frame = -3

Query: 1451 IPFMIKPSDYINSLYPGTSTDDKR-TQAFSLRHLLSLPLEKRLKKWFSEVCQVNNFNALL 1275
            I F +   DY  SL PG  T  K   +  ++R +LSLPLE+RLKKWF+EV QV+ F AL+
Sbjct: 305  IDFTMSTQDYAASLCPGGPTGSKNINRCQAIREMLSLPLEERLKKWFTEVSQVSQFVALM 364

Query: 1274 DLAPDSSKEDVLKVLPHYADLVQGLWVTKSSLLHEGEAALYRDYLLYLFSMNPIIQTDRL 1095
             LAPD S+EDVL++LP YADLV+GLWV +SSLL++   A  RD ++  F+    I    +
Sbjct: 365  HLAPDCSEEDVLEILPVYADLVRGLWVCRSSLLYDDGLASKRDQIMLEFTKMESIPVKYV 424

Query: 1094 RMLTSKCTGLKSILIPLAVERRILKHWKFIKSTDMVFIRNNPKIVDDQEKAWLACWNNIK 915
              L         IL PL   R  L+ +KFI + D  FI+ +P IV +QE AW      + 
Sbjct: 425  ERLIRDERTRNMILNPLGKRREKLQDYKFIVAADSSFIKRHPHIVKEQENAWSVRAATMP 484

Query: 914  KSVGEKMHVPVPSGKRVKIADDVHESKDKAVNTAVSSLSSETQEHLLKILQKFFKDKKIR 735
              +  +        K    ++   +  D  +  A   L   ++ HL  +L   F   K+R
Sbjct: 485  DPLETRSATEQRKTKNSARSNIPVKGPDPVMGKAKDGLVQGSENHLRSVLDSVFIANKVR 544

Query: 734  SINSVVNELRGLAISNSSRPREDPKXXXXXXXXXXXXXXXXSELQSIVSQIAVDVHGTYV 555
            S  +VV +LR LA+  +S  ++  +                 EL + +  +AV +H  YV
Sbjct: 545  SFPAVVRDLRHLAVKYASDRKDGARFQALSNAAQTCVSLSRKELDASIRLVAVPIHDLYV 604

Query: 554  LKSTGSSXXXXXXXXXXXLFRGKEPKAKLNKQEVRMAAKARLQKDINDSDYNQVMRDLCD 375
             K+   +           LFRG+     + KQEV   A   L++ I++ +Y+Q + ++C 
Sbjct: 605  QKTEEKA---SVRNCLIMLFRGRASNVSVKKQEVIDCALKLLKRKISEKEYHQAVTEICI 661

Query: 374  SNK-GSWALKSGD 339
            SN+ G   LK+G+
Sbjct: 662  SNEDGHLVLKNGE 674


>ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
            X2 [Solanum tuberosum]
          Length = 657

 Score =  191 bits (485), Expect = 7e-46
 Identities = 129/382 (33%), Positives = 198/382 (51%), Gaps = 11/382 (2%)
 Frame = -3

Query: 1451 IPFMIKPSDYINSLYPGTSTDDKRTQAFSLRHLLSLPLEKRLKKWFSEVCQVNNFNALLD 1272
            +PF + P DY+N+ +PG  TD  R +    R L  LPLE+R++ W  E   ++ F+AL  
Sbjct: 279  VPFSMSPVDYLNAFFPGRPTDTDRLKILRTR-LSQLPLEERVRTWLLEGPPIHRFDALKH 337

Query: 1271 LAPDSSKEDVLKVLPHYADLVQGLWVTKSSLLH---EGEAALYRDYLLYLFSMNPIIQTD 1101
            LAPD+S +++++VL  YA LVQGLWV KSSL++    G   L R+++LY F+   +I+  
Sbjct: 338  LAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLYEFTKGILIKKS 397

Query: 1100 ----RLRMLTSKCTGLKSILIPLAVERRILKHWKFIKSTDMVFIRNNPKIVDDQEKAWLA 933
                R   L +    LKS    LAVER  L  WK  +  D  F      +V +++  W  
Sbjct: 398  VFGRRPEFLKAATPALKS----LAVERPDLNDWKLKEHPDKKFENLYGDVVREKQATWEC 453

Query: 932  CWNNIKKSVGEKMHVPVPSGKRVKIAD-DVHESKDKAVNTAV--SSLSSETQEHLLKILQ 762
                I   +    + P         AD     S DK  ++++  +S+S E +E L K LQ
Sbjct: 454  LGKQINDVLPGGRNRPTMKNPLNPNADIPALPSGDKPTSSSLLRTSMSEEIREALPKALQ 513

Query: 761  KFFKDKKIRSINSVVNELRGLAISNSSRPREDPKXXXXXXXXXXXXXXXXSELQSIVSQI 582
            + F+  K+ S   +   LR L +S S  P+  P+                 E+Q++++Q+
Sbjct: 514  EVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPR--KAITASIDVFDAPQEEIQAVINQV 571

Query: 581  AVDVHGTYVLKST-GSSXXXXXXXXXXXLFRGKEPKAKLNKQEVRMAAKARLQKDINDSD 405
            AV++HG YVLKS+  +            LF  + P AKL K  V  AAK +L +DI + +
Sbjct: 572  AVNIHGVYVLKSSPDNPQYDTLRKVVIDLFMAEGPSAKLKKASVTEAAKLQLNRDITNVE 631

Query: 404  YNQVMRDLCDSNKGSWALKSGD 339
            + +VM++LC S K +W L+SGD
Sbjct: 632  FLKVMKELCHSEKSAWVLRSGD 653


>ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
            X1 [Solanum tuberosum]
          Length = 669

 Score =  191 bits (485), Expect = 7e-46
 Identities = 129/382 (33%), Positives = 198/382 (51%), Gaps = 11/382 (2%)
 Frame = -3

Query: 1451 IPFMIKPSDYINSLYPGTSTDDKRTQAFSLRHLLSLPLEKRLKKWFSEVCQVNNFNALLD 1272
            +PF + P DY+N+ +PG  TD  R +    R L  LPLE+R++ W  E   ++ F+AL  
Sbjct: 291  VPFSMSPVDYLNAFFPGRPTDTDRLKILRTR-LSQLPLEERVRTWLLEGPPIHRFDALKH 349

Query: 1271 LAPDSSKEDVLKVLPHYADLVQGLWVTKSSLLH---EGEAALYRDYLLYLFSMNPIIQTD 1101
            LAPD+S +++++VL  YA LVQGLWV KSSL++    G   L R+++LY F+   +I+  
Sbjct: 350  LAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLYEFTKGILIKKS 409

Query: 1100 ----RLRMLTSKCTGLKSILIPLAVERRILKHWKFIKSTDMVFIRNNPKIVDDQEKAWLA 933
                R   L +    LKS    LAVER  L  WK  +  D  F      +V +++  W  
Sbjct: 410  VFGRRPEFLKAATPALKS----LAVERPDLNDWKLKEHPDKKFENLYGDVVREKQATWEC 465

Query: 932  CWNNIKKSVGEKMHVPVPSGKRVKIAD-DVHESKDKAVNTAV--SSLSSETQEHLLKILQ 762
                I   +    + P         AD     S DK  ++++  +S+S E +E L K LQ
Sbjct: 466  LGKQINDVLPGGRNRPTMKNPLNPNADIPALPSGDKPTSSSLLRTSMSEEIREALPKALQ 525

Query: 761  KFFKDKKIRSINSVVNELRGLAISNSSRPREDPKXXXXXXXXXXXXXXXXSELQSIVSQI 582
            + F+  K+ S   +   LR L +S S  P+  P+                 E+Q++++Q+
Sbjct: 526  EVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPR--KAITASIDVFDAPQEEIQAVINQV 583

Query: 581  AVDVHGTYVLKST-GSSXXXXXXXXXXXLFRGKEPKAKLNKQEVRMAAKARLQKDINDSD 405
            AV++HG YVLKS+  +            LF  + P AKL K  V  AAK +L +DI + +
Sbjct: 584  AVNIHGVYVLKSSPDNPQYDTLRKVVIDLFMAEGPSAKLKKASVTEAAKLQLNRDITNVE 643

Query: 404  YNQVMRDLCDSNKGSWALKSGD 339
            + +VM++LC S K +W L+SGD
Sbjct: 644  FLKVMKELCHSEKSAWVLRSGD 665


>dbj|BAK01665.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 677

 Score =  190 bits (482), Expect = 1e-45
 Identities = 124/373 (33%), Positives = 188/373 (50%), Gaps = 2/373 (0%)
 Frame = -3

Query: 1451 IPFMIKPSDYINSLYPGTSTDDKR-TQAFSLRHLLSLPLEKRLKKWFSEVCQVNNFNALL 1275
            I F +   DY  SL PG  T  K   +  ++R +LSLPLE+RLKKWF+EV QV+ F AL+
Sbjct: 306  IDFTMSTQDYAVSLCPGGPTGSKNINRCQAIREMLSLPLEERLKKWFTEVSQVSQFVALM 365

Query: 1274 DLAPDSSKEDVLKVLPHYADLVQGLWVTKSSLLHEGEAALYRDYLLYLFSMNPIIQTDRL 1095
             LAPD S+EDVL++LP YADLV+GLWV +SSLL++   A  RD ++  F+    I    +
Sbjct: 366  HLAPDCSEEDVLEILPVYADLVRGLWVCRSSLLYDDGLASKRDQIMLEFTKMESIPVKYV 425

Query: 1094 RMLTSKCTGLKSILIPLAVERRILKHWKFIKSTDMVFIRNNPKIVDDQEKAWLACWNNIK 915
              L         IL PL   R  L+ +KFI + D  FI+  P IV +QE AW      + 
Sbjct: 426  ERLIRDERTRNMILNPLGKRREKLQDYKFIVAADSSFIKRYPHIVKEQENAWSVRAATML 485

Query: 914  KSVGEKMHVPVPSGKRVKIADDVHESKDKAVNTAVSSLSSETQEHLLKILQKFFKDKKIR 735
              +  +        K    ++   +  D  +  A   L   ++ H+  +L   F   K+R
Sbjct: 486  DPLETRSATEQRKTKNSARSNIPVKGPDTVMGKAKDGLVQGSENHVRSVLDSVFTANKVR 545

Query: 734  SINSVVNELRGLAISNSSRPREDPKXXXXXXXXXXXXXXXXSELQSIVSQIAVDVHGTYV 555
            S  +VV +LR LA+  +S  +++ +                 EL + +  +AV VH  YV
Sbjct: 546  SFPAVVRDLRHLAVKYASNKKDEARFQALSNAAQTCVSLSRKELDASIRLVAVPVHDLYV 605

Query: 554  LKSTGSSXXXXXXXXXXXLFRGKEPKAKLNKQEVRMAAKARLQKDINDSDYNQVMRDLCD 375
             K+   +           LFRG+     + KQEV       L++ I++ +Y+Q + ++C 
Sbjct: 606  QKTEEKA---SVRNCLIMLFRGRASNGTVKKQEVIDCTLKLLKRKISEKEYHQAVTEICF 662

Query: 374  SNK-GSWALKSGD 339
            SN+ G   LK+G+
Sbjct: 663  SNEDGHLVLKNGE 675


>gb|EOX91150.1| Transcription regulators,zinc ion binding, putative isoform 3
            [Theobroma cacao]
          Length = 736

 Score =  187 bits (475), Expect = 1e-44
 Identities = 144/418 (34%), Positives = 212/418 (50%), Gaps = 46/418 (11%)
 Frame = -3

Query: 1454 QIPFMIKPSDYINSLYPGTSTDDKRTQAFSLRHLLSLPLEKRLKKWFSEVCQVNNFNALL 1275
            +I F + P DY++SL PG S ++K  Q  S R LLS+PLE+RLKK  SE    + F+AL 
Sbjct: 320  RIQFTMSPYDYVDSLCPGASNNNK-AQGPSRRLLLSIPLEERLKKLLSEGPPFHRFSALK 378

Query: 1274 DLAPDSSKEDVLKVLPHYADLVQGLWVTKSSLL--HEGEAALYRDYLLYLFSMNPIIQTD 1101
              APD+S ED+ +VL  +A LVQGLWV KSSLL   +   +L RDY+L LFS NPII   
Sbjct: 379  HFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDPYKSLARDYVLLLFSKNPIISLA 438

Query: 1100 RLRMLT-SKCTGLKSILIPLAVERRILKHWKFIKSTDMVFIRNNPKIVDDQEKAWLACWN 924
            ++  L+ S+   +K  L  LA+ER   K WK  ++ D  F +  P IV +QE+ W A  +
Sbjct: 439  QVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLYPDIVKNQEQIWRAGED 498

Query: 923  NIKKSV--GEKMHVPVPSGKRVKIADDVHESKDKAVN------TAVSSLSSETQEHLLKI 768
            N+   +  G K   P  +     I  +   + DK V        A  ++S ET+E + K 
Sbjct: 499  NVINHICRGAK-GGPSRTKPGTVIKPEKAMNSDKGVRRVAPAVQAGRTMSDETREAIPKA 557

Query: 767  LQKFFKDKKIRSINSVVNELRGLAISNSSRPREDPKXXXXXXXXXXXXXXXXSELQSIVS 588
            L+K F+  K+ S+  +   LR LA+S S+ P+ D +                 ELQ +VS
Sbjct: 558  LKKVFQTHKVCSLQLIRKGLRDLALSQSTLPKADAR---MVVKAAYGADAPEHELQEVVS 614

Query: 587  QIAVDVH-GTYVLKSTGSS---XXXXXXXXXXXLFRGKE--------------------- 483
            ++AV++H G +VL+S+                 +F+ +E                     
Sbjct: 615  EVAVELHGGLFVLRSSPEHPEYDPLRLHKYVQLVFKWEEMFMVSMFFLQNPSFSSELFFP 674

Query: 482  ----------PKAKLNKQEVRMAAKARLQKDINDSDYNQVMRDLCDSNKGSWALKSGD 339
                       K KL K +V  AA   L+++I++++YN+VM D C+     W LKSGD
Sbjct: 675  CREVVINLLRVKGKLKKADVSAAALLSLKREISNNEYNKVMSDFCEYKSSWWVLKSGD 732


>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
          Length = 643

 Score =  185 bits (470), Expect = 4e-44
 Identities = 130/375 (34%), Positives = 186/375 (49%), Gaps = 12/375 (3%)
 Frame = -3

Query: 1427 DYINSLYPGTSTDDKRTQAFSLRHLLSLPLEKRLKKWFSEVCQVNNFNALLDLAPDSSKE 1248
            DY+N+L PGTS ++  +   S R LLSLPLE+R + W  +   ++ F+AL  LAPD+S E
Sbjct: 310  DYVNTLCPGTSNENNGSNGPS-RVLLSLPLEERFRTWLLQGPPIHRFDALKHLAPDASVE 368

Query: 1247 DVLKVLPHYADLVQGLWVTKSSLLH---EGEAALYRDYLLYLFSMNPIIQTDRLRMLTSK 1077
            D+L VL  +A LVQGLW+ KSSLL+   +G  AL RDY+L LFS  PII   +L      
Sbjct: 369  DILAVLSQHAQLVQGLWIPKSSLLYGKDQGIDALARDYVLLLFSRTPIINNSQLPQQQKL 428

Query: 1076 CTGLKSILIPLAVERRILKHWKFIKSTDMVFIRNNPKIVDDQEKAWLACWNNI-KKSVGE 900
               ++ +L  +A ER  L  WKF +  DM FI+ NPKIV +QE+ W      I +K  G+
Sbjct: 429  NRAMRDVLDTVAFERVSLNDWKFKEPPDMTFIKLNPKIVREQEQTWERLEKLITEKIFGD 488

Query: 899  KMHVPVPSGKRVKIADDVHESK------DKAVNTAV--SSLSSETQEHLLKILQKFFKDK 744
            K      +  R    ++   SK        ++N  V    +S ET+E L K LQK F+  
Sbjct: 489  KNRPATKNSSRPLTTNNPATSKSLSKHASNSLNAGVPRRPMSEETREALPKALQKLFQSH 548

Query: 743  KIRSINSVVNELRGLAISNSSRPREDPKXXXXXXXXXXXXXXXXSELQSIVSQIAVDVHG 564
            K+     +   LR +A+S SSRP+   +                 ELQ+I+SQ+A+++HG
Sbjct: 549  KV-CFQQICQRLREMAVSESSRPKGFAR---EAIAAAHGVEAPPEELQAIISQVAINIHG 604

Query: 563  TYVLKSTGSSXXXXXXXXXXXLFRGKEPKAKLNKQEVRMAAKARLQKDINDSDYNQVMRD 384
             YVLKS+                                         ++      V+++
Sbjct: 605  VYVLKSS----------------------------------------PVHPEHDEFVVQE 624

Query: 383  LCDSNKGSWALKSGD 339
            LC S   +W LKSGD
Sbjct: 625  LCVSQGSAWVLKSGD 639


>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
            gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
            putative [Ricinus communis]
          Length = 677

 Score =  185 bits (469), Expect = 5e-44
 Identities = 131/365 (35%), Positives = 181/365 (49%), Gaps = 14/365 (3%)
 Frame = -3

Query: 1445 FMIKPSDYINSLYPGTSTDDKRTQAFSLRHLLSLPLEKRLKKWFSEVCQVNNFNALLDLA 1266
            F + P DY++SL P  S +  +++    R LLSLPL +RLKK   E   V  F+ L   A
Sbjct: 300  FTMTPYDYMSSLCPVASNEKTKSKGPPRRFLLSLPLAERLKKLILEGPPVQRFSVLKHFA 359

Query: 1265 PDSSKEDVLKVLPHYADLVQGLWVTKSSLLHEGEAAL--YRDYLLYLFSMNPIIQTDRLR 1092
            PD S EDVLKVL  Y  LVQGLW  KSSLL     +    RDY+L LFS N +I + ++ 
Sbjct: 360  PDDSVEDVLKVLQEYGQLVQGLWAPKSSLLFPDANSKQGIRDYVLLLFSKNLVINSSQVN 419

Query: 1091 MLTSKCTGLKSILIPLAVERRILKHWKFIKSTDMVFIRNNPKIVDDQEKAWLACWNNIKK 912
                    +KS L   AVER   K WKF + TD  FI+  P IV  QE+AW      + K
Sbjct: 420  FPVKIKEEIKSFLNLFAVERPSFKDWKFKEHTDTTFIKLYPDIVKKQEEAWDNTEKRLSK 479

Query: 911  ------SVGEKMHVPVPSGKRVKIAD-DVHESKDKAVN----TAVSSLSSETQEHLLKIL 765
                      K  +P P      +   D  +S  K  +       ++++ ET+E LLK L
Sbjct: 480  VFDRSGKASMKNAIPKPPMVHNTVKHLDSEKSMPKIASGMRRLTKTTITVETREALLKAL 539

Query: 764  QKFFKDKKIRSINSVVNELRGLAISNSSRPREDPKXXXXXXXXXXXXXXXXSELQSIVSQ 585
             K F+  K+ S   +   LR LA+S S+ P+ DP+                 ELQ I+SQ
Sbjct: 540  PKVFQSHKVCSFQLICQGLRDLAVSQSTLPKADPR---IAVAAASGADAPPEELQEIISQ 596

Query: 584  IAVDVHGTYVLKSTGS-SXXXXXXXXXXXLFRGKEPKAKLNKQEVRMAAKARLQKDINDS 408
            +A ++HG YVLKS+               L   + P AKL K EV  AA+   ++D+ + 
Sbjct: 597  VATNIHGFYVLKSSPEHPQYDELRKVIIDLLLARGPNAKLKKAEVFEAARLAFKRDVTNI 656

Query: 407  DYNQV 393
            +YN++
Sbjct: 657  EYNKL 661


>ref|XP_003573633.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
            [Brachypodium distachyon]
          Length = 663

 Score =  184 bits (466), Expect = 1e-43
 Identities = 123/376 (32%), Positives = 193/376 (51%), Gaps = 5/376 (1%)
 Frame = -3

Query: 1451 IPFMIKPSDYINSLYPGTSTDDKR-TQAFSLRHLLSLPLEKRLKKWFSEVCQVNNFNALL 1275
            I F +  SDY  SL PG  T  K   +  ++R +L LPLE RLKKWF+EV QV+ F+AL+
Sbjct: 295  IGFNMSTSDYWMSLCPGAPTGRKNINKCQAIREMLVLPLEDRLKKWFTEVSQVSRFDALM 354

Query: 1274 DLAPDSSKEDVLKVLPHYADLVQGLWVTKSSLLHEGEAALYRDYLLYLFSMNPIIQTDRL 1095
             LAP  S+ED+LK+LP YADLV+GLWV KSSLL++ E    RD +++ F+    +    +
Sbjct: 355  HLAPTYSEEDILKILPMYADLVRGLWVCKSSLLYDDELGCKRDKIVFEFTKKESVPMKYI 414

Query: 1094 RMLTSKCTGLKSILIPLAVERRILKHWKFIKSTDMVFIRNNPKIVDDQEKAWL---ACWN 924
              L         IL PL  +R  L+ +KFI   D  FI+    IV++QE AW       +
Sbjct: 415  DRLIRDDRTRHMILNPLCKKREKLEDYKFIAEADSSFIKRYSHIVNEQEIAWSVRGTTMS 474

Query: 923  NIKKSVGEKMHVPVPSGKRVKIADDVHESKDKAVNTAVSSLSSETQEHLLKILQKFFKDK 744
            +++++          +  R  I   + + +D+ +  A     SE    +  +L   F   
Sbjct: 475  DLQETCSTTEQRKTKNSTRSNI---IAKGRDQIIGKAKDVQGSENPVKI--VLDIVFTTN 529

Query: 743  KIRSINSVVNELRGLAISNSSRPREDPKXXXXXXXXXXXXXXXXSELQSIVSQIAVDVHG 564
            K+RS  +VV +LR LA   +S  ++  +                 EL + +  +AV VH 
Sbjct: 530  KVRSFAAVVRDLRHLAAKYASDRKDGARFQTLSNAAKTCVSLSPKELDASIRLVAVLVHD 589

Query: 563  TYVLKSTGSSXXXXXXXXXXXLFRGKEPKAKLNKQEVRMAAKARLQKDINDSDYNQVMRD 384
             Y+ K+   +           LFR ++P   +NKQE+   A   L+K+I++ +Y+Q + +
Sbjct: 590  VYIQKTEDKA---TLRNVLIKLFRDRDPNGTVNKQEILDYAGKVLKKEISEKEYHQAVSE 646

Query: 383  LC-DSNKGSWALKSGD 339
            +C  + +G   LK+GD
Sbjct: 647  ICISTEEGQLVLKNGD 662