BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00018519
         (344 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citr...    91   2e-16
ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-...    90   4e-16
dbj|BAA88921.1| sigma factor [Nicotiana tabacum]                       89   5e-16
ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [...    89   6e-16
ref|XP_006878659.1| hypothetical protein AMTR_s00011p00266100 [A...    86   4e-15
ref|XP_004307835.1| PREDICTED: RNA polymerase sigma factor sigA-...    84   1e-14
gb|EOY10269.1| Sigma factor A isoform 2 [Theobroma cacao]              84   2e-14
gb|EOY10268.1| Sigma factor A isoform 1 [Theobroma cacao]              84   2e-14
ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-...    84   2e-14
gb|AAC78467.1| RNA polymerase sigma factor 1 [Zea mays]                84   2e-14
tpg|DAA56044.1| TPA: hypothetical protein ZEAMMB73_174714 [Zea m...    84   2e-14
gb|ACF83862.1| unknown [Zea mays] gi|223944677|gb|ACN26422.1| un...    84   2e-14
ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA-...    83   3e-14
ref|XP_004972754.1| PREDICTED: RNA polymerase sigma factor sigA-...    81   1e-13
ref|XP_006302143.1| hypothetical protein CARUB_v10020145mg [Caps...    80   2e-13
ref|XP_006302141.1| hypothetical protein CARUB_v10020145mg [Caps...    80   2e-13
ref|XP_002443917.1| hypothetical protein SORBIDRAFT_07g004340 [S...    80   3e-13
emb|CAA74653.1| plastid RNA polymerase sigma factor [Sorghum bic...    80   3e-13
ref|XP_004499501.1| PREDICTED: RNA polymerase sigma factor sigA-...    79   5e-13
gb|AFW61126.1| RNA polymerase sigma factor 2 [Zea mays]                79   5e-13

>ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citrus clementina]
           gi|557539599|gb|ESR50643.1| hypothetical protein
           CICLE_v10031289mg [Citrus clementina]
          Length = 508

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 50/116 (43%), Positives = 73/116 (62%), Gaps = 4/116 (3%)
 Frame = -2

Query: 337 SLEVVILLQKSKLEKQWELE----LATVSAPEKSQQMPLIVRSGISARERRTFSRRKYIG 170
           S+E ++LLQKS LEKQW L     + T S  +K+ +   +  SG+SAR+RR  S++K + 
Sbjct: 107 SVEALLLLQKSMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILS 166

Query: 169 YNASEVPARRVKQPHLSVSSELLKSNRSGYVRGTISETFLTHAEVVSLSTKIEAGI 2
            N S +     KQ    +S EL++++  GYV+G +SE  LTHAEVV LS KI+ G+
Sbjct: 167 QNKSVLQQNGSKQLRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGL 222


>ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Citrus
           sinensis] gi|568862456|ref|XP_006484699.1| PREDICTED:
           RNA polymerase sigma factor sigA-like isoform X2 [Citrus
           sinensis] gi|568862458|ref|XP_006484700.1| PREDICTED:
           RNA polymerase sigma factor sigA-like isoform X3 [Citrus
           sinensis]
          Length = 508

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 50/116 (43%), Positives = 72/116 (62%), Gaps = 4/116 (3%)
 Frame = -2

Query: 337 SLEVVILLQKSKLEKQWELE----LATVSAPEKSQQMPLIVRSGISARERRTFSRRKYIG 170
           S+E ++LLQKS LEKQW L     + T S  +K+ +   +  SG+SAR+RR  S++K + 
Sbjct: 107 SVEALLLLQKSMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILS 166

Query: 169 YNASEVPARRVKQPHLSVSSELLKSNRSGYVRGTISETFLTHAEVVSLSTKIEAGI 2
            N S       KQ    +S EL++++  GYV+G +SE  LTHAEVV LS KI+ G+
Sbjct: 167 QNKSVPQQNGSKQLRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGL 222


>dbj|BAA88921.1| sigma factor [Nicotiana tabacum]
          Length = 508

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 52/118 (44%), Positives = 72/118 (61%), Gaps = 4/118 (3%)
 Frame = -2

Query: 343 ESSLEVVILLQKSKLEKQWELELA-TVSAP---EKSQQMPLIVRSGISARERRTFSRRKY 176
           + S+EV++LLQKS LEKQW L L  T++A    EK  +   I  SG SAR RR  SR++ 
Sbjct: 105 DESVEVLLLLQKSMLEKQWNLSLEQTLTASPQHEKKSKKMHITCSGTSARRRRMDSRQRV 164

Query: 175 IGYNASEVPARRVKQPHLSVSSELLKSNRSGYVRGTISETFLTHAEVVSLSTKIEAGI 2
           +  ++S  P    K     +  ELL++   GYV+G +SE  LTHAEV+ LS KI+ G+
Sbjct: 165 LDRHSSATPTSAAKPLRSIIGPELLQNRLKGYVKGVVSEELLTHAEVLQLSKKIQVGL 222


>ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223536754|gb|EEF38395.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 508

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 53/116 (45%), Positives = 72/116 (62%), Gaps = 4/116 (3%)
 Frame = -2

Query: 337 SLEVVILLQKSKLEKQWELEL----ATVSAPEKSQQMPLIVRSGISARERRTFSRRKYIG 170
           S+E ++LLQKS LEKQW L      ++ S   KSQ+   +  SG+SAR+RR   RRK + 
Sbjct: 107 SVEALLLLQKSMLEKQWNLSFERTDSSDSPSRKSQKKIPVTCSGVSARQRRINIRRKNLS 166

Query: 169 YNASEVPARRVKQPHLSVSSELLKSNRSGYVRGTISETFLTHAEVVSLSTKIEAGI 2
            +   V A   KQ   +VS ELL++   GYV+G +SE  L+HAEVV LS  I+AG+
Sbjct: 167 QSKFTVQANVFKQLKSAVSPELLQNRLKGYVKGVVSEELLSHAEVVRLSRIIKAGL 222


>ref|XP_006878659.1| hypothetical protein AMTR_s00011p00266100 [Amborella trichopoda]
           gi|548832002|gb|ERM94804.1| hypothetical protein
           AMTR_s00011p00266100 [Amborella trichopoda]
          Length = 497

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 55/118 (46%), Positives = 72/118 (61%), Gaps = 4/118 (3%)
 Frame = -2

Query: 343 ESSLEVVILLQKSKLEKQWELEL----ATVSAPEKSQQMPLIVRSGISARERRTFSRRKY 176
           ESSLE +ILLQKS LEKQW L       +    E+S +   ++ SG SAR+RR  S R+ 
Sbjct: 95  ESSLEALILLQKSMLEKQWNLSFDQAGTSTDLCEESCKKLGVISSGASARQRRN-SLRRP 153

Query: 175 IGYNASEVPARRVKQPHLSVSSELLKSNRSGYVRGTISETFLTHAEVVSLSTKIEAGI 2
           +   A  V  RR KQ    VS ELL+ +  GYV+G  +++ L+HAEVV LS KI AG+
Sbjct: 154 LNQRAGTVLVRRKKQATPIVSPELLQGHFRGYVKGISNDSLLSHAEVVHLSWKIRAGL 211


>ref|XP_004307835.1| PREDICTED: RNA polymerase sigma factor sigA-like [Fragaria vesca
           subsp. vesca]
          Length = 511

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 49/115 (42%), Positives = 67/115 (58%), Gaps = 1/115 (0%)
 Frame = -2

Query: 343 ESSLEVVILLQKSKLEKQWELELATVSAPEKSQQMPLIVR-SGISARERRTFSRRKYIGY 167
           E S+E ++LLQKS LEKQW L      +  K     + V  SG+SAR+RR  ++RK    
Sbjct: 111 EYSVEALLLLQKSLLEKQWNLSFEKKLSTRKITDNKIPVTCSGVSARQRRMSTKRKAFSK 170

Query: 166 NASEVPARRVKQPHLSVSSELLKSNRSGYVRGTISETFLTHAEVVSLSTKIEAGI 2
           N SE+     K    ++S  LL++  SGYV+G  S+  LTH EVV LS KI+ G+
Sbjct: 171 NTSELQPSTNKYCRATISPSLLQNRTSGYVKGVTSDHLLTHTEVVRLSKKIKIGL 225


>gb|EOY10269.1| Sigma factor A isoform 2 [Theobroma cacao]
          Length = 450

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 51/116 (43%), Positives = 70/116 (60%), Gaps = 4/116 (3%)
 Frame = -2

Query: 337 SLEVVILLQKSKLEKQWELELA----TVSAPEKSQQMPLIVRSGISARERRTFSRRKYIG 170
           S+E ++LLQKS LEKQW L       T S   K  +   +  SG+SAR+RR  ++RK + 
Sbjct: 108 SVEALLLLQKSMLEKQWTLSFERTVFTESPSRKIHKKIPVTCSGVSARQRRFNTKRKILI 167

Query: 169 YNASEVPARRVKQPHLSVSSELLKSNRSGYVRGTISETFLTHAEVVSLSTKIEAGI 2
            N S +     KQ    +S ELL+S   GYV+G +S+  L+HAEVV LS KI+AG+
Sbjct: 168 QNKSIIQPN-AKQLRSLISPELLQSRLKGYVKGVVSDELLSHAEVVRLSKKIKAGL 222


>gb|EOY10268.1| Sigma factor A isoform 1 [Theobroma cacao]
          Length = 508

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 51/116 (43%), Positives = 70/116 (60%), Gaps = 4/116 (3%)
 Frame = -2

Query: 337 SLEVVILLQKSKLEKQWELELA----TVSAPEKSQQMPLIVRSGISARERRTFSRRKYIG 170
           S+E ++LLQKS LEKQW L       T S   K  +   +  SG+SAR+RR  ++RK + 
Sbjct: 108 SVEALLLLQKSMLEKQWTLSFERTVFTESPSRKIHKKIPVTCSGVSARQRRFNTKRKILI 167

Query: 169 YNASEVPARRVKQPHLSVSSELLKSNRSGYVRGTISETFLTHAEVVSLSTKIEAGI 2
            N S +     KQ    +S ELL+S   GYV+G +S+  L+HAEVV LS KI+AG+
Sbjct: 168 QNKSIIQPN-AKQLRSLISPELLQSRLKGYVKGVVSDELLSHAEVVRLSKKIKAGL 222


>ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-like [Cucumis sativus]
           gi|449514942|ref|XP_004164521.1| PREDICTED: RNA
           polymerase sigma factor sigA-like [Cucumis sativus]
          Length = 508

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 48/116 (41%), Positives = 72/116 (62%), Gaps = 4/116 (3%)
 Frame = -2

Query: 337 SLEVVILLQKSKLEKQWELE----LATVSAPEKSQQMPLIVRSGISARERRTFSRRKYIG 170
           ++E ++LLQKS LEKQW L     ++T +  EK+ +   +  SG+SAR+RR  S+RK   
Sbjct: 107 TVEALLLLQKSMLEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQS 166

Query: 169 YNASEVPARRVKQPHLSVSSELLKSNRSGYVRGTISETFLTHAEVVSLSTKIEAGI 2
            +      +  KQ   ++S ELL++   GYV+G +SE  L+HAEVV LS KI+ G+
Sbjct: 167 KHVFMAQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGL 222


>gb|AAC78467.1| RNA polymerase sigma factor 1 [Zea mays]
          Length = 398

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 50/116 (43%), Positives = 73/116 (62%), Gaps = 2/116 (1%)
 Frame = -2

Query: 343 ESSLEVVILLQKSKLEKQWELELAT-VSAPEKSQQMPLIV-RSGISARERRTFSRRKYIG 170
           ESSLE ++LLQ+S LEKQWEL     +S  ++ ++  ++V RSG+SAR+RR   RR+   
Sbjct: 7   ESSLEAIVLLQRSMLEKQWELPFEDDISTEDEDERSTVVVARSGVSARQRRMSGRRR--- 63

Query: 169 YNASEVPARRVKQPHLSVSSELLKSNRSGYVRGTISETFLTHAEVVSLSTKIEAGI 2
                     V +  ++VS EL++S    Y+RGT+S+  LTH +VV LS KI+ GI
Sbjct: 64  -------GAFVGRKSVTVSPELMQSRNRIYLRGTVSKDLLTHKQVVQLSRKIKDGI 112


>tpg|DAA56044.1| TPA: hypothetical protein ZEAMMB73_174714 [Zea mays]
           gi|414878914|tpg|DAA56045.1| TPA: hypothetical protein
           ZEAMMB73_174714 [Zea mays] gi|414878915|tpg|DAA56046.1|
           TPA: hypothetical protein ZEAMMB73_174714 [Zea mays]
          Length = 287

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 50/119 (42%), Positives = 70/119 (58%), Gaps = 5/119 (4%)
 Frame = -2

Query: 343 ESSLEVVILLQKSKLEKQWELEL-----ATVSAPEKSQQMPLIVRSGISARERRTFSRRK 179
           ESSLE ++LLQ+S LEKQWEL       +T    E  +   ++ RSG+SAR+RR   RR+
Sbjct: 102 ESSLEAIVLLQRSMLEKQWELPFEDDISSTEDEDEDERSTVVVARSGVSARQRRMSGRRR 161

Query: 178 YIGYNASEVPARRVKQPHLSVSSELLKSNRSGYVRGTISETFLTHAEVVSLSTKIEAGI 2
                        V +  ++VS EL++S    Y+RGT+S+  LTH +VV LS KI+ GI
Sbjct: 162 ----------GAVVGRKSVTVSPELMQSRNRIYLRGTVSKDLLTHKQVVQLSRKIKDGI 210


>gb|ACF83862.1| unknown [Zea mays] gi|223944677|gb|ACN26422.1| unknown [Zea mays]
           gi|413917282|gb|AFW57214.1| RNA polymerase sigma factor
           1 isoform 1 [Zea mays] gi|413917283|gb|AFW57215.1| RNA
           polymerase sigma factor 1 isoform 2 [Zea mays]
           gi|413917284|gb|AFW57216.1| RNA polymerase sigma factor
           1 isoform 3 [Zea mays]
          Length = 496

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 50/119 (42%), Positives = 70/119 (58%), Gaps = 5/119 (4%)
 Frame = -2

Query: 343 ESSLEVVILLQKSKLEKQWELEL-----ATVSAPEKSQQMPLIVRSGISARERRTFSRRK 179
           ESSLE ++LLQ+S LEKQWEL       +T    E  +   ++ RSG+SAR+RR   RR+
Sbjct: 102 ESSLEAIVLLQRSMLEKQWELPFEDDISSTEDEDEDERSTVVVARSGVSARQRRMSGRRR 161

Query: 178 YIGYNASEVPARRVKQPHLSVSSELLKSNRSGYVRGTISETFLTHAEVVSLSTKIEAGI 2
                        V +  ++VS EL++S    Y+RGT+S+  LTH +VV LS KI+ GI
Sbjct: 162 ----------GAVVGRKSVTVSPELMQSRNRIYLRGTVSKDLLTHKQVVQLSRKIKDGI 210


>ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA-like [Solanum
           lycopersicum]
          Length = 509

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 49/118 (41%), Positives = 67/118 (56%), Gaps = 4/118 (3%)
 Frame = -2

Query: 343 ESSLEVVILLQKSKLEKQWEL---ELATVSAPEKSQQMPL-IVRSGISARERRTFSRRKY 176
           + S+EV++LLQKS LEKQW L   E  T S   K     + I  SG SAR RR  SR++ 
Sbjct: 106 DDSVEVLLLLQKSMLEKQWNLSAEETLTASTQRKKNCKKMHIACSGTSARRRRMDSRQRV 165

Query: 175 IGYNASEVPARRVKQPHLSVSSELLKSNRSGYVRGTISETFLTHAEVVSLSTKIEAGI 2
           +   +S  P    K     +  +LL++   GYV+G +SE  LTH EV+ LS KI+ G+
Sbjct: 166 LAQKSSATPISATKPLRSILGPDLLQNRLKGYVKGIVSEELLTHTEVLQLSKKIKVGL 223


>ref|XP_004972754.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1
           [Setaria italica] gi|514793183|ref|XP_004972755.1|
           PREDICTED: RNA polymerase sigma factor sigA-like isoform
           X2 [Setaria italica]
          Length = 499

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 48/120 (40%), Positives = 69/120 (57%), Gaps = 6/120 (5%)
 Frame = -2

Query: 343 ESSLEVVILLQKSKLEKQWELELATVSAPEK------SQQMPLIVRSGISARERRTFSRR 182
           ESSLE ++LLQ+S LEKQWEL        E       ++   ++ RSG+SAR+RR   RR
Sbjct: 106 ESSLEAIVLLQRSMLEKQWELPFEDEDEEEHHSESLFAKSTVVVARSGVSARQRRMSGRR 165

Query: 181 KYIGYNASEVPARRVKQPHLSVSSELLKSNRSGYVRGTISETFLTHAEVVSLSTKIEAGI 2
           +  G  +            +++S EL++S    Y+RGT+S+  LTH +VV LS KI+ GI
Sbjct: 166 RGTGRKS------------VAISPELMQSRNRIYLRGTVSKELLTHKQVVQLSKKIKDGI 213


>ref|XP_006302143.1| hypothetical protein CARUB_v10020145mg [Capsella rubella]
           gi|482570853|gb|EOA35041.1| hypothetical protein
           CARUB_v10020145mg [Capsella rubella]
          Length = 521

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 52/122 (42%), Positives = 73/122 (59%), Gaps = 10/122 (8%)
 Frame = -2

Query: 337 SLEVVILLQKSKLEKQWELELATVSAPEKS-------QQMPLIVRSGISARERRTFSRRK 179
           S+E ++LLQKS LEK W L     ++ E S       +++P+I  SGISAR+RR  +++K
Sbjct: 114 SVEALLLLQKSMLEKSWNLSFEKAASSESSGKRTIRKKKVPVITCSGISARQRRIGAKKK 173

Query: 178 YIGYNASEVP-ARRVKQPHLSVSSELLKSNR--SGYVRGTISETFLTHAEVVSLSTKIEA 8
               +A  V      KQ    +SSEL + NR   GYV+G ISE  L+H EVV LS KI++
Sbjct: 174 TNMTSAKAVSDVSSGKQVRSVMSSELFQHNRVRGGYVKGVISEDVLSHTEVVRLSKKIKS 233

Query: 7   GI 2
           G+
Sbjct: 234 GL 235


>ref|XP_006302141.1| hypothetical protein CARUB_v10020145mg [Capsella rubella]
           gi|565489005|ref|XP_006302142.1| hypothetical protein
           CARUB_v10020145mg [Capsella rubella]
           gi|482570851|gb|EOA35039.1| hypothetical protein
           CARUB_v10020145mg [Capsella rubella]
           gi|482570852|gb|EOA35040.1| hypothetical protein
           CARUB_v10020145mg [Capsella rubella]
          Length = 464

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 52/122 (42%), Positives = 73/122 (59%), Gaps = 10/122 (8%)
 Frame = -2

Query: 337 SLEVVILLQKSKLEKQWELELATVSAPEKS-------QQMPLIVRSGISARERRTFSRRK 179
           S+E ++LLQKS LEK W L     ++ E S       +++P+I  SGISAR+RR  +++K
Sbjct: 115 SVEALLLLQKSMLEKSWNLSFEKAASSESSGKRTIRKKKVPVITCSGISARQRRIGAKKK 174

Query: 178 YIGYNASEVP-ARRVKQPHLSVSSELLKSNR--SGYVRGTISETFLTHAEVVSLSTKIEA 8
               +A  V      KQ    +SSEL + NR   GYV+G ISE  L+H EVV LS KI++
Sbjct: 175 TNMTSAKAVSDVSSGKQVRSVMSSELFQHNRVRGGYVKGVISEDVLSHTEVVRLSKKIKS 234

Query: 7   GI 2
           G+
Sbjct: 235 GL 236


>ref|XP_002443917.1| hypothetical protein SORBIDRAFT_07g004340 [Sorghum bicolor]
           gi|241940267|gb|EES13412.1| hypothetical protein
           SORBIDRAFT_07g004340 [Sorghum bicolor]
          Length = 500

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 46/116 (39%), Positives = 70/116 (60%), Gaps = 2/116 (1%)
 Frame = -2

Query: 343 ESSLEVVILLQKSKLEKQWELELATVSAPEK--SQQMPLIVRSGISARERRTFSRRKYIG 170
           ESSLE ++LLQ+S LEKQW+L        ++  ++   ++ RSG+SAR+RR   RR+  G
Sbjct: 111 ESSLEAIVLLQRSMLEKQWQLPFEDEDEDDERLTKAAVVVARSGVSARQRRMSGRRRGPG 170

Query: 169 YNASEVPARRVKQPHLSVSSELLKSNRSGYVRGTISETFLTHAEVVSLSTKIEAGI 2
             +            ++VS EL++S    Y+RGT+S+  LTH +V+ LS KI+ GI
Sbjct: 171 RKS------------VTVSPELMQSRNRIYLRGTVSKDLLTHKQVIQLSRKIKDGI 214


>emb|CAA74653.1| plastid RNA polymerase sigma factor [Sorghum bicolor]
          Length = 500

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 46/116 (39%), Positives = 70/116 (60%), Gaps = 2/116 (1%)
 Frame = -2

Query: 343 ESSLEVVILLQKSKLEKQWELELATVSAPEK--SQQMPLIVRSGISARERRTFSRRKYIG 170
           ESSLE ++LLQ+S LEKQW+L        ++  ++   ++ RSG+SAR+RR   RR+  G
Sbjct: 111 ESSLEAIVLLQRSMLEKQWQLPFEDEDEDDERLTKAAVVVARSGVSARQRRMSGRRRGPG 170

Query: 169 YNASEVPARRVKQPHLSVSSELLKSNRSGYVRGTISETFLTHAEVVSLSTKIEAGI 2
             +            ++VS EL++S    Y+RGT+S+  LTH +V+ LS KI+ GI
Sbjct: 171 RKS------------VTVSPELMQSRNRIYLRGTVSKDLLTHKQVIQLSRKIKDGI 214


>ref|XP_004499501.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X3 [Cicer
           arietinum]
          Length = 513

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 47/117 (40%), Positives = 73/117 (62%), Gaps = 5/117 (4%)
 Frame = -2

Query: 337 SLEVVILLQKSKLEKQW----ELELATVSAPE-KSQQMPLIVRSGISARERRTFSRRKYI 173
           S++ ++L+QKS LEKQW    E E+ T ++   K+++   +  SG+SAR+RR  S+RK  
Sbjct: 117 SVDALLLMQKSMLEKQWCLSFEREVVTENSMRVKNRRKVTVTCSGVSARQRRMNSKRKIS 176

Query: 172 GYNASEVPARRVKQPHLSVSSELLKSNRSGYVRGTISETFLTHAEVVSLSTKIEAGI 2
               S V  R       +++ ELL++   GYV+G +SE  L+HA+VV LS KI+AG+
Sbjct: 177 SKTGSAVQMRS------AITPELLQNRLKGYVKGVVSEELLSHAQVVKLSQKIKAGL 227


>gb|AFW61126.1| RNA polymerase sigma factor 2 [Zea mays]
          Length = 504

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 49/121 (40%), Positives = 72/121 (59%), Gaps = 7/121 (5%)
 Frame = -2

Query: 343 ESSLEVVILLQKSKLEKQWEL--ELATVSAPEK-----SQQMPLIVRSGISARERRTFSR 185
           ESSLE ++LLQ+S LEKQWEL  E   +S  ++     S+   +  RSG+SAR+RR   R
Sbjct: 110 ESSLEAIVLLQRSMLEKQWELPFEDDIISTDDEQDDRVSKATVVAARSGVSARQRRMSGR 169

Query: 184 RKYIGYNASEVPARRVKQPHLSVSSELLKSNRSGYVRGTISETFLTHAEVVSLSTKIEAG 5
           R+  G  +            +++S EL++S    Y+RGT+S+  LTH +V+ LS KI+ G
Sbjct: 170 RRGAGRKS------------VAISPELMQSRNRIYLRGTVSKDLLTHKQVIQLSRKIKDG 217

Query: 4   I 2
           I
Sbjct: 218 I 218