BLASTX nr result
ID: Zingiber23_contig00017788
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00017788
(414 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003563076.1| PREDICTED: regulator of nonsense transcripts... 94 2e-17
ref|XP_002279304.2| PREDICTED: regulator of nonsense transcripts... 94 2e-17
ref|XP_006362492.1| PREDICTED: regulator of nonsense transcripts... 92 7e-17
ref|XP_004244550.1| PREDICTED: regulator of nonsense transcripts... 92 7e-17
ref|XP_003611424.1| Regulator of nonsense transcripts-like prote... 92 9e-17
ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putati... 91 1e-16
ref|XP_004511759.1| PREDICTED: regulator of nonsense transcripts... 90 4e-16
ref|XP_004511758.1| PREDICTED: regulator of nonsense transcripts... 90 4e-16
dbj|BAD30435.1| putative type 1 RNA helicase [Oryza sativa Japon... 90 4e-16
gb|EEC82084.1| hypothetical protein OsI_26082 [Oryza sativa Indi... 90 4e-16
gb|EMJ11627.1| hypothetical protein PRUPE_ppa000334mg [Prunus pe... 89 5e-16
ref|XP_002329539.1| predicted protein [Populus trichocarpa] gi|5... 89 5e-16
ref|XP_002326699.1| predicted protein [Populus trichocarpa] gi|5... 89 5e-16
ref|XP_004300289.1| PREDICTED: regulator of nonsense transcripts... 89 8e-16
ref|XP_004163978.1| PREDICTED: regulator of nonsense transcripts... 88 1e-15
ref|XP_006590595.1| PREDICTED: regulator of nonsense transcripts... 87 2e-15
gb|ESW28609.1| hypothetical protein PHAVU_002G003300g [Phaseolus... 87 2e-15
gb|ESW28608.1| hypothetical protein PHAVU_002G003300g [Phaseolus... 87 2e-15
ref|XP_003517385.1| PREDICTED: regulator of nonsense transcripts... 87 2e-15
ref|XP_004150168.1| PREDICTED: LOW QUALITY PROTEIN: regulator of... 87 3e-15
>ref|XP_003563076.1| PREDICTED: regulator of nonsense transcripts 1 homolog
[Brachypodium distachyon]
Length = 1267
Score = 94.0 bits (232), Expect = 2e-17
Identities = 53/149 (35%), Positives = 70/149 (46%), Gaps = 12/149 (8%)
Frame = +2
Query: 2 FLEFNTQXXXXXXXXXXXXSQPSRSPAGPHLPPPSEPEQDSAASELHAP-------EPTL 160
FLEFNTQ SQP+RS PPP+ +++S P +P L
Sbjct: 34 FLEFNTQGDDFEYPDFPELSQPARSA-----PPPATVTSSTSSSWPAPPPPPDASQDPDL 88
Query: 161 SPSASTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSELNFEE-----TGDEGYEFGEG 325
P STPL ++ L+FEE G++GY++G+G
Sbjct: 89 VPQDSTPLASSSSPSPRSSASKARASAAVADGLAAGVAALSFEEPPGAGAGEDGYDYGKG 148
Query: 326 NLTEHACRYCGVQDPGCVVRCNVPTCRKW 412
+ EHACRYCG+ P CV RCNVP+CRKW
Sbjct: 149 DFVEHACRYCGIHSPACVARCNVPSCRKW 177
>ref|XP_002279304.2| PREDICTED: regulator of nonsense transcripts 1 homolog [Vitis
vinifera] gi|297742168|emb|CBI33955.3| unnamed protein
product [Vitis vinifera]
Length = 1267
Score = 94.0 bits (232), Expect = 2e-17
Identities = 54/138 (39%), Positives = 69/138 (50%), Gaps = 1/138 (0%)
Frame = +2
Query: 2 FLEFNTQXXXXXXXXXXXXSQPSRSPAGPHLPPPSEPEQDSAASELHAPEPTLSPSASTP 181
F+EFNTQ +PS P PS+ D+A + A + +P ++T
Sbjct: 24 FIEFNTQGEDFDYPDFRDPIRPSAWPT------PSDSISDAADHQSDASPVSAAPGSATK 77
Query: 182 LXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSELNFEETGDE-GYEFGEGNLTEHACRYCG 358
MS LNFEETGD+ YE+G+G+ TEHACRYCG
Sbjct: 78 ARGAAGSSSSSQAAVDALAAG--------MSGLNFEETGDDDNYEYGKGDFTEHACRYCG 129
Query: 359 VQDPGCVVRCNVPTCRKW 412
VQ+P CVVRCNVP+CRKW
Sbjct: 130 VQNPACVVRCNVPSCRKW 147
>ref|XP_006362492.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Solanum
tuberosum]
Length = 1264
Score = 92.0 bits (227), Expect = 7e-17
Identities = 60/139 (43%), Positives = 69/139 (49%), Gaps = 2/139 (1%)
Frame = +2
Query: 2 FLEFNTQXXXXXXXXXXXXSQPSRSPAGPHLPPPSEPEQDSAASELHAPEPTLSPSASTP 181
FLEFNTQ SQP RS A P PS DS SE+ P+ S ST
Sbjct: 24 FLEFNTQGEEFDYPEFQELSQPIRSSAWP---TPS----DSLVSEVPDRPPSSEASPSTK 76
Query: 182 LXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSELNFEETGD-EGYEFGEGNL-TEHACRYC 355
MS LNFEETGD EG+E+G+G+ EHAC+YC
Sbjct: 77 ---SRGGGGNSNVSSSSNQASVVDALAAGMSGLNFEETGDDEGFEYGKGDFGVEHACKYC 133
Query: 356 GVQDPGCVVRCNVPTCRKW 412
GV +P CVVRCNVP+CRKW
Sbjct: 134 GVANPACVVRCNVPSCRKW 152
>ref|XP_004244550.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Solanum
lycopersicum]
Length = 1264
Score = 92.0 bits (227), Expect = 7e-17
Identities = 60/139 (43%), Positives = 69/139 (49%), Gaps = 2/139 (1%)
Frame = +2
Query: 2 FLEFNTQXXXXXXXXXXXXSQPSRSPAGPHLPPPSEPEQDSAASELHAPEPTLSPSASTP 181
FLEFNTQ SQP RS A P PS DS SE+ P+ S ST
Sbjct: 24 FLEFNTQGEEFDYPEFQELSQPIRSSAWP---TPS----DSLVSEVPDRPPSSEASPSTK 76
Query: 182 LXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSELNFEETGD-EGYEFGEGNL-TEHACRYC 355
MS LNFEETGD EG+E+G+G+ EHAC+YC
Sbjct: 77 ---SRGGGGNSNVSSSSNQASVVDALAAGMSGLNFEETGDDEGFEYGKGDFGVEHACKYC 133
Query: 356 GVQDPGCVVRCNVPTCRKW 412
GV +P CVVRCNVP+CRKW
Sbjct: 134 GVTNPACVVRCNVPSCRKW 152
>ref|XP_003611424.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula] gi|355512759|gb|AES94382.1| Regulator of
nonsense transcripts-like protein [Medicago truncatula]
Length = 1253
Score = 91.7 bits (226), Expect = 9e-17
Identities = 56/138 (40%), Positives = 66/138 (47%), Gaps = 1/138 (0%)
Frame = +2
Query: 2 FLEFNTQXXXXXXXXXXXXSQPSRSPAGPHLPPPSEPEQDSAASELHAPEPTLSPSASTP 181
FLEFNTQ P RSP P PS+ D + S SP ++ P
Sbjct: 24 FLEFNTQGEDFDYPDFR---DPIRSPVA--WPTPSDSLADPSGSAGSDHHSDASPVSAAP 78
Query: 182 LXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSELNFEETGDE-GYEFGEGNLTEHACRYCG 358
MS LNFE+TGD+ YEFG+G+ TEHACRYCG
Sbjct: 79 TKGGRSGGGSGSGSQMVDSLASG------MSGLNFEDTGDDDNYEFGKGDFTEHACRYCG 132
Query: 359 VQDPGCVVRCNVPTCRKW 412
V +P CVVRCNVP+CRKW
Sbjct: 133 VSNPACVVRCNVPSCRKW 150
>ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
gi|223531797|gb|EEF33616.1| nonsense-mediated mRNA decay
protein, putative [Ricinus communis]
Length = 1280
Score = 91.3 bits (225), Expect = 1e-16
Identities = 38/49 (77%), Positives = 43/49 (87%), Gaps = 1/49 (2%)
Frame = +2
Query: 269 MSELNFEETGDE-GYEFGEGNLTEHACRYCGVQDPGCVVRCNVPTCRKW 412
M LNFEETGDE GYEFG+G+ TEHACRYCGV +P CVVRCN+P+CRKW
Sbjct: 121 MGGLNFEETGDEDGYEFGKGDFTEHACRYCGVSNPACVVRCNIPSCRKW 169
>ref|XP_004511759.1| PREDICTED: regulator of nonsense transcripts 1 homolog isoform X2
[Cicer arietinum]
Length = 1259
Score = 89.7 bits (221), Expect = 4e-16
Identities = 53/138 (38%), Positives = 64/138 (46%), Gaps = 1/138 (0%)
Frame = +2
Query: 2 FLEFNTQXXXXXXXXXXXXSQPSRSPAGPHLPPPSEPEQDSAASELHAPEPTLSPSASTP 181
FLEFNTQ P RSP P S + + + SP + TP
Sbjct: 24 FLEFNTQGEDFDYPEFR---DPIRSPVAWPTPSDSLADPSERGGAVSDHQSDASPVSVTP 80
Query: 182 LXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSELNFEETGDE-GYEFGEGNLTEHACRYCG 358
MS LNFE+TGD+ YE+G+G+ TEHACRYCG
Sbjct: 81 -----GSATKGRSGSGGGSSQMVDSLAAGMSGLNFEDTGDDDNYEYGKGDFTEHACRYCG 135
Query: 359 VQDPGCVVRCNVPTCRKW 412
V +P CVVRCNVP+CRKW
Sbjct: 136 VSNPACVVRCNVPSCRKW 153
>ref|XP_004511758.1| PREDICTED: regulator of nonsense transcripts 1 homolog isoform X1
[Cicer arietinum]
Length = 1261
Score = 89.7 bits (221), Expect = 4e-16
Identities = 53/138 (38%), Positives = 64/138 (46%), Gaps = 1/138 (0%)
Frame = +2
Query: 2 FLEFNTQXXXXXXXXXXXXSQPSRSPAGPHLPPPSEPEQDSAASELHAPEPTLSPSASTP 181
FLEFNTQ P RSP P S + + + SP + TP
Sbjct: 24 FLEFNTQGEDFDYPEFR---DPIRSPVAWPTPSDSLADPSERGGAVSDHQSDASPVSVTP 80
Query: 182 LXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSELNFEETGDE-GYEFGEGNLTEHACRYCG 358
MS LNFE+TGD+ YE+G+G+ TEHACRYCG
Sbjct: 81 -----GSATKGRSGSGGGSSQMVDSLAAGMSGLNFEDTGDDDNYEYGKGDFTEHACRYCG 135
Query: 359 VQDPGCVVRCNVPTCRKW 412
V +P CVVRCNVP+CRKW
Sbjct: 136 VSNPACVVRCNVPSCRKW 153
>dbj|BAD30435.1| putative type 1 RNA helicase [Oryza sativa Japonica Group]
gi|222637078|gb|EEE67210.1| hypothetical protein
OsJ_24327 [Oryza sativa Japonica Group]
Length = 1277
Score = 89.7 bits (221), Expect = 4e-16
Identities = 52/159 (32%), Positives = 70/159 (44%), Gaps = 22/159 (13%)
Frame = +2
Query: 2 FLEFNTQXXXXXXXXXXXXSQPSRS-----------------PAGPHLPPPSEPEQDSAA 130
FLEFNTQ SQP+RS P+ PPP P D++
Sbjct: 34 FLEFNTQGDDFDYPDFPELSQPARSAPPTSAPGVPGSAGSPSPSSSSWPPPPPPPPDASQ 93
Query: 131 SELHAPEPTLSPSASTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSELNFEE-----T 295
AP +P AS+ ++ L+FEE
Sbjct: 94 DPDLAPREATTPPASSS------SPSPRASAKARASAAAADGLASGVAALSFEEPLGAGA 147
Query: 296 GDEGYEFGEGNLTEHACRYCGVQDPGCVVRCNVPTCRKW 412
G++GY++G+G+ EHACRYCG+ +P CV RCNVP+CRKW
Sbjct: 148 GEDGYDYGKGDFVEHACRYCGIHNPACVARCNVPSCRKW 186
>gb|EEC82084.1| hypothetical protein OsI_26082 [Oryza sativa Indica Group]
Length = 1277
Score = 89.7 bits (221), Expect = 4e-16
Identities = 52/159 (32%), Positives = 70/159 (44%), Gaps = 22/159 (13%)
Frame = +2
Query: 2 FLEFNTQXXXXXXXXXXXXSQPSRS-----------------PAGPHLPPPSEPEQDSAA 130
FLEFNTQ SQP+RS P+ PPP P D++
Sbjct: 34 FLEFNTQGDDFDYPDFRELSQPARSAPPTSAPGVPGSAGSPSPSSSSWPPPPPPPPDASQ 93
Query: 131 SELHAPEPTLSPSASTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSELNFEE-----T 295
AP +P AS+ ++ L+FEE
Sbjct: 94 DPDLAPREATTPPASSS------SPSPRASAKARASAAAADGLASGVAALSFEEPLGAGA 147
Query: 296 GDEGYEFGEGNLTEHACRYCGVQDPGCVVRCNVPTCRKW 412
G++GY++G+G+ EHACRYCG+ +P CV RCNVP+CRKW
Sbjct: 148 GEDGYDYGKGDFVEHACRYCGIHNPACVARCNVPSCRKW 186
>gb|EMJ11627.1| hypothetical protein PRUPE_ppa000334mg [Prunus persica]
Length = 1276
Score = 89.4 bits (220), Expect = 5e-16
Identities = 37/49 (75%), Positives = 43/49 (87%), Gaps = 1/49 (2%)
Frame = +2
Query: 269 MSELNFEETGDE-GYEFGEGNLTEHACRYCGVQDPGCVVRCNVPTCRKW 412
MS LNFE+TGD+ YE+G+GN TEHACRYCGV +P CVVRCNVP+CRKW
Sbjct: 112 MSVLNFEDTGDDDNYEYGKGNFTEHACRYCGVSNPACVVRCNVPSCRKW 160
>ref|XP_002329539.1| predicted protein [Populus trichocarpa]
gi|566161589|ref|XP_006385597.1| RNA helicase family
protein [Populus trichocarpa]
gi|550342726|gb|ERP63394.1| RNA helicase family protein
[Populus trichocarpa]
Length = 1242
Score = 89.4 bits (220), Expect = 5e-16
Identities = 37/46 (80%), Positives = 42/46 (91%), Gaps = 1/46 (2%)
Frame = +2
Query: 278 LNFEETGDE-GYEFGEGNLTEHACRYCGVQDPGCVVRCNVPTCRKW 412
LNFEETGD+ GYEFG+G+ TEHACRYCGV +P CVVRCNVP+CRKW
Sbjct: 115 LNFEETGDDDGYEFGKGDFTEHACRYCGVSNPACVVRCNVPSCRKW 160
>ref|XP_002326699.1| predicted protein [Populus trichocarpa]
gi|566146937|ref|XP_006368472.1| RNA helicase family
protein [Populus trichocarpa]
gi|550346386|gb|ERP65041.1| RNA helicase family protein
[Populus trichocarpa]
Length = 1256
Score = 89.4 bits (220), Expect = 5e-16
Identities = 37/49 (75%), Positives = 43/49 (87%), Gaps = 1/49 (2%)
Frame = +2
Query: 269 MSELNFEETGDE-GYEFGEGNLTEHACRYCGVQDPGCVVRCNVPTCRKW 412
M LNFEETGD+ GY+FG+G+ TEHACRYCGV +P CVVRCNVP+CRKW
Sbjct: 107 MGGLNFEETGDDDGYDFGKGDFTEHACRYCGVSNPACVVRCNVPSCRKW 155
>ref|XP_004300289.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Fragaria
vesca subsp. vesca]
Length = 1277
Score = 88.6 bits (218), Expect = 8e-16
Identities = 37/49 (75%), Positives = 43/49 (87%), Gaps = 1/49 (2%)
Frame = +2
Query: 269 MSELNFEETGDE-GYEFGEGNLTEHACRYCGVQDPGCVVRCNVPTCRKW 412
MS LNFE+TGD+ YEFG+G+ TEHACRYCGV +P CVVRCNVP+CRKW
Sbjct: 116 MSVLNFEDTGDDDSYEFGKGDFTEHACRYCGVSNPACVVRCNVPSCRKW 164
>ref|XP_004163978.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Cucumis
sativus]
Length = 1268
Score = 88.2 bits (217), Expect = 1e-15
Identities = 37/49 (75%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Frame = +2
Query: 269 MSELNFEETGDE-GYEFGEGNLTEHACRYCGVQDPGCVVRCNVPTCRKW 412
MS L FE+TGD+ YEFG+GN TEHACRYCGV +P CVVRCNVP+CRKW
Sbjct: 108 MSGLTFEDTGDDDNYEFGKGNFTEHACRYCGVSNPACVVRCNVPSCRKW 156
>ref|XP_006590595.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Glycine
max]
Length = 1268
Score = 87.4 bits (215), Expect = 2e-15
Identities = 36/49 (73%), Positives = 43/49 (87%), Gaps = 1/49 (2%)
Frame = +2
Query: 269 MSELNFEETGDE-GYEFGEGNLTEHACRYCGVQDPGCVVRCNVPTCRKW 412
MS LNFE+TGD+ YE+G+G+ TEHACRYCGV +P CVVRCNVP+CRKW
Sbjct: 111 MSGLNFEDTGDDDNYEYGKGDFTEHACRYCGVSNPACVVRCNVPSCRKW 159
>gb|ESW28609.1| hypothetical protein PHAVU_002G003300g [Phaseolus vulgaris]
Length = 1268
Score = 87.4 bits (215), Expect = 2e-15
Identities = 36/49 (73%), Positives = 43/49 (87%), Gaps = 1/49 (2%)
Frame = +2
Query: 269 MSELNFEETGDE-GYEFGEGNLTEHACRYCGVQDPGCVVRCNVPTCRKW 412
MS LNFE+TGD+ YE+G+G+ TEHACRYCGV +P CVVRCNVP+CRKW
Sbjct: 110 MSGLNFEDTGDDDNYEYGKGDFTEHACRYCGVSNPACVVRCNVPSCRKW 158
>gb|ESW28608.1| hypothetical protein PHAVU_002G003300g [Phaseolus vulgaris]
Length = 1248
Score = 87.4 bits (215), Expect = 2e-15
Identities = 36/49 (73%), Positives = 43/49 (87%), Gaps = 1/49 (2%)
Frame = +2
Query: 269 MSELNFEETGDE-GYEFGEGNLTEHACRYCGVQDPGCVVRCNVPTCRKW 412
MS LNFE+TGD+ YE+G+G+ TEHACRYCGV +P CVVRCNVP+CRKW
Sbjct: 110 MSGLNFEDTGDDDNYEYGKGDFTEHACRYCGVSNPACVVRCNVPSCRKW 158
>ref|XP_003517385.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Glycine
max]
Length = 1266
Score = 87.4 bits (215), Expect = 2e-15
Identities = 36/49 (73%), Positives = 43/49 (87%), Gaps = 1/49 (2%)
Frame = +2
Query: 269 MSELNFEETGDE-GYEFGEGNLTEHACRYCGVQDPGCVVRCNVPTCRKW 412
MS LNFE+TGD+ YE+G+G+ TEHACRYCGV +P CVVRCNVP+CRKW
Sbjct: 108 MSGLNFEDTGDDDNYEYGKGDFTEHACRYCGVSNPACVVRCNVPSCRKW 156
>ref|XP_004150168.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts 1
homolog [Cucumis sativus]
Length = 1246
Score = 86.7 bits (213), Expect = 3e-15
Identities = 36/49 (73%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Frame = +2
Query: 269 MSELNFEETGDE-GYEFGEGNLTEHACRYCGVQDPGCVVRCNVPTCRKW 412
MS L F++TGD+ YEFG+GN TEHACRYCGV +P CVVRCNVP+CRKW
Sbjct: 108 MSGLTFKDTGDDDNYEFGKGNFTEHACRYCGVSNPACVVRCNVPSCRKW 156