BLASTX nr result

ID: Zingiber23_contig00017487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00017487
         (208 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003570649.1| PREDICTED: F-box/kelch-repeat protein SKIP11...    66   4e-09
ref|XP_006647892.1| PREDICTED: F-box/kelch-repeat protein At1g74...    64   2e-08
ref|XP_004953915.1| PREDICTED: F-box/kelch-repeat protein At1g74...    64   2e-08
dbj|BAD16457.1| kelch repeat-containing F-box-like [Oryza sativa...    63   4e-08
ref|NP_001168670.1| hypothetical protein [Zea mays] gi|223944871...    63   5e-08
gb|EXB49960.1| F-box/kelch-repeat protein SKIP11 [Morus notabilis]     57   3e-06
gb|EMJ10316.1| hypothetical protein PRUPE_ppa005415mg [Prunus pe...    56   6e-06

>ref|XP_003570649.1| PREDICTED: F-box/kelch-repeat protein SKIP11-like [Brachypodium
           distachyon]
          Length = 427

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 35/66 (53%), Positives = 49/66 (74%), Gaps = 4/66 (6%)
 Frame = +2

Query: 20  MLESESCLISRALPSSCEEESKWAYMTFNLLEITTNKRPQ---LVEPSGLSQDA-AVKKP 187
           MLE +SCLISR+LP+S E+ES+ AYMT++LLEIT  KRP     +E  G++  A + K+P
Sbjct: 1   MLEGQSCLISRSLPTSSEQESRLAYMTYHLLEITRTKRPSGVLAIEQDGIAVVAVSAKRP 60

Query: 188 KYEDQS 205
           K ED++
Sbjct: 61  KSEDKN 66


>ref|XP_006647892.1| PREDICTED: F-box/kelch-repeat protein At1g74510-like [Oryza
           brachyantha]
          Length = 426

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 33/67 (49%), Positives = 46/67 (68%), Gaps = 4/67 (5%)
 Frame = +2

Query: 20  MLESESCLISRALPSSCEEESKWAYMTFNLLEITTNKR----PQLVEPSGLSQDAAVKKP 187
           MLE +SCLISR+LPSSC++ES+ AYMT++LLEIT +KR    P++ + S  +     K+P
Sbjct: 1   MLEGQSCLISRSLPSSCDQESRLAYMTYHLLEITRSKRVSGAPRIEQDSFAAVAGLTKRP 60

Query: 188 KYEDQSE 208
           K     E
Sbjct: 61  KSAKNQE 67


>ref|XP_004953915.1| PREDICTED: F-box/kelch-repeat protein At1g74510-like [Setaria
           italica]
          Length = 425

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 29/39 (74%), Positives = 36/39 (92%)
 Frame = +2

Query: 20  MLESESCLISRALPSSCEEESKWAYMTFNLLEITTNKRP 136
           MLE +SCLISR+LPSSCE+ES+ AYMT++LLEIT +KRP
Sbjct: 1   MLEGQSCLISRSLPSSCEQESRLAYMTYHLLEITRSKRP 39


>dbj|BAD16457.1| kelch repeat-containing F-box-like [Oryza sativa Japonica Group]
          Length = 426

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 33/61 (54%), Positives = 46/61 (75%), Gaps = 4/61 (6%)
 Frame = +2

Query: 20  MLESESCLISRALPSSCEEESKWAYMTFNLLEITTNKR---PQLVEPSGLSQDAAV-KKP 187
           MLE +SCLISR+LPSSC++ES+ AYMT++LLEIT +KR      +EP  ++  A + K+P
Sbjct: 1   MLEGQSCLISRSLPSSCDQESRLAYMTYHLLEITRSKRISSTPRIEPDSVAAVAVLTKRP 60

Query: 188 K 190
           K
Sbjct: 61  K 61


>ref|NP_001168670.1| hypothetical protein [Zea mays] gi|223944871|gb|ACN26519.1| unknown
           [Zea mays] gi|223950089|gb|ACN29128.1| unknown [Zea
           mays] gi|224030281|gb|ACN34216.1| unknown [Zea mays]
           gi|413924555|gb|AFW64487.1| hypothetical protein
           ZEAMMB73_909642 [Zea mays] gi|413924556|gb|AFW64488.1|
           hypothetical protein ZEAMMB73_909642 [Zea mays]
           gi|413924557|gb|AFW64489.1| hypothetical protein
           ZEAMMB73_909642 [Zea mays] gi|413924558|gb|AFW64490.1|
           hypothetical protein ZEAMMB73_909642 [Zea mays]
          Length = 423

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 28/39 (71%), Positives = 35/39 (89%)
 Frame = +2

Query: 20  MLESESCLISRALPSSCEEESKWAYMTFNLLEITTNKRP 136
           MLE +SCLISR+LP SCE+ES+ AYMT++LLEIT +KRP
Sbjct: 1   MLEDQSCLISRSLPGSCEQESRLAYMTYHLLEITRSKRP 39


>gb|EXB49960.1| F-box/kelch-repeat protein SKIP11 [Morus notabilis]
          Length = 498

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/38 (65%), Positives = 31/38 (81%)
 Frame = +2

Query: 20  MLESESCLISRALPSSCEEESKWAYMTFNLLEITTNKR 133
           MLE  S L+SR LPSSCE+ESKW Y TF L+E+++NKR
Sbjct: 1   MLEGPSYLVSRDLPSSCEQESKWIYNTFRLIELSSNKR 38


>gb|EMJ10316.1| hypothetical protein PRUPE_ppa005415mg [Prunus persica]
          Length = 462

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/40 (60%), Positives = 31/40 (77%)
 Frame = +2

Query: 17  DMLESESCLISRALPSSCEEESKWAYMTFNLLEITTNKRP 136
           +MLE  S L+SR LPSSCE+ESKW Y T  ++E++ NKRP
Sbjct: 19  NMLEGPSYLVSRELPSSCEQESKWIYNTHRVMELSNNKRP 58


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