BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00017467
         (1908 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40014.3| unnamed protein product [Vitis vinifera]              505   e-140
ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-...   505   e-140
ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-...   490   e-136
ref|XP_006878613.1| hypothetical protein AMTR_s00011p00258380 [A...   488   e-135
ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-...   481   e-133
gb|EOY10370.1| RNApolymerase sigma subunit 2 [Theobroma cacao]        481   e-133
ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citr...   479   e-132
ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-...   477   e-132
gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]     476   e-131
ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-...   475   e-131
ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative ...   474   e-131
ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-...   473   e-130
ref|XP_006577887.1| PREDICTED: RNA polymerase sigma factor sigB-...   470   e-130
ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-...   467   e-129
ref|XP_002319746.2| SIGMA FACTOR B family protein [Populus trich...   467   e-129
gb|EMJ05079.1| hypothetical protein PRUPE_ppa006657mg [Prunus pe...   461   e-127
emb|CAD20831.2| sigma factor [Spinacia oleracea]                      458   e-126
ref|XP_006417677.1| hypothetical protein EUTSA_v10007187mg [Eutr...   457   e-126
ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Caps...   457   e-126
ref|XP_002325455.2| hypothetical protein POPTR_0019s06100g [Popu...   453   e-124

>emb|CBI40014.3| unnamed protein product [Vitis vinifera]
          Length = 575

 Score =  505 bits (1300), Expect = e-140
 Identities = 284/550 (51%), Positives = 354/550 (64%), Gaps = 14/550 (2%)
 Frame = +2

Query: 188  KARDFVHLQIHCLLSPT--------TSVIDFGQIDKLEARSTSSPSCVIKPLTYVGAVGP 343
            K R+ ++ ++ C LS T        T+V+D  ++      S S+     +P TY+G VGP
Sbjct: 26   KNREAIYFRVQCALSTTSPPLSTSTTAVLDIEKLRLPSLESHSNSVAAHRPWTYIGVVGP 85

Query: 344  PTKTGIQMTLASDKLLSDXXXXXXXXXXXXXXXXXXXXXXXXXXXKMMGMNPFVEVENLE 523
            PT+   + TLA + LL+                            +++G N   + E   
Sbjct: 86   PTEANFEATLARETLLTSEEAVIAAAAAEAVALAKAAVKVAKDAARLVGKNNSAKSETKP 145

Query: 524  SS--SDAEIKWLERMSLIGTE-LGGTNHFADAETEYPQANFSPDQFLHTDCFSFTYSESQ 694
            +S  S  +     R+    TE +G       AET     N   D    +D    T  E +
Sbjct: 146  ASFLSGDDTSQFRRIQFTETERIGILGDSVGAETGMVDYNSLQDVTEDSDDLEPTLEELE 205

Query: 695  I--TEHAESIAVGSVXXXXXXXXXXXXXXXXXXGVTSLKSGLSGRKKR-SMQEVDYSDPX 865
            +   E ++SI V S                   GV S++SG + R+KR S+QEVDYSDP 
Sbjct: 206  LLEAEFSKSIVVRSNRQVERKARRARAAEKASAGVVSVRSGSTSRRKRVSLQEVDYSDPL 265

Query: 866  XXXXXXXXXXXXXXAAEEIRLSEGIQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDRK 1045
                          A EE+ LSEGIQDLLKLE+L+E L ER G +PTFAQWAAAAGVD+K
Sbjct: 266  RYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQWAAAAGVDQK 325

Query: 1046 SLRKRLTLGTFSKDKMIKSNIRLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDASK 1225
            +LR+R   G   KDKMIKSNIRLVISIAKNY G G+NIQDLVQEGCRGLVRGAEKFDASK
Sbjct: 326  TLRRRTNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLVRGAEKFDASK 385

Query: 1226 GFKFSTYAHWWIKQSVRKFLSEHSRTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEEV 1405
            GFKFSTYAHWWIKQ+VRK LS+ SRTIRLP+HMVEA+YRV+EA K+L+ ENGRHP  EEV
Sbjct: 386  GFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEV 445

Query: 1406 AVATGLSMKKLEAVMLTPKAPISLDQKIGFNESLKPTDVIAHPDAETSEDMLIKQFMRQD 1585
            A ATGLSMK+L AV+LTPKAP SLDQKIG N++LKP++VIA PDAET+E++LIKQFMR+D
Sbjct: 446  AEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVIADPDAETAEELLIKQFMRED 505

Query: 1586 LNKVLDTLNPKEKQVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQIEXXXXXXXXXXXX 1765
            L KVL++LNP+EKQV+RWR+GLEDGR KTLQEIGELMGVSRER+RQIE            
Sbjct: 506  LEKVLNSLNPREKQVIRWRYGLEDGRTKTLQEIGELMGVSRERIRQIESCAFRKLKNKRR 565

Query: 1766 TNNLRRYIVT 1795
            T +L++Y+V+
Sbjct: 566  TKHLQQYLVS 575


>ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
          Length = 578

 Score =  505 bits (1300), Expect = e-140
 Identities = 284/550 (51%), Positives = 354/550 (64%), Gaps = 14/550 (2%)
 Frame = +2

Query: 188  KARDFVHLQIHCLLSPT--------TSVIDFGQIDKLEARSTSSPSCVIKPLTYVGAVGP 343
            K R+ ++ ++ C LS T        T+V+D  ++      S S+     +P TY+G VGP
Sbjct: 29   KNREAIYFRVQCALSTTSPPLSTSTTAVLDIEKLRLPSLESHSNSVAAHRPWTYIGVVGP 88

Query: 344  PTKTGIQMTLASDKLLSDXXXXXXXXXXXXXXXXXXXXXXXXXXXKMMGMNPFVEVENLE 523
            PT+   + TLA + LL+                            +++G N   + E   
Sbjct: 89   PTEANFEATLARETLLTSEEAVIAAAAAEAVALAKAAVKVAKDAARLVGKNNSAKSETKP 148

Query: 524  SS--SDAEIKWLERMSLIGTE-LGGTNHFADAETEYPQANFSPDQFLHTDCFSFTYSESQ 694
            +S  S  +     R+    TE +G       AET     N   D    +D    T  E +
Sbjct: 149  ASFLSGDDTSQFRRIQFTETERIGILGDSVGAETGMVDYNSLQDVTEDSDDLEPTLEELE 208

Query: 695  I--TEHAESIAVGSVXXXXXXXXXXXXXXXXXXGVTSLKSGLSGRKKR-SMQEVDYSDPX 865
            +   E ++SI V S                   GV S++SG + R+KR S+QEVDYSDP 
Sbjct: 209  LLEAEFSKSIVVRSNRQVERKARRARAAEKASAGVVSVRSGSTSRRKRVSLQEVDYSDPL 268

Query: 866  XXXXXXXXXXXXXXAAEEIRLSEGIQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDRK 1045
                          A EE+ LSEGIQDLLKLE+L+E L ER G +PTFAQWAAAAGVD+K
Sbjct: 269  RYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQWAAAAGVDQK 328

Query: 1046 SLRKRLTLGTFSKDKMIKSNIRLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDASK 1225
            +LR+R   G   KDKMIKSNIRLVISIAKNY G G+NIQDLVQEGCRGLVRGAEKFDASK
Sbjct: 329  TLRRRTNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLVRGAEKFDASK 388

Query: 1226 GFKFSTYAHWWIKQSVRKFLSEHSRTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEEV 1405
            GFKFSTYAHWWIKQ+VRK LS+ SRTIRLP+HMVEA+YRV+EA K+L+ ENGRHP  EEV
Sbjct: 389  GFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEV 448

Query: 1406 AVATGLSMKKLEAVMLTPKAPISLDQKIGFNESLKPTDVIAHPDAETSEDMLIKQFMRQD 1585
            A ATGLSMK+L AV+LTPKAP SLDQKIG N++LKP++VIA PDAET+E++LIKQFMR+D
Sbjct: 449  AEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVIADPDAETAEELLIKQFMRED 508

Query: 1586 LNKVLDTLNPKEKQVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQIEXXXXXXXXXXXX 1765
            L KVL++LNP+EKQV+RWR+GLEDGR KTLQEIGELMGVSRER+RQIE            
Sbjct: 509  LEKVLNSLNPREKQVIRWRYGLEDGRTKTLQEIGELMGVSRERIRQIESCAFRKLKNKRR 568

Query: 1766 TNNLRRYIVT 1795
            T +L++Y+V+
Sbjct: 569  TKHLQQYLVS 578


>ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-like [Fragaria vesca
            subsp. vesca]
          Length = 616

 Score =  490 bits (1262), Expect = e-136
 Identities = 271/534 (50%), Positives = 343/534 (64%), Gaps = 8/534 (1%)
 Frame = +2

Query: 218  HCLLSPTTSVIDFGQIDKLEARSTSSPSCVIKPLTYVGAVGPPTKTGIQMTLASDKLLSD 397
            H   +PT +++D  +         S    V +P TY GA+GPPT+      LA++ LL+ 
Sbjct: 86   HSTSTPTATLLDMEEFSLPSLTVNSDSLIVNRPWTYTGAIGPPTEANYGAALATETLLTS 145

Query: 398  XXXXXXXXXXXXXXXXXXXXXXXXXXXKMMGMNPFVEVENLE----SSSDAEIKWLERMS 565
                                        ++  N + +VEN       +S   I W + + 
Sbjct: 146  EEAVIAAAAAEAVTLAKAALKVAKDVALLVSNNHYAKVENSSPVSCGTSAFHINWAQHLE 205

Query: 566  LIGTELGGTNHFADA---ETEYPQANFSPDQFLHTDCFSFTYSESQITEHAESIAVGSVX 736
               T   G +  ++    E  + Q   +  + +      F   + Q++     IA  S  
Sbjct: 206  TEPTLRIGDSMASETALVEDHFLQIAINESENVEPANEEFELLQEQLSN---GIAARSSR 262

Query: 737  XXXXXXXXXXXXXXXXXGVTSLKSGLSGRKKR-SMQEVDYSDPXXXXXXXXXXXXXXXAA 913
                              + S+KSG + RKKR S+Q+VD+SDP               A 
Sbjct: 263  QTERKARRTRAAEKAAASIVSVKSGSTSRKKRASLQDVDHSDPLRYLRATTHTSRLLTAN 322

Query: 914  EEIRLSEGIQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDRKSLRKRLTLGTFSKDKM 1093
            EEI LSEGIQ+LLKLE+L+E LA+R G QPTFAQWAAAAGVD+K+LRKR+  G   KDKM
Sbjct: 323  EEIELSEGIQELLKLEKLQEDLAQRCGTQPTFAQWAAAAGVDQKTLRKRVNYGIMCKDKM 382

Query: 1094 IKSNIRLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQSV 1273
            IKSNIRLVISIAKNY G G+N+QDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQ+V
Sbjct: 383  IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 442

Query: 1274 RKFLSEHSRTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEEVAVATGLSMKKLEAVML 1453
            RK LS+ SRTIRLP+HMVEA+YRVREA+K+L+  NGRHP  EEVA ATGLSMK+L AV+L
Sbjct: 443  RKSLSDQSRTIRLPFHMVEATYRVREAKKQLYSVNGRHPNDEEVAEATGLSMKRLAAVLL 502

Query: 1454 TPKAPISLDQKIGFNESLKPTDVIAHPDAETSEDMLIKQFMRQDLNKVLDTLNPKEKQVV 1633
            TPKAP SL+QKIG N++LKP+DVIA PDAET+ED+L+K+FM+QDL KVLD+LNP+EKQV+
Sbjct: 503  TPKAPRSLEQKIGINQNLKPSDVIADPDAETAEDLLMKKFMKQDLEKVLDSLNPREKQVI 562

Query: 1634 RWRFGLEDGRMKTLQEIGELMGVSRERVRQIEXXXXXXXXXXXXTNNLRRYIVT 1795
            RWRFG+EDGRMKTLQEIGELMGVSRER+RQIE            T +L++Y+++
Sbjct: 563  RWRFGMEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVLS 616


>ref|XP_006878613.1| hypothetical protein AMTR_s00011p00258380 [Amborella trichopoda]
            gi|548831956|gb|ERM94758.1| hypothetical protein
            AMTR_s00011p00258380 [Amborella trichopoda]
          Length = 570

 Score =  488 bits (1257), Expect = e-135
 Identities = 276/547 (50%), Positives = 348/547 (63%), Gaps = 11/547 (2%)
 Frame = +2

Query: 188  KARDFVHLQIHCLLSPTTSVIDFGQIDKLEARSTSSPSCVIK---PLTYVGAVGPPTKTG 358
            + R+    Q  C+ S  T V+D   +DK+   S    S  +    PLTYVG +G   KT 
Sbjct: 27   RTREATCFQTQCVSSTATVVVD---VDKVRVPSLGGHSTSVSTHGPLTYVGTIGSQKKTD 83

Query: 359  IQMTLASDKLLSDXXXXXXXXXXXXXXXXXXXXXXXXXXXKMMGMNPFVEVENLES-SSD 535
             +  L ++ LL                              M+G  P    + ++   S+
Sbjct: 84   FEAALVTESLLKSEEAIIAAAAAEAIALAKAAAKLAKDAALMVGSVPPSRSDKVDDFPSE 143

Query: 536  AEIKWLER-----MSLIGTELGGTNHFADAETEYPQAN-FSPDQFLHTDCFSFTYSESQI 697
            A+I  L+R     M  IG+  G +        ++   N  SP++              Q+
Sbjct: 144  ADILRLQRARLTEMERIGSMDGSSIAGIGPRDKHKSVNQLSPNEMADKQSRENILEALQL 203

Query: 698  TEHAESIAVGSVXXXXXXXXXXXXXXXXXXGVTSLKSGLSGRKKRS-MQEVDYSDPXXXX 874
             +H++ +AV S                      ++K G + R+KR+ +QE+DYSDP    
Sbjct: 204  -QHSQRVAVRSRRQTERRARRAKGVEKAAANAITVKLGTTSRRKRAPLQEIDYSDPLRYL 262

Query: 875  XXXXXXXXXXXAAEEIRLSEGIQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDRKSLR 1054
                       A EE+ LSEGIQDLLKLE+L + L ER G +PTF QWAAAAG+D+K+LR
Sbjct: 263  RGTTNSTKLLTATEELELSEGIQDLLKLEKLHKELTERFGGEPTFVQWAAAAGIDQKALR 322

Query: 1055 KRLTLGTFSKDKMIKSNIRLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDASKGFK 1234
            +RL+ GT  KDKMIKSNIRLVISIAKNY G GL+IQDLVQEGCRGLVRGAEKFDASKGFK
Sbjct: 323  RRLSYGTHCKDKMIKSNIRLVISIAKNYQGVGLSIQDLVQEGCRGLVRGAEKFDASKGFK 382

Query: 1235 FSTYAHWWIKQSVRKFLSEHSRTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEEVAVA 1414
            FSTYAHWWIKQ+VRK LS+ SRTIRLP+HMV+A+YRVREA K+L+ ENGRHP  EEVA A
Sbjct: 383  FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVDATYRVREATKQLYSENGRHPNDEEVAEA 442

Query: 1415 TGLSMKKLEAVMLTPKAPISLDQKIGFNESLKPTDVIAHPDAETSEDMLIKQFMRQDLNK 1594
            TGLSMK+L  V+LTPKAP SLDQKIG N++LKP++VI+ P+AET+ED+L+KQFM+QDL K
Sbjct: 443  TGLSMKRLTTVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETAEDLLMKQFMKQDLEK 502

Query: 1595 VLDTLNPKEKQVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQIEXXXXXXXXXXXXTNN 1774
            VL+TLNP+EKQVVRWRFGLEDGRMKTLQEIGELMGVSRER+RQIE            T N
Sbjct: 503  VLNTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKKRTKN 562

Query: 1775 LRRYIVT 1795
            LR+Y+++
Sbjct: 563  LRQYLLS 569


>ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Citrus
            sinensis]
          Length = 605

 Score =  481 bits (1239), Expect = e-133
 Identities = 280/556 (50%), Positives = 354/556 (63%), Gaps = 20/556 (3%)
 Frame = +2

Query: 188  KARDFVHLQIHCLLSPT--------TSVIDFGQIDKLEARSTSSPSCVIKPLTYVGAVGP 343
            K+++ +  + HC+LS T        T+V+D  ++      + S+     +  TY GAVGP
Sbjct: 57   KSKEPICFRTHCVLSTTSPSTSTAMTTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGP 116

Query: 344  PTKTGIQMTLASDKLLSDXXXXXXXXXXXXXXXXXXXXXXXXXXXKMMGMN-------PF 502
             T+  +  +LA++ L SD                            +   N       P 
Sbjct: 117  STEENLGTSLATETLTSDEAVIAAASAEAVALARAAVKVAKDAALMVNHHNSAKPKSKPA 176

Query: 503  VEVE-NLESSSDAEIKWLERMSLIGTELGGTNHFADAETEYPQANFSPDQFLHTDC-FSF 676
            + +  +  +S  A++   ER S+IG  +       +A    P+  +S  Q L+       
Sbjct: 177  ISLSADTNTSMWAQLTERERASIIGDSV-----IVEAA---PEEEYSEQQPLNKSADLEP 228

Query: 677  TYSESQITEH--AESIAVGSVXXXXXXXXXXXXXXXXXXGVTSLKSGLSGRKKR-SMQEV 847
            T+ E ++ E   ++SIAV S                    V S+KSG + R+KR S+QEV
Sbjct: 229  THEELKLLEEQVSQSIAVRSRRQTERKARRTRAAEKAAANVMSVKSGSTSRRKRPSVQEV 288

Query: 848  DYSDPXXXXXXXXXXXXXXXAAEEIRLSEGIQDLLKLERLKETLAERHGCQPTFAQWAAA 1027
            DYSDP               A EE++LS GIQDLLKLE L+E L+ER G  PTFAQWAAA
Sbjct: 289  DYSDPLRYLRATTSSSRLLTANEEMQLSAGIQDLLKLEGLREVLSERCGGSPTFAQWAAA 348

Query: 1028 AGVDRKSLRKRLTLGTFSKDKMIKSNIRLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAE 1207
            AGVD++ LR+RL  G   KDKMI SNIRLVISIAKNY G G+N+QDLVQEGCRGLVRGAE
Sbjct: 349  AGVDQRELRRRLNYGILCKDKMITSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAE 408

Query: 1208 KFDASKGFKFSTYAHWWIKQSVRKFLSEHSRTIRLPYHMVEASYRVREAEKRLHRENGRH 1387
            KFDASKGFKFSTYAHWWIKQ+VRK LS+ SRTIRLP+HMVEA+YRV+EA K+L+ ENGRH
Sbjct: 409  KFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRH 468

Query: 1388 PGTEEVAVATGLSMKKLEAVMLTPKAPISLDQKIGFNESLKPTDVIAHPDAETSEDMLIK 1567
            P  EEVA ATGLSMK+L AV+LTPKAP SLDQK G N++LKP++VIA P+AET+ED+LIK
Sbjct: 469  PNNEEVAEATGLSMKRLHAVLLTPKAPRSLDQKFGINQNLKPSEVIADPEAETAEDLLIK 528

Query: 1568 QFMRQDLNKVLDTLNPKEKQVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQIEXXXXXX 1747
            +FM++DL KVLDTLNP+E+QVVRWRFGLEDGRMKTLQEIGELMGVSRER+RQIE      
Sbjct: 529  KFMKEDLEKVLDTLNPRERQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRK 588

Query: 1748 XXXXXXTNNLRRYIVT 1795
                  T +L +Y +T
Sbjct: 589  LKNKKRTKHLMQYAIT 604


>gb|EOY10370.1| RNApolymerase sigma subunit 2 [Theobroma cacao]
          Length = 623

 Score =  481 bits (1238), Expect = e-133
 Identities = 280/558 (50%), Positives = 348/558 (62%), Gaps = 22/558 (3%)
 Frame = +2

Query: 188  KARDFVHLQIHCLLSPTTSVIDFGQIDKLEARSTSSPS--------CVIKPLTYVGAVGP 343
            K ++ +  +  C+LS T+S         L+      PS         V +P TY+GA GP
Sbjct: 64   KHKEHICFRTQCVLSTTSSSTSTTATAVLDVEKLRLPSFEAHPNSVAVDRPWTYIGATGP 123

Query: 344  PTKTGIQMTLASDKLLSDXXXXXXXXXXXXXXXXXXXXXXXXXXXKMMGMNPFVEVENLE 523
            P++  +  TLA+D LL+                             M     + + E   
Sbjct: 124  PSEASLGATLATDNLLTSDEAVIAAAAAEAVALARAAVKVAKDAALMAENYNYAKTEMKS 183

Query: 524  SSSDAEIKWLERMSLIGTELGGTNHFADA---ETEYPQANFSPDQFLHTDCFSFTYSESQ 694
              S A   +  + +L  TE        D+   E+E  + +   +    +D    T  E +
Sbjct: 184  GVSFATDSFTSKWALF-TEAERAGIIGDSPTDESEMEEDDSEQNSTTESDELEPTNEELE 242

Query: 695  ITEH--AESIAVGSVXXXXXXXXXXXXXXXXXXGVTSLKSGLSGRKKR-SMQEVDYSDPX 865
              E   + SIAV S                    V S+KSG + RK+R ++Q+VDYSDP 
Sbjct: 243  HLEEQLSRSIAVRSRRQTERKAKRTRAAEKAAANVVSVKSGSTNRKRRGALQDVDYSDPL 302

Query: 866  XXXXXXXXXXXXXXAAEEIRLSEGIQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDRK 1045
                          A EE+ LSEGIQDLLKLERL+E LAER G QPTFAQWAAAAGVD+K
Sbjct: 303  RYLRGTTSTSRLLTANEELELSEGIQDLLKLERLQEELAERCGGQPTFAQWAAAAGVDQK 362

Query: 1046 SLRKRLTLGTFSKDKMIKSNIRLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDASK 1225
            +LR RL  G   KDKMIKSNIRLVISIAKNY G G+N+QDLVQEGCRGLVRGAEKFDASK
Sbjct: 363  TLRSRLNYGVHCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASK 422

Query: 1226 GFKFSTYAHWWIKQSVRKFLSEHSRTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEEV 1405
            GFKFSTYAHWWIKQ+VRK LS+ SRTIRLP+HMVEA+YRV+EA K+L+ ENGRHP  EEV
Sbjct: 423  GFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDNEEV 482

Query: 1406 AVATGLSMKKLEAVMLTPKAPISLDQKIGFNESLKPT--------DVIAHPDAETSEDML 1561
            A ATGLSMK+L AV+LTPKAP SLDQKIG N++LKP+        +VIA P+AET+EDML
Sbjct: 483  AEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSVCPVSSLAEVIADPEAETAEDML 542

Query: 1562 IKQFMRQDLNKVLDTLNPKEKQVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQIEXXXX 1741
            IKQFMR+DL KVLD+L+ +E+QV+RWRFG+EDGRMKTLQEIGELMGVSRER+RQIE    
Sbjct: 543  IKQFMRKDLEKVLDSLSQRERQVIRWRFGMEDGRMKTLQEIGELMGVSRERIRQIESCAF 602

Query: 1742 XXXXXXXXTNNLRRYIVT 1795
                    T +L++Y+++
Sbjct: 603  RKLKNKKRTKHLQQYLLS 620


>ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citrus clementina]
            gi|557539534|gb|ESR50578.1| hypothetical protein
            CICLE_v10030998mg [Citrus clementina]
          Length = 605

 Score =  479 bits (1232), Expect = e-132
 Identities = 279/556 (50%), Positives = 353/556 (63%), Gaps = 20/556 (3%)
 Frame = +2

Query: 188  KARDFVHLQIHCLLSPT--------TSVIDFGQIDKLEARSTSSPSCVIKPLTYVGAVGP 343
            K+++ +  + HC+LS T        T+V+D  ++      + S+     +  TY GAVGP
Sbjct: 57   KSKEPICFRTHCVLSTTSPSTSTAMTTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGP 116

Query: 344  PTKTGIQMTLASDKLLSDXXXXXXXXXXXXXXXXXXXXXXXXXXXKMMGMN-------PF 502
             T+  +  +LA++ L SD                            +   N       P 
Sbjct: 117  STEENLGTSLATETLTSDEAVIAAASAEAVALARAAVKVAKDAALMVNHHNSAKPKSKPA 176

Query: 503  VEVE-NLESSSDAEIKWLERMSLIGTELGGTNHFADAETEYPQANFSPDQFLHTDC-FSF 676
            + +  +  +S  A++   ER S+IG  +       +A    P+  +S  Q L+       
Sbjct: 177  ISLSADTSTSMWAQLTERERASIIGDSV-----IVEAA---PEEEYSEQQPLNKSADLEP 228

Query: 677  TYSESQITEH--AESIAVGSVXXXXXXXXXXXXXXXXXXGVTSLKSGLSGRKKR-SMQEV 847
            T+ E ++ E   ++SIAV S                    V S+KSG + R+KR S+QEV
Sbjct: 229  THEELKLLEEQVSQSIAVRSRRQTERKARRTRAAEKAAANVMSVKSGSTTRRKRPSVQEV 288

Query: 848  DYSDPXXXXXXXXXXXXXXXAAEEIRLSEGIQDLLKLERLKETLAERHGCQPTFAQWAAA 1027
            DYSDP               A EE++LS GIQDLLKLE L+E L+ER G  PTFAQWAAA
Sbjct: 289  DYSDPLRYLRATTSSSRLLTANEEMQLSAGIQDLLKLEGLREVLSERCGGSPTFAQWAAA 348

Query: 1028 AGVDRKSLRKRLTLGTFSKDKMIKSNIRLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAE 1207
            AGVD++ LR+RL  G   KDKMI SNIRLVISIAKNY G G+N+QDLVQEGCRGLVRGAE
Sbjct: 349  AGVDQRELRRRLNYGILCKDKMITSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAE 408

Query: 1208 KFDASKGFKFSTYAHWWIKQSVRKFLSEHSRTIRLPYHMVEASYRVREAEKRLHRENGRH 1387
            KFDASKGFKFSTYAHWWIKQ+VRK LS+ SRTIRLP+HMVEA+YRV+EA K+L+ ENGRH
Sbjct: 409  KFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRH 468

Query: 1388 PGTEEVAVATGLSMKKLEAVMLTPKAPISLDQKIGFNESLKPTDVIAHPDAETSEDMLIK 1567
            P  EEVA ATGLSMK+L AV+L PKAP SLDQK G N++LKP++VIA P+AET+ED+LIK
Sbjct: 469  PNNEEVAKATGLSMKRLHAVLLAPKAPRSLDQKFGINQNLKPSEVIADPEAETAEDLLIK 528

Query: 1568 QFMRQDLNKVLDTLNPKEKQVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQIEXXXXXX 1747
            +FM++DL KVLDTLNP+E+QVVRWRFGLEDGRMKTLQEIGELMGVSRER+RQIE      
Sbjct: 529  KFMKEDLEKVLDTLNPRERQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRK 588

Query: 1748 XXXXXXTNNLRRYIVT 1795
                  T +L +Y +T
Sbjct: 589  LKNKKRTKHLMQYAIT 604


>ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum
            lycopersicum]
          Length = 613

 Score =  477 bits (1228), Expect = e-132
 Identities = 289/585 (49%), Positives = 349/585 (59%), Gaps = 51/585 (8%)
 Frame = +2

Query: 188  KARDFVHLQIHCLLSPTTSVIDFGQ-----IDKLEA-------------RSTSSPSCVI- 310
            K+RD +HL+  C+LS T++V          I+KL+              RS  SPS    
Sbjct: 31   KSRDSIHLRTQCILSTTSAVTSTATSTVLGIEKLQLPSIEILSNSVAAERSWKSPSAATT 90

Query: 311  -----------------------KPLTYVGAVGPPTKTGIQMTLASDKLLSDXXXXXXXX 421
                                   +P TY GAVGPP +     T   D L S+        
Sbjct: 91   TVPGIQKLKLPSFEANPDSVAPDRPWTYTGAVGPPAEAN---TKPEDSLASEEAIVAAAA 147

Query: 422  XXXXXXXXXXXXXXXXXXXKMMGMNPFVEVENLESSSDAEIKWLERMSLIGTELGGTN-- 595
                                ++G N   + +N+   + +E +     S+   + G T   
Sbjct: 148  AEAVALAKAALKGAQDAVM-LVGYNNLKDSDNVGRGTLSEARTAPFESVHLAQPGETRGV 206

Query: 596  ----HFADAETEYPQANFSPDQFLHTDCFSFTYSESQITEHAES--IAVGSVXXXXXXXX 757
                    +E ++  ++   D    +D    ++ E +I +   S  IAV S         
Sbjct: 207  GVCAELNGSEMKWTGSSLFRDTLTDSDDLEPSHEELEILQSQLSNVIAVKSNRQTERKAR 266

Query: 758  XXXXXXXXXXGVTSLKSGLSGRKKR-SMQEVDYSDPXXXXXXXXXXXXXXXAAEEIRLSE 934
                       V S+KSG + RKKR S+Q+VDYSDP               A+EE  LS 
Sbjct: 267  RAKAVERAAANVVSVKSGSTSRKKRASVQDVDYSDPLRYLRGTTCSSRLLTASEEQELSR 326

Query: 935  GIQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDRKSLRKRLTLGTFSKDKMIKSNIRL 1114
            GIQDLLKLERL+  L ER G QPTF QWAAAAGVD+ +LRKRL  G   KDKMIKSN+RL
Sbjct: 327  GIQDLLKLERLQVELTERCGGQPTFTQWAAAAGVDQMTLRKRLNYGILCKDKMIKSNVRL 386

Query: 1115 VISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQSVRKFLSEH 1294
            VISIAKNY G G+N+QDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQ+VRK LS+ 
Sbjct: 387  VISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQ 446

Query: 1295 SRTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEEVAVATGLSMKKLEAVMLTPKAPIS 1474
            SRTIRLP+HMVEA+YRV+EA K+L  ENGRHP   EVA ATGLSMK+L AVMLTPKAP S
Sbjct: 447  SRTIRLPFHMVEATYRVKEARKQLLTENGRHPNDAEVAEATGLSMKRLAAVMLTPKAPRS 506

Query: 1475 LDQKIGFNESLKPTDVIAHPDAETSEDMLIKQFMRQDLNKVLDTLNPKEKQVVRWRFGLE 1654
            LDQK+GFNESLKP++V+A PDAETSE++L KQFMRQDL KVLDTLNP+EKQVVRWRFGLE
Sbjct: 507  LDQKVGFNESLKPSEVLADPDAETSEEILTKQFMRQDLEKVLDTLNPREKQVVRWRFGLE 566

Query: 1655 DGRMKTLQEIGELMGVSRERVRQIEXXXXXXXXXXXXTNNLRRYI 1789
            DGRMKTLQEIGELMGVSRER+RQIE            T  L++YI
Sbjct: 567  DGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKFLQQYI 611


>gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 574

 Score =  476 bits (1226), Expect = e-131
 Identities = 276/547 (50%), Positives = 348/547 (63%), Gaps = 11/547 (2%)
 Frame = +2

Query: 188  KARDFVHLQIHCLLSPTTSVIDFG-----QIDKLEARSTSSPSCVI---KPLTYVGAVGP 343
            KARD   L   C+LS T+     G      ++KL   S  + S  +   +P TY GA GP
Sbjct: 35   KARDINSLA-QCVLSTTSPSTSVGATYVLSVEKLRFPSLDANSESVTSNRPWTYTGATGP 93

Query: 344  PTKTGIQMTLASDKLLSDXXXXXXXXXXXXXXXXXXXXXXXXXXXKMMGMNPFVEVENLE 523
            P +   + TLA++ LL+                             ++  +   E  +L 
Sbjct: 94   PVEANFEATLATETLLTSEEAVIAAAAAEAVTLAKAAVKVAKDAALLVRPSTRAESISLV 153

Query: 524  SSSDAEIKWLERMSLIGTELGGTNHFADAETEYPQANFSPDQFLHTDCFSFTYSESQITE 703
            SS    IK  +  S +   L        AE    + +   D    ++    T  E +I +
Sbjct: 154  SSEARNIKTAQAASRVRDSLR-------AEMALIEDHPPKDAAKESNDLQPTNEELRILQ 206

Query: 704  H--AESIAVGSVXXXXXXXXXXXXXXXXXXGVTSLKSGLSGRKKR-SMQEVDYSDPXXXX 874
               ++SIAV S                    V ++KSG + RKKR S+Q+VD+SDP    
Sbjct: 207  EQLSKSIAVRSRRQSERKAKRDRAAEKAAANVVAVKSGSNSRKKRASVQDVDHSDPLRYL 266

Query: 875  XXXXXXXXXXXAAEEIRLSEGIQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDRKSLR 1054
                       A EEI LSEGIQDLLKLE+L+E LAER G  PTFAQWAAAAGVD+K+LR
Sbjct: 267  RSTTSTSRLLTATEEIELSEGIQDLLKLEKLQEELAERCGGPPTFAQWAAAAGVDQKTLR 326

Query: 1055 KRLTLGTFSKDKMIKSNIRLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDASKGFK 1234
            +R+  G   KDKMIKSN+RLVISIAKNY G G+N+QDLVQEGCRGLVRGAEKFDASKGFK
Sbjct: 327  RRINYGILCKDKMIKSNVRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK 386

Query: 1235 FSTYAHWWIKQSVRKFLSEHSRTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEEVAVA 1414
            FSTYAHWWIKQ+VRK LS+ SRTIRLP+HMVEA+YRV+EA K+L+ ENGR P  EEVA A
Sbjct: 387  FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPNDEEVAEA 446

Query: 1415 TGLSMKKLEAVMLTPKAPISLDQKIGFNESLKPTDVIAHPDAETSEDMLIKQFMRQDLNK 1594
            TGLSMK+L AV+LTPKAP SL+QKIG N++LKP+++IA PDAET ED+L +QFM+QDL+K
Sbjct: 447  TGLSMKRLAAVLLTPKAPRSLEQKIGINQNLKPSEIIADPDAETLEDVLTRQFMKQDLDK 506

Query: 1595 VLDTLNPKEKQVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQIEXXXXXXXXXXXXTNN 1774
            VLD+LN +EKQV+RWRFG++DGRMKTLQEIGELMGVSRER+RQIE            T +
Sbjct: 507  VLDSLNQREKQVIRWRFGMDDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKH 566

Query: 1775 LRRYIVT 1795
            L++Y+++
Sbjct: 567  LQQYLIS 573


>ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X2 [Citrus
            sinensis]
          Length = 525

 Score =  475 bits (1222), Expect = e-131
 Identities = 274/531 (51%), Positives = 342/531 (64%), Gaps = 12/531 (2%)
 Frame = +2

Query: 239  TSVIDFGQIDKLEARSTSSPSCVIKPLTYVGAVGPPTKTGIQMTLASDKLLSDXXXXXXX 418
            T+V+D  ++      + S+     +  TY GAVGP T+  +  +LA++ L SD       
Sbjct: 2    TTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETLTSDEAVIAAA 61

Query: 419  XXXXXXXXXXXXXXXXXXXXKMMGMN-------PFVEVE-NLESSSDAEIKWLERMSLIG 574
                                 +   N       P + +  +  +S  A++   ER S+IG
Sbjct: 62   SAEAVALARAAVKVAKDAALMVNHHNSAKPKSKPAISLSADTNTSMWAQLTERERASIIG 121

Query: 575  TELGGTNHFADAETEYPQANFSPDQFLHTDC-FSFTYSESQITEH--AESIAVGSVXXXX 745
              +       +A    P+  +S  Q L+       T+ E ++ E   ++SIAV S     
Sbjct: 122  DSV-----IVEAA---PEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTE 173

Query: 746  XXXXXXXXXXXXXXGVTSLKSGLSGRKKR-SMQEVDYSDPXXXXXXXXXXXXXXXAAEEI 922
                           V S+KSG + R+KR S+QEVDYSDP               A EE+
Sbjct: 174  RKARRTRAAEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEM 233

Query: 923  RLSEGIQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDRKSLRKRLTLGTFSKDKMIKS 1102
            +LS GIQDLLKLE L+E L+ER G  PTFAQWAAAAGVD++ LR+RL  G   KDKMI S
Sbjct: 234  QLSAGIQDLLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITS 293

Query: 1103 NIRLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQSVRKF 1282
            NIRLVISIAKNY G G+N+QDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQ+VRK 
Sbjct: 294  NIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKS 353

Query: 1283 LSEHSRTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEEVAVATGLSMKKLEAVMLTPK 1462
            LS+ SRTIRLP+HMVEA+YRV+EA K+L+ ENGRHP  EEVA ATGLSMK+L AV+LTPK
Sbjct: 354  LSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLTPK 413

Query: 1463 APISLDQKIGFNESLKPTDVIAHPDAETSEDMLIKQFMRQDLNKVLDTLNPKEKQVVRWR 1642
            AP SLDQK G N++LKP++VIA P+AET+ED+LIK+FM++DL KVLDTLNP+E+QVVRWR
Sbjct: 414  APRSLDQKFGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWR 473

Query: 1643 FGLEDGRMKTLQEIGELMGVSRERVRQIEXXXXXXXXXXXXTNNLRRYIVT 1795
            FGLEDGRMKTLQEIGELMGVSRER+RQIE            T +L +Y +T
Sbjct: 474  FGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKKRTKHLMQYAIT 524


>ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative [Ricinus communis]
            gi|223536699|gb|EEF38340.1| RNA polymerase sigma factor
            rpoD1, putative [Ricinus communis]
          Length = 569

 Score =  474 bits (1221), Expect = e-131
 Identities = 275/550 (50%), Positives = 347/550 (63%), Gaps = 15/550 (2%)
 Frame = +2

Query: 188  KARDFVHLQIHCLLSPT-----TSVIDFGQIDKLEARSTSSPSCVIKPLTYVGAVGPPTK 352
            K+R+ ++ +  C+LS T     T+V+D   ++KL   S  +PS  I P +      P T 
Sbjct: 35   KSREPIYYRAQCILSTTSPSTSTAVLD---LEKLRLPSFEAPSDSIAPNS------PWTY 85

Query: 353  TGIQMTLASDKLLSDXXXXXXXXXXXXXXXXXXXXXXXXXXXKMMGMNPFVEVEN----- 517
                 TLA++ L++                             ++   P  E E+     
Sbjct: 86   ATFGSTLATETLITSDEAVIAAAAAEAVALARAAVKVAKDAALLVKNFPSAETESKLTSP 145

Query: 518  --LESSSDAEIKWLERMSLIGTELGGTNHFADAETEYPQANFSPDQFLHTDCFSFTYSES 691
              +++S   +    ER  +IG  +         ET   + +        +D    T+ E 
Sbjct: 146  STIDASRWPQFTETERARIIGDSVA-------TETGPREESSMQSSIKESDYLELTHKEL 198

Query: 692  QITEH--AESIAVGSVXXXXXXXXXXXXXXXXXXGVTSLKSGLSGRKKR-SMQEVDYSDP 862
            ++ +   +E IAV S                    V S+K G + +KKR S+QEVDYSDP
Sbjct: 199  ELLQKQLSEGIAVRSRRQTERKARRARAVEKAASSVVSVKPGSTSKKKRGSLQEVDYSDP 258

Query: 863  XXXXXXXXXXXXXXXAAEEIRLSEGIQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDR 1042
                           A+EE+ LS  IQDLLKLERL+E LAER+G QPTFAQWAAAAGVD+
Sbjct: 259  LRYLRGTTSTSRLLTASEELELSAAIQDLLKLERLQEELAERYGGQPTFAQWAAAAGVDQ 318

Query: 1043 KSLRKRLTLGTFSKDKMIKSNIRLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDAS 1222
            ++LRKR+  GT  KDKMIKSNIRLVISIAKNY G G+N+QDLVQEGCRGLVRGAEKFDAS
Sbjct: 319  RTLRKRINHGTICKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDAS 378

Query: 1223 KGFKFSTYAHWWIKQSVRKFLSEHSRTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEE 1402
            KGFKFSTYAHWWIKQ+VRK LS+ SRTIRLP+HMVEA+YRV+EA K+L+ ENGRHP  EE
Sbjct: 379  KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEE 438

Query: 1403 VAVATGLSMKKLEAVMLTPKAPISLDQKIGFNESLKPTDVIAHPDAETSEDMLIKQFMRQ 1582
            VA A GLSMK+L AV+LTPKAP SLDQKIG N  LKP++VIA P+AET+E++L+KQFM+Q
Sbjct: 439  VAEAAGLSMKRLSAVLLTPKAPRSLDQKIGMNMDLKPSEVIADPEAETAEELLMKQFMKQ 498

Query: 1583 DLNKVLDTLNPKEKQVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQIEXXXXXXXXXXX 1762
            DL KVL+TLNP+E QVVRWRFGLEDGRMKTLQEIGE+MGVSRER+RQIE           
Sbjct: 499  DLEKVLNTLNPRETQVVRWRFGLEDGRMKTLQEIGEIMGVSRERIRQIESSAFRKLKNKK 558

Query: 1763 XTNNLRRYIV 1792
             T  L++Y++
Sbjct: 559  RTKQLKQYLL 568


>ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-like [Cucumis sativus]
            gi|449473951|ref|XP_004154029.1| PREDICTED: RNA
            polymerase sigma factor sigB-like [Cucumis sativus]
          Length = 580

 Score =  473 bits (1218), Expect = e-130
 Identities = 250/415 (60%), Positives = 299/415 (72%), Gaps = 1/415 (0%)
 Frame = +2

Query: 554  ERMSLIGTELGGTNHFADAETEYPQANFSPDQFLHTDCFSFTYSESQITEHAESIAVGSV 733
            ER  +IG  +G      + +   P    S D    ++       E      +ESI V S 
Sbjct: 171  ERADIIGEPVGVNKRPMEGDALEPSTTESDDMEPTSEELELLQDEL-----SESITVKSK 225

Query: 734  XXXXXXXXXXXXXXXXXXGVTSLKSGLSGRKKR-SMQEVDYSDPXXXXXXXXXXXXXXXA 910
                               V S KSG S RKKR S+QEVDYSDP               A
Sbjct: 226  RQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTA 285

Query: 911  AEEIRLSEGIQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDRKSLRKRLTLGTFSKDK 1090
             EE+ LSEGIQDLLKLERL+E L ER+G +PTFAQWAAAAGV++++LRKRL  GT  KDK
Sbjct: 286  TEELELSEGIQDLLKLERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDK 345

Query: 1091 MIKSNIRLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQS 1270
            MIKSNIRLVISIAKNY G G+N+QDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQ+
Sbjct: 346  MIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQA 405

Query: 1271 VRKFLSEHSRTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEEVAVATGLSMKKLEAVM 1450
            VRKFLS+ SRTIRLP+HMVEA+YRV+EA K+L  ENGRHP  +E+A A GLSMK+L AV+
Sbjct: 406  VRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVL 465

Query: 1451 LTPKAPISLDQKIGFNESLKPTDVIAHPDAETSEDMLIKQFMRQDLNKVLDTLNPKEKQV 1630
            +TPKAP SL+QKIG N++LKP++VI+ P+AET EDMLIKQFM+QDL KVLD+LNP+EKQV
Sbjct: 466  MTPKAPRSLEQKIGINQNLKPSEVISDPEAETCEDMLIKQFMKQDLEKVLDSLNPREKQV 525

Query: 1631 VRWRFGLEDGRMKTLQEIGELMGVSRERVRQIEXXXXXXXXXXXXTNNLRRYIVT 1795
            +RWRFG+EDGRMKTLQEIGE+MGVSRER+RQIE            T +L++Y+++
Sbjct: 526  IRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMS 580


>ref|XP_006577887.1| PREDICTED: RNA polymerase sigma factor sigB-like [Glycine max]
          Length = 564

 Score =  470 bits (1210), Expect = e-130
 Identities = 267/541 (49%), Positives = 340/541 (62%), Gaps = 5/541 (0%)
 Frame = +2

Query: 188  KARDFVHLQIHCLLSPTTSVIDFGQIDKLEARSTSSPSCVIKPLTYVGAVGPPTKTGIQM 367
            K R  +  Q  C+LS T+         KL   + S P+       Y+ AV PP +   + 
Sbjct: 28   KTRPNLCFQPQCVLSATSPSTLLSLEKKLALDAPSDPNT---SWPYIAAVSPPLQANFKS 84

Query: 368  TLASDKLLSDXXXXXXXXXXXXXXXXXXXXXXXXXXXKMMGMNPFVEVENLE----SSSD 535
            TL+++ LL++                            ++   P  E E        S D
Sbjct: 85   TLSAESLLTNEEAVIVAAASEALALAKAAAKVAKDAALLVKKKPPAEAEYKSHVSSKSDD 144

Query: 536  AEIKWLERMSLIGTELGGTNHFADAETEYPQANFSPDQFLHTDCFSFTYSESQITEHAES 715
              +KW ++M  +   +   +  A AE      + SP +       S    E    + ++S
Sbjct: 145  LLLKWFKQMEEVEDGVAEESMGAGAEI-MEGVDVSPSEEESDLEPSHEELERLQEQLSDS 203

Query: 716  IAVGSVXXXXXXXXXXXXXXXXXXGVTSLKSGLSGRKKR-SMQEVDYSDPXXXXXXXXXX 892
            IAV S                     TS K G S R+KR SMQEVDYSDP          
Sbjct: 204  IAVRSRRQTERKAKRVRATEKATTNFTSFKPGSSSRRKRVSMQEVDYSDPLRYLRTTTSA 263

Query: 893  XXXXXAAEEIRLSEGIQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDRKSLRKRLTLG 1072
                   EEI+LS GIQDLLKLE+++E LAER G QPTFAQWAA AGVD+K+LRKRL  G
Sbjct: 264  SRLLTPTEEIKLSAGIQDLLKLEKIQEDLAERFGSQPTFAQWAAVAGVDQKTLRKRLNYG 323

Query: 1073 TFSKDKMIKSNIRLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH 1252
             F KDKMIKSNIRLVISIAKNY G+G+N+QDLVQEGCRGLV+GAEKFD +KGFKFSTYAH
Sbjct: 324  IFCKDKMIKSNIRLVISIAKNYQGSGMNLQDLVQEGCRGLVKGAEKFDGTKGFKFSTYAH 383

Query: 1253 WWIKQSVRKFLSEHSRTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEEVAVATGLSMK 1432
            WWIKQ+VRK LS+ SRTIRLP+HMVEA+YRV+EA K+L+ ENGR P  EEVA ATGLSMK
Sbjct: 384  WWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDDEEVAEATGLSMK 443

Query: 1433 KLEAVMLTPKAPISLDQKIGFNESLKPTDVIAHPDAETSEDMLIKQFMRQDLNKVLDTLN 1612
            +L AV++TPKAP SL+QKIG N++LKP++VI+ PDAET+E+ L+KQFM++DL + LD+LN
Sbjct: 444  RLNAVLMTPKAPRSLEQKIGINQNLKPSEVISDPDAETAEEQLLKQFMKKDLEEALDSLN 503

Query: 1613 PKEKQVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQIEXXXXXXXXXXXXTNNLRRYIV 1792
            P+E+QVVRWRFG++DGR KTLQEIGE++GVSRER+RQIE            TN+L++Y+V
Sbjct: 504  PRERQVVRWRFGMDDGRTKTLQEIGEMLGVSRERIRQIESSAFKKLKNKKRTNHLQQYLV 563

Query: 1793 T 1795
            +
Sbjct: 564  S 564


>ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum tuberosum]
          Length = 613

 Score =  467 bits (1202), Expect = e-129
 Identities = 285/587 (48%), Positives = 350/587 (59%), Gaps = 53/587 (9%)
 Frame = +2

Query: 188  KARDFVHLQIHCLLSPTTSVIDFGQ-----IDKLEA-------------RSTSSPSCVI- 310
            K+RD +HL+  C+LS T++V          I+KL+              RS  SPS    
Sbjct: 31   KSRDHIHLRTQCILSTTSAVTSTATSTVLGIEKLQLPSIEILSNSVAAERSWKSPSAATT 90

Query: 311  -----------------------KPLTYVGAVGPPTK--TGIQMTLASDKLLSDXXXXXX 415
                                   +P TY GAVGPP +  T  + +LAS++ +        
Sbjct: 91   TVPDIQKLKLPSFEANPDSVAPDRPWTYTGAVGPPAEANTKPENSLASEEAI------VA 144

Query: 416  XXXXXXXXXXXXXXXXXXXXXKMMGMNPFVEVENLESSSDAEIKWLERMSLIGTELGGTN 595
                                  ++G N   + +N+   + +E +     S+   + G T 
Sbjct: 145  AAAAEAVALAKAALKGAQDAVMLVGYNNLNDSDNVGRGTLSEARTAPFESVHLAQPGETR 204

Query: 596  HFA------DAETEYPQANFSPDQFLHTDCFSFTYSESQITEHAES--IAVGSVXXXXXX 751
                      +E ++  ++   +    +D    +  E +I +   S  IAV S       
Sbjct: 205  RVGVCAELNGSEMKWTGSSLFRETLTDSDDLEPSPEELEILQSQLSNVIAVKSNRQTERK 264

Query: 752  XXXXXXXXXXXXGVTSLKSGLSGRKKR-SMQEVDYSDPXXXXXXXXXXXXXXXAAEEIRL 928
                         V ++KSG + RKKR S+Q+VDYSDP               A+EE  L
Sbjct: 265  AKRAKSVEKAAANVVTVKSGSTSRKKRASVQDVDYSDPLRYLRGTTCSSRLLTASEEQEL 324

Query: 929  SEGIQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDRKSLRKRLTLGTFSKDKMIKSNI 1108
            S GIQDLLKLERL+  L ER G QPTF QWAAAAGVD+ +LRKRL  G   KDKMIKSN+
Sbjct: 325  SRGIQDLLKLERLQVELTERCGGQPTFTQWAAAAGVDQMTLRKRLNYGILCKDKMIKSNV 384

Query: 1109 RLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQSVRKFLS 1288
            RLVISIAKNY G G+N+QDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQ+VRK LS
Sbjct: 385  RLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLS 444

Query: 1289 EHSRTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEEVAVATGLSMKKLEAVMLTPKAP 1468
            + SR IRLP+HMVEA+YRV+EA K+L  ENGRHP   EVA A GLSMK+L AVMLTPKAP
Sbjct: 445  DQSRMIRLPFHMVEATYRVKEARKQLLTENGRHPNDAEVAEAAGLSMKRLAAVMLTPKAP 504

Query: 1469 ISLDQKIGFNESLKPTDVIAHPDAETSEDMLIKQFMRQDLNKVLDTLNPKEKQVVRWRFG 1648
             SLDQKIGFNESLKP++V+A P+AETSE++L KQFMRQDL KVLDTLNP+EKQVVRWRFG
Sbjct: 505  RSLDQKIGFNESLKPSEVLADPEAETSEEILTKQFMRQDLEKVLDTLNPREKQVVRWRFG 564

Query: 1649 LEDGRMKTLQEIGELMGVSRERVRQIEXXXXXXXXXXXXTNNLRRYI 1789
            LEDGRMKTLQEIGELMGVSRER+RQIE            T  L++YI
Sbjct: 565  LEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKFLQQYI 611


>ref|XP_002319746.2| SIGMA FACTOR B family protein [Populus trichocarpa]
            gi|550325142|gb|EEE95669.2| SIGMA FACTOR B family protein
            [Populus trichocarpa]
          Length = 567

 Score =  467 bits (1201), Expect = e-129
 Identities = 269/546 (49%), Positives = 341/546 (62%), Gaps = 17/546 (3%)
 Frame = +2

Query: 206  HLQI-HCLLS---PTTSVIDFGQIDKLEARSTSSPSCVIKPLTYVGAVGPPTKTGIQMTL 373
            H Q+  C+LS   P+T+V+D  ++        S      +P TY+G +GP  K     +L
Sbjct: 29   HTQLPQCVLSSASPSTAVLDLEKLRLPSLEPHSDSISANRPWTYIGGIGPQKKPPFGTSL 88

Query: 374  ASDKLLSDXXXXXXXXXXXXXXXXXXXXXXXXXXXKMMGMNPFVEVEN---LESSSDA-E 541
            A++ L+++                           +M     F++ E    + S++D+  
Sbjct: 89   AAETLIANDEAVIAAAAAEAVALARAAVKVAKDAAEMAKNYSFMKKETKIPIASTTDSFS 148

Query: 542  IKWL-----ERMSLIGTELGGTNHFADA-ETEYPQANFSPDQFLHTDCFSFTYSESQITE 703
              W      ER  +IG  +       +    +YP   +        DC   T  E  + +
Sbjct: 149  SMWSLLTEKERADIIGDSVSAETRLREEYSVQYPTEEY--------DCLEPTQEELALLQ 200

Query: 704  H--AESIAVGSVXXXXXXXXXXXXXXXXXXGVTSLKSGLSGRKKR-SMQEVDYSDPXXXX 874
               +E IAV S                    V S+KSG + +KKR  +QEVD SDP    
Sbjct: 201  KQLSEGIAVRSKRQTERKARRARAAEKAAANVVSVKSGSTSKKKRVPLQEVDQSDPLRFF 260

Query: 875  XXXXXXXXXXXAAEEIRLSEGIQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDRKSLR 1054
                       A EE+ LSEGIQDLLKLER++E L ER G +P+FAQWAAAAGVD+ +LR
Sbjct: 261  RGASSSSRLLSATEEVELSEGIQDLLKLERIEEELKERFGGEPSFAQWAAAAGVDQLTLR 320

Query: 1055 KRLTLGTFSKDKMIKSNIRLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDASKGFK 1234
            KRL  G   KDKMIKSN+RLVISIAKNY GTG+N+QDLVQEGCRGLVRGAEKFDASKGFK
Sbjct: 321  KRLNYGILCKDKMIKSNVRLVISIAKNYQGTGMNLQDLVQEGCRGLVRGAEKFDASKGFK 380

Query: 1235 FSTYAHWWIKQSVRKFLSEHSRTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEEVAVA 1414
            FSTYAHWWIKQ+VRK LS+ SRTIRLP+HMV+A+YRV+EA K+L+ ENGRHP  +EVA A
Sbjct: 381  FSTYAHWWIKQAVRKSLSDRSRTIRLPFHMVDATYRVKEARKQLYSENGRHPDDKEVAEA 440

Query: 1415 TGLSMKKLEAVMLTPKAPISLDQKIGFNESLKPTDVIAHPDAETSEDMLIKQFMRQDLNK 1594
             GLSMK+L AV+LTPKAP SLDQK+GFN  LK ++V A P+AET+ED+L+K+FM++DL K
Sbjct: 441  AGLSMKRLSAVLLTPKAPRSLDQKMGFNMDLKLSEVTADPEAETAEDLLMKEFMKKDLAK 500

Query: 1595 VLDTLNPKEKQVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQIEXXXXXXXXXXXXTNN 1774
            VL +L+P+E QVVRWRFG+EDGRMKTLQEIGELMGVSRERVRQIE            T  
Sbjct: 501  VLGSLSPRENQVVRWRFGMEDGRMKTLQEIGELMGVSRERVRQIELSAFRKLKNKNRTKQ 560

Query: 1775 LRRYIV 1792
            LR+Y+V
Sbjct: 561  LRQYMV 566


>gb|EMJ05079.1| hypothetical protein PRUPE_ppa006657mg [Prunus persica]
          Length = 401

 Score =  461 bits (1187), Expect = e-127
 Identities = 235/336 (69%), Positives = 277/336 (82%), Gaps = 1/336 (0%)
 Frame = +2

Query: 791  VTSLKSGLSGRKKR-SMQEVDYSDPXXXXXXXXXXXXXXXAAEEIRLSEGIQDLLKLERL 967
            V S+KSG + RKKR S+Q+VD+SDP               A EEI LSEGIQ+LLKLE+L
Sbjct: 66   VVSVKSGSTSRKKRASLQDVDHSDPLRYLRATTHTSRLLTANEEIELSEGIQELLKLEKL 125

Query: 968  KETLAERHGCQPTFAQWAAAAGVDRKSLRKRLTLGTFSKDKMIKSNIRLVISIAKNYLGT 1147
            +E L +R G QPT AQWAAAAGVD+K+LRKR+  G   KDKMIKSNIRLVISIAKNY G 
Sbjct: 126  QEELVQRCGGQPTIAQWAAAAGVDQKTLRKRINYGILCKDKMIKSNIRLVISIAKNYQGA 185

Query: 1148 GLNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQSVRKFLSEHSRTIRLPYHMV 1327
            G+N+QDLVQ+GCRGLVRGAEKFDASKGFKFSTYAHWWIKQ+VRK LS+ SRTIRLP+HMV
Sbjct: 186  GMNLQDLVQQGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMV 245

Query: 1328 EASYRVREAEKRLHRENGRHPGTEEVAVATGLSMKKLEAVMLTPKAPISLDQKIGFNESL 1507
            EA+YRVREA+K+L+  NGRHP  EEVA ATGLSMK+L AV+LTPKAP SL+QKIG N++L
Sbjct: 246  EATYRVREAKKQLYSVNGRHPNDEEVAEATGLSMKRLAAVLLTPKAPRSLEQKIGINQNL 305

Query: 1508 KPTDVIAHPDAETSEDMLIKQFMRQDLNKVLDTLNPKEKQVVRWRFGLEDGRMKTLQEIG 1687
            KP++VIA P+AET+EDML+K+FM+QDL KVLD+LN +EKQVVRWRFGLEDGRMKTLQEIG
Sbjct: 306  KPSEVIADPEAETAEDMLMKKFMKQDLEKVLDSLNAREKQVVRWRFGLEDGRMKTLQEIG 365

Query: 1688 ELMGVSRERVRQIEXXXXXXXXXXXXTNNLRRYIVT 1795
            ELMGVSRER+RQIE            T +L++Y+V+
Sbjct: 366  ELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVVS 401


>emb|CAD20831.2| sigma factor [Spinacia oleracea]
          Length = 575

 Score =  458 bits (1179), Expect = e-126
 Identities = 272/549 (49%), Positives = 334/549 (60%), Gaps = 17/549 (3%)
 Frame = +2

Query: 194  RDFVHLQIHCLLS----PT----TSVIDFGQIDKLEARSTSSPSCVIKPLTYVGAVGPPT 349
            RD V  +  C +S    PT    TS+ D  ++      S S+        T++  +G P 
Sbjct: 37   RDLVCFRPQCAVSTPPPPTAAAETSIFDVEKLRLPYVESNSNSLSAFAQSTFLSTLGSPA 96

Query: 350  KTGIQMTLASDKLLSDXXXXXXXXXXXXXXXXXXXXXXXXXXXKMMGMN--PFVEVENLE 523
            +      L + KLL +                            +M  N  P   V  LE
Sbjct: 97   EVKFDTALTA-KLLIENEEAVIAAAAAEAVALARAAAKLAKDAALMAFNSQPTKPVSKLE 155

Query: 524  SSS----DAEIKWLERMSLIGTELGGTNHFADAETEYPQANFSPDQFLHTDCFSFTYSES 691
              S     A++   E++  +    G  N   + +T    A+  P           T  E 
Sbjct: 156  GQSLHFSGAQLLENEQVGSMRNFEGSENSLREGDTVSEPADMEP-----------TIEEL 204

Query: 692  QITEHA--ESIAVGSVXXXXXXXXXXXXXXXXXXGVTSLKSGLSGRKKR-SMQEVDYSDP 862
            Q+ E    ESI V S                    V S+K G + RKKR S+QEVDYSDP
Sbjct: 205  QLLEVELDESITVRSTRQGERKARRARAAEKVASNVVSVKVGSNSRKKRTSVQEVDYSDP 264

Query: 863  XXXXXXXXXXXXXXXAAEEIRLSEGIQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDR 1042
                           ++EE  LS GIQDLLKLE+L + L  R G  P+F QWAAAAG+D+
Sbjct: 265  LRYLRGATNSSRLLTSSEETELSAGIQDLLKLEKLHDELKVRFGKSPSFVQWAAAAGIDQ 324

Query: 1043 KSLRKRLTLGTFSKDKMIKSNIRLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDAS 1222
            ++LR+RL  GTF KDKMIKSN+RLVISIAKNY G+G+N+QDLVQEGCRGLVRGAEKFDAS
Sbjct: 325  RTLRRRLNHGTFCKDKMIKSNVRLVISIAKNYQGSGMNLQDLVQEGCRGLVRGAEKFDAS 384

Query: 1223 KGFKFSTYAHWWIKQSVRKFLSEHSRTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEE 1402
            KGFKFSTYAHWWIKQ+VRK LS+ SRTIRLP+HMVEA+YRV+EA K+L  ENG+ P  EE
Sbjct: 385  KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGKQPNNEE 444

Query: 1403 VAVATGLSMKKLEAVMLTPKAPISLDQKIGFNESLKPTDVIAHPDAETSEDMLIKQFMRQ 1582
            VA ATGLSMK+L AV++TPKAP SLDQKIGFN +LKP++VIA P+AET+ED+L KQFMRQ
Sbjct: 445  VAEATGLSMKRLTAVLMTPKAPRSLDQKIGFNMNLKPSEVIADPEAETAEDLLTKQFMRQ 504

Query: 1583 DLNKVLDTLNPKEKQVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQIEXXXXXXXXXXX 1762
            DL KVLDTL+ +EKQV+RWRFGLEDGRMKTLQEIGELMGVSRER+RQIE           
Sbjct: 505  DLEKVLDTLSSREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLQNKK 564

Query: 1763 XTNNLRRYI 1789
             T NL++Y+
Sbjct: 565  KTINLQQYM 573


>ref|XP_006417677.1| hypothetical protein EUTSA_v10007187mg [Eutrema salsugineum]
            gi|557095448|gb|ESQ36030.1| hypothetical protein
            EUTSA_v10007187mg [Eutrema salsugineum]
          Length = 579

 Score =  457 bits (1176), Expect = e-126
 Identities = 275/550 (50%), Positives = 343/550 (62%), Gaps = 20/550 (3%)
 Frame = +2

Query: 203  VHLQIHCLLSPT----TSVIDFGQIDKLEARSTSSPSCVI-KPLTYVGAVGPPTKTGIQM 367
            V  Q  C +S +    TS++D  ++ +L +  T S S +  +  TY G VGP T+     
Sbjct: 34   VFFQPQCAVSTSPPLLTSMLDVAKL-RLPSFDTDSDSRISDRQWTYTGTVGPSTEAKYLE 92

Query: 368  TLASDKLLSDXXXXXXXXXXXXXXXXXXXXXXXXXXXKMMGMNPFVEVENLESSSDAEIK 547
             LAS+ LL+                                 N +     + S++D   K
Sbjct: 93   ALASETLLTSDEAVVAAAAAEAVALARAAVKVAKDATSFR--NSYNTKVVVSSAADKRSK 150

Query: 548  W-----LERMSLIG----TELGGTNHFADAETEYPQANFSPDQFLHTDCFSFTYSESQIT 700
            W      ER  ++G    ++ G  +  + A    P    +PD   + +      SE Q  
Sbjct: 151  WDQFTEKERAGILGHLAVSDTGVVSDKSTAPAPAPAPAPAPD--CNNESSGDLKSEKQEV 208

Query: 701  EHAE-----SIAVGSVXXXXXXXXXXXXXXXXXXGVTSLKSGLSGRKKRS-MQEVDYSDP 862
            E  E     S AV S                    + S+K+G S RKKR+  QEVD++DP
Sbjct: 209  ELLEEQLSVSSAVRSTRQTERKARRAKGLEKTASSMQSVKTGSSSRKKRAPSQEVDHNDP 268

Query: 863  XXXXXXXXXXXXXXXAAEEIRLSEGIQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDR 1042
                           A EE  LSEGIQDLLKLERL+  L ER G QPTFAQWA+AAGVD+
Sbjct: 269  LRYLRMTTSSSKLLTAREEQELSEGIQDLLKLERLQAELTERCGHQPTFAQWASAAGVDQ 328

Query: 1043 KSLRKRLTLGTFSKDKMIKSNIRLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDAS 1222
            KSLRKR+  GT  KD+MIKSNIRLVISIAKNY G G+N+QDLVQEGCRGLVRGAEKFDA+
Sbjct: 329  KSLRKRINYGTQCKDRMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDAT 388

Query: 1223 KGFKFSTYAHWWIKQSVRKFLSEHSRTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEE 1402
            KGFKFSTYAHWWIKQ+VRK LS+ SR IRLP+HMVEA+YRV+EA K+L+ E G+ P  EE
Sbjct: 389  KGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGKQPENEE 448

Query: 1403 VAVATGLSMKKLEAVMLTPKAPISLDQKIGFNESLKPTDVIAHPDAETSEDMLIKQFMRQ 1582
            VA ATGLSMK+L AV+L+PK P SLDQKIG N++LKP++VIA P+AETSED+LIKQFMRQ
Sbjct: 449  VAEATGLSMKRLMAVLLSPKPPRSLDQKIGINQNLKPSEVIADPEAETSEDILIKQFMRQ 508

Query: 1583 DLNKVLDTLNPKEKQVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQIEXXXXXXXXXXX 1762
            DL+KVLD+L+ +EKQV+RWRFG+EDGRMKTLQEIGE MGVSRERVRQIE           
Sbjct: 509  DLDKVLDSLSTREKQVIRWRFGMEDGRMKTLQEIGETMGVSRERVRQIESSAFRKLKNKK 568

Query: 1763 XTNNLRRYIV 1792
             +N+L++Y+V
Sbjct: 569  RSNHLQQYLV 578


>ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Capsella rubella]
            gi|482575837|gb|EOA40024.1| hypothetical protein
            CARUB_v10008711mg [Capsella rubella]
          Length = 571

 Score =  457 bits (1176), Expect = e-126
 Identities = 267/525 (50%), Positives = 330/525 (62%), Gaps = 7/525 (1%)
 Frame = +2

Query: 239  TSVIDFGQIDKLEARSTSSPSCVI-KPLTYVGAVGPPTKTGIQMTLASDKLLSDXXXXXX 415
            TS +D  ++ +L +  T S S +  +  TY G VGP T+      LAS+ LL+       
Sbjct: 50   TSTLDVAKL-RLPSFDTDSDSRISDRQWTYTGTVGPSTEAKYLEALASETLLTSDEAVVA 108

Query: 416  XXXXXXXXXXXXXXXXXXXXXKMMGMNPFVEVENLESSSDAEIKW-----LERMSLIGTE 580
                                      N    +  + S++D   KW      ER  ++G  
Sbjct: 109  AAAAEAVALARAAVKVAKDATLFKNSNNTNLL--ISSTADKRSKWDQFTEKERAGILGHL 166

Query: 581  LGGTNHFADAETEYPQANFSPDQFLHTDCFSFTYSESQITEHAESIAVGSVXXXXXXXXX 760
                      ++  P +N      L ++       E Q    A S+AV S          
Sbjct: 167  AVSDTGIVSDKSTAPASNKESSADLISEIQEVELVEEQ---PAASLAVRSTRQTERKARR 223

Query: 761  XXXXXXXXXGVTSLKSGLSGRKKRSM-QEVDYSDPXXXXXXXXXXXXXXXAAEEIRLSEG 937
                      + S+K+G S RKKR + QEVD++DP                 EE  LS G
Sbjct: 224  AKGLEKSASAIPSVKTGSSPRKKRVVAQEVDHNDPLRYLRVTTSSSKLLTVREEHELSAG 283

Query: 938  IQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDRKSLRKRLTLGTFSKDKMIKSNIRLV 1117
            IQDLLKLERL+  L ER G QPTF+QWA+AAGVD+KSLRKR+  GT  KDKMIKSNIRLV
Sbjct: 284  IQDLLKLERLQAELTERCGRQPTFSQWASAAGVDQKSLRKRINYGTQCKDKMIKSNIRLV 343

Query: 1118 ISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQSVRKFLSEHS 1297
            ISIAKNY G G+N+QDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQ+VRK LS+ S
Sbjct: 344  ISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQS 403

Query: 1298 RTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEEVAVATGLSMKKLEAVMLTPKAPISL 1477
            R IRLP+HMVEA+YRV+EA K+L+ E GRHP  EEVA ATGLSMK+L AV+L+PK P SL
Sbjct: 404  RMIRLPFHMVEATYRVKEARKQLYTEKGRHPENEEVAEATGLSMKRLMAVLLSPKPPRSL 463

Query: 1478 DQKIGFNESLKPTDVIAHPDAETSEDMLIKQFMRQDLNKVLDTLNPKEKQVVRWRFGLED 1657
            DQKIG N++LKP++VIA P+AETSED+LIKQFMR+DL+KVLD+L  +EKQV+RWRFG+ED
Sbjct: 464  DQKIGMNQNLKPSEVIADPEAETSEDILIKQFMREDLDKVLDSLGTREKQVIRWRFGMED 523

Query: 1658 GRMKTLQEIGELMGVSRERVRQIEXXXXXXXXXXXXTNNLRRYIV 1792
            GRMKTLQEIGELMGVSRERVRQIE            +N+L++Y+V
Sbjct: 524  GRMKTLQEIGELMGVSRERVRQIESSAFRKLKNKKRSNHLQQYLV 568


>ref|XP_002325455.2| hypothetical protein POPTR_0019s06100g [Populus trichocarpa]
            gi|550316911|gb|EEE99836.2| hypothetical protein
            POPTR_0019s06100g [Populus trichocarpa]
          Length = 555

 Score =  453 bits (1166), Expect = e-124
 Identities = 256/535 (47%), Positives = 330/535 (61%), Gaps = 13/535 (2%)
 Frame = +2

Query: 230  SPTTSVIDFGQIDKLEARSTSSPSCVIKPLTYVGAVGPPTKTGIQMTLASDKLLSDXXXX 409
            S +T+V++  ++      S S      +P TY+G +GPP +     +LA++ L+ +    
Sbjct: 29   STSTAVLNLEKLRLPSLESHSDSIAANRPWTYIGGIGPPKEPLFGTSLATETLIINDEAV 88

Query: 410  XXXXXXXXXXXXXXXXXXXXXXXKMM----GMNPFVEVENLESSSDAEIKWL-----ERM 562
                                   +M      +N   ++    ++      W      ER 
Sbjct: 89   IAAAAAEAVALARAAVKVAKDAAEMAKNYCSVNTETKIPIASTADSFSSMWCLLTGKERA 148

Query: 563  SLIGTELGG-TNHFADAETEYPQANFSPDQFLHTDCFSFTYSESQITEH--AESIAVGSV 733
             +IG      T    +  T+YP           +DCF  T+ E  + E   +ESI V S 
Sbjct: 149  DIIGVSFSAETGLREECSTQYPTEE--------SDCFGPTHEELALLEKQLSESIVVRSK 200

Query: 734  XXXXXXXXXXXXXXXXXXGVTSLKSGLSGRKKR-SMQEVDYSDPXXXXXXXXXXXXXXXA 910
                                  +KSG + +KKR  +QEVD SDP               A
Sbjct: 201  RQTQRKAKRARAAEKAAANFVFMKSGSACKKKRVPVQEVDQSDPLRFFRGASTSSRLLSA 260

Query: 911  AEEIRLSEGIQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDRKSLRKRLTLGTFSKDK 1090
             EE+ LSEGIQDLLKLER++E L ER G +PTFAQWAAAA VD+ +LRKRL      KDK
Sbjct: 261  TEEVELSEGIQDLLKLERIEEELKERFGGKPTFAQWAAAARVDQITLRKRLNYAILCKDK 320

Query: 1091 MIKSNIRLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQS 1270
            MIKSNIRLVISIAKNY G G+N+QDLVQEGCRGLVRG EKFDASKGFKFSTYAHWWI+Q+
Sbjct: 321  MIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGVEKFDASKGFKFSTYAHWWIRQA 380

Query: 1271 VRKFLSEHSRTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEEVAVATGLSMKKLEAVM 1450
            VR+ LS+ SRTIRLP+HMV+A+YRV+EA K+ + ENGRHP  +EVA ATGLSMK+L AV+
Sbjct: 381  VRRSLSDQSRTIRLPFHMVDATYRVKEARKQFYSENGRHPDDKEVAEATGLSMKRLSAVL 440

Query: 1451 LTPKAPISLDQKIGFNESLKPTDVIAHPDAETSEDMLIKQFMRQDLNKVLDTLNPKEKQV 1630
            LTPKAP SLDQK+GFN  LK ++V A P+AET+ED+L+K+FM++DL +VL++L+P+E QV
Sbjct: 441  LTPKAPRSLDQKMGFNMDLKLSEVTADPEAETAEDLLMKEFMKKDLERVLESLSPRENQV 500

Query: 1631 VRWRFGLEDGRMKTLQEIGELMGVSRERVRQIEXXXXXXXXXXXXTNNLRRYIVT 1795
            +RWRFG+EDGRMKTLQEIGELMGVSRER+RQIE            T  LR+Y+V+
Sbjct: 501  IRWRFGMEDGRMKTLQEIGELMGVSRERIRQIELSAFRKLKNKNRTKQLRQYLVS 555