BLASTX nr result
ID: Zingiber23_contig00017405
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00017405
(405 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB56305.1| hypothetical protein L484_024844 [Morus notabilis] 57 3e-06
ref|XP_006828734.1| hypothetical protein AMTR_s00001p00047670 [A... 57 3e-06
ref|XP_004503997.1| PREDICTED: small nuclear ribonucleoprotein S... 57 3e-06
ref|XP_004164112.1| PREDICTED: small nuclear ribonucleoprotein S... 57 3e-06
ref|XP_004145538.1| PREDICTED: small nuclear ribonucleoprotein S... 57 3e-06
ref|NP_001237722.1| uncharacterized protein LOC100305856 [Glycin... 57 3e-06
ref|XP_002270532.2| PREDICTED: small nuclear ribonucleoprotein S... 57 3e-06
ref|XP_003630137.1| Small nuclear ribonucleoprotein Sm D3 [Medic... 57 3e-06
gb|EXB51221.1| hypothetical protein L484_019213 [Morus notabilis] 56 4e-06
gb|AFK46353.1| unknown [Lotus japonicus] 56 4e-06
ref|XP_002282385.1| PREDICTED: small nuclear ribonucleoprotein S... 56 4e-06
ref|XP_006366566.1| PREDICTED: small nuclear ribonucleoprotein S... 56 6e-06
ref|XP_004233553.1| PREDICTED: small nuclear ribonucleoprotein S... 56 6e-06
ref|XP_004291296.1| PREDICTED: small nuclear ribonucleoprotein S... 55 7e-06
gb|EMJ25100.1| hypothetical protein PRUPE_ppa013274mg [Prunus pe... 55 7e-06
gb|AFK39424.1| unknown [Lotus japonicus] 55 7e-06
gb|EMT25476.1| hypothetical protein F775_29436 [Aegilops tauschii] 55 9e-06
gb|EMS50224.1| hypothetical protein TRIUR3_26641 [Triticum urartu] 55 9e-06
ref|NP_001045599.1| Os02g0102700 [Oryza sativa Japonica Group] g... 55 9e-06
tpg|DAA44322.1| TPA: hypothetical protein ZEAMMB73_746512 [Zea m... 55 9e-06
>gb|EXB56305.1| hypothetical protein L484_024844 [Morus notabilis]
Length = 131
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/28 (92%), Positives = 28/28 (100%)
Frame = +2
Query: 2 FMVIPDMLKNAPMFKRLDARIRGKGSSL 85
FMVIPDMLKNAPMFKRLDARI+GKG+SL
Sbjct: 72 FMVIPDMLKNAPMFKRLDARIKGKGASL 99
>ref|XP_006828734.1| hypothetical protein AMTR_s00001p00047670 [Amborella trichopoda]
gi|548833713|gb|ERM96150.1| hypothetical protein
AMTR_s00001p00047670 [Amborella trichopoda]
Length = 133
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/28 (92%), Positives = 28/28 (100%)
Frame = +2
Query: 2 FMVIPDMLKNAPMFKRLDARIRGKGSSL 85
FMVIPDMLKNAPMFKRLDARI+GKG+SL
Sbjct: 72 FMVIPDMLKNAPMFKRLDARIKGKGASL 99
>ref|XP_004503997.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Cicer
arietinum]
Length = 131
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/28 (92%), Positives = 28/28 (100%)
Frame = +2
Query: 2 FMVIPDMLKNAPMFKRLDARIRGKGSSL 85
FMVIPDMLKNAPMFKRLDARI+GKG+SL
Sbjct: 72 FMVIPDMLKNAPMFKRLDARIKGKGASL 99
>ref|XP_004164112.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Cucumis
sativus]
Length = 132
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/28 (92%), Positives = 28/28 (100%)
Frame = +2
Query: 2 FMVIPDMLKNAPMFKRLDARIRGKGSSL 85
FMVIPDMLKNAPMFKRLDARI+GKG+SL
Sbjct: 72 FMVIPDMLKNAPMFKRLDARIKGKGASL 99
>ref|XP_004145538.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Cucumis
sativus]
Length = 132
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/28 (92%), Positives = 28/28 (100%)
Frame = +2
Query: 2 FMVIPDMLKNAPMFKRLDARIRGKGSSL 85
FMVIPDMLKNAPMFKRLDARI+GKG+SL
Sbjct: 72 FMVIPDMLKNAPMFKRLDARIKGKGASL 99
>ref|NP_001237722.1| uncharacterized protein LOC100305856 [Glycine max]
gi|356525557|ref|XP_003531391.1| PREDICTED: small
nuclear ribonucleoprotein Sm D3-like [Glycine max]
gi|255626793|gb|ACU13741.1| unknown [Glycine max]
gi|561033199|gb|ESW31778.1| hypothetical protein
PHAVU_002G266900g [Phaseolus vulgaris]
Length = 131
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/28 (92%), Positives = 28/28 (100%)
Frame = +2
Query: 2 FMVIPDMLKNAPMFKRLDARIRGKGSSL 85
FMVIPDMLKNAPMFKRLDARI+GKG+SL
Sbjct: 72 FMVIPDMLKNAPMFKRLDARIKGKGASL 99
>ref|XP_002270532.2| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Vitis
vinifera] gi|297745546|emb|CBI40711.3| unnamed protein
product [Vitis vinifera]
Length = 132
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/28 (92%), Positives = 28/28 (100%)
Frame = +2
Query: 2 FMVIPDMLKNAPMFKRLDARIRGKGSSL 85
FMVIPDMLKNAPMFKRLDARI+GKGS+L
Sbjct: 72 FMVIPDMLKNAPMFKRLDARIKGKGSAL 99
>ref|XP_003630137.1| Small nuclear ribonucleoprotein Sm D3 [Medicago truncatula]
gi|355524159|gb|AET04613.1| Small nuclear
ribonucleoprotein Sm D3 [Medicago truncatula]
gi|388503694|gb|AFK39913.1| unknown [Medicago
truncatula]
Length = 131
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/28 (92%), Positives = 28/28 (100%)
Frame = +2
Query: 2 FMVIPDMLKNAPMFKRLDARIRGKGSSL 85
FMVIPDMLKNAPMFKRLDARI+GKG+SL
Sbjct: 72 FMVIPDMLKNAPMFKRLDARIKGKGASL 99
>gb|EXB51221.1| hypothetical protein L484_019213 [Morus notabilis]
Length = 155
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = +2
Query: 2 FMVIPDMLKNAPMFKRLDARIRGKGSSL 85
FMV+PDMLKNAPMFKRLDARI+GKG+SL
Sbjct: 72 FMVVPDMLKNAPMFKRLDARIKGKGASL 99
>gb|AFK46353.1| unknown [Lotus japonicus]
Length = 132
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = +2
Query: 2 FMVIPDMLKNAPMFKRLDARIRGKGSSL 85
FMVIPDMLKNAPMFKRLDAR++GKG+SL
Sbjct: 72 FMVIPDMLKNAPMFKRLDARVKGKGASL 99
>ref|XP_002282385.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 [Vitis vinifera]
gi|297744494|emb|CBI37756.3| unnamed protein product
[Vitis vinifera]
Length = 132
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = +2
Query: 2 FMVIPDMLKNAPMFKRLDARIRGKGSSL 85
FMVIPDMLKNAPMFKRLDAR++GKGS+L
Sbjct: 72 FMVIPDMLKNAPMFKRLDARVKGKGSAL 99
>ref|XP_006366566.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Solanum
tuberosum]
Length = 132
Score = 55.8 bits (133), Expect = 6e-06
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = +2
Query: 2 FMVIPDMLKNAPMFKRLDARIRGKGSSL 85
FM+IPDMLKNAPMFKRL+ARI+GKGSSL
Sbjct: 72 FMIIPDMLKNAPMFKRLEARIKGKGSSL 99
>ref|XP_004233553.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Solanum
lycopersicum]
Length = 132
Score = 55.8 bits (133), Expect = 6e-06
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = +2
Query: 2 FMVIPDMLKNAPMFKRLDARIRGKGSSL 85
FM+IPDMLKNAPMFKRL+ARI+GKGSSL
Sbjct: 72 FMIIPDMLKNAPMFKRLEARIKGKGSSL 99
>ref|XP_004291296.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Fragaria
vesca subsp. vesca]
Length = 131
Score = 55.5 bits (132), Expect = 7e-06
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = +2
Query: 2 FMVIPDMLKNAPMFKRLDARIRGKGSSL 85
FMVIPDMLKNAPMFKRLDARI+GKG+S+
Sbjct: 72 FMVIPDMLKNAPMFKRLDARIKGKGASV 99
>gb|EMJ25100.1| hypothetical protein PRUPE_ppa013274mg [Prunus persica]
Length = 131
Score = 55.5 bits (132), Expect = 7e-06
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = +2
Query: 2 FMVIPDMLKNAPMFKRLDARIRGKGSSL 85
FMVIPDMLKNAPMFKRLD+RI+GKG+SL
Sbjct: 72 FMVIPDMLKNAPMFKRLDSRIKGKGASL 99
>gb|AFK39424.1| unknown [Lotus japonicus]
Length = 133
Score = 55.5 bits (132), Expect = 7e-06
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = +2
Query: 2 FMVIPDMLKNAPMFKRLDARIRGKGSSL 85
FMVIPDMLKNAPMFKRLDA+I+GKG+SL
Sbjct: 74 FMVIPDMLKNAPMFKRLDAKIKGKGASL 101
>gb|EMT25476.1| hypothetical protein F775_29436 [Aegilops tauschii]
Length = 118
Score = 55.1 bits (131), Expect = 9e-06
Identities = 24/28 (85%), Positives = 28/28 (100%)
Frame = +2
Query: 2 FMVIPDMLKNAPMFKRLDARIRGKGSSL 85
FM+IPDMLKNAPMFKRL+ARIRGKGS++
Sbjct: 72 FMIIPDMLKNAPMFKRLEARIRGKGSAI 99
>gb|EMS50224.1| hypothetical protein TRIUR3_26641 [Triticum urartu]
Length = 130
Score = 55.1 bits (131), Expect = 9e-06
Identities = 24/28 (85%), Positives = 28/28 (100%)
Frame = +2
Query: 2 FMVIPDMLKNAPMFKRLDARIRGKGSSL 85
FM+IPDMLKNAPMFKRL+ARIRGKGS++
Sbjct: 72 FMIIPDMLKNAPMFKRLEARIRGKGSAI 99
>ref|NP_001045599.1| Os02g0102700 [Oryza sativa Japonica Group]
gi|573918238|ref|XP_006646761.1| PREDICTED: small
nuclear ribonucleoprotein Sm D3-like [Oryza brachyantha]
gi|573924290|ref|XP_006649711.1| PREDICTED: small
nuclear ribonucleoprotein Sm D3-like [Oryza brachyantha]
gi|41052905|dbj|BAD07817.1| putative small nuclear
ribonucleoprotein polypeptide D3 [Oryza sativa Japonica
Group] gi|41053239|dbj|BAD08200.1| putative small
nuclear ribonucleoprotein polypeptide D3 [Oryza sativa
Japonica Group] gi|113535130|dbj|BAF07513.1|
Os02g0102700 [Oryza sativa Japonica Group]
gi|215692366|dbj|BAG87786.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215692586|dbj|BAG88006.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215737277|dbj|BAG96206.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218189864|gb|EEC72291.1| hypothetical protein
OsI_05466 [Oryza sativa Indica Group]
gi|222621997|gb|EEE56129.1| hypothetical protein
OsJ_05002 [Oryza sativa Japonica Group]
Length = 132
Score = 55.1 bits (131), Expect = 9e-06
Identities = 24/28 (85%), Positives = 28/28 (100%)
Frame = +2
Query: 2 FMVIPDMLKNAPMFKRLDARIRGKGSSL 85
FM+IPDMLKNAPMFKRL+ARIRGKGS++
Sbjct: 72 FMIIPDMLKNAPMFKRLEARIRGKGSAI 99
>tpg|DAA44322.1| TPA: hypothetical protein ZEAMMB73_746512 [Zea mays]
Length = 126
Score = 55.1 bits (131), Expect = 9e-06
Identities = 24/28 (85%), Positives = 28/28 (100%)
Frame = +2
Query: 2 FMVIPDMLKNAPMFKRLDARIRGKGSSL 85
FM+IPDMLKNAPMFKRL+ARIRGKGS++
Sbjct: 72 FMIIPDMLKNAPMFKRLEARIRGKGSAI 99