BLASTX nr result

ID: Zingiber23_contig00017399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00017399
         (271 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006650102.1| PREDICTED: ER membrane protein complex subun...    57   3e-06
ref|XP_004244507.1| PREDICTED: ER membrane protein complex subun...    56   4e-06
ref|XP_004164576.1| PREDICTED: ER membrane protein complex subun...    56   6e-06
ref|XP_004145491.1| PREDICTED: ER membrane protein complex subun...    56   6e-06

>ref|XP_006650102.1| PREDICTED: ER membrane protein complex subunit 4-like [Oryza
           brachyantha]
          Length = 177

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/39 (69%), Positives = 30/39 (76%)
 Frame = +3

Query: 150 MEKGKGVARRWAVEFADNSSYSLPSDIPDPLGFTRSSSD 266
           MEKGKG+ARRWAVE  D SS S  S +PDP GFTRS+ D
Sbjct: 1   MEKGKGLARRWAVELHDASSSSSHSSVPDPPGFTRSAPD 39


>ref|XP_004244507.1| PREDICTED: ER membrane protein complex subunit 4-like [Solanum
           lycopersicum]
          Length = 178

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 27/42 (64%), Positives = 32/42 (76%), Gaps = 3/42 (7%)
 Frame = +3

Query: 150 MEKGK---GVARRWAVEFADNSSYSLPSDIPDPLGFTRSSSD 266
           M+KGK   G+ RRWAV+F DNS+ S   DIPDPLGFTR+S D
Sbjct: 1   MDKGKAVMGMGRRWAVDFTDNSTSSPSRDIPDPLGFTRASQD 42


>ref|XP_004164576.1| PREDICTED: ER membrane protein complex subunit 4-like [Cucumis
           sativus]
          Length = 180

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/42 (64%), Positives = 33/42 (78%), Gaps = 3/42 (7%)
 Frame = +3

Query: 150 MEKGKGV---ARRWAVEFADNSSYSLPSDIPDPLGFTRSSSD 266
           MEKGKG+   +RRWAV+F+DNSS +   DIPDP GFTR+S D
Sbjct: 1   MEKGKGLMVDSRRWAVDFSDNSSSNSTRDIPDPPGFTRASQD 42


>ref|XP_004145491.1| PREDICTED: ER membrane protein complex subunit 4-like [Cucumis
           sativus]
          Length = 180

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/42 (64%), Positives = 33/42 (78%), Gaps = 3/42 (7%)
 Frame = +3

Query: 150 MEKGKGV---ARRWAVEFADNSSYSLPSDIPDPLGFTRSSSD 266
           MEKGKG+   +RRWAV+F+DNSS +   DIPDP GFTR+S D
Sbjct: 1   MEKGKGLMVDSRRWAVDFSDNSSSNSTRDIPDPPGFTRASQD 42


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