BLASTX nr result
ID: Zingiber23_contig00017344
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00017344
(248 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006652898.1| PREDICTED: protein vip1-like [Oryza brachyan... 119 4e-25
ref|XP_004135186.1| PREDICTED: protein vip1-like [Cucumis sativu... 119 5e-25
gb|EMT04373.1| hypothetical protein F775_26889 [Aegilops tauschii] 115 5e-24
gb|EOY01956.1| RNA-binding (RRM/RBD/RNP motifs) family protein [... 114 1e-23
ref|XP_003580655.1| PREDICTED: protein vip1-like isoform 1 [Brac... 114 1e-23
gb|EMS56140.1| Protein vip1 [Triticum urartu] 114 1e-23
dbj|BAJ86974.1| predicted protein [Hordeum vulgare subsp. vulgare] 113 3e-23
ref|XP_002276614.1| PREDICTED: protein vip1 isoform 1 [Vitis vin... 111 1e-22
gb|EAY95756.1| hypothetical protein OsI_17631 [Oryza sativa Indi... 110 1e-22
ref|NP_001054044.1| Os04g0641400 [Oryza sativa Japonica Group] g... 110 1e-22
emb|CAC09457.2| H0423H10.3 [Oryza sativa Indica Group] gi|222629... 110 1e-22
ref|XP_002520109.1| nucleic acid binding protein, putative [Rici... 110 3e-22
ref|XP_002448622.1| hypothetical protein SORBIDRAFT_06g030330 [S... 107 2e-21
gb|AFW59632.1| putative RNA recognition motif containing family ... 107 2e-21
gb|AFW59631.1| putative RNA recognition motif containing family ... 107 2e-21
gb|ACR38286.1| unknown [Zea mays] gi|413919701|gb|AFW59633.1| pu... 107 2e-21
gb|ACR35144.1| unknown [Zea mays] gi|413919698|gb|AFW59630.1| pu... 107 2e-21
ref|XP_006357116.1| PREDICTED: protein vip1-like [Solanum tubero... 105 6e-21
ref|XP_006438656.1| hypothetical protein CICLE_v10032573mg [Citr... 105 6e-21
tpg|DAA35749.1| TPA: putative RNA recognition motif containing f... 105 8e-21
>ref|XP_006652898.1| PREDICTED: protein vip1-like [Oryza brachyantha]
Length = 244
Score = 119 bits (298), Expect = 4e-25
Identities = 58/82 (70%), Positives = 72/82 (87%)
Frame = +1
Query: 1 HQVSATAAAKVADLSKRVGLTDTIYAGVDAVRSVDERYHVSETTRTVVSATGRTAAAVTN 180
HQV+ATAAAK A+LSKR+GLTD + AGV A+RSVDE YHVSETT+TV +ATGRTAA V N
Sbjct: 149 HQVTATAAAKAAELSKRIGLTDRVSAGVGAIRSVDETYHVSETTKTVATATGRTAAKVVN 208
Query: 181 TVVSSSYFSAGALLVSDVLNRA 246
+V+SSYFSAGA+++SD L++A
Sbjct: 209 GIVTSSYFSAGAMMLSDALHKA 230
>ref|XP_004135186.1| PREDICTED: protein vip1-like [Cucumis sativus]
gi|449478426|ref|XP_004155315.1| PREDICTED: protein
vip1-like [Cucumis sativus]
Length = 244
Score = 119 bits (297), Expect = 5e-25
Identities = 60/82 (73%), Positives = 70/82 (85%)
Frame = +1
Query: 1 HQVSATAAAKVADLSKRVGLTDTIYAGVDAVRSVDERYHVSETTRTVVSATGRTAAAVTN 180
HQVSATAAAKVADLS R+GLTD + AG +AV+SVDE+YHV ETT++ +SATGRTAAA +
Sbjct: 149 HQVSATAAAKVADLSHRIGLTDMLGAGYEAVKSVDEKYHVLETTKSAISATGRTAAAAAD 208
Query: 181 TVVSSSYFSAGALLVSDVLNRA 246
TVV SSYFS GAL +SD LNRA
Sbjct: 209 TVVRSSYFSRGALFMSDALNRA 230
>gb|EMT04373.1| hypothetical protein F775_26889 [Aegilops tauschii]
Length = 273
Score = 115 bits (289), Expect = 5e-24
Identities = 56/82 (68%), Positives = 70/82 (85%)
Frame = +1
Query: 1 HQVSATAAAKVADLSKRVGLTDTIYAGVDAVRSVDERYHVSETTRTVVSATGRTAAAVTN 180
HQ+S +AAAK A+LS+R+GLTD + AGV A+RSVDE YHV+ETT+TV +ATGRTA V N
Sbjct: 178 HQLSGSAAAKAAELSRRLGLTDRVSAGVGAIRSVDETYHVTETTKTVATATGRTAVKVMN 237
Query: 181 TVVSSSYFSAGALLVSDVLNRA 246
T+V+SSYFSAGA++VSD L RA
Sbjct: 238 TIVTSSYFSAGAMMVSDALTRA 259
>gb|EOY01956.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Theobroma cacao]
Length = 244
Score = 114 bits (286), Expect = 1e-23
Identities = 58/82 (70%), Positives = 68/82 (82%)
Frame = +1
Query: 1 HQVSATAAAKVADLSKRVGLTDTIYAGVDAVRSVDERYHVSETTRTVVSATGRTAAAVTN 180
HQVSATAAAKVA+LS+R+GLTD A V+AVRSVD+RYHVSE T++ +S GRTAAA N
Sbjct: 149 HQVSATAAAKVAELSERIGLTDKFCASVEAVRSVDQRYHVSENTKSAISTAGRTAAAAAN 208
Query: 181 TVVSSSYFSAGALLVSDVLNRA 246
TV+SSSYFS GAL VS L+RA
Sbjct: 209 TVISSSYFSRGALWVSGALDRA 230
>ref|XP_003580655.1| PREDICTED: protein vip1-like isoform 1 [Brachypodium distachyon]
gi|357166273|ref|XP_003580656.1| PREDICTED: protein
vip1-like isoform 2 [Brachypodium distachyon]
Length = 244
Score = 114 bits (286), Expect = 1e-23
Identities = 55/82 (67%), Positives = 70/82 (85%)
Frame = +1
Query: 1 HQVSATAAAKVADLSKRVGLTDTIYAGVDAVRSVDERYHVSETTRTVVSATGRTAAAVTN 180
HQ+S +AAA+ A+LSKR+GLTD + AGV A+RSVDE Y+VS+TT+TV +ATGRTA V N
Sbjct: 149 HQISGSAAARAAELSKRIGLTDRVSAGVGAIRSVDETYNVSKTTKTVATATGRTAVKVVN 208
Query: 181 TVVSSSYFSAGALLVSDVLNRA 246
T+V+SSYFSAGA++VSD L RA
Sbjct: 209 TIVTSSYFSAGAMMVSDALTRA 230
>gb|EMS56140.1| Protein vip1 [Triticum urartu]
Length = 244
Score = 114 bits (285), Expect = 1e-23
Identities = 55/82 (67%), Positives = 70/82 (85%)
Frame = +1
Query: 1 HQVSATAAAKVADLSKRVGLTDTIYAGVDAVRSVDERYHVSETTRTVVSATGRTAAAVTN 180
HQ+S +AAAK A+LS+R+GLTD + AGV A+RSVDE YHV+ETT+TV +ATGRTA V N
Sbjct: 149 HQLSGSAAAKAAELSRRLGLTDRVSAGVGAIRSVDETYHVTETTKTVATATGRTAVKVMN 208
Query: 181 TVVSSSYFSAGALLVSDVLNRA 246
T+V+SSYFSAGA++VS+ L RA
Sbjct: 209 TIVTSSYFSAGAMMVSEALTRA 230
>dbj|BAJ86974.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 244
Score = 113 bits (282), Expect = 3e-23
Identities = 54/82 (65%), Positives = 70/82 (85%)
Frame = +1
Query: 1 HQVSATAAAKVADLSKRVGLTDTIYAGVDAVRSVDERYHVSETTRTVVSATGRTAAAVTN 180
HQ+S +AAAK A+LS+R+GLTD + AGV A+RSVDE YHV+ETT+TV +ATGRTA V N
Sbjct: 149 HQLSGSAAAKAAELSRRLGLTDRVSAGVGAIRSVDETYHVTETTKTVATATGRTAVKVMN 208
Query: 181 TVVSSSYFSAGALLVSDVLNRA 246
T+V+SSYFSAGA+++S+ L RA
Sbjct: 209 TIVTSSYFSAGAMMLSEALTRA 230
>ref|XP_002276614.1| PREDICTED: protein vip1 isoform 1 [Vitis vinifera]
gi|225425750|ref|XP_002276661.1| PREDICTED: protein vip1
isoform 2 [Vitis vinifera]
gi|359473262|ref|XP_003631279.1| PREDICTED: protein vip1
[Vitis vinifera]
Length = 246
Score = 111 bits (277), Expect = 1e-22
Identities = 56/82 (68%), Positives = 67/82 (81%)
Frame = +1
Query: 1 HQVSATAAAKVADLSKRVGLTDTIYAGVDAVRSVDERYHVSETTRTVVSATGRTAAAVTN 180
HQ SATA A VA+LS+R+GLTD AGV+A +SVD+RYH+SE T++ VSATGRTAAA
Sbjct: 151 HQFSATAVATVAELSQRIGLTDKFCAGVEAAKSVDQRYHISEITKSAVSATGRTAAAAAT 210
Query: 181 TVVSSSYFSAGALLVSDVLNRA 246
TVV+SSYFS GAL VSD L+RA
Sbjct: 211 TVVNSSYFSKGALWVSDALSRA 232
>gb|EAY95756.1| hypothetical protein OsI_17631 [Oryza sativa Indica Group]
Length = 251
Score = 110 bits (276), Expect = 1e-22
Identities = 57/89 (64%), Positives = 71/89 (79%), Gaps = 7/89 (7%)
Frame = +1
Query: 1 HQVSATAAAKVADLSKRVGLTDTIY-------AGVDAVRSVDERYHVSETTRTVVSATGR 159
HQV+ATAAAK A+LSKR+GLTD + AGV A+RSVDE YHVSETT+TV +ATGR
Sbjct: 149 HQVTATAAAKAAELSKRIGLTDRVSGLTDRVSAGVGAIRSVDETYHVSETTKTVATATGR 208
Query: 160 TAAAVTNTVVSSSYFSAGALLVSDVLNRA 246
TA V N +++SSYFSAGA+++SD L+RA
Sbjct: 209 TAVKVVNGIMTSSYFSAGAMMLSDALHRA 237
>ref|NP_001054044.1| Os04g0641400 [Oryza sativa Japonica Group]
gi|38344906|emb|CAD41850.2| OSJNBb0079B02.9 [Oryza
sativa Japonica Group] gi|38347315|emb|CAE05963.2|
OSJNBa0063C18.4 [Oryza sativa Japonica Group]
gi|90399224|emb|CAH68137.1| B0414F07.7 [Oryza sativa
Indica Group] gi|113565615|dbj|BAF15958.1| Os04g0641400
[Oryza sativa Japonica Group]
gi|215766559|dbj|BAG98718.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 251
Score = 110 bits (276), Expect = 1e-22
Identities = 57/89 (64%), Positives = 71/89 (79%), Gaps = 7/89 (7%)
Frame = +1
Query: 1 HQVSATAAAKVADLSKRVGLTDTIY-------AGVDAVRSVDERYHVSETTRTVVSATGR 159
HQV+ATAAAK A+LSKR+GLTD + AGV A+RSVDE YHVSETT+TV +ATGR
Sbjct: 149 HQVTATAAAKAAELSKRIGLTDRVSGLTDRVSAGVGAIRSVDETYHVSETTKTVATATGR 208
Query: 160 TAAAVTNTVVSSSYFSAGALLVSDVLNRA 246
TA V N +++SSYFSAGA+++SD L+RA
Sbjct: 209 TAVKVVNGIMTSSYFSAGAMMLSDALHRA 237
>emb|CAC09457.2| H0423H10.3 [Oryza sativa Indica Group] gi|222629654|gb|EEE61786.1|
hypothetical protein OsJ_16368 [Oryza sativa Japonica
Group]
Length = 291
Score = 110 bits (276), Expect = 1e-22
Identities = 57/89 (64%), Positives = 71/89 (79%), Gaps = 7/89 (7%)
Frame = +1
Query: 1 HQVSATAAAKVADLSKRVGLTDTIY-------AGVDAVRSVDERYHVSETTRTVVSATGR 159
HQV+ATAAAK A+LSKR+GLTD + AGV A+RSVDE YHVSETT+TV +ATGR
Sbjct: 189 HQVTATAAAKAAELSKRIGLTDRVSGLTDRVSAGVGAIRSVDETYHVSETTKTVATATGR 248
Query: 160 TAAAVTNTVVSSSYFSAGALLVSDVLNRA 246
TA V N +++SSYFSAGA+++SD L+RA
Sbjct: 249 TAVKVVNGIMTSSYFSAGAMMLSDALHRA 277
>ref|XP_002520109.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223540601|gb|EEF42164.1| nucleic acid binding
protein, putative [Ricinus communis]
Length = 245
Score = 110 bits (274), Expect = 3e-22
Identities = 53/82 (64%), Positives = 70/82 (85%)
Frame = +1
Query: 1 HQVSATAAAKVADLSKRVGLTDTIYAGVDAVRSVDERYHVSETTRTVVSATGRTAAAVTN 180
HQV+ATAAAKVA+ ++R+GL D I+AG++A++SVD++YHVS+ T++ VSATGRTA A +
Sbjct: 150 HQVTATAAAKVAEFTERIGLADKIFAGMEAMKSVDQKYHVSDMTKSAVSATGRTAVAAAS 209
Query: 181 TVVSSSYFSAGALLVSDVLNRA 246
TVV+SSYFS GAL VS LNRA
Sbjct: 210 TVVNSSYFSKGALWVSGALNRA 231
>ref|XP_002448622.1| hypothetical protein SORBIDRAFT_06g030330 [Sorghum bicolor]
gi|241939805|gb|EES12950.1| hypothetical protein
SORBIDRAFT_06g030330 [Sorghum bicolor]
Length = 244
Score = 107 bits (267), Expect = 2e-21
Identities = 53/82 (64%), Positives = 67/82 (81%)
Frame = +1
Query: 1 HQVSATAAAKVADLSKRVGLTDTIYAGVDAVRSVDERYHVSETTRTVVSATGRTAAAVTN 180
H ++A AAA+ A+LSKR+GLTD + AGV A+RSVDE Y V ETT+TV +ATGRTAA V N
Sbjct: 149 HGLTAAAAARAAELSKRIGLTDRVNAGVGAMRSVDETYRVRETTKTVATATGRTAAKVVN 208
Query: 181 TVVSSSYFSAGALLVSDVLNRA 246
+V+SSYFSAGA+++SD L RA
Sbjct: 209 GIVTSSYFSAGAMMLSDALTRA 230
>gb|AFW59632.1| putative RNA recognition motif containing family protein [Zea mays]
Length = 232
Score = 107 bits (266), Expect = 2e-21
Identities = 53/80 (66%), Positives = 67/80 (83%)
Frame = +1
Query: 7 VSATAAAKVADLSKRVGLTDTIYAGVDAVRSVDERYHVSETTRTVVSATGRTAAAVTNTV 186
++A AAAK A+LSKR+GLTD + AGV A+RSVDE Y V+ETT+TV +ATGRTAA V N +
Sbjct: 139 LTAAAAAKAAELSKRIGLTDRVSAGVGAMRSVDETYRVTETTKTVATATGRTAAKVVNGI 198
Query: 187 VSSSYFSAGALLVSDVLNRA 246
V+SSYFSAGA+++SD L RA
Sbjct: 199 VTSSYFSAGAMMLSDALTRA 218
>gb|AFW59631.1| putative RNA recognition motif containing family protein [Zea mays]
Length = 194
Score = 107 bits (266), Expect = 2e-21
Identities = 53/80 (66%), Positives = 67/80 (83%)
Frame = +1
Query: 7 VSATAAAKVADLSKRVGLTDTIYAGVDAVRSVDERYHVSETTRTVVSATGRTAAAVTNTV 186
++A AAAK A+LSKR+GLTD + AGV A+RSVDE Y V+ETT+TV +ATGRTAA V N +
Sbjct: 101 LTAAAAAKAAELSKRIGLTDRVSAGVGAMRSVDETYRVTETTKTVATATGRTAAKVVNGI 160
Query: 187 VSSSYFSAGALLVSDVLNRA 246
V+SSYFSAGA+++SD L RA
Sbjct: 161 VTSSYFSAGAMMLSDALTRA 180
>gb|ACR38286.1| unknown [Zea mays] gi|413919701|gb|AFW59633.1| putative RNA
recognition motif containing family protein isoform 1
[Zea mays] gi|413919702|gb|AFW59634.1| putative RNA
recognition motif containing family protein isoform 2
[Zea mays]
Length = 244
Score = 107 bits (266), Expect = 2e-21
Identities = 53/80 (66%), Positives = 67/80 (83%)
Frame = +1
Query: 7 VSATAAAKVADLSKRVGLTDTIYAGVDAVRSVDERYHVSETTRTVVSATGRTAAAVTNTV 186
++A AAAK A+LSKR+GLTD + AGV A+RSVDE Y V+ETT+TV +ATGRTAA V N +
Sbjct: 151 LTAAAAAKAAELSKRIGLTDRVSAGVGAMRSVDETYRVTETTKTVATATGRTAAKVVNGI 210
Query: 187 VSSSYFSAGALLVSDVLNRA 246
V+SSYFSAGA+++SD L RA
Sbjct: 211 VTSSYFSAGAMMLSDALTRA 230
>gb|ACR35144.1| unknown [Zea mays] gi|413919698|gb|AFW59630.1| putative RNA
recognition motif containing family protein [Zea mays]
Length = 118
Score = 107 bits (266), Expect = 2e-21
Identities = 53/80 (66%), Positives = 67/80 (83%)
Frame = +1
Query: 7 VSATAAAKVADLSKRVGLTDTIYAGVDAVRSVDERYHVSETTRTVVSATGRTAAAVTNTV 186
++A AAAK A+LSKR+GLTD + AGV A+RSVDE Y V+ETT+TV +ATGRTAA V N +
Sbjct: 25 LTAAAAAKAAELSKRIGLTDRVSAGVGAMRSVDETYRVTETTKTVATATGRTAAKVVNGI 84
Query: 187 VSSSYFSAGALLVSDVLNRA 246
V+SSYFSAGA+++SD L RA
Sbjct: 85 VTSSYFSAGAMMLSDALTRA 104
>ref|XP_006357116.1| PREDICTED: protein vip1-like [Solanum tuberosum]
Length = 255
Score = 105 bits (262), Expect = 6e-21
Identities = 54/82 (65%), Positives = 64/82 (78%)
Frame = +1
Query: 1 HQVSATAAAKVADLSKRVGLTDTIYAGVDAVRSVDERYHVSETTRTVVSATGRTAAAVTN 180
+ VS+TAAAKVADLSKRVGLTD I +G++ V+ VDE+YH+SE T + S TG+TA A
Sbjct: 148 YHVSSTAAAKVADLSKRVGLTDKIQSGLETVKCVDEKYHLSELTMSAASYTGKTAVAAAT 207
Query: 181 TVVSSSYFSAGALLVSDVLNRA 246
VVSSSYFS GA VSDVLNRA
Sbjct: 208 AVVSSSYFSKGAFWVSDVLNRA 229
>ref|XP_006438656.1| hypothetical protein CICLE_v10032573mg [Citrus clementina]
gi|568859339|ref|XP_006483198.1| PREDICTED: protein
vip1-like [Citrus sinensis] gi|557540852|gb|ESR51896.1|
hypothetical protein CICLE_v10032573mg [Citrus
clementina]
Length = 244
Score = 105 bits (262), Expect = 6e-21
Identities = 52/80 (65%), Positives = 69/80 (86%)
Frame = +1
Query: 7 VSATAAAKVADLSKRVGLTDTIYAGVDAVRSVDERYHVSETTRTVVSATGRTAAAVTNTV 186
VSA+AAAKV++L++++GLTD I GV+AV+SVDE+YH+S TT++ VSATG+ AAA N+V
Sbjct: 151 VSASAAAKVSELNQKIGLTDKIGLGVEAVKSVDEKYHISMTTKSAVSATGQAAAAAANSV 210
Query: 187 VSSSYFSAGALLVSDVLNRA 246
V+SSYF+ GAL VSD LNRA
Sbjct: 211 VNSSYFAKGALWVSDALNRA 230
>tpg|DAA35749.1| TPA: putative RNA recognition motif containing family protein [Zea
mays]
Length = 249
Score = 105 bits (261), Expect = 8e-21
Identities = 52/80 (65%), Positives = 66/80 (82%)
Frame = +1
Query: 7 VSATAAAKVADLSKRVGLTDTIYAGVDAVRSVDERYHVSETTRTVVSATGRTAAAVTNTV 186
++A AAA+ A+LSKR+GLTD + AGV A+RSVDE Y V ETT+TV +ATGRTAA V N +
Sbjct: 156 LTAAAAARAAELSKRIGLTDRVNAGVGAMRSVDETYRVRETTKTVATATGRTAAKVVNGI 215
Query: 187 VSSSYFSAGALLVSDVLNRA 246
V+SSYFSAGA+++SD L RA
Sbjct: 216 VTSSYFSAGAMILSDALTRA 235