BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00017328
         (1456 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28783.3| unnamed protein product [Vitis vinifera]              573   e-161
ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis v...   573   e-161
gb|EOY12189.1| DNA topoisomerase I alpha isoform 1 [Theobroma ca...   571   e-160
dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]                 564   e-158
gb|AFW61219.1| DNA topoisomerase I [Zea mays]                         559   e-157
gb|ACL52396.1| unknown [Zea mays]                                     559   e-157
ref|XP_004972822.1| PREDICTED: DNA topoisomerase 1-like isoform ...   559   e-156
dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]                559   e-156
ref|XP_002300344.1| DNA topoisomerase family protein [Populus tr...   558   e-156
ref|XP_006659124.1| PREDICTED: DNA topoisomerase 1-like [Oryza b...   556   e-156
ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform ...   556   e-156
ref|NP_001157806.1| topoisomerase I [Zea mays] gi|240065169|gb|A...   556   e-156
ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citr...   555   e-155
ref|XP_002317355.1| DNA topoisomerase family protein [Populus tr...   554   e-155
dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]       553   e-155
ref|NP_001061015.1| Os08g0154600 [Oryza sativa Japonica Group] g...   553   e-155
gb|EAZ05628.1| hypothetical protein OsI_27847 [Oryza sativa Indi...   553   e-155
ref|XP_002443872.1| hypothetical protein SORBIDRAFT_07g003610 [S...   552   e-154
dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]               551   e-154
gb|EMJ02410.1| hypothetical protein PRUPE_ppa001622mg [Prunus pe...   550   e-154

>emb|CBI28783.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  573 bits (1478), Expect = e-161
 Identities = 288/380 (75%), Positives = 315/380 (82%)
 Frame = -3

Query: 1454 CPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRLLKD 1275
            CPIPGERWKEV+HDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEK+RLLKD
Sbjct: 356  CPIPGERWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKD 415

Query: 1274 YIQDIRANYTRDFNSKDPTKRQISVATYLIDKLALRAGNEKXXXXXXXXXDTVGCCTLKV 1095
            YIQ+IRA YT+DF +KD  KRQI+VATYLIDKLALRAGNEK          TVGCCTLKV
Sbjct: 416  YIQNIRATYTKDFTNKDTMKRQIAVATYLIDKLALRAGNEKDDDEAD----TVGCCTLKV 471

Query: 1094 ENVELVPPNKLKFDFLGKDSIRYLNTVEVEPPVYTAIGDFRTAKKSNGSXXXXXXXXXXX 915
            ENV LVPPNKL+FDFLGKDSIRY NTVEVE PVY AIG F+T K                
Sbjct: 472  ENVALVPPNKLEFDFLGKDSIRYFNTVEVELPVYKAIGQFKTGKSGGDDLFDKLD----- 526

Query: 914  XDTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETRDGSVPEKVAVYQHANKEVAI 735
              TSKLNAHLKELMPGLTAKVFRTYNASITLD +LN+E R G   EK+ +YQHANKEVAI
Sbjct: 527  --TSKLNAHLKELMPGLTAKVFRTYNASITLDEMLNREARGGDAMEKIVIYQHANKEVAI 584

Query: 734  ICNHQRSVSKSHETQMSKLNEKINDLKTQREELTTDLSRAKLRKPPLEDKDGKPKKNLAP 555
            ICNHQRSVSKSH+ QMS+L+EK+ +L+   +EL TDL+RAK  KPPL+D DGKPKKN+ P
Sbjct: 585  ICNHQRSVSKSHDVQMSRLSEKMRELQGVLDELKTDLARAKKGKPPLKDSDGKPKKNMTP 644

Query: 554  QAIENKIAQLDAKIEKMEMDKQIKEDLKTVALGTSKINYLDLRISVAWCKRHEVPIEKIF 375
            + +E KIAQ + KIEKME D + KEDLKTVALGTSKINYLD RISVAWCKR EVPIEKIF
Sbjct: 645  EVLERKIAQTNTKIEKMERDMKTKEDLKTVALGTSKINYLDPRISVAWCKRQEVPIEKIF 704

Query: 374  NKSLLAKFTWAMDVDPNFRF 315
            NKSLLAKF WAMDVDP+FRF
Sbjct: 705  NKSLLAKFAWAMDVDPSFRF 724


>ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
          Length = 883

 Score =  573 bits (1478), Expect = e-161
 Identities = 288/380 (75%), Positives = 315/380 (82%)
 Frame = -3

Query: 1454 CPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRLLKD 1275
            CPIPGERWKEV+HDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEK+RLLKD
Sbjct: 515  CPIPGERWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKD 574

Query: 1274 YIQDIRANYTRDFNSKDPTKRQISVATYLIDKLALRAGNEKXXXXXXXXXDTVGCCTLKV 1095
            YIQ+IRA YT+DF +KD  KRQI+VATYLIDKLALRAGNEK          TVGCCTLKV
Sbjct: 575  YIQNIRATYTKDFTNKDTMKRQIAVATYLIDKLALRAGNEKDDDEAD----TVGCCTLKV 630

Query: 1094 ENVELVPPNKLKFDFLGKDSIRYLNTVEVEPPVYTAIGDFRTAKKSNGSXXXXXXXXXXX 915
            ENV LVPPNKL+FDFLGKDSIRY NTVEVE PVY AIG F+T K                
Sbjct: 631  ENVALVPPNKLEFDFLGKDSIRYFNTVEVELPVYKAIGQFKTGKSGGDDLFDKLD----- 685

Query: 914  XDTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETRDGSVPEKVAVYQHANKEVAI 735
              TSKLNAHLKELMPGLTAKVFRTYNASITLD +LN+E R G   EK+ +YQHANKEVAI
Sbjct: 686  --TSKLNAHLKELMPGLTAKVFRTYNASITLDEMLNREARGGDAMEKIVIYQHANKEVAI 743

Query: 734  ICNHQRSVSKSHETQMSKLNEKINDLKTQREELTTDLSRAKLRKPPLEDKDGKPKKNLAP 555
            ICNHQRSVSKSH+ QMS+L+EK+ +L+   +EL TDL+RAK  KPPL+D DGKPKKN+ P
Sbjct: 744  ICNHQRSVSKSHDVQMSRLSEKMRELQGVLDELKTDLARAKKGKPPLKDSDGKPKKNMTP 803

Query: 554  QAIENKIAQLDAKIEKMEMDKQIKEDLKTVALGTSKINYLDLRISVAWCKRHEVPIEKIF 375
            + +E KIAQ + KIEKME D + KEDLKTVALGTSKINYLD RISVAWCKR EVPIEKIF
Sbjct: 804  EVLERKIAQTNTKIEKMERDMKTKEDLKTVALGTSKINYLDPRISVAWCKRQEVPIEKIF 863

Query: 374  NKSLLAKFTWAMDVDPNFRF 315
            NKSLLAKF WAMDVDP+FRF
Sbjct: 864  NKSLLAKFAWAMDVDPSFRF 883


>gb|EOY12189.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
            gi|508720293|gb|EOY12190.1| DNA topoisomerase I alpha
            isoform 1 [Theobroma cacao]
          Length = 904

 Score =  571 bits (1471), Expect = e-160
 Identities = 289/380 (76%), Positives = 315/380 (82%)
 Frame = -3

Query: 1454 CPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRLLKD 1275
            CPIPGERWK++KHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEK+R+LKD
Sbjct: 536  CPIPGERWKDIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKD 595

Query: 1274 YIQDIRANYTRDFNSKDPTKRQISVATYLIDKLALRAGNEKXXXXXXXXXDTVGCCTLKV 1095
            YI++IRA YT+DF +KD  KRQI+VATYLIDKLALRAGNEK          TVGCCTLKV
Sbjct: 596  YIKNIRAAYTKDFTTKDVMKRQIAVATYLIDKLALRAGNEKDDDEAD----TVGCCTLKV 651

Query: 1094 ENVELVPPNKLKFDFLGKDSIRYLNTVEVEPPVYTAIGDFRTAKKSNGSXXXXXXXXXXX 915
             NVE +PPNKLKFDFLGKDSI+Y+NTVEVE PVY AIG F+T K  +             
Sbjct: 652  GNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKSKSDDLFDKLD----- 706

Query: 914  XDTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETRDGSVPEKVAVYQHANKEVAI 735
              TSKLNAHLKELMPGLTAKVFRTYNASITLD +LNKET+DG V EKV VYQ ANKEVAI
Sbjct: 707  --TSKLNAHLKELMPGLTAKVFRTYNASITLDEMLNKETKDGDVAEKVVVYQRANKEVAI 764

Query: 734  ICNHQRSVSKSHETQMSKLNEKINDLKTQREELTTDLSRAKLRKPPLEDKDGKPKKNLAP 555
            ICNHQRS+SKSH  QMS+L EKI +LK   +EL  DL RAK  KPPL+D DGK K+NL P
Sbjct: 765  ICNHQRSISKSHSAQMSRLTEKITELKGVLKELKIDLDRAKKGKPPLKDADGKQKRNLTP 824

Query: 554  QAIENKIAQLDAKIEKMEMDKQIKEDLKTVALGTSKINYLDLRISVAWCKRHEVPIEKIF 375
            QAI+ KI Q +AKIEKME D Q KEDLKTVALGTSKINYLD RI+VAWCKRHEVPIEKIF
Sbjct: 825  QAIQKKIDQTNAKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIF 884

Query: 374  NKSLLAKFTWAMDVDPNFRF 315
            NKSLLAKF WAMDVDP+FRF
Sbjct: 885  NKSLLAKFAWAMDVDPDFRF 904


>dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]
          Length = 910

 Score =  564 bits (1454), Expect = e-158
 Identities = 291/382 (76%), Positives = 319/382 (83%), Gaps = 2/382 (0%)
 Frame = -3

Query: 1454 CPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRLLKD 1275
            CP+PGERWKEV+HDNTVTWLAFWNDPINPKEFKYVFLAASS+LKG SDKEKYEK+RLLKD
Sbjct: 540  CPVPGERWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKARLLKD 599

Query: 1274 YIQDIRANYTRDFNSKDPTKRQISVATYLIDKLALRAGNEKXXXXXXXXXDTVGCCTLKV 1095
            YIQ IRA YT+DF SKDPTK+QI+VATYLIDKLALRAGNEK         DTVGCCTLKV
Sbjct: 600  YIQGIRAAYTKDFASKDPTKKQIAVATYLIDKLALRAGNEK----DDDEADTVGCCTLKV 655

Query: 1094 ENVELVPPNKLKFDFLGKDSIRYLNTVEVEPPVYTAIGDFRTAKKSNGSXXXXXXXXXXX 915
            ENVE VPPN LKFDFLGKDSIRY N VEVE  V+ AI  FR+ K+ +             
Sbjct: 656  ENVEPVPPNILKFDFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSD-------LFDL 708

Query: 914  XDTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETRDGSVPEKVAVYQHANKEVAI 735
             DTSKLNAHLKELMPGLTAKVFRTYNASITLD +L++ET+ G V EKV VYQHANKEVAI
Sbjct: 709  LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRETKGGDVAEKVVVYQHANKEVAI 768

Query: 734  ICNHQRSVSKSHETQMSKLNEKINDLKTQREELTTDLSRAKLRKPPLEDK--DGKPKKNL 561
            ICNHQR+VSKSH  QM +LNEKI +LK   EEL +DLSR K  KPPL+ K  DGKPK+NL
Sbjct: 769  ICNHQRTVSKSHSAQMLRLNEKIEELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKRNL 828

Query: 560  APQAIENKIAQLDAKIEKMEMDKQIKEDLKTVALGTSKINYLDLRISVAWCKRHEVPIEK 381
             P+++E KIAQ +AKIEKME DK+ KEDLKTVALGTSKINYLD RI+VAWCKRHEVPIEK
Sbjct: 829  NPESLEKKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK 888

Query: 380  IFNKSLLAKFTWAMDVDPNFRF 315
            IFNKSLLAKFTWAMDVDP+FRF
Sbjct: 889  IFNKSLLAKFTWAMDVDPSFRF 910


>gb|AFW61219.1| DNA topoisomerase I [Zea mays]
          Length = 602

 Score =  559 bits (1441), Expect = e-157
 Identities = 283/380 (74%), Positives = 317/380 (83%)
 Frame = -3

Query: 1454 CPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRLLKD 1275
            CPIPGE WKEVKHDNTVTWLAFWNDPINPK+FKYVFLAASSSLKGQSDKEKYEKSR LK 
Sbjct: 234  CPIPGESWKEVKHDNTVTWLAFWNDPINPKDFKYVFLAASSSLKGQSDKEKYEKSRKLKG 293

Query: 1274 YIQDIRANYTRDFNSKDPTKRQISVATYLIDKLALRAGNEKXXXXXXXXXDTVGCCTLKV 1095
            +IQ IR NYT+DF +KD T+RQI+VATYLIDKLALRAGNEK          TVGCCTLKV
Sbjct: 294  HIQRIRENYTKDFKNKDVTRRQIAVATYLIDKLALRAGNEKDDDEAD----TVGCCTLKV 349

Query: 1094 ENVELVPPNKLKFDFLGKDSIRYLNTVEVEPPVYTAIGDFRTAKKSNGSXXXXXXXXXXX 915
            +NV  +PPN+++FDFLGKDSIRY NTVEVE  VY AI  FR  KK               
Sbjct: 350  DNVTCMPPNQIQFDFLGKDSIRYFNTVEVEELVYKAIEGFRAGKKPGQDLFDKID----- 404

Query: 914  XDTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETRDGSVPEKVAVYQHANKEVAI 735
              TS+LNAHLK+LMPGLTAKVFRTYNASITLD IL++ET DG+V EK+AVYQ ANKEVAI
Sbjct: 405  --TSRLNAHLKDLMPGLTAKVFRTYNASITLDGILHEETEDGTVLEKIAVYQRANKEVAI 462

Query: 734  ICNHQRSVSKSHETQMSKLNEKINDLKTQREELTTDLSRAKLRKPPLEDKDGKPKKNLAP 555
            ICNHQRSVSKSHE+QM+++NEKI++LK+Q EEL  DL++AK  KP   D +GKPK+NLAP
Sbjct: 463  ICNHQRSVSKSHESQMTRMNEKIDELKSQMEELKADLNKAKKGKPLGYDSEGKPKRNLAP 522

Query: 554  QAIENKIAQLDAKIEKMEMDKQIKEDLKTVALGTSKINYLDLRISVAWCKRHEVPIEKIF 375
            +AI+ K+A L+ KIEKMEMDK+IKEDLKTVALGTSKINYLD RI+VAWCKRHEVPIEKIF
Sbjct: 523  EAIQKKVATLEGKIEKMEMDKRIKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIF 582

Query: 374  NKSLLAKFTWAMDVDPNFRF 315
            NKSLLAKF WAMDVDP FRF
Sbjct: 583  NKSLLAKFVWAMDVDPEFRF 602


>gb|ACL52396.1| unknown [Zea mays]
          Length = 574

 Score =  559 bits (1441), Expect = e-157
 Identities = 283/380 (74%), Positives = 317/380 (83%)
 Frame = -3

Query: 1454 CPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRLLKD 1275
            CPIPGE WKEVKHDNTVTWLAFWNDPINPK+FKYVFLAASSSLKGQSDKEKYEKSR LK 
Sbjct: 206  CPIPGESWKEVKHDNTVTWLAFWNDPINPKDFKYVFLAASSSLKGQSDKEKYEKSRKLKG 265

Query: 1274 YIQDIRANYTRDFNSKDPTKRQISVATYLIDKLALRAGNEKXXXXXXXXXDTVGCCTLKV 1095
            +IQ IR NYT+DF +KD T+RQI+VATYLIDKLALRAGNEK          TVGCCTLKV
Sbjct: 266  HIQRIRENYTKDFKNKDVTRRQIAVATYLIDKLALRAGNEKDDDEAD----TVGCCTLKV 321

Query: 1094 ENVELVPPNKLKFDFLGKDSIRYLNTVEVEPPVYTAIGDFRTAKKSNGSXXXXXXXXXXX 915
            +NV  +PPN+++FDFLGKDSIRY NTVEVE  VY AI  FR  KK               
Sbjct: 322  DNVTCMPPNQIQFDFLGKDSIRYFNTVEVEELVYKAIEGFRAGKKPGQDLFDKID----- 376

Query: 914  XDTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETRDGSVPEKVAVYQHANKEVAI 735
              TS+LNAHLK+LMPGLTAKVFRTYNASITLD IL++ET DG+V EK+AVYQ ANKEVAI
Sbjct: 377  --TSRLNAHLKDLMPGLTAKVFRTYNASITLDGILHEETEDGTVLEKIAVYQRANKEVAI 434

Query: 734  ICNHQRSVSKSHETQMSKLNEKINDLKTQREELTTDLSRAKLRKPPLEDKDGKPKKNLAP 555
            ICNHQRSVSKSHE+QM+++NEKI++LK+Q EEL  DL++AK  KP   D +GKPK+NLAP
Sbjct: 435  ICNHQRSVSKSHESQMTRMNEKIDELKSQMEELKADLNKAKKGKPLGYDSEGKPKRNLAP 494

Query: 554  QAIENKIAQLDAKIEKMEMDKQIKEDLKTVALGTSKINYLDLRISVAWCKRHEVPIEKIF 375
            +AI+ K+A L+ KIEKMEMDK+IKEDLKTVALGTSKINYLD RI+VAWCKRHEVPIEKIF
Sbjct: 495  EAIQKKVATLEGKIEKMEMDKRIKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIF 554

Query: 374  NKSLLAKFTWAMDVDPNFRF 315
            NKSLLAKF WAMDVDP FRF
Sbjct: 555  NKSLLAKFVWAMDVDPEFRF 574


>ref|XP_004972822.1| PREDICTED: DNA topoisomerase 1-like isoform X3 [Setaria italica]
          Length = 903

 Score =  559 bits (1440), Expect = e-156
 Identities = 285/380 (75%), Positives = 315/380 (82%)
 Frame = -3

Query: 1454 CPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRLLKD 1275
            CPIPGERWKEVKHDNTVTWLAFWNDPI+ K+FKYVFLAASSSLKGQSDKEKYEKSR LK 
Sbjct: 535  CPIPGERWKEVKHDNTVTWLAFWNDPISQKDFKYVFLAASSSLKGQSDKEKYEKSRKLKG 594

Query: 1274 YIQDIRANYTRDFNSKDPTKRQISVATYLIDKLALRAGNEKXXXXXXXXXDTVGCCTLKV 1095
            YIQDIR NYT+DF SKD  KRQI+VATYLIDKLALRAGNEK          TVGCCTLKV
Sbjct: 595  YIQDIRDNYTKDFRSKDVAKRQIAVATYLIDKLALRAGNEKDEDEAD----TVGCCTLKV 650

Query: 1094 ENVELVPPNKLKFDFLGKDSIRYLNTVEVEPPVYTAIGDFRTAKKSNGSXXXXXXXXXXX 915
            +NV  +PPNK++FDFLGKDSIRY NTVEVE  VY AI  FR  KK               
Sbjct: 651  DNVTCLPPNKIQFDFLGKDSIRYFNTVEVEELVYKAIEGFRAGKKPGKDLFDQLD----- 705

Query: 914  XDTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETRDGSVPEKVAVYQHANKEVAI 735
              T++LNAHLK+LMPGLTAKVFRTYNASITLD IL+KET DG++ EK+AVYQ ANKEVAI
Sbjct: 706  --TTRLNAHLKDLMPGLTAKVFRTYNASITLDGILHKETEDGTLLEKIAVYQRANKEVAI 763

Query: 734  ICNHQRSVSKSHETQMSKLNEKINDLKTQREELTTDLSRAKLRKPPLEDKDGKPKKNLAP 555
            ICNHQRSVSKSHE+QM++LNE+I+DLK QR+EL  DLS+AK  KP   DK+GK K+NLAP
Sbjct: 764  ICNHQRSVSKSHESQMTRLNERIDDLKAQRDELKVDLSKAKKGKPLGYDKEGKQKRNLAP 823

Query: 554  QAIENKIAQLDAKIEKMEMDKQIKEDLKTVALGTSKINYLDLRISVAWCKRHEVPIEKIF 375
             AIE KIA ++ KIEKMEM+K+ KEDLKTVALGTSKINYLD RI+VAWCKRHEVPIEKIF
Sbjct: 824  DAIEKKIAAIETKIEKMEMEKKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIF 883

Query: 374  NKSLLAKFTWAMDVDPNFRF 315
            NKSL+AKF WAMDVDP FRF
Sbjct: 884  NKSLVAKFGWAMDVDPEFRF 903


>dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]
          Length = 927

 Score =  559 bits (1440), Expect = e-156
 Identities = 286/381 (75%), Positives = 317/381 (83%), Gaps = 1/381 (0%)
 Frame = -3

Query: 1454 CPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRLLKD 1275
            CPIPGERWKEV++DNTVTWLAFW DPIN KEFKYVFLAASS+LKGQSDKEKYEK+RLLKD
Sbjct: 558  CPIPGERWKEVRNDNTVTWLAFWIDPINQKEFKYVFLAASSTLKGQSDKEKYEKARLLKD 617

Query: 1274 YIQDIRANYTRDF-NSKDPTKRQISVATYLIDKLALRAGNEKXXXXXXXXXDTVGCCTLK 1098
            YI  IRA YT+DF N+KDP K+QI+VATYLIDKLALRAGNEK          TVGCCTLK
Sbjct: 618  YIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEAD----TVGCCTLK 673

Query: 1097 VENVELVPPNKLKFDFLGKDSIRYLNTVEVEPPVYTAIGDFRTAKKSNGSXXXXXXXXXX 918
            VENVE VPPN LKFDFLGKDSIRY N V+VEP V+ AI  FR+ K+ +            
Sbjct: 674  VENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFDRLD---- 729

Query: 917  XXDTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETRDGSVPEKVAVYQHANKEVA 738
               TSKLNAHLKELMPGLTAKVFRTYNASITLD +L+KET+ G V EKV VYQHANKEVA
Sbjct: 730  ---TSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGEVAEKVVVYQHANKEVA 786

Query: 737  IICNHQRSVSKSHETQMSKLNEKINDLKTQREELTTDLSRAKLRKPPLEDKDGKPKKNLA 558
            IICNHQR+VSKSH  QMS+LNEKI++LKT  EEL TDLSR K  KPP +  DGKPK+NL 
Sbjct: 787  IICNHQRTVSKSHSAQMSRLNEKIDELKTAMEELKTDLSRVKKGKPPSKGADGKPKRNLN 846

Query: 557  PQAIENKIAQLDAKIEKMEMDKQIKEDLKTVALGTSKINYLDLRISVAWCKRHEVPIEKI 378
            P+A+E K+AQ++AKIEKME DK+ KEDLKTVALGTSKINYLD RI+VAWCKRHEVPIEKI
Sbjct: 847  PEALERKMAQINAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKI 906

Query: 377  FNKSLLAKFTWAMDVDPNFRF 315
            FNKSLLAKF W+MDVDP+FRF
Sbjct: 907  FNKSLLAKFAWSMDVDPSFRF 927


>ref|XP_002300344.1| DNA topoisomerase family protein [Populus trichocarpa]
            gi|222847602|gb|EEE85149.1| DNA topoisomerase family
            protein [Populus trichocarpa]
          Length = 877

 Score =  558 bits (1438), Expect = e-156
 Identities = 285/380 (75%), Positives = 310/380 (81%)
 Frame = -3

Query: 1454 CPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRLLKD 1275
            CPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEK+R LKD
Sbjct: 509  CPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKD 568

Query: 1274 YIQDIRANYTRDFNSKDPTKRQISVATYLIDKLALRAGNEKXXXXXXXXXDTVGCCTLKV 1095
            YI +IRA YT+DF SKD TKRQI+VATYLIDKLALRAGNEK          TVGCCTLKV
Sbjct: 569  YIHNIRAAYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEAD----TVGCCTLKV 624

Query: 1094 ENVELVPPNKLKFDFLGKDSIRYLNTVEVEPPVYTAIGDFRTAKKSNGSXXXXXXXXXXX 915
             NVE +PPNKLKFDFLGKDSIRY NTVEVE PVY AIG F+ AKK               
Sbjct: 625  ANVECIPPNKLKFDFLGKDSIRYENTVEVELPVYKAIGHFQVAKKQTDDLFDSLD----- 679

Query: 914  XDTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETRDGSVPEKVAVYQHANKEVAI 735
              TSKLNAHLKELMPGLTAKVFRTYNASITLD  L +ET DG V EK+ +Y  ANK+VAI
Sbjct: 680  --TSKLNAHLKELMPGLTAKVFRTYNASITLDEKLYEETEDGDVAEKIVIYNQANKQVAI 737

Query: 734  ICNHQRSVSKSHETQMSKLNEKINDLKTQREELTTDLSRAKLRKPPLEDKDGKPKKNLAP 555
            ICNHQR++SKSH+ QMS+L EKI +LK+  +EL TDL RAK  KPPL+  DGK K++L P
Sbjct: 738  ICNHQRTISKSHDAQMSRLTEKIEELKSTLKELKTDLDRAKKGKPPLKGADGKQKRSLTP 797

Query: 554  QAIENKIAQLDAKIEKMEMDKQIKEDLKTVALGTSKINYLDLRISVAWCKRHEVPIEKIF 375
            +AIE KIA  + KIEKMEM  + KEDLKTVALGTSKINYLD RI+VAWCKRHEVPI+KIF
Sbjct: 798  EAIEKKIATTNQKIEKMEMAMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIDKIF 857

Query: 374  NKSLLAKFTWAMDVDPNFRF 315
            NKSLLAKFTWAMDVDP FRF
Sbjct: 858  NKSLLAKFTWAMDVDPQFRF 877


>ref|XP_006659124.1| PREDICTED: DNA topoisomerase 1-like [Oryza brachyantha]
          Length = 911

 Score =  556 bits (1433), Expect = e-156
 Identities = 281/380 (73%), Positives = 316/380 (83%)
 Frame = -3

Query: 1454 CPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRLLKD 1275
            CPIPGE WKEVKHDNTVTWLAFWNDPI+ K+FKYVFLAASS+LKGQSDKEKYEKSR LK 
Sbjct: 543  CPIPGESWKEVKHDNTVTWLAFWNDPISQKDFKYVFLAASSALKGQSDKEKYEKSRKLKH 602

Query: 1274 YIQDIRANYTRDFNSKDPTKRQISVATYLIDKLALRAGNEKXXXXXXXXXDTVGCCTLKV 1095
            +I  IR  YT+DF SKD TK+QI+VATYLIDKLALRAGNEK          TVGCCTLKV
Sbjct: 603  HIHKIRDTYTKDFRSKDKTKKQIAVATYLIDKLALRAGNEKDDDEAE----TVGCCTLKV 658

Query: 1094 ENVELVPPNKLKFDFLGKDSIRYLNTVEVEPPVYTAIGDFRTAKKSNGSXXXXXXXXXXX 915
            +NV  VPPN L+FDFLGKDSIRY NTVEVE PVY AI +FR  KK               
Sbjct: 659  DNVTCVPPNNLQFDFLGKDSIRYFNTVEVELPVYKAIEEFRAGKKPGDDLFDKLD----- 713

Query: 914  XDTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETRDGSVPEKVAVYQHANKEVAI 735
              T++LNAHLK+LMPGLTAKVFRTYNASITLD IL+KET DG++ EK+AVYQ ANKEVAI
Sbjct: 714  --TTRLNAHLKDLMPGLTAKVFRTYNASITLDDILHKETEDGTLLEKIAVYQRANKEVAI 771

Query: 734  ICNHQRSVSKSHETQMSKLNEKINDLKTQREELTTDLSRAKLRKPPLEDKDGKPKKNLAP 555
            ICNHQRSVSKSH++QM++LNEKI++LK QR+EL  DLS+ K  K    DKDGKPK+NLAP
Sbjct: 772  ICNHQRSVSKSHDSQMTRLNEKIDELKAQRDELKADLSKVKKGKSLGYDKDGKPKRNLAP 831

Query: 554  QAIENKIAQLDAKIEKMEMDKQIKEDLKTVALGTSKINYLDLRISVAWCKRHEVPIEKIF 375
            +A E KI+Q++ KIEKMEMDK+IKEDLKTVALGTSKINYLD RI+VAWCKRHEVPIEKIF
Sbjct: 832  EAFEKKISQVETKIEKMEMDKKIKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIF 891

Query: 374  NKSLLAKFTWAMDVDPNFRF 315
            NKSL+AKF+WAMDVDP+FRF
Sbjct: 892  NKSLIAKFSWAMDVDPDFRF 911


>ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform X1 [Citrus sinensis]
            gi|568842074|ref|XP_006474978.1| PREDICTED: DNA
            topoisomerase 1-like isoform X2 [Citrus sinensis]
            gi|568842076|ref|XP_006474979.1| PREDICTED: DNA
            topoisomerase 1-like isoform X3 [Citrus sinensis]
            gi|568842078|ref|XP_006474980.1| PREDICTED: DNA
            topoisomerase 1-like isoform X4 [Citrus sinensis]
          Length = 902

 Score =  556 bits (1433), Expect = e-156
 Identities = 288/381 (75%), Positives = 313/381 (82%), Gaps = 1/381 (0%)
 Frame = -3

Query: 1454 CPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRLLKD 1275
            CPIPGE WKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEK+R LKD
Sbjct: 533  CPIPGESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKD 592

Query: 1274 YIQDIRANYTRDFNSKDPTKRQISVATYLIDKLALRAGNEKXXXXXXXXXDTVGCCTLKV 1095
            YI  IRA YT+DF S+D T+RQI+VATYLIDKLALRAGNEK         DTVGCCTLKV
Sbjct: 593  YIHSIRAAYTKDFVSRDGTRRQIAVATYLIDKLALRAGNEK----DDDEADTVGCCTLKV 648

Query: 1094 ENVELVPPNKLKFDFLGKDSIRYLNTVEVEPPVYTAIGDFRTAKKSNGSXXXXXXXXXXX 915
             NVE +PPNKLKFDFLGKDSI+Y+NTVEVE PVY AIG F+T KK N             
Sbjct: 649  GNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDD-------LFDK 701

Query: 914  XDTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETRDGSVPEKVAVYQHANKEVAI 735
             DT+KLNAHLKELMPGLTAKVFRTYNASITLD +LNK T DG V  K+ VYQ ANKEVAI
Sbjct: 702  LDTAKLNAHLKELMPGLTAKVFRTYNASITLDGMLNKGTGDGDVAVKIDVYQRANKEVAI 761

Query: 734  ICNHQRSVSKSHETQMSKLNEKINDLKTQREELTTDLSRAKLRKPPL-EDKDGKPKKNLA 558
            ICNHQR+VSK+H  QMS+L EKI DLK   ++L  DL RAK  KPPL +D DGK K+NLA
Sbjct: 762  ICNHQRTVSKTHSAQMSRLTEKIEDLKGVLKDLRVDLDRAKKGKPPLMKDSDGKRKRNLA 821

Query: 557  PQAIENKIAQLDAKIEKMEMDKQIKEDLKTVALGTSKINYLDLRISVAWCKRHEVPIEKI 378
            P+A+E K+AQ +AKIEKME D + KEDLKTVALGTSKINYLD RI+VAWCKRHEVPIEKI
Sbjct: 822  PEALERKMAQTNAKIEKMERDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKI 881

Query: 377  FNKSLLAKFTWAMDVDPNFRF 315
            FNKSLLAKF WAMDVDP FRF
Sbjct: 882  FNKSLLAKFAWAMDVDPEFRF 902


>ref|NP_001157806.1| topoisomerase I [Zea mays] gi|240065169|gb|ACS44671.1| DNA
            topoisomerase I [Zea mays]
          Length = 904

 Score =  556 bits (1433), Expect = e-156
 Identities = 282/380 (74%), Positives = 316/380 (83%)
 Frame = -3

Query: 1454 CPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRLLKD 1275
            CPIPGE WKEVKHDNTVTWLAFWNDPINPK+FKYVFLAASSSLKGQSDKEKYEKSR LK 
Sbjct: 536  CPIPGESWKEVKHDNTVTWLAFWNDPINPKDFKYVFLAASSSLKGQSDKEKYEKSRKLKG 595

Query: 1274 YIQDIRANYTRDFNSKDPTKRQISVATYLIDKLALRAGNEKXXXXXXXXXDTVGCCTLKV 1095
            +IQ IR NYT+DF +KD T+RQI+VATYLIDKLALRAGNEK          TVGCCTLKV
Sbjct: 596  HIQRIRENYTKDFKNKDVTRRQIAVATYLIDKLALRAGNEKDDDEAD----TVGCCTLKV 651

Query: 1094 ENVELVPPNKLKFDFLGKDSIRYLNTVEVEPPVYTAIGDFRTAKKSNGSXXXXXXXXXXX 915
            +NV  +PPN+++FDFLGKDSIRY NTVEVE  VY AI  FR  KK               
Sbjct: 652  DNVTCMPPNQIQFDFLGKDSIRYFNTVEVEELVYKAIEGFRAGKKPGQDLFDKID----- 706

Query: 914  XDTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETRDGSVPEKVAVYQHANKEVAI 735
              TS+LNAHLK+LMPGLTAKVFRTYNASITLD IL++ET DG+V EK+AVYQ ANKEVAI
Sbjct: 707  --TSRLNAHLKDLMPGLTAKVFRTYNASITLDGILHEETEDGTVLEKIAVYQRANKEVAI 764

Query: 734  ICNHQRSVSKSHETQMSKLNEKINDLKTQREELTTDLSRAKLRKPPLEDKDGKPKKNLAP 555
            ICN QRSVSKSHE+QM+++NEKI++LK+Q EEL  DL++AK  KP   D +GKPK+NLAP
Sbjct: 765  ICNQQRSVSKSHESQMTRMNEKIDELKSQMEELKADLNKAKKGKPLGYDSEGKPKRNLAP 824

Query: 554  QAIENKIAQLDAKIEKMEMDKQIKEDLKTVALGTSKINYLDLRISVAWCKRHEVPIEKIF 375
            +AI+ K+A L+ KIEKMEMDK+IKEDLKTVALGTSKINYLD RI+VAWCKRHEVPIEKIF
Sbjct: 825  EAIQKKVATLEGKIEKMEMDKRIKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIF 884

Query: 374  NKSLLAKFTWAMDVDPNFRF 315
            NKSLLAKF WAMDVDP FRF
Sbjct: 885  NKSLLAKFVWAMDVDPEFRF 904


>ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citrus clementina]
            gi|567920950|ref|XP_006452481.1| hypothetical protein
            CICLE_v10007398mg [Citrus clementina]
            gi|557555705|gb|ESR65719.1| hypothetical protein
            CICLE_v10007398mg [Citrus clementina]
            gi|557555707|gb|ESR65721.1| hypothetical protein
            CICLE_v10007398mg [Citrus clementina]
          Length = 902

 Score =  555 bits (1430), Expect = e-155
 Identities = 287/381 (75%), Positives = 313/381 (82%), Gaps = 1/381 (0%)
 Frame = -3

Query: 1454 CPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRLLKD 1275
            CPIPGE WKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSD+EKYEK+R LKD
Sbjct: 533  CPIPGESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDREKYEKARKLKD 592

Query: 1274 YIQDIRANYTRDFNSKDPTKRQISVATYLIDKLALRAGNEKXXXXXXXXXDTVGCCTLKV 1095
            YI  IRA YT+DF S+D T+RQI+VATYLIDKLALRAGNEK         DTVGCCTLKV
Sbjct: 593  YIHSIRAAYTKDFVSRDGTRRQIAVATYLIDKLALRAGNEK----DDDEADTVGCCTLKV 648

Query: 1094 ENVELVPPNKLKFDFLGKDSIRYLNTVEVEPPVYTAIGDFRTAKKSNGSXXXXXXXXXXX 915
             NVE +PPNKLKFDFLGKDSI+Y+NTVEVE PVY AIG F+T KK N             
Sbjct: 649  GNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDD-------LFDK 701

Query: 914  XDTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETRDGSVPEKVAVYQHANKEVAI 735
             DT+KLNAHLKELMPGLTAKVFRTYNASITLD +LNK T DG V  K+ VYQ ANKEVAI
Sbjct: 702  LDTAKLNAHLKELMPGLTAKVFRTYNASITLDGMLNKGTGDGDVAVKIDVYQRANKEVAI 761

Query: 734  ICNHQRSVSKSHETQMSKLNEKINDLKTQREELTTDLSRAKLRKPPL-EDKDGKPKKNLA 558
            ICNHQR+VSK+H  QMS+L EKI DLK   ++L  DL RAK  KPPL +D DGK K+NLA
Sbjct: 762  ICNHQRTVSKTHSAQMSRLTEKIEDLKGVLKDLRVDLDRAKKGKPPLMKDSDGKRKRNLA 821

Query: 557  PQAIENKIAQLDAKIEKMEMDKQIKEDLKTVALGTSKINYLDLRISVAWCKRHEVPIEKI 378
            P+A+E K+AQ +AKIEKME D + KEDLKTVALGTSKINYLD RI+VAWCKRHEVPIEKI
Sbjct: 822  PEALERKMAQTNAKIEKMERDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKI 881

Query: 377  FNKSLLAKFTWAMDVDPNFRF 315
            FNKSLLAKF WAMDVDP FRF
Sbjct: 882  FNKSLLAKFAWAMDVDPEFRF 902


>ref|XP_002317355.1| DNA topoisomerase family protein [Populus trichocarpa]
            gi|222860420|gb|EEE97967.1| DNA topoisomerase family
            protein [Populus trichocarpa]
          Length = 860

 Score =  554 bits (1427), Expect = e-155
 Identities = 283/380 (74%), Positives = 306/380 (80%)
 Frame = -3

Query: 1454 CPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRLLKD 1275
            CPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEK+R LKD
Sbjct: 492  CPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKD 551

Query: 1274 YIQDIRANYTRDFNSKDPTKRQISVATYLIDKLALRAGNEKXXXXXXXXXDTVGCCTLKV 1095
            YI +IR  YT+DF SKD TKRQI+VATYLIDKLALRAGNEK          TVGCCTLKV
Sbjct: 552  YIHNIRTAYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEAD----TVGCCTLKV 607

Query: 1094 ENVELVPPNKLKFDFLGKDSIRYLNTVEVEPPVYTAIGDFRTAKKSNGSXXXXXXXXXXX 915
             NVE +PPNKLKFDFLGKDSIRY NTVEVE PVY AI  F+ AKK               
Sbjct: 608  ANVECIPPNKLKFDFLGKDSIRYENTVEVELPVYKAIRQFQVAKKPTDDLFDSLD----- 662

Query: 914  XDTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETRDGSVPEKVAVYQHANKEVAI 735
              TSKLNAHLKELMPGLTAKVFRTYNASITLD  L +ET DG V EK  +Y  ANK+VAI
Sbjct: 663  --TSKLNAHLKELMPGLTAKVFRTYNASITLDEKLYEETEDGDVAEKFVIYNQANKQVAI 720

Query: 734  ICNHQRSVSKSHETQMSKLNEKINDLKTQREELTTDLSRAKLRKPPLEDKDGKPKKNLAP 555
            ICNHQR++SKSH+ QMS+L EK+ +LK   +E  TDL RAK  KPPL+D DGK K+NL P
Sbjct: 721  ICNHQRTISKSHDAQMSRLTEKLEELKGTLKEFKTDLDRAKKGKPPLKDADGKQKRNLTP 780

Query: 554  QAIENKIAQLDAKIEKMEMDKQIKEDLKTVALGTSKINYLDLRISVAWCKRHEVPIEKIF 375
            +AIE KIA  + KIEKME+  + KEDLKTVALGTSKINYLD RI+VAWCKRHEVPIEKIF
Sbjct: 781  EAIEKKIATTNQKIEKMELSMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIF 840

Query: 374  NKSLLAKFTWAMDVDPNFRF 315
            NKSLLAKFTWAMDVDP FRF
Sbjct: 841  NKSLLAKFTWAMDVDPQFRF 860


>dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]
          Length = 925

 Score =  553 bits (1426), Expect = e-155
 Identities = 284/381 (74%), Positives = 314/381 (82%), Gaps = 1/381 (0%)
 Frame = -3

Query: 1454 CPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRLLKD 1275
            CPIPGERWKEV++ NTVTWLA+WNDPIN KEFKYVFLAASS+LKGQSDKEKYEK+RLLKD
Sbjct: 556  CPIPGERWKEVRNGNTVTWLAYWNDPINQKEFKYVFLAASSTLKGQSDKEKYEKARLLKD 615

Query: 1274 YIQDIRANYTRDF-NSKDPTKRQISVATYLIDKLALRAGNEKXXXXXXXXXDTVGCCTLK 1098
            YI  IRA YT+DF N+KDP K+QI+VATYLIDKLALRAGNEK          TVGCCTLK
Sbjct: 616  YIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEAD----TVGCCTLK 671

Query: 1097 VENVELVPPNKLKFDFLGKDSIRYLNTVEVEPPVYTAIGDFRTAKKSNGSXXXXXXXXXX 918
            VENVE VPPN LKFDFLGKDSIRY N V+VEP V+ AI  FR+ K+ +            
Sbjct: 672  VENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFDRLD---- 727

Query: 917  XXDTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETRDGSVPEKVAVYQHANKEVA 738
               TSKLNAHLKELMPGLTAKVFRTYNASITLD +L+KET+ G V E V VYQHANKEVA
Sbjct: 728  ---TSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGEVAENVVVYQHANKEVA 784

Query: 737  IICNHQRSVSKSHETQMSKLNEKINDLKTQREELTTDLSRAKLRKPPLEDKDGKPKKNLA 558
            IICNHQR+VSKSH  QMS+LNEKI++LKT  EEL TDLSRAK  KPP +  DGK K+NL 
Sbjct: 785  IICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPTKGADGKAKRNLN 844

Query: 557  PQAIENKIAQLDAKIEKMEMDKQIKEDLKTVALGTSKINYLDLRISVAWCKRHEVPIEKI 378
            P+A+E KI Q +AKIEKME DK+ KEDLKTVALGTSKINYLD RI+VAWCKRHEVPIEKI
Sbjct: 845  PEALERKITQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKI 904

Query: 377  FNKSLLAKFTWAMDVDPNFRF 315
            FNKSLLAKF W+MDVDP+FRF
Sbjct: 905  FNKSLLAKFAWSMDVDPSFRF 925


>ref|NP_001061015.1| Os08g0154600 [Oryza sativa Japonica Group]
            gi|27817923|dbj|BAC55688.1| putative DNA topoisomerase I
            [Oryza sativa Japonica Group]
            gi|113622984|dbj|BAF22929.1| Os08g0154600 [Oryza sativa
            Japonica Group] gi|222639933|gb|EEE68065.1| hypothetical
            protein OsJ_26075 [Oryza sativa Japonica Group]
          Length = 916

 Score =  553 bits (1425), Expect = e-155
 Identities = 279/380 (73%), Positives = 316/380 (83%)
 Frame = -3

Query: 1454 CPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRLLKD 1275
            CPIPGE WKEVKHDNTVTWLAFWNDPI+ K+FKYVFLAASS+LKGQSDKEKYEKSR LK 
Sbjct: 548  CPIPGESWKEVKHDNTVTWLAFWNDPISQKDFKYVFLAASSALKGQSDKEKYEKSRKLKH 607

Query: 1274 YIQDIRANYTRDFNSKDPTKRQISVATYLIDKLALRAGNEKXXXXXXXXXDTVGCCTLKV 1095
            ++  IR  YT+DF SKD TK+QI+VATYLIDKLALRAGNEK          TVGCCTLKV
Sbjct: 608  HVHKIRDTYTKDFRSKDKTKKQIAVATYLIDKLALRAGNEKDEDEAE----TVGCCTLKV 663

Query: 1094 ENVELVPPNKLKFDFLGKDSIRYLNTVEVEPPVYTAIGDFRTAKKSNGSXXXXXXXXXXX 915
            +NV  VPPNKL+FDFLGKDSIRY NTVEVE  VY AI +FR  KK               
Sbjct: 664  DNVTCVPPNKLQFDFLGKDSIRYFNTVEVELLVYKAIEEFRAGKKPGQDLFDKLD----- 718

Query: 914  XDTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETRDGSVPEKVAVYQHANKEVAI 735
              T++LNAHLK+LMPGLTAKVFRTYNASITLD IL+KET DG++ EK+AVYQ ANKEVAI
Sbjct: 719  --TTRLNAHLKDLMPGLTAKVFRTYNASITLDDILHKETEDGTLLEKIAVYQRANKEVAI 776

Query: 734  ICNHQRSVSKSHETQMSKLNEKINDLKTQREELTTDLSRAKLRKPPLEDKDGKPKKNLAP 555
            ICNHQRSVSKSH++QM++LNEKI++LK QR+EL  DLS+ +  K    DKDGKPK+NLAP
Sbjct: 777  ICNHQRSVSKSHDSQMTRLNEKIDELKAQRDELKADLSKVRKGKNLGNDKDGKPKRNLAP 836

Query: 554  QAIENKIAQLDAKIEKMEMDKQIKEDLKTVALGTSKINYLDLRISVAWCKRHEVPIEKIF 375
            +A E KI+Q++ KIEKMEMDK+IKEDLKTVALGTSKINYLD RI+VAWCKRHEVPIEKIF
Sbjct: 837  EAFEKKISQIETKIEKMEMDKKIKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIF 896

Query: 374  NKSLLAKFTWAMDVDPNFRF 315
            NKSL+AKF+WAMDVDP+FRF
Sbjct: 897  NKSLIAKFSWAMDVDPDFRF 916


>gb|EAZ05628.1| hypothetical protein OsI_27847 [Oryza sativa Indica Group]
          Length = 916

 Score =  553 bits (1425), Expect = e-155
 Identities = 279/380 (73%), Positives = 316/380 (83%)
 Frame = -3

Query: 1454 CPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRLLKD 1275
            CPIPGE WKEVKHDNTVTWLAFWNDPI+ K+FKYVFLAASS+LKGQSDKEKYEKSR LK 
Sbjct: 548  CPIPGESWKEVKHDNTVTWLAFWNDPISQKDFKYVFLAASSALKGQSDKEKYEKSRKLKH 607

Query: 1274 YIQDIRANYTRDFNSKDPTKRQISVATYLIDKLALRAGNEKXXXXXXXXXDTVGCCTLKV 1095
            ++  IR  YT+DF SKD TK+QI+VATYLIDKLALRAGNEK          TVGCCTLKV
Sbjct: 608  HVHKIRDTYTKDFRSKDKTKKQIAVATYLIDKLALRAGNEKDEDEAE----TVGCCTLKV 663

Query: 1094 ENVELVPPNKLKFDFLGKDSIRYLNTVEVEPPVYTAIGDFRTAKKSNGSXXXXXXXXXXX 915
            +NV  VPPNKL+FDFLGKDSIRY NTVEVE  VY AI +FR  KK               
Sbjct: 664  DNVTCVPPNKLQFDFLGKDSIRYFNTVEVELLVYKAIEEFRAGKKPGQDLFDKLD----- 718

Query: 914  XDTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETRDGSVPEKVAVYQHANKEVAI 735
              T++LNAHLK+LMPGLTAKVFRTYNASITLD IL+KET DG++ EK+AVYQ ANKEVAI
Sbjct: 719  --TTRLNAHLKDLMPGLTAKVFRTYNASITLDDILHKETEDGTLLEKIAVYQRANKEVAI 776

Query: 734  ICNHQRSVSKSHETQMSKLNEKINDLKTQREELTTDLSRAKLRKPPLEDKDGKPKKNLAP 555
            ICNHQRSVSKSH++QM++LNEKI++LK QR+EL  DLS+ +  K    DKDGKPK+NLAP
Sbjct: 777  ICNHQRSVSKSHDSQMTRLNEKIDELKAQRDELKADLSKVRKGKNLGNDKDGKPKRNLAP 836

Query: 554  QAIENKIAQLDAKIEKMEMDKQIKEDLKTVALGTSKINYLDLRISVAWCKRHEVPIEKIF 375
            +A E KI+Q++ KIEKMEMDK+IKEDLKTVALGTSKINYLD RI+VAWCKRHEVPIEKIF
Sbjct: 837  EAFEKKISQIETKIEKMEMDKKIKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIF 896

Query: 374  NKSLLAKFTWAMDVDPNFRF 315
            NKSL+AKF+WAMDVDP+FRF
Sbjct: 897  NKSLIAKFSWAMDVDPDFRF 916


>ref|XP_002443872.1| hypothetical protein SORBIDRAFT_07g003610 [Sorghum bicolor]
            gi|241940222|gb|EES13367.1| hypothetical protein
            SORBIDRAFT_07g003610 [Sorghum bicolor]
          Length = 921

 Score =  552 bits (1423), Expect = e-154
 Identities = 281/380 (73%), Positives = 316/380 (83%)
 Frame = -3

Query: 1454 CPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRLLKD 1275
            CPIPGE WKE+KHDNTVTWLAFWNDPI+ K+FKYVFLAASSSLKGQSDKEKYEKSR LK 
Sbjct: 553  CPIPGESWKEIKHDNTVTWLAFWNDPISQKDFKYVFLAASSSLKGQSDKEKYEKSRKLKG 612

Query: 1274 YIQDIRANYTRDFNSKDPTKRQISVATYLIDKLALRAGNEKXXXXXXXXXDTVGCCTLKV 1095
            +IQ IR NYT+DF +KD T+RQI+VATYLIDKLALRAGNEK          TVGCCTLKV
Sbjct: 613  HIQRIRENYTKDFKNKDVTRRQIAVATYLIDKLALRAGNEKDDDEAD----TVGCCTLKV 668

Query: 1094 ENVELVPPNKLKFDFLGKDSIRYLNTVEVEPPVYTAIGDFRTAKKSNGSXXXXXXXXXXX 915
            +NV  +PPNK++FDFLGKDSIRY NTVEVE  VY AI  FR  KK               
Sbjct: 669  DNVTCMPPNKIQFDFLGKDSIRYFNTVEVEELVYKAIEGFRAGKKPGEGLFDKID----- 723

Query: 914  XDTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETRDGSVPEKVAVYQHANKEVAI 735
              T++LNAHLK+LMPGLTAKVFRTYNASITLD IL++ET DG++ EK+AVYQ ANKEVAI
Sbjct: 724  --TTRLNAHLKDLMPGLTAKVFRTYNASITLDGILHEETEDGTLLEKIAVYQRANKEVAI 781

Query: 734  ICNHQRSVSKSHETQMSKLNEKINDLKTQREELTTDLSRAKLRKPPLEDKDGKPKKNLAP 555
            ICNHQRSVSKSHE+QM KLNEKI++LK+Q EEL  DLS+AK  KP   DK+GK K+NLAP
Sbjct: 782  ICNHQRSVSKSHESQMIKLNEKIDELKSQMEELKADLSKAKKGKPLGYDKEGKQKRNLAP 841

Query: 554  QAIENKIAQLDAKIEKMEMDKQIKEDLKTVALGTSKINYLDLRISVAWCKRHEVPIEKIF 375
            +AIE KIA ++ KI+KMEMDK+IKEDLKTVALGTSKINYLD RI+VAWCKRHEVPIEKIF
Sbjct: 842  EAIEKKIAMVEGKIDKMEMDKKIKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIF 901

Query: 374  NKSLLAKFTWAMDVDPNFRF 315
            NKSL+AKF WAMDVDP+FRF
Sbjct: 902  NKSLIAKFGWAMDVDPDFRF 921


>dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]
          Length = 894

 Score =  551 bits (1419), Expect = e-154
 Identities = 279/380 (73%), Positives = 312/380 (82%)
 Frame = -3

Query: 1454 CPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRLLKD 1275
            CPIPGE WKE++HDNTVTWLAFWNDPI P+EFKYVFLAASSSLKGQSDKEKYEK+RLLKD
Sbjct: 526  CPIPGESWKEIRHDNTVTWLAFWNDPIKPREFKYVFLAASSSLKGQSDKEKYEKARLLKD 585

Query: 1274 YIQDIRANYTRDFNSKDPTKRQISVATYLIDKLALRAGNEKXXXXXXXXXDTVGCCTLKV 1095
            +IQ IRA YT+DF SKD TKRQI+VATYLIDKLALRAGNEK          TVGCCTLKV
Sbjct: 586  FIQGIRAAYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEAD----TVGCCTLKV 641

Query: 1094 ENVELVPPNKLKFDFLGKDSIRYLNTVEVEPPVYTAIGDFRTAKKSNGSXXXXXXXXXXX 915
            ENVE  PP+ LKFDFLGKDSIRY N VEVE PVY AI  FRT K+               
Sbjct: 642  ENVEPKPPSILKFDFLGKDSIRYQNEVEVELPVYKAIQQFRTGKRGGDDLFDKLD----- 696

Query: 914  XDTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETRDGSVPEKVAVYQHANKEVAI 735
              TSKLNAHLK LMPGLTAKVFRTYNASITLD +L++ET+ G+V EK+ VYQHANKEVAI
Sbjct: 697  --TSKLNAHLKGLMPGLTAKVFRTYNASITLDEMLSRETKGGNVAEKIVVYQHANKEVAI 754

Query: 734  ICNHQRSVSKSHETQMSKLNEKINDLKTQREELTTDLSRAKLRKPPLEDKDGKPKKNLAP 555
            ICNHQR+VSKSH  QM++LN KI++LK   + L TDL+RAK  KPPLED DGKPK+NL P
Sbjct: 755  ICNHQRTVSKSHPAQMTRLNGKIDELKGILDGLQTDLARAKKGKPPLEDADGKPKRNLTP 814

Query: 554  QAIENKIAQLDAKIEKMEMDKQIKEDLKTVALGTSKINYLDLRISVAWCKRHEVPIEKIF 375
            +A+E KI Q +AKIEKME DK+ KE LKT+ALGTSKI+YLD RI+VAWCKRHEVPIEK+F
Sbjct: 815  EALERKIGQTNAKIEKMERDKETKEGLKTIALGTSKISYLDPRITVAWCKRHEVPIEKVF 874

Query: 374  NKSLLAKFTWAMDVDPNFRF 315
            NKSLLAKF W+MDVDP+FRF
Sbjct: 875  NKSLLAKFAWSMDVDPSFRF 894


>gb|EMJ02410.1| hypothetical protein PRUPE_ppa001622mg [Prunus persica]
          Length = 790

 Score =  550 bits (1417), Expect = e-154
 Identities = 280/380 (73%), Positives = 313/380 (82%)
 Frame = -3

Query: 1454 CPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRLLKD 1275
            CPIPGE WKEV+HDNTVTWLAFWNDPIN +EFKYVFLA SSSLKGQSDKEKYEK+R+LKD
Sbjct: 422  CPIPGESWKEVRHDNTVTWLAFWNDPINQREFKYVFLAPSSSLKGQSDKEKYEKARMLKD 481

Query: 1274 YIQDIRANYTRDFNSKDPTKRQISVATYLIDKLALRAGNEKXXXXXXXXXDTVGCCTLKV 1095
            YI +IRA YTRDF SKD TKRQI+VATYLIDKLALRAGNEK          TVGCCTLKV
Sbjct: 482  YIGNIRAAYTRDFTSKDGTKRQIAVATYLIDKLALRAGNEKDDDEAD----TVGCCTLKV 537

Query: 1094 ENVELVPPNKLKFDFLGKDSIRYLNTVEVEPPVYTAIGDFRTAKKSNGSXXXXXXXXXXX 915
            ENV+ + PN L+F+FLGKDSIRY NTVEVE PVY AI  F+T K+               
Sbjct: 538  ENVKAIAPNSLEFNFLGKDSIRYENTVEVEIPVYKAIIQFQTGKRG-------CDDLFDR 590

Query: 914  XDTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETRDGSVPEKVAVYQHANKEVAI 735
             DTSKLNAHLKELMPGLTAKVFRTYNASITLD ILNKET++G + EKV VYQHANKEVAI
Sbjct: 591  LDTSKLNAHLKELMPGLTAKVFRTYNASITLDNILNKETKEGDLSEKVVVYQHANKEVAI 650

Query: 734  ICNHQRSVSKSHETQMSKLNEKINDLKTQREELTTDLSRAKLRKPPLEDKDGKPKKNLAP 555
            ICNHQR++SK+H  QMS+L EKI +L++  +EL TDL RAK  +PPL+D DGK K+NL P
Sbjct: 651  ICNHQRTISKTHSAQMSRLLEKIGNLQSILKELKTDLDRAKKGRPPLKDADGKQKRNLTP 710

Query: 554  QAIENKIAQLDAKIEKMEMDKQIKEDLKTVALGTSKINYLDLRISVAWCKRHEVPIEKIF 375
            +A+E KIAQ   KIEKME+D + KEDLKTVALGTSKINYLD RI+VAWCKRHEVPIEKIF
Sbjct: 711  EALERKIAQTTVKIEKMELDMRTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIF 770

Query: 374  NKSLLAKFTWAMDVDPNFRF 315
            NKSLLAKF W+MDVDP+FRF
Sbjct: 771  NKSLLAKFAWSMDVDPDFRF 790