BLASTX nr result

ID: Zingiber23_contig00017194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00017194
         (996 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004238490.1| PREDICTED: uncharacterized protein LOC101253...    68   5e-09
ref|XP_001769619.1| predicted protein [Physcomitrella patens] gi...    59   2e-06

>ref|XP_004238490.1| PREDICTED: uncharacterized protein LOC101253281 [Solanum
           lycopersicum]
          Length = 1815

 Score = 68.2 bits (165), Expect = 5e-09
 Identities = 64/260 (24%), Positives = 109/260 (41%), Gaps = 7/260 (2%)
 Frame = -2

Query: 875 VDYESKPRRELQALCKQHGLPANLTNARMAENLASLLQANSEEIKPKG--CLKXXXXXXX 702
           +D+E+  R++LQALCK+HG+PANLTN  MA  L+SLL+ N E+   +G  CLK       
Sbjct: 1   MDFENMKRKQLQALCKEHGIPANLTNLEMANKLSSLLKVNDEKPLTRGRSCLKMLDENES 60

Query: 701 XXXXGRLLPKKVSFSLHEVGVRALPEXXXXXXRKSVVGFAPKEVTEGASEAKIELEVRKT 522
                ++  KKV FS                           EV E    A+++   R+ 
Sbjct: 61  DAVNRKV--KKVKFS------------------------PDNEVIEFTRSAQVKRGGRRN 94

Query: 521 SKRYHCTSPDRN-----GEDDLATNFPCPGGIPLDEKHDGAVPITRNLRSRVITVEGSKA 357
           +  Y      R+     G  D         G+ +++        TR ++  VI+V  SK 
Sbjct: 95  TMLYKNNLNVRSDGLKVGILDSPVRVTRSQGVNIEDGVTEKKGRTRQVKDSVISVNKSKD 154

Query: 356 LQGDIKVPRRIVTRSNRKKAQVEVVASIPEVHSEEMKSSSDDGLVNKGRSKRQKCGNATV 177
             G       + T+   K  +V ++     +   E    ++DG+    R + +K    +V
Sbjct: 155 KVG-------VTTKRTLKNKEVGII-----LEKREENEGANDGVRMSRRVRSRKNAKESV 202

Query: 176 KIDERHDNFTKSQNLLNRQE 117
           +  +      +S+  ++R+E
Sbjct: 203 EDSQEELKMDESEKAIDREE 222


>ref|XP_001769619.1| predicted protein [Physcomitrella patens]
           gi|162679161|gb|EDQ65612.1| predicted protein
           [Physcomitrella patens]
          Length = 411

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 27/47 (57%), Positives = 38/47 (80%)
 Frame = -2

Query: 875 VDYESKPRRELQALCKQHGLPANLTNARMAENLASLLQANSEEIKPK 735
           ++Y+   RRELQALCK+HGLPAN TNA MA++LASLL  +++ I+ +
Sbjct: 1   MNYDELTRRELQALCKEHGLPANKTNAVMADSLASLLSDSNQSIRTR 47


Top