BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00017027
         (1996 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7XZF7.2|GYRA_ORYSJ RecName: Full=Probable DNA gyrase subunit...   827   0.0  
gb|AAP73860.1| putative DNA gyrase subunit [Oryza sativa Japonic...   827   0.0  
gb|AFW67221.1| hypothetical protein ZEAMMB73_149484 [Zea mays]        812   0.0  
ref|XP_006651950.1| PREDICTED: probable DNA gyrase subunit A, ch...   811   0.0  
ref|XP_004981303.1| PREDICTED: probable DNA gyrase subunit A, ch...   808   0.0  
gb|AFW67220.1| hypothetical protein ZEAMMB73_149484 [Zea mays]        808   0.0  
ref|XP_003559252.1| PREDICTED: probable DNA gyrase subunit A, ch...   803   0.0  
ref|XP_002271674.2| PREDICTED: DNA gyrase subunit A, chloroplast...   799   0.0  
emb|CBI29133.3| unnamed protein product [Vitis vinifera]              799   0.0  
ref|XP_006829870.1| hypothetical protein AMTR_s00119p00135690 [A...   786   0.0  
gb|EOY19461.1| DNA gyrase subunit A [Theobroma cacao]                 786   0.0  
ref|XP_002315402.2| DNA gyrase subunit A family protein [Populus...   782   0.0  
gb|EMT22178.1| Putative DNA gyrase subunit A, chloroplastic/mito...   778   0.0  
ref|XP_006485535.1| PREDICTED: DNA gyrase subunit A, chloroplast...   776   0.0  
sp|Q5YLB5.1|GYRA_NICBE RecName: Full=DNA gyrase subunit A, chlor...   774   0.0  
ref|XP_004308178.1| PREDICTED: DNA gyrase subunit A, chloroplast...   773   0.0  
ref|XP_006296680.1| hypothetical protein CARUB_v10012909mg [Caps...   769   0.0  
ref|XP_004146774.1| PREDICTED: DNA gyrase subunit A, chloroplast...   765   0.0  
gb|ESW25277.1| hypothetical protein PHAVU_003G022300g [Phaseolus...   765   0.0  
ref|XP_006587249.1| PREDICTED: DNA gyrase subunit A, chloroplast...   764   0.0  

>sp|Q7XZF7.2|GYRA_ORYSJ RecName: Full=Probable DNA gyrase subunit A,
            chloroplastic/mitochondrial; Flags: Precursor
          Length = 939

 Score =  827 bits (2135), Expect = 0.0
 Identities = 433/587 (73%), Positives = 498/587 (84%), Gaps = 1/587 (0%)
 Frame = -3

Query: 1994 IKEIPYQTNKSALVEKIAELVEQKILDGISDIRDESDRFGMRVVIELKRGSDPSIVLNNL 1815
            IKE+PYQTNKS LVE+IAELVE+K+L+GISDIRDESDR GMRVVIELKRG+DP+IVLNNL
Sbjct: 339  IKEVPYQTNKSTLVERIAELVEEKVLEGISDIRDESDRSGMRVVIELKRGADPAIVLNNL 398

Query: 1814 YRHTALQSSFSCNMVGILDGQPKLMGLKELLQAFLDFRSSVIERRAAFKLSQALERKHII 1635
            YRHTALQSSFSCNMV ILDGQPKLMGLKE+LQAF+DFR SVIERRA FKLSQALERKHI+
Sbjct: 399  YRHTALQSSFSCNMVAILDGQPKLMGLKEILQAFIDFRCSVIERRARFKLSQALERKHIV 458

Query: 1634 EGIIIGLDNLDAIINIIRKTSSNTLAITSLVKEYHLSEKQAEAXXXXXXXXXXXXXXXKF 1455
            EGI+IGLDNLD++I IIR TS++ +A  SL+KE+ LS+KQAEA               KF
Sbjct: 459  EGIVIGLDNLDSVIQIIRGTSNHAMARESLIKEFGLSDKQAEALLDITLRKLTSLERKKF 518

Query: 1454 VDEAESLSDQIXXXXXXXXXXXLIFQLIEKEAIELKHKFGSPRRSFIEYSGSSQLEEIDV 1275
            VDEA+SLS++I           LIFQLI +EA +LK+KF +PRRSFIE S S++++++D+
Sbjct: 519  VDEAKSLSEEISKLNELLSNKKLIFQLILQEATDLKNKFATPRRSFIEDSASTEVDDLDI 578

Query: 1274 IPNVEMLLTLSEKGYLKRMKPNTFTLQHRGTIGKSVGKMRVNDLMSDFIVCHTHDHILYF 1095
            IPN EMLL LSEKGY+KRMKPNTF LQ+RGTIGKSVGKMR+ND  SDFIVC THDH+LYF
Sbjct: 579  IPNEEMLLILSEKGYVKRMKPNTFNLQNRGTIGKSVGKMRMNDNTSDFIVCQTHDHVLYF 638

Query: 1094 SDKGIVYSARAYKIPECSRTATGTPLVQLLSLSEGERITSIVPVSEFIDDQYLVMLTLNG 915
            SDKGIVYSARAYKIPEC+R ATGTPLVQLLSLS+GERITSIVPV+EF +DQYLVMLT+NG
Sbjct: 639  SDKGIVYSARAYKIPECTRAATGTPLVQLLSLSDGERITSIVPVNEFGEDQYLVMLTVNG 698

Query: 914  YIKKVSLKAFSAIRPSGIIAIQLVAGDELKWVRLCADADLVALASQKGMVIVNFCSKLRA 735
            YIKKV L AFSAIR SGII+IQL  GDELKWVR C D DLVALASQ GMVIVN C+KLRA
Sbjct: 699  YIKKVPLNAFSAIRTSGIISIQLAPGDELKWVRRCGDDDLVALASQNGMVIVNTCNKLRA 758

Query: 734  LGRKTRGVISMKLK-GDKMASMDVIPASIQKDLQKLSENIYSRGKDLGPPWLLFVSESGH 558
            LGRKTRGV++MKLK GDKMASMD+IPA+            YSR +DL PPWLLF++++G 
Sbjct: 759  LGRKTRGVLAMKLKEGDKMASMDIIPATSHN-----MPETYSRVRDLSPPWLLFIADNGI 813

Query: 557  GKRVPLSAFRLSNFNRVGLLGYKLPPDCRLAAVYVVGFSLSATNEDGESDGQLVLVSQSG 378
            GKRVPL+AFR  NFNRVGL GYKLPPDC LAAV+VVGFSL+   +DGESD Q+VLVSQSG
Sbjct: 814  GKRVPLNAFRQGNFNRVGLQGYKLPPDCSLAAVFVVGFSLT---DDGESDEQVVLVSQSG 870

Query: 377  TVNRIKVRDISIQSRASRGVILMRLEYAGKIQSASLISASADNVGDD 237
            TVNRIKV+DISI+SR++RGVILMRLE+AGKIQSASLISA+ +    D
Sbjct: 871  TVNRIKVKDISIRSRSARGVILMRLEHAGKIQSASLISAAEEEEEQD 917


>gb|AAP73860.1| putative DNA gyrase subunit [Oryza sativa Japonica Group]
          Length = 931

 Score =  827 bits (2135), Expect = 0.0
 Identities = 433/587 (73%), Positives = 498/587 (84%), Gaps = 1/587 (0%)
 Frame = -3

Query: 1994 IKEIPYQTNKSALVEKIAELVEQKILDGISDIRDESDRFGMRVVIELKRGSDPSIVLNNL 1815
            IKE+PYQTNKS LVE+IAELVE+K+L+GISDIRDESDR GMRVVIELKRG+DP+IVLNNL
Sbjct: 339  IKEVPYQTNKSTLVERIAELVEEKVLEGISDIRDESDRSGMRVVIELKRGADPAIVLNNL 398

Query: 1814 YRHTALQSSFSCNMVGILDGQPKLMGLKELLQAFLDFRSSVIERRAAFKLSQALERKHII 1635
            YRHTALQSSFSCNMV ILDGQPKLMGLKE+LQAF+DFR SVIERRA FKLSQALERKHI+
Sbjct: 399  YRHTALQSSFSCNMVAILDGQPKLMGLKEILQAFIDFRCSVIERRARFKLSQALERKHIV 458

Query: 1634 EGIIIGLDNLDAIINIIRKTSSNTLAITSLVKEYHLSEKQAEAXXXXXXXXXXXXXXXKF 1455
            EGI+IGLDNLD++I IIR TS++ +A  SL+KE+ LS+KQAEA               KF
Sbjct: 459  EGIVIGLDNLDSVIQIIRGTSNHAMARESLIKEFGLSDKQAEALLDITLRKLTSLERKKF 518

Query: 1454 VDEAESLSDQIXXXXXXXXXXXLIFQLIEKEAIELKHKFGSPRRSFIEYSGSSQLEEIDV 1275
            VDEA+SLS++I           LIFQLI +EA +LK+KF +PRRSFIE S S++++++D+
Sbjct: 519  VDEAKSLSEEISKLNELLSNKKLIFQLILQEATDLKNKFATPRRSFIEDSASTEVDDLDI 578

Query: 1274 IPNVEMLLTLSEKGYLKRMKPNTFTLQHRGTIGKSVGKMRVNDLMSDFIVCHTHDHILYF 1095
            IPN EMLL LSEKGY+KRMKPNTF LQ+RGTIGKSVGKMR+ND  SDFIVC THDH+LYF
Sbjct: 579  IPNEEMLLILSEKGYVKRMKPNTFNLQNRGTIGKSVGKMRMNDNTSDFIVCQTHDHVLYF 638

Query: 1094 SDKGIVYSARAYKIPECSRTATGTPLVQLLSLSEGERITSIVPVSEFIDDQYLVMLTLNG 915
            SDKGIVYSARAYKIPEC+R ATGTPLVQLLSLS+GERITSIVPV+EF +DQYLVMLT+NG
Sbjct: 639  SDKGIVYSARAYKIPECTRAATGTPLVQLLSLSDGERITSIVPVNEFGEDQYLVMLTVNG 698

Query: 914  YIKKVSLKAFSAIRPSGIIAIQLVAGDELKWVRLCADADLVALASQKGMVIVNFCSKLRA 735
            YIKKV L AFSAIR SGII+IQL  GDELKWVR C D DLVALASQ GMVIVN C+KLRA
Sbjct: 699  YIKKVPLNAFSAIRTSGIISIQLAPGDELKWVRRCGDDDLVALASQNGMVIVNTCNKLRA 758

Query: 734  LGRKTRGVISMKLK-GDKMASMDVIPASIQKDLQKLSENIYSRGKDLGPPWLLFVSESGH 558
            LGRKTRGV++MKLK GDKMASMD+IPA+            YSR +DL PPWLLF++++G 
Sbjct: 759  LGRKTRGVLAMKLKEGDKMASMDIIPATSHN-----MPETYSRVRDLSPPWLLFIADNGI 813

Query: 557  GKRVPLSAFRLSNFNRVGLLGYKLPPDCRLAAVYVVGFSLSATNEDGESDGQLVLVSQSG 378
            GKRVPL+AFR  NFNRVGL GYKLPPDC LAAV+VVGFSL+   +DGESD Q+VLVSQSG
Sbjct: 814  GKRVPLNAFRQGNFNRVGLQGYKLPPDCSLAAVFVVGFSLT---DDGESDEQVVLVSQSG 870

Query: 377  TVNRIKVRDISIQSRASRGVILMRLEYAGKIQSASLISASADNVGDD 237
            TVNRIKV+DISI+SR++RGVILMRLE+AGKIQSASLISA+ +    D
Sbjct: 871  TVNRIKVKDISIRSRSARGVILMRLEHAGKIQSASLISAAEEEEEQD 917


>gb|AFW67221.1| hypothetical protein ZEAMMB73_149484 [Zea mays]
          Length = 932

 Score =  812 bits (2098), Expect = 0.0
 Identities = 429/587 (73%), Positives = 492/587 (83%), Gaps = 1/587 (0%)
 Frame = -3

Query: 1994 IKEIPYQTNKSALVEKIAELVEQKILDGISDIRDESDRFGMRVVIELKRGSDPSIVLNNL 1815
            IKEIPYQTNK+ LV+KIAELVE K+L+GISDIRDESDR GMRVVIELKR +DP++VLNNL
Sbjct: 353  IKEIPYQTNKATLVQKIAELVEDKVLEGISDIRDESDRTGMRVVIELKRSADPAVVLNNL 412

Query: 1814 YRHTALQSSFSCNMVGILDGQPKLMGLKELLQAFLDFRSSVIERRAAFKLSQALERKHII 1635
            YRHTALQSSFSCNMV ILDGQPKLMGLKE+LQAFLDFR SVIERRA +KLSQALERKHI+
Sbjct: 413  YRHTALQSSFSCNMVAILDGQPKLMGLKEILQAFLDFRCSVIERRARYKLSQALERKHIV 472

Query: 1634 EGIIIGLDNLDAIINIIRKTSSNTLAITSLVKEYHLSEKQAEAXXXXXXXXXXXXXXXKF 1455
            EGI+IGLDNLDA+I IIR+TS++T A  +LV E+ LSEKQAEA               KF
Sbjct: 473  EGIVIGLDNLDAVIQIIRETSNHTAATRALVNEFDLSEKQAEALLDITLKKLTSLERKKF 532

Query: 1454 VDEAESLSDQIXXXXXXXXXXXLIFQLIEKEAIELKHKFGSPRRSFIEYSGSSQLEEIDV 1275
            VDEA+++S++I           LIFQLI++EA +LK KF +PRRS I+ S SS++++ID+
Sbjct: 533  VDEAKTMSEEISKLNELLSSKKLIFQLIQQEAADLKSKFSTPRRSVIDDSISSEVDDIDI 592

Query: 1274 IPNVEMLLTLSEKGYLKRMKPNTFTLQHRGTIGKSVGKMRVNDLMSDFIVCHTHDHILYF 1095
            IPN EMLL LSEKGY KRM P+TF+LQHRGTIGKSVGKMR+ND  SDFIVC THDH+LYF
Sbjct: 593  IPNEEMLLILSEKGYAKRMNPDTFSLQHRGTIGKSVGKMRMNDSTSDFIVCQTHDHVLYF 652

Query: 1094 SDKGIVYSARAYKIPECSRTATGTPLVQLLSLSEGERITSIVPVSEFIDDQYLVMLTLNG 915
            SDKGIVYSARAYKIPEC+RTATGTPLVQLL LS+GERITSI+PVSEF ++QYLVMLT+NG
Sbjct: 653  SDKGIVYSARAYKIPECTRTATGTPLVQLLPLSDGERITSIIPVSEFGENQYLVMLTVNG 712

Query: 914  YIKKVSLKAFSAIRPSGIIAIQLVAGDELKWVRLCADADLVALASQKGMVIVNFCSKLRA 735
            YIKKV L AFS+IR +GII+IQLV GDELKWVR C + DLVALASQKG VIVN C KLRA
Sbjct: 713  YIKKVPLNAFSSIRSTGIISIQLVPGDELKWVRHCGNDDLVALASQKGRVIVNSCDKLRA 772

Query: 734  LGRKTRGVISMKLK-GDKMASMDVIPASIQKDLQKLSENIYSRGKDLGPPWLLFVSESGH 558
            LGR TRGV +MKLK GD MA+MD+IPA++     K+ E   SR +D  PPWLLF++ESG 
Sbjct: 773  LGRNTRGVCAMKLKEGDMMAAMDIIPATV----HKMPERCNSRLRDSSPPWLLFIAESGI 828

Query: 557  GKRVPLSAFRLSNFNRVGLLGYKLPPDCRLAAVYVVGFSLSATNEDGESDGQLVLVSQSG 378
            GKRVPL+AFR SNFN VGL GYKLP DCRLAAV+V G SL+   EDGESD Q+VLVSQSG
Sbjct: 829  GKRVPLNAFRQSNFNAVGLQGYKLPADCRLAAVFVAGLSLT---EDGESDEQVVLVSQSG 885

Query: 377  TVNRIKVRDISIQSRASRGVILMRLEYAGKIQSASLISASADNVGDD 237
            TVNRIKV+DISIQSR SRGVILMRLE+AGKIQSASLISA+A  V +D
Sbjct: 886  TVNRIKVKDISIQSRRSRGVILMRLEHAGKIQSASLISAAAAEVTED 932


>ref|XP_006651950.1| PREDICTED: probable DNA gyrase subunit A,
            chloroplastic/mitochondrial-like [Oryza brachyantha]
          Length = 845

 Score =  811 bits (2096), Expect = 0.0
 Identities = 419/587 (71%), Positives = 493/587 (83%), Gaps = 1/587 (0%)
 Frame = -3

Query: 1994 IKEIPYQTNKSALVEKIAELVEQKILDGISDIRDESDRFGMRVVIELKRGSDPSIVLNNL 1815
            IKEIPYQTNK+ LVE+IAEL E+K+L+GISDIRDESDR GMRVVIELKRG+DP+IVLNNL
Sbjct: 259  IKEIPYQTNKATLVERIAELAEEKVLEGISDIRDESDRSGMRVVIELKRGADPAIVLNNL 318

Query: 1814 YRHTALQSSFSCNMVGILDGQPKLMGLKELLQAFLDFRSSVIERRAAFKLSQALERKHII 1635
            YRHTALQSSFSCNMV ILDGQPKLMGLKE++QAF+DFR SVIERRA FKLS ALERKHI+
Sbjct: 319  YRHTALQSSFSCNMVAILDGQPKLMGLKEIIQAFIDFRCSVIERRARFKLSHALERKHIV 378

Query: 1634 EGIIIGLDNLDAIINIIRKTSSNTLAITSLVKEYHLSEKQAEAXXXXXXXXXXXXXXXKF 1455
            EGI++GLDNLD++I IIR TS++ +A  SL+KE+ LS+KQAEA               KF
Sbjct: 379  EGIVVGLDNLDSVIQIIRGTSNHAMATESLIKEFGLSDKQAEALLDITLRKLTSLERKKF 438

Query: 1454 VDEAESLSDQIXXXXXXXXXXXLIFQLIEKEAIELKHKFGSPRRSFIEYSGSSQLEEIDV 1275
            +DEA SLS++I           LIFQLI +EA +LK+KF +PRRSFIE S S +++++D+
Sbjct: 439  IDEANSLSEEISKLNELLSSKKLIFQLIVQEATDLKNKFTTPRRSFIEDSASIEVDDLDI 498

Query: 1274 IPNVEMLLTLSEKGYLKRMKPNTFTLQHRGTIGKSVGKMRVNDLMSDFIVCHTHDHILYF 1095
            IPN EMLL LSEKGY+KRMKPNTF LQHRGTIGKSVGKMR+ND  SDFI C THDH+LYF
Sbjct: 499  IPNEEMLLILSEKGYVKRMKPNTFNLQHRGTIGKSVGKMRMNDSTSDFIACQTHDHVLYF 558

Query: 1094 SDKGIVYSARAYKIPECSRTATGTPLVQLLSLSEGERITSIVPVSEFIDDQYLVMLTLNG 915
            SDKGIVYSARAYKIPEC+R A GTPLVQLLSLS+GERITSI+PVSEF +DQYL+MLT+NG
Sbjct: 559  SDKGIVYSARAYKIPECTRIAAGTPLVQLLSLSDGERITSIIPVSEFGEDQYLMMLTVNG 618

Query: 914  YIKKVSLKAFSAIRPSGIIAIQLVAGDELKWVRLCADADLVALASQKGMVIVNFCSKLRA 735
            YIKKV L AFSAIR SGII+IQLV GDELKWVR C + DLVALASQ GMVIVN C+KLR+
Sbjct: 619  YIKKVPLNAFSAIRTSGIISIQLVPGDELKWVRRCGNDDLVALASQNGMVIVNSCNKLRS 678

Query: 734  LGRKTRGVISMKLK-GDKMASMDVIPASIQKDLQKLSENIYSRGKDLGPPWLLFVSESGH 558
            LGRKTRGV++MKL+ GDKMASMD+IPA+       + E   SR +DL PPWLLF++++G 
Sbjct: 679  LGRKTRGVMAMKLREGDKMASMDIIPAT----SHNMPETYNSRVRDLSPPWLLFIADNGM 734

Query: 557  GKRVPLSAFRLSNFNRVGLLGYKLPPDCRLAAVYVVGFSLSATNEDGESDGQLVLVSQSG 378
            GKRVPL+AFR SNFNR+G+ GYKLPP+C LAAV+VVGFSL+   +DG+SD Q+VLVSQSG
Sbjct: 735  GKRVPLNAFRRSNFNRIGMQGYKLPPECSLAAVFVVGFSLT---DDGQSDEQVVLVSQSG 791

Query: 377  TVNRIKVRDISIQSRASRGVILMRLEYAGKIQSASLISASADNVGDD 237
            T NRIKV+D+SIQSR++RGVILMRLE+ GKIQSASLISA+ +    D
Sbjct: 792  TANRIKVKDVSIQSRSARGVILMRLEHGGKIQSASLISAAEEEEEQD 838


>ref|XP_004981303.1| PREDICTED: probable DNA gyrase subunit A,
            chloroplastic/mitochondrial-like [Setaria italica]
          Length = 821

 Score =  808 bits (2087), Expect = 0.0
 Identities = 425/587 (72%), Positives = 489/587 (83%), Gaps = 1/587 (0%)
 Frame = -3

Query: 1994 IKEIPYQTNKSALVEKIAELVEQKILDGISDIRDESDRFGMRVVIELKRGSDPSIVLNNL 1815
            IKEIPYQ NK+ LVEKIAELVE K+L+GISDIRDESDR GMRVVIELKR +DP+IVLNNL
Sbjct: 242  IKEIPYQANKATLVEKIAELVEDKVLEGISDIRDESDRTGMRVVIELKRSADPAIVLNNL 301

Query: 1814 YRHTALQSSFSCNMVGILDGQPKLMGLKELLQAFLDFRSSVIERRAAFKLSQALERKHII 1635
            YRHTALQSSFSCNMV ILDGQPKLMGL+E+LQAFLDFR SVIERRA FKLSQALERKHI+
Sbjct: 302  YRHTALQSSFSCNMVAILDGQPKLMGLREILQAFLDFRCSVIERRARFKLSQALERKHIV 361

Query: 1634 EGIIIGLDNLDAIINIIRKTSSNTLAITSLVKEYHLSEKQAEAXXXXXXXXXXXXXXXKF 1455
            EGI++GLDNLDA+I IIR+TS++  A  +LVKE+ LSEKQAEA               KF
Sbjct: 362  EGIVVGLDNLDAVIQIIRETSNHAAATEALVKEFDLSEKQAEALLDITLRKLTSLERKKF 421

Query: 1454 VDEAESLSDQIXXXXXXXXXXXLIFQLIEKEAIELKHKFGSPRRSFIEYSGSSQLEEIDV 1275
            VDEA++LS++I           LIFQLI++EA +LK+KF + RRS I+ S +S++++ID+
Sbjct: 422  VDEAKTLSEEISKLNELLSSKKLIFQLIQQEAADLKNKFSTLRRSLIDDSVNSEVDDIDI 481

Query: 1274 IPNVEMLLTLSEKGYLKRMKPNTFTLQHRGTIGKSVGKMRVNDLMSDFIVCHTHDHILYF 1095
            IPN EMLL LSEKGY+KRM PNTF LQ+RGTIGKSVGKMR+ND  SDFIVC  HDH+LYF
Sbjct: 482  IPNEEMLLILSEKGYVKRMNPNTFNLQNRGTIGKSVGKMRMNDTTSDFIVCQMHDHVLYF 541

Query: 1094 SDKGIVYSARAYKIPECSRTATGTPLVQLLSLSEGERITSIVPVSEFIDDQYLVMLTLNG 915
            SDKGIVYSARAYKIPEC+RTATGTPLVQLLSLS+GERITSI+PVSEF +DQYLVMLT+NG
Sbjct: 542  SDKGIVYSARAYKIPECTRTATGTPLVQLLSLSDGERITSIIPVSEFGEDQYLVMLTVNG 601

Query: 914  YIKKVSLKAFSAIRPSGIIAIQLVAGDELKWVRLCADADLVALASQKGMVIVNFCSKLRA 735
            YIKKV L AFS+IR SGII+IQLV GDELKWVR C + DLVALASQKG VIVN C K+R 
Sbjct: 602  YIKKVPLNAFSSIRSSGIISIQLVPGDELKWVRRCGNDDLVALASQKGKVIVNSCDKIRP 661

Query: 734  LGRKTRGVISMKLK-GDKMASMDVIPASIQKDLQKLSENIYSRGKDLGPPWLLFVSESGH 558
            LGR TRG  +MKLK GDKMA+MD+IPA++     K+ E   SR +DL PPWLLF++E+G 
Sbjct: 662  LGRNTRGACAMKLKDGDKMAAMDIIPATV----HKMPETYNSRSRDLSPPWLLFIAENGL 717

Query: 557  GKRVPLSAFRLSNFNRVGLLGYKLPPDCRLAAVYVVGFSLSATNEDGESDGQLVLVSQSG 378
            GKRVPL+AFR S FN VGL GYKLP DCRLAAV+V G SL    +DGESD Q+VLVSQSG
Sbjct: 718  GKRVPLNAFRQSRFNLVGLAGYKLPEDCRLAAVFVAGLSL---GDDGESDEQVVLVSQSG 774

Query: 377  TVNRIKVRDISIQSRASRGVILMRLEYAGKIQSASLISASADNVGDD 237
            TVNRIKV+DISIQSR +RGVILMRLE+AGKIQSASLISA+A  V +D
Sbjct: 775  TVNRIKVKDISIQSRYARGVILMRLEHAGKIQSASLISAAAAEVAED 821


>gb|AFW67220.1| hypothetical protein ZEAMMB73_149484 [Zea mays]
          Length = 933

 Score =  808 bits (2086), Expect = 0.0
 Identities = 429/588 (72%), Positives = 492/588 (83%), Gaps = 2/588 (0%)
 Frame = -3

Query: 1994 IKEIPYQTNKSALVEKIAELVEQKILDGISDIRDESDRFGMRVVIELKRGSDPSIVLNNL 1815
            IKEIPYQTNK+ LV+KIAELVE K+L+GISDIRDESDR GMRVVIELKR +DP++VLNNL
Sbjct: 353  IKEIPYQTNKATLVQKIAELVEDKVLEGISDIRDESDRTGMRVVIELKRSADPAVVLNNL 412

Query: 1814 YRHTALQSSFSCNMVGILDGQPKLMGLKELLQAFLDFRSSVIERRAAFKLSQALERKHII 1635
            YRHTALQSSFSCNMV ILDGQPKLMGLKE+LQAFLDFR SVIERRA +KLSQALERKHI+
Sbjct: 413  YRHTALQSSFSCNMVAILDGQPKLMGLKEILQAFLDFRCSVIERRARYKLSQALERKHIV 472

Query: 1634 EGIIIGLDNLDAIINIIRKTSSNTLAITSLVKEYHLSEKQAEAXXXXXXXXXXXXXXXKF 1455
            EGI+IGLDNLDA+I IIR+TS++T A  +LV E+ LSEKQAEA               KF
Sbjct: 473  EGIVIGLDNLDAVIQIIRETSNHTAATRALVNEFDLSEKQAEALLDITLKKLTSLERKKF 532

Query: 1454 VDEAESLSDQIXXXXXXXXXXXLIFQLIEKEAIELKHKFGSPRRSFIEYSGSSQLEEIDV 1275
            VDEA+++S++I           LIFQLI++EA +LK KF +PRRS I+ S SS++++ID+
Sbjct: 533  VDEAKTMSEEISKLNELLSSKKLIFQLIQQEAADLKSKFSTPRRSVIDDSISSEVDDIDI 592

Query: 1274 IPNVEMLLT-LSEKGYLKRMKPNTFTLQHRGTIGKSVGKMRVNDLMSDFIVCHTHDHILY 1098
            IPN EMLL  LSEKGY KRM P+TF+LQHRGTIGKSVGKMR+ND  SDFIVC THDH+LY
Sbjct: 593  IPNEEMLLKILSEKGYAKRMNPDTFSLQHRGTIGKSVGKMRMNDSTSDFIVCQTHDHVLY 652

Query: 1097 FSDKGIVYSARAYKIPECSRTATGTPLVQLLSLSEGERITSIVPVSEFIDDQYLVMLTLN 918
            FSDKGIVYSARAYKIPEC+RTATGTPLVQLL LS+GERITSI+PVSEF ++QYLVMLT+N
Sbjct: 653  FSDKGIVYSARAYKIPECTRTATGTPLVQLLPLSDGERITSIIPVSEFGENQYLVMLTVN 712

Query: 917  GYIKKVSLKAFSAIRPSGIIAIQLVAGDELKWVRLCADADLVALASQKGMVIVNFCSKLR 738
            GYIKKV L AFS+IR +GII+IQLV GDELKWVR C + DLVALASQKG VIVN C KLR
Sbjct: 713  GYIKKVPLNAFSSIRSTGIISIQLVPGDELKWVRHCGNDDLVALASQKGRVIVNSCDKLR 772

Query: 737  ALGRKTRGVISMKLK-GDKMASMDVIPASIQKDLQKLSENIYSRGKDLGPPWLLFVSESG 561
            ALGR TRGV +MKLK GD MA+MD+IPA++     K+ E   SR +D  PPWLLF++ESG
Sbjct: 773  ALGRNTRGVCAMKLKEGDMMAAMDIIPATV----HKMPERCNSRLRDSSPPWLLFIAESG 828

Query: 560  HGKRVPLSAFRLSNFNRVGLLGYKLPPDCRLAAVYVVGFSLSATNEDGESDGQLVLVSQS 381
             GKRVPL+AFR SNFN VGL GYKLP DCRLAAV+V G SL+   EDGESD Q+VLVSQS
Sbjct: 829  IGKRVPLNAFRQSNFNAVGLQGYKLPADCRLAAVFVAGLSLT---EDGESDEQVVLVSQS 885

Query: 380  GTVNRIKVRDISIQSRASRGVILMRLEYAGKIQSASLISASADNVGDD 237
            GTVNRIKV+DISIQSR SRGVILMRLE+AGKIQSASLISA+A  V +D
Sbjct: 886  GTVNRIKVKDISIQSRRSRGVILMRLEHAGKIQSASLISAAAAEVTED 933


>ref|XP_003559252.1| PREDICTED: probable DNA gyrase subunit A,
            chloroplastic/mitochondrial-like [Brachypodium
            distachyon]
          Length = 1130

 Score =  803 bits (2073), Expect = 0.0
 Identities = 420/586 (71%), Positives = 489/586 (83%), Gaps = 1/586 (0%)
 Frame = -3

Query: 1994 IKEIPYQTNKSALVEKIAELVEQKILDGISDIRDESDRFGMRVVIELKRGSDPSIVLNNL 1815
            IKEIPYQTNK+ LV++IAEL E K+L+GISDIRDESDR GMRVVIE+KRG++P IVLNNL
Sbjct: 334  IKEIPYQTNKATLVQRIAELAEDKVLEGISDIRDESDRSGMRVVIEVKRGANPEIVLNNL 393

Query: 1814 YRHTALQSSFSCNMVGILDGQPKLMGLKELLQAFLDFRSSVIERRAAFKLSQALERKHII 1635
            YRHTALQSSFSCNMV ILDG PKLMGLKE+LQAFLDFR SVIERRA FKLSQALERKHI+
Sbjct: 394  YRHTALQSSFSCNMVAILDGHPKLMGLKEILQAFLDFRCSVIERRAKFKLSQALERKHIV 453

Query: 1634 EGIIIGLDNLDAIINIIRKTSSNTLAITSLVKEYHLSEKQAEAXXXXXXXXXXXXXXXKF 1455
            EGI+IGLDNLD++I +IR+TS+++ A  +L  EY LSEKQAEA               KF
Sbjct: 454  EGIVIGLDNLDSVIQMIRETSNHSKAKEALANEYGLSEKQAEALLDITLRKLTSLERKKF 513

Query: 1454 VDEAESLSDQIXXXXXXXXXXXLIFQLIEKEAIELKHKFGSPRRSFIEYSGSSQLEEIDV 1275
            +DE+ SLS+ I           L+FQLIE+EA +LK+KF +PRRSF+E S + +++++DV
Sbjct: 514  IDESNSLSEDISKLNELLSSKKLMFQLIEQEAADLKNKFATPRRSFLEDSANGEVDDMDV 573

Query: 1274 IPNVEMLLTLSEKGYLKRMKPNTFTLQHRGTIGKSVGKMRVNDLMSDFIVCHTHDHILYF 1095
            IPN EMLL +SEKGYLKRMKPNTF LQHRGTIGKSVGKMR ND  SDFIVC THDH+LYF
Sbjct: 574  IPNEEMLLIVSEKGYLKRMKPNTFNLQHRGTIGKSVGKMRTNDSTSDFIVCQTHDHVLYF 633

Query: 1094 SDKGIVYSARAYKIPECSRTATGTPLVQLLSLSEGERITSIVPVSEFIDDQYLVMLTLNG 915
            SDKGIVYSARAYKIPEC+R A GTPLVQLLSLS+GERITSI+PVSEF +DQYLVMLT+NG
Sbjct: 634  SDKGIVYSARAYKIPECTRNAAGTPLVQLLSLSDGERITSIIPVSEFGEDQYLVMLTVNG 693

Query: 914  YIKKVSLKAFSAIRPSGIIAIQLVAGDELKWVRLCADADLVALASQKGMVIVNFCSKLRA 735
            YIKKV L  FS+IRP+GII+IQLV GDELKWVRLC D DLVALASQ GMVIVN C+KLRA
Sbjct: 694  YIKKVPLNVFSSIRPTGIISIQLVPGDELKWVRLCGDDDLVALASQTGMVIVNTCNKLRA 753

Query: 734  LGRKTRGVISMKLK-GDKMASMDVIPASIQKDLQKLSENIYSRGKDLGPPWLLFVSESGH 558
            LGRKTRGV++MKLK  DKMASMD+IPA+    + K+ E   SR KDL PPWLLF++E+G 
Sbjct: 754  LGRKTRGVVAMKLKEDDKMASMDIIPAT----MHKMPEKYDSRVKDLSPPWLLFIAENGL 809

Query: 557  GKRVPLSAFRLSNFNRVGLLGYKLPPDCRLAAVYVVGFSLSATNEDGESDGQLVLVSQSG 378
            GKRVPL+AFR S+FNR GL GYKLP DCRLAAV+VVG SL+   +DG SD Q+VL+S  G
Sbjct: 810  GKRVPLNAFRQSSFNRRGLHGYKLPEDCRLAAVFVVGVSLA---DDGGSDEQVVLISHGG 866

Query: 377  TVNRIKVRDISIQSRASRGVILMRLEYAGKIQSASLISASADNVGD 240
            TVNRIKV+DISIQ R ++GVILMRLE+AGKIQSASL+SA A+ +G+
Sbjct: 867  TVNRIKVKDISIQGRGAKGVILMRLEHAGKIQSASLMSA-AEQLGE 911


>ref|XP_002271674.2| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Vitis vinifera]
          Length = 925

 Score =  799 bits (2064), Expect = 0.0
 Identities = 418/588 (71%), Positives = 487/588 (82%), Gaps = 1/588 (0%)
 Frame = -3

Query: 1994 IKEIPYQTNKSALVEKIAELVEQKILDGISDIRDESDRFGMRVVIELKRGSDPSIVLNNL 1815
            IKEIPYQTNKS+LVEKIAELVE K LDGISDIRDESDR GMR+VIELKRGSDPSIVLN L
Sbjct: 335  IKEIPYQTNKSSLVEKIAELVENKSLDGISDIRDESDRSGMRIVIELKRGSDPSIVLNKL 394

Query: 1814 YRHTALQSSFSCNMVGILDGQPKLMGLKELLQAFLDFRSSVIERRAAFKLSQALERKHII 1635
            YR TALQSSFSCNM+GILDGQPKLMGLKELLQAFLDFR SV+ERRA FKLSQA ER+HI+
Sbjct: 395  YRLTALQSSFSCNMIGILDGQPKLMGLKELLQAFLDFRCSVVERRARFKLSQAQERRHIV 454

Query: 1634 EGIIIGLDNLDAIINIIRKTSSNTLAITSLVKEYHLSEKQAEAXXXXXXXXXXXXXXXKF 1455
            EGI++GLDNLDA+I +I++  SN +A T L  E+ LSE+QAEA               KF
Sbjct: 455  EGIVVGLDNLDAVIRVIKEAPSNAMASTGLRNEFGLSERQAEAILDISLRRITRLEREKF 514

Query: 1454 VDEAESLSDQIXXXXXXXXXXXLIFQLIEKEAIELKHKFGSPRRSFIEYSGSSQLEEIDV 1275
            V E++SL +QI            I QLIE+EAIELK++F +PRRS +E + S QLE++DV
Sbjct: 515  VTESKSLMEQISKLQELLSSRKQILQLIEQEAIELKNRFSTPRRSMLEDTDSGQLEDVDV 574

Query: 1274 IPNVEMLLTLSEKGYLKRMKPNTFTLQHRGTIGKSVGKMRVNDLMSDFIVCHTHDHILYF 1095
            IPN EMLL +SEKGY+KRMKPNTF LQ+RGTIGKSVGK+RVND MSDFIVCH HD++LYF
Sbjct: 575  IPNEEMLLAVSEKGYVKRMKPNTFNLQNRGTIGKSVGKLRVNDAMSDFIVCHAHDYVLYF 634

Query: 1094 SDKGIVYSARAYKIPECSRTATGTPLVQLLSLSEGERITSIVPVSEFIDDQYLVMLTLNG 915
            SD+GIV+SARAYKIPEC+RTA GTPLVQ+L LS+GERITSI+PVSEF +DQ+L+MLT+NG
Sbjct: 635  SDRGIVHSARAYKIPECTRTAAGTPLVQILCLSDGERITSIIPVSEFAEDQFLLMLTMNG 694

Query: 914  YIKKVSLKAFSAIRPSGIIAIQLVAGDELKWVRLCADADLVALASQKGMVIVNFCSKLRA 735
            YIKKVSL  FS+IR +GIIAIQLV GDELKWVR C + DLVA+ASQ GMVI++ C  +RA
Sbjct: 695  YIKKVSLNFFSSIRSTGIIAIQLVPGDELKWVRCCTNDDLVAMASQNGMVILSSCEIIRA 754

Query: 734  LGRKTRGVISMKLK-GDKMASMDVIPASIQKDLQKLSENIYSRGKDLGPPWLLFVSESGH 558
            LGR TRG I+M+LK GDKMASMD+IPA+I+KDL+K  E+  SR ++L  PWLLFVSESG 
Sbjct: 755  LGRNTRGSIAMRLKQGDKMASMDIIPAAIRKDLEKALEDRQSRARNLNGPWLLFVSESGL 814

Query: 557  GKRVPLSAFRLSNFNRVGLLGYKLPPDCRLAAVYVVGFSLSATNEDGESDGQLVLVSQSG 378
            GKRVPLS FRLS  NRVGL+GYK   +  LAAV+VVGFSL+   EDGESD Q+VLVSQSG
Sbjct: 815  GKRVPLSRFRLSPLNRVGLIGYKFSAEDHLAAVFVVGFSLT---EDGESDEQVVLVSQSG 871

Query: 377  TVNRIKVRDISIQSRASRGVILMRLEYAGKIQSASLISASADNVGDDD 234
            T+NRIKV DISIQSR +RGVILMRLEYAGKIQSASL+SA+     D++
Sbjct: 872  TINRIKVWDISIQSRFARGVILMRLEYAGKIQSASLMSATETETDDEE 919


>emb|CBI29133.3| unnamed protein product [Vitis vinifera]
          Length = 823

 Score =  799 bits (2064), Expect = 0.0
 Identities = 418/588 (71%), Positives = 487/588 (82%), Gaps = 1/588 (0%)
 Frame = -3

Query: 1994 IKEIPYQTNKSALVEKIAELVEQKILDGISDIRDESDRFGMRVVIELKRGSDPSIVLNNL 1815
            IKEIPYQTNKS+LVEKIAELVE K LDGISDIRDESDR GMR+VIELKRGSDPSIVLN L
Sbjct: 233  IKEIPYQTNKSSLVEKIAELVENKSLDGISDIRDESDRSGMRIVIELKRGSDPSIVLNKL 292

Query: 1814 YRHTALQSSFSCNMVGILDGQPKLMGLKELLQAFLDFRSSVIERRAAFKLSQALERKHII 1635
            YR TALQSSFSCNM+GILDGQPKLMGLKELLQAFLDFR SV+ERRA FKLSQA ER+HI+
Sbjct: 293  YRLTALQSSFSCNMIGILDGQPKLMGLKELLQAFLDFRCSVVERRARFKLSQAQERRHIV 352

Query: 1634 EGIIIGLDNLDAIINIIRKTSSNTLAITSLVKEYHLSEKQAEAXXXXXXXXXXXXXXXKF 1455
            EGI++GLDNLDA+I +I++  SN +A T L  E+ LSE+QAEA               KF
Sbjct: 353  EGIVVGLDNLDAVIRVIKEAPSNAMASTGLRNEFGLSERQAEAILDISLRRITRLEREKF 412

Query: 1454 VDEAESLSDQIXXXXXXXXXXXLIFQLIEKEAIELKHKFGSPRRSFIEYSGSSQLEEIDV 1275
            V E++SL +QI            I QLIE+EAIELK++F +PRRS +E + S QLE++DV
Sbjct: 413  VTESKSLMEQISKLQELLSSRKQILQLIEQEAIELKNRFSTPRRSMLEDTDSGQLEDVDV 472

Query: 1274 IPNVEMLLTLSEKGYLKRMKPNTFTLQHRGTIGKSVGKMRVNDLMSDFIVCHTHDHILYF 1095
            IPN EMLL +SEKGY+KRMKPNTF LQ+RGTIGKSVGK+RVND MSDFIVCH HD++LYF
Sbjct: 473  IPNEEMLLAVSEKGYVKRMKPNTFNLQNRGTIGKSVGKLRVNDAMSDFIVCHAHDYVLYF 532

Query: 1094 SDKGIVYSARAYKIPECSRTATGTPLVQLLSLSEGERITSIVPVSEFIDDQYLVMLTLNG 915
            SD+GIV+SARAYKIPEC+RTA GTPLVQ+L LS+GERITSI+PVSEF +DQ+L+MLT+NG
Sbjct: 533  SDRGIVHSARAYKIPECTRTAAGTPLVQILCLSDGERITSIIPVSEFAEDQFLLMLTMNG 592

Query: 914  YIKKVSLKAFSAIRPSGIIAIQLVAGDELKWVRLCADADLVALASQKGMVIVNFCSKLRA 735
            YIKKVSL  FS+IR +GIIAIQLV GDELKWVR C + DLVA+ASQ GMVI++ C  +RA
Sbjct: 593  YIKKVSLNFFSSIRSTGIIAIQLVPGDELKWVRCCTNDDLVAMASQNGMVILSSCEIIRA 652

Query: 734  LGRKTRGVISMKLK-GDKMASMDVIPASIQKDLQKLSENIYSRGKDLGPPWLLFVSESGH 558
            LGR TRG I+M+LK GDKMASMD+IPA+I+KDL+K  E+  SR ++L  PWLLFVSESG 
Sbjct: 653  LGRNTRGSIAMRLKQGDKMASMDIIPAAIRKDLEKALEDRQSRARNLNGPWLLFVSESGL 712

Query: 557  GKRVPLSAFRLSNFNRVGLLGYKLPPDCRLAAVYVVGFSLSATNEDGESDGQLVLVSQSG 378
            GKRVPLS FRLS  NRVGL+GYK   +  LAAV+VVGFSL+   EDGESD Q+VLVSQSG
Sbjct: 713  GKRVPLSRFRLSPLNRVGLIGYKFSAEDHLAAVFVVGFSLT---EDGESDEQVVLVSQSG 769

Query: 377  TVNRIKVRDISIQSRASRGVILMRLEYAGKIQSASLISASADNVGDDD 234
            T+NRIKV DISIQSR +RGVILMRLEYAGKIQSASL+SA+     D++
Sbjct: 770  TINRIKVWDISIQSRFARGVILMRLEYAGKIQSASLMSATETETDDEE 817


>ref|XP_006829870.1| hypothetical protein AMTR_s00119p00135690 [Amborella trichopoda]
            gi|548835451|gb|ERM97286.1| hypothetical protein
            AMTR_s00119p00135690 [Amborella trichopoda]
          Length = 963

 Score =  786 bits (2030), Expect = 0.0
 Identities = 407/589 (69%), Positives = 492/589 (83%), Gaps = 2/589 (0%)
 Frame = -3

Query: 1994 IKEIPYQTNKSALVEKIAELVEQKILDGISDIRDESDRFGMRVVIELKRGSDPSIVLNNL 1815
            I+EIPYQTNK++LVEKIAELVE K ++G+SDIRDESDR GMR+VIELK+GSDPSIVLN L
Sbjct: 380  IREIPYQTNKASLVEKIAELVEDKSIEGVSDIRDESDRSGMRIVIELKKGSDPSIVLNKL 439

Query: 1814 YRHTALQSSFSCNMVGILDGQPKLMGLKELLQAFLDFRSSVIERRAAFKLSQALERKHII 1635
            Y+ T LQSSFSCNMVGILDGQPKLMGLKE+LQAFLDFR SVIERRA FKL QA ER+HII
Sbjct: 440  YKLTVLQSSFSCNMVGILDGQPKLMGLKEMLQAFLDFRCSVIERRARFKLKQAQEREHII 499

Query: 1634 EGIIIGLDNLDAIINIIRKTSSNTLAITSLVKEYHLSEKQAEAXXXXXXXXXXXXXXXKF 1455
            EGI++GLDNLD +I++IR+ SS ++A  +L K Y+LS+KQAEA               KF
Sbjct: 500  EGILVGLDNLDDVIHLIRENSSLSMASAALKKAYNLSDKQAEALLDITLRKLTSLERKKF 559

Query: 1454 VDEAESLSDQIXXXXXXXXXXXLIFQLIEKEAIELKHKFGSPRRSFIEYSGSSQLEEIDV 1275
            V+E ESL +QI           L++Q+IE+EAIE+K+KF +PRRS +E    SQLEEIDV
Sbjct: 560  VEEGESLKEQISKLNELLSSKKLVYQMIEQEAIEVKNKFRTPRRSSLEEGDGSQLEEIDV 619

Query: 1274 IPNVEMLLTLSEKGYLKRMKPNTFTLQHRGTIGKSVGKMRVNDLMSDFIVCHTHDHILYF 1095
            IPN EMLL  SEKGY+KRM+PNTF+LQ+RGTIGKSVGKMRVND +SDFIVCH HDH+LYF
Sbjct: 620  IPNEEMLLVFSEKGYVKRMRPNTFSLQNRGTIGKSVGKMRVNDALSDFIVCHAHDHVLYF 679

Query: 1094 SDKGIVYSARAYKIPECSRTATGTPLVQLLSLSEGERITSIVPVSEFIDDQYLVMLTLNG 915
            SDKGIVYSARA++IPEC+RTA GTPLVQ+LSLS+GERITS++PVSEF+ DQYL+MLT  G
Sbjct: 680  SDKGIVYSARAFRIPECTRTAAGTPLVQILSLSDGERITSVIPVSEFVKDQYLIMLTAKG 739

Query: 914  YIKKVSLKAFSAIRPSGIIAIQLVAGDELKWVRLCADADLVALASQKGMVIVNFCSKLRA 735
            +IKK+SL+ FSAIR +GIIAIQLV GDELKWVRLC++ DL+A+ASQ GMV+++ C  LRA
Sbjct: 740  FIKKISLEFFSAIRITGIIAIQLVPGDELKWVRLCSNDDLIAMASQSGMVLLSSCETLRA 799

Query: 734  LGRKTRGVISMKLK-GDKMASMDVIPASIQKDLQKLSENIYSRGKDLGPPWLLFVSESGH 558
            +GR  RGV+SM+LK GD+MASMD+IPA++QK+LQK        GKDL  PWLLFV+ESG+
Sbjct: 800  IGRTARGVVSMRLKDGDRMASMDIIPAAMQKNLQK-------EGKDLSAPWLLFVTESGY 852

Query: 557  GKRVPLSAFRLSNFNRVGLLGYKLPPDCRLAAVYVVGFSLSATNEDGESDGQLVLVSQSG 378
            GKRVP+S+FR++ F R G++GYKLPP+  LAAV+ VGFSLSA   DGESD Q+VLVSQSG
Sbjct: 853  GKRVPVSSFRMTRFRRKGVIGYKLPPNDGLAAVFAVGFSLSA---DGESDEQVVLVSQSG 909

Query: 377  TVNRIKVRDISIQSRASRGVILMRLEYAGKIQSASLISAS-ADNVGDDD 234
            TVNRIKVRDISIQSR++ GVILMRLE+AGKI SASL+SA+ AD+  + +
Sbjct: 910  TVNRIKVRDISIQSRSAMGVILMRLEFAGKIMSASLMSATEADDSSESE 958


>gb|EOY19461.1| DNA gyrase subunit A [Theobroma cacao]
          Length = 1368

 Score =  786 bits (2030), Expect = 0.0
 Identities = 419/581 (72%), Positives = 473/581 (81%), Gaps = 1/581 (0%)
 Frame = -3

Query: 1994 IKEIPYQTNKSALVEKIAELVEQKILDGISDIRDESDRFGMRVVIELKRGSDPSIVLNNL 1815
            IKEIPYQTNKS+LVEKIAELVE K L+GISDIRDESDR GMRVVIELKRGSDPSIVLNNL
Sbjct: 338  IKEIPYQTNKSSLVEKIAELVENKSLEGISDIRDESDRSGMRVVIELKRGSDPSIVLNNL 397

Query: 1814 YRHTALQSSFSCNMVGILDGQPKLMGLKELLQAFLDFRSSVIERRAAFKLSQALERKHII 1635
            YR TALQSSFSCNMVGILDGQPK MGLKELLQ+FLDFR SV+ERRA +KLSQA +R+HI+
Sbjct: 398  YRLTALQSSFSCNMVGILDGQPKQMGLKELLQSFLDFRCSVVERRARYKLSQAQDRRHIV 457

Query: 1634 EGIIIGLDNLDAIINIIRKTSSNTLAITSLVKEYHLSEKQAEAXXXXXXXXXXXXXXXKF 1455
            EGI++GLDNLD++I+IIR+ SSN  A   L  E++LS+KQAEA               KF
Sbjct: 458  EGIVVGLDNLDSVIDIIREASSNAAASAGLRNEFNLSDKQAEAILDINLRRLNLLERKKF 517

Query: 1454 VDEAESLSDQIXXXXXXXXXXXLIFQLIEKEAIELKHKFGSPRRSFIEYSGSSQLEEIDV 1275
            V E+ SL +QI            I QLIE+EAIELK KF SPRRS +E S   QLE+IDV
Sbjct: 518  VGESRSLMEQISKLTELLSSRKNILQLIEQEAIELKSKFSSPRRSILEDSDGGQLEDIDV 577

Query: 1274 IPNVEMLLTLSEKGYLKRMKPNTFTLQHRGTIGKSVGKMRVNDLMSDFIVCHTHDHILYF 1095
            IPN EMLL  SEKGY+KRMKPNTF LQ+RGTIGKSVGK+R ND MSDFIVC  HDH+LYF
Sbjct: 578  IPNEEMLLAFSEKGYVKRMKPNTFNLQNRGTIGKSVGKLRFNDAMSDFIVCRAHDHVLYF 637

Query: 1094 SDKGIVYSARAYKIPECSRTATGTPLVQLLSLSEGERITSIVPVSEFIDDQYLVMLTLNG 915
            SDKGIVY+ARAYKIPE SRTA GTPLVQ++SLSEGERITSI+ VSEF +DQ+L MLT+NG
Sbjct: 638  SDKGIVYTARAYKIPESSRTAAGTPLVQIISLSEGERITSIISVSEFAEDQFLAMLTVNG 697

Query: 914  YIKKVSLKAFSAIRPSGIIAIQLVAGDELKWVRLCADADLVALASQKGMVIVNFCSKLRA 735
            YIKKVSL  FSAIR +GIIAIQLV GDELKWVR C + DLVA+ASQ GMVI++ C  +RA
Sbjct: 698  YIKKVSLNYFSAIRSTGIIAIQLVPGDELKWVRCCINDDLVAMASQNGMVILSSCGIIRA 757

Query: 734  LGRKTRGVISMKLK-GDKMASMDVIPASIQKDLQKLSENIYSRGKDLGPPWLLFVSESGH 558
            L R TRG I+M+LK GDKMASMD+IPA   KDL K  E+  +  K    PWLLFVSE+G+
Sbjct: 758  LSRNTRGAIAMRLKEGDKMASMDIIPAPRHKDLDKAEEDSMNNNKGGSGPWLLFVSENGY 817

Query: 557  GKRVPLSAFRLSNFNRVGLLGYKLPPDCRLAAVYVVGFSLSATNEDGESDGQLVLVSQSG 378
            GKRVPLS+F+ S  NRVGL+GYK   + RLAAV+VVGFSL+   EDGESD Q+VLVSQSG
Sbjct: 818  GKRVPLSSFKRSPLNRVGLIGYKFSSEDRLAAVFVVGFSLA---EDGESDEQVVLVSQSG 874

Query: 377  TVNRIKVRDISIQSRASRGVILMRLEYAGKIQSASLISASA 255
            TVNRIKVRDISIQSR +RGVILMRLEYAGKIQSASLISASA
Sbjct: 875  TVNRIKVRDISIQSRYARGVILMRLEYAGKIQSASLISASA 915


>ref|XP_002315402.2| DNA gyrase subunit A family protein [Populus trichocarpa]
            gi|550330577|gb|EEF01573.2| DNA gyrase subunit A family
            protein [Populus trichocarpa]
          Length = 948

 Score =  782 bits (2019), Expect = 0.0
 Identities = 409/580 (70%), Positives = 478/580 (82%), Gaps = 1/580 (0%)
 Frame = -3

Query: 1994 IKEIPYQTNKSALVEKIAELVEQKILDGISDIRDESDRFGMRVVIELKRGSDPSIVLNNL 1815
            IKEIPYQTNK++LVEKIAELVE K LDGISDIRDESDR GMR+VIELKRG+DPSIVLNNL
Sbjct: 354  IKEIPYQTNKASLVEKIAELVEDKNLDGISDIRDESDRSGMRIVIELKRGADPSIVLNNL 413

Query: 1814 YRHTALQSSFSCNMVGILDGQPKLMGLKELLQAFLDFRSSVIERRAAFKLSQALERKHII 1635
            YR T LQSSFSCNMVGILDGQPK MGLKELLQAFLDFR SV+ERRA FKLS+A +R+HI+
Sbjct: 414  YRLTPLQSSFSCNMVGILDGQPKQMGLKELLQAFLDFRCSVVERRAMFKLSEAQKRRHIV 473

Query: 1634 EGIIIGLDNLDAIINIIRKTSSNTLAITSLVKEYHLSEKQAEAXXXXXXXXXXXXXXXKF 1455
            EG++ GLDNLD +++IIRK SSN +A   L  E+ LSEKQAEA               KF
Sbjct: 474  EGVMAGLDNLDRVVDIIRKASSNAIASADLRNEFSLSEKQAEAILDISLRRLTLLEGKKF 533

Query: 1454 VDEAESLSDQIXXXXXXXXXXXLIFQLIEKEAIELKHKFGSPRRSFIEYSGSSQLEEIDV 1275
            V+E++SL +QI            I QLIE+EA+ELK+KF +PRRS +E S S QLE+IDV
Sbjct: 534  VEESKSLMEQITKLEELLSSRGNILQLIEQEAVELKNKFSNPRRSMLEDSDSGQLEDIDV 593

Query: 1274 IPNVEMLLTLSEKGYLKRMKPNTFTLQHRGTIGKSVGKMRVNDLMSDFIVCHTHDHILYF 1095
            IPN EMLL +SEKGY+KRMKPNTF LQ+RGTIGKSVGK+R +D MSDFIVCH HD +LYF
Sbjct: 594  IPNEEMLLAISEKGYVKRMKPNTFNLQNRGTIGKSVGKLRDSDAMSDFIVCHAHDRVLYF 653

Query: 1094 SDKGIVYSARAYKIPECSRTATGTPLVQLLSLSEGERITSIVPVSEFIDDQYLVMLTLNG 915
            SD+GIVYSA AYKIPEC+R A GTPL+Q LSLS+GERITSI+PVSEF++DQ+L+MLT+NG
Sbjct: 654  SDQGIVYSAPAYKIPECTRAAAGTPLIQFLSLSDGERITSIIPVSEFVEDQFLLMLTVNG 713

Query: 914  YIKKVSLKAFSAIRPSGIIAIQLVAGDELKWVRLCADADLVALASQKGMVIVNFCSKLRA 735
            YIKKVSL +FSAIR +GIIAIQLV GDELKWVR C + DLVA+ASQ GMVI+  C  +RA
Sbjct: 714  YIKKVSLNSFSAIRSTGIIAIQLVPGDELKWVRCCTNGDLVAMASQNGMVILTSCENIRA 773

Query: 734  LGRKTRGVISMKLK-GDKMASMDVIPASIQKDLQKLSENIYSRGKDLGPPWLLFVSESGH 558
            LGR TRG ++M+L+ GDK+ASMD+IPAS+QKDL+  S++  +  K  G PWLLFVSESGH
Sbjct: 774  LGRNTRGGVAMRLREGDKIASMDIIPASLQKDLEVASKDSENNNKGTG-PWLLFVSESGH 832

Query: 557  GKRVPLSAFRLSNFNRVGLLGYKLPPDCRLAAVYVVGFSLSATNEDGESDGQLVLVSQSG 378
            GKRVPLS+F+ S  NRVGL+GYK   +  LAAV+ VGFSL+   EDGESD Q+VLVSQSG
Sbjct: 833  GKRVPLSSFKQSRLNRVGLIGYKFFEEDHLAAVFAVGFSLT---EDGESDEQVVLVSQSG 889

Query: 377  TVNRIKVRDISIQSRASRGVILMRLEYAGKIQSASLISAS 258
            TVNRIKVRDISIQSR +RGVILMRLE+AGKIQS SLISA+
Sbjct: 890  TVNRIKVRDISIQSRFARGVILMRLEHAGKIQSTSLISAA 929


>gb|EMT22178.1| Putative DNA gyrase subunit A, chloroplastic/mitochondrial [Aegilops
            tauschii]
          Length = 934

 Score =  778 bits (2009), Expect = 0.0
 Identities = 405/581 (69%), Positives = 479/581 (82%), Gaps = 1/581 (0%)
 Frame = -3

Query: 1994 IKEIPYQTNKSALVEKIAELVEQKILDGISDIRDESDRFGMRVVIELKRGSDPSIVLNNL 1815
            I E+PYQTNKS LV++IAELVE K+L+GISDIRDESDR GMRVVIE+KRG++P+IVLNNL
Sbjct: 355  INEVPYQTNKSTLVQRIAELVEDKVLEGISDIRDESDRAGMRVVIEVKRGANPAIVLNNL 414

Query: 1814 YRHTALQSSFSCNMVGILDGQPKLMGLKELLQAFLDFRSSVIERRAAFKLSQALERKHII 1635
            YRHTALQSSFSCNMV ILDG PKLMGLKE+LQAFLDFR SVIERRA FKLSQALERKHI+
Sbjct: 415  YRHTALQSSFSCNMVAILDGHPKLMGLKEILQAFLDFRCSVIERRAKFKLSQALERKHIV 474

Query: 1634 EGIIIGLDNLDAIINIIRKTSSNTLAITSLVKEYHLSEKQAEAXXXXXXXXXXXXXXXKF 1455
            EGI+IGLDNLDA+I +IR+TS++T+A  +L KEY LSEKQAEA               KF
Sbjct: 475  EGIVIGLDNLDAVIQVIRETSNHTVAKEALAKEYGLSEKQAEALLDITLRKLTSLERKKF 534

Query: 1454 VDEAESLSDQIXXXXXXXXXXXLIFQLIEKEAIELKHKFGSPRRSFIEYSGSSQLEEIDV 1275
            +DEA SLS+ I           L+FQLIE+EA +LK KF +PRRSF+E S + +++++DV
Sbjct: 535  IDEANSLSESISKLNELLSSKKLMFQLIEQEAADLKSKFATPRRSFLEDSANGEVDDMDV 594

Query: 1274 IPNVEMLLTLSEKGYLKRMKPNTFTLQHRGTIGKSVGKMRVNDLMSDFIVCHTHDHILYF 1095
            IPN EMLL LSEKGYLKRM PNTF LQ+RGTIGKSVGKMR ND MSDFIVC THDH+LYF
Sbjct: 595  IPNEEMLLILSEKGYLKRMNPNTFNLQNRGTIGKSVGKMRTNDNMSDFIVCQTHDHVLYF 654

Query: 1094 SDKGIVYSARAYKIPECSRTATGTPLVQLLSLSEGERITSIVPVSEFIDDQYLVMLTLNG 915
            SDKGIVYS RAYKIPEC+R A GTPLVQLL+LS+GERITSIVPV++F++DQYLVMLT+NG
Sbjct: 655  SDKGIVYSERAYKIPECTRVAAGTPLVQLLNLSDGERITSIVPVNKFVEDQYLVMLTVNG 714

Query: 914  YIKKVSLKAFSAIRPSGIIAIQLVAGDELKWVRLCADADLVALASQKGMVIVNFCSKLRA 735
            YIKKV L AF++IR +GII+++LV GDELKWVRLC D DLVALASQ GMVIVN C++LR 
Sbjct: 715  YIKKVPLNAFASIRSTGIISMRLVPGDELKWVRLCRDDDLVALASQSGMVIVNTCNRLRP 774

Query: 734  LGRKTRGVISMKLK-GDKMASMDVIPASIQKDLQKLSENIYSRGKDLGPPWLLFVSESGH 558
             GR TRG+ +M+LK  DKMA+MD+IP++       +     SR +DL PPWLLF++E+G+
Sbjct: 775  HGRTTRGMGAMRLKEDDKMAAMDIIPST----THTMPGKTVSRVRDLSPPWLLFIAENGY 830

Query: 557  GKRVPLSAFRLSNFNRVGLLGYKLPPDCRLAAVYVVGFSLSATNEDGESDGQLVLVSQSG 378
            GKRVPL+AFR S+FNRVGL GYKLP DCRLAAV+VVG       +D  S+ Q+VLVS  G
Sbjct: 831  GKRVPLNAFRQSSFNRVGLRGYKLPEDCRLAAVFVVG----EPTDDDASEEQVVLVSHGG 886

Query: 377  TVNRIKVRDISIQSRASRGVILMRLEYAGKIQSASLISASA 255
            TVNRIKV+DISIQ R ++GVILMRLE+AGKIQSASLISA+A
Sbjct: 887  TVNRIKVKDISIQGRGAKGVILMRLEHAGKIQSASLISAAA 927


>ref|XP_006485535.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Citrus sinensis]
          Length = 942

 Score =  776 bits (2004), Expect = 0.0
 Identities = 405/580 (69%), Positives = 475/580 (81%), Gaps = 1/580 (0%)
 Frame = -3

Query: 1994 IKEIPYQTNKSALVEKIAELVEQKILDGISDIRDESDRFGMRVVIELKRGSDPSIVLNNL 1815
            IKEIPYQTNKS LVEKIAELVE K LDGISDIRDESDR GMR+VIELKRG+DPSIV+N+L
Sbjct: 339  IKEIPYQTNKSMLVEKIAELVENKTLDGISDIRDESDRSGMRIVIELKRGADPSIVVNSL 398

Query: 1814 YRHTALQSSFSCNMVGILDGQPKLMGLKELLQAFLDFRSSVIERRAAFKLSQALERKHII 1635
            YR TALQSSFSCNMVGILDGQPK MGLKE+LQAFLDFR SV+ERRA FKLSQ  ER+HI+
Sbjct: 399  YRLTALQSSFSCNMVGILDGQPKQMGLKEVLQAFLDFRCSVVERRARFKLSQVKERRHIV 458

Query: 1634 EGIIIGLDNLDAIINIIRKTSSNTLAITSLVKEYHLSEKQAEAXXXXXXXXXXXXXXXKF 1455
            EGI++GLDNLD +I I+R+  SN+ A  +L  E+ LSEKQA+A               KF
Sbjct: 459  EGIMVGLDNLDRVIRIVREAPSNSTASAALKDEFKLSEKQADAILDMNLRRLTMLERKKF 518

Query: 1454 VDEAESLSDQIXXXXXXXXXXXLIFQLIEKEAIELKHKFGSPRRSFIEYSGSSQLEEIDV 1275
            VDE+++L +QI            I QLIE+EAIELK++F +PR S +E + S QL++ID+
Sbjct: 519  VDESKTLMEQILKLEELLSSRKNILQLIEQEAIELKNRFSTPRLSMLEDADSGQLDDIDI 578

Query: 1274 IPNVEMLLTLSEKGYLKRMKPNTFTLQHRGTIGKSVGKMRVNDLMSDFIVCHTHDHILYF 1095
            IPN EMLL +SEKGY+KRMKPNTF LQ+RGTIGKSVGK+RVND MSDFIVC  HDH+LYF
Sbjct: 579  IPNDEMLLAISEKGYVKRMKPNTFNLQNRGTIGKSVGKLRVNDAMSDFIVCRAHDHVLYF 638

Query: 1094 SDKGIVYSARAYKIPECSRTATGTPLVQLLSLSEGERITSIVPVSEFIDDQYLVMLTLNG 915
            SD+GIVYSARAYKIPEC+R A GTPLVQ+LSLS+GERITSI+PVSEF  DQ+LVMLT+NG
Sbjct: 639  SDRGIVYSARAYKIPECTRNAAGTPLVQILSLSDGERITSIIPVSEFAGDQFLVMLTMNG 698

Query: 914  YIKKVSLKAFSAIRPSGIIAIQLVAGDELKWVRLCADADLVALASQKGMVIVNFCSKLRA 735
            YIKKVSL  FS+IR +GIIAIQLV GDELKWVR C + DLVA+ASQ GMVI++ C  +R+
Sbjct: 699  YIKKVSLNLFSSIRTTGIIAIQLVPGDELKWVRCCTNDDLVAMASQNGMVILSSCDIIRS 758

Query: 734  LGRKTRGVISMKLK-GDKMASMDVIPASIQKDLQKLSENIYSRGKDLGPPWLLFVSESGH 558
            L R TRG ++M+LK GDKMASMD+IPA++ KDL++  E+ +S  K    PWLLFVSESGH
Sbjct: 759  LSRNTRGSVAMRLKDGDKMASMDIIPAALHKDLERTPEDSHSNVKGSSGPWLLFVSESGH 818

Query: 557  GKRVPLSAFRLSNFNRVGLLGYKLPPDCRLAAVYVVGFSLSATNEDGESDGQLVLVSQSG 378
            GKRVPLS+FR    NRVGL+GYK   + RLAAV+VVGFSL+   EDGESD Q+VLVSQSG
Sbjct: 819  GKRVPLSSFRKLPLNRVGLIGYKFSAEDRLAAVFVVGFSLA---EDGESDEQVVLVSQSG 875

Query: 377  TVNRIKVRDISIQSRASRGVILMRLEYAGKIQSASLISAS 258
            TVNRIKVRDISIQ+R +RGVILMRLE +GKIQSASLIS +
Sbjct: 876  TVNRIKVRDISIQARYARGVILMRLELSGKIQSASLISVT 915


>sp|Q5YLB5.1|GYRA_NICBE RecName: Full=DNA gyrase subunit A, chloroplastic/mitochondrial;
            Flags: Precursor gi|38017093|gb|AAR07942.1| DNA gyrase A
            subunit [Nicotiana benthamiana]
          Length = 935

 Score =  774 bits (1998), Expect = 0.0
 Identities = 411/588 (69%), Positives = 477/588 (81%), Gaps = 1/588 (0%)
 Frame = -3

Query: 1994 IKEIPYQTNKSALVEKIAELVEQKILDGISDIRDESDRFGMRVVIELKRGSDPSIVLNNL 1815
            I+EIPYQTNK++LVEKIA+LVE KIL+G+SDIRDESDR GMR+VIELKRGSDP+IVLNNL
Sbjct: 345  IQEIPYQTNKASLVEKIADLVENKILEGVSDIRDESDRSGMRIVIELKRGSDPAIVLNNL 404

Query: 1814 YRHTALQSSFSCNMVGILDGQPKLMGLKELLQAFLDFRSSVIERRAAFKLSQALERKHII 1635
            YR TALQSSFSCNMVGIL+GQPKLMGLKELLQAFLDFR SV+ERRA FKLSQA ER HI+
Sbjct: 405  YRLTALQSSFSCNMVGILNGQPKLMGLKELLQAFLDFRCSVVERRARFKLSQAQERNHIV 464

Query: 1634 EGIIIGLDNLDAIINIIRKTSSNTLAITSLVKEYHLSEKQAEAXXXXXXXXXXXXXXXKF 1455
            EGII+GLDNLD +IN IRK SSN LA  SL KE+ LSEKQAEA               KF
Sbjct: 465  EGIIVGLDNLDEVINTIRKASSNALAAASLRKEFELSEKQAEAILDISLRRLTALERNKF 524

Query: 1454 VDEAESLSDQIXXXXXXXXXXXLIFQLIEKEAIELKHKFGSPRRSFIEYSGSSQLEEIDV 1275
            V+E +SL  QI            I QLIE+EAIE+K+KF +PRRS +E + S  LE+IDV
Sbjct: 525  VEEGKSLRTQISKLEELLSSKKQILQLIEEEAIEIKNKFFNPRRSMLEDTDSGDLEDIDV 584

Query: 1274 IPNVEMLLTLSEKGYLKRMKPNTFTLQHRGTIGKSVGKMRVNDLMSDFIVCHTHDHILYF 1095
            IPN EMLL +SEKGY+KRMKP+TF LQ+RGTIGKSVGK+RVND MSDF+VC  HD +LYF
Sbjct: 585  IPNEEMLLAISEKGYVKRMKPDTFNLQNRGTIGKSVGKLRVNDAMSDFLVCRAHDKVLYF 644

Query: 1094 SDKGIVYSARAYKIPECSRTATGTPLVQLLSLSEGERITSIVPVSEFIDDQYLVMLTLNG 915
            SDKG VYS+ AYKIPECSRTA GTPLVQ+LSLS+GERITSI+PVSEF  DQYLVMLT+NG
Sbjct: 645  SDKGTVYSSPAYKIPECSRTAAGTPLVQILSLSDGERITSIIPVSEFAADQYLVMLTVNG 704

Query: 914  YIKKVSLKAFSAIRPSGIIAIQLVAGDELKWVRLCADADLVALASQKGMVIVNFCSKLRA 735
            YIKKVSL  F++IR +GIIAIQLV  DELKWV+ C++ D VA+ASQ GMVI+  C+ +RA
Sbjct: 705  YIKKVSLNYFASIRCTGIIAIQLVPDDELKWVKCCSNNDFVAMASQNGMVILTPCANIRA 764

Query: 734  LGRKTRGVISMKLK-GDKMASMDVIPASIQKDLQKLSENIYSRGKDLGPPWLLFVSESGH 558
            LGR TRG ++M+LK GDK+ASMD+IP ++QK+L K  E    + + +  PWLLFVSESG+
Sbjct: 765  LGRNTRGSVAMRLKEGDKVASMDIIPDALQKELDKTLEVQQRQYRSMKGPWLLFVSESGY 824

Query: 557  GKRVPLSAFRLSNFNRVGLLGYKLPPDCRLAAVYVVGFSLSATNEDGESDGQLVLVSQSG 378
            GKRVP+S FR S  NRVGL GYK   +  LAAV+VVGFSL    EDGESD Q+VLVSQSG
Sbjct: 825  GKRVPVSRFRTSPLNRVGLFGYKFSSEDCLAAVFVVGFSL---GEDGESDEQVVLVSQSG 881

Query: 377  TVNRIKVRDISIQSRASRGVILMRLEYAGKIQSASLISASADNVGDDD 234
            TVNRIKVRDISIQSR +RGVILMRLE+AGKIQSASLISA+  +  D+D
Sbjct: 882  TVNRIKVRDISIQSRYARGVILMRLEHAGKIQSASLISAADADPEDED 929


>ref|XP_004308178.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Fragaria vesca subsp. vesca]
          Length = 939

 Score =  773 bits (1997), Expect = 0.0
 Identities = 408/580 (70%), Positives = 477/580 (82%), Gaps = 1/580 (0%)
 Frame = -3

Query: 1994 IKEIPYQTNKSALVEKIAELVEQKILDGISDIRDESDRFGMRVVIELKRGSDPSIVLNNL 1815
            IKEIPYQTNK+ALVEKIA+LVE KILDGISDIRDESDR GMRVVIELKRGSDPSIVLNNL
Sbjct: 347  IKEIPYQTNKAALVEKIAQLVENKILDGISDIRDESDRTGMRVVIELKRGSDPSIVLNNL 406

Query: 1814 YRHTALQSSFSCNMVGILDGQPKLMGLKELLQAFLDFRSSVIERRAAFKLSQALERKHII 1635
            YR T+LQSSFSCNMVGIL+GQPKLMGLKELLQAFLDFR SVIERRA FKLSQA +R+HI+
Sbjct: 407  YRLTSLQSSFSCNMVGILNGQPKLMGLKELLQAFLDFRCSVIERRAKFKLSQAQDRRHIV 466

Query: 1634 EGIIIGLDNLDAIINIIRKTSSNTLAITSLVKEYHLSEKQAEAXXXXXXXXXXXXXXXKF 1455
            EGI +GLDNL  ++ I  + S+NT+A + L  E++LSEKQAEA               KF
Sbjct: 467  EGIAVGLDNLQRVMRISLEASNNTIASSLLRNEFNLSEKQAEAILDFNFRRLNVLERKKF 526

Query: 1454 VDEAESLSDQIXXXXXXXXXXXLIFQLIEKEAIELKHKFGSPRRSFIEYSGSSQLEEIDV 1275
             +E+ESL +QI            I Q++E+EAI++K+KF +PRRS +E S   QL++IDV
Sbjct: 527  DNESESLKEQISKLEELLSSKKRILQVVEQEAIDIKNKFANPRRSMLEDSDGGQLDDIDV 586

Query: 1274 IPNVEMLLTLSEKGYLKRMKPNTFTLQHRGTIGKSVGKMRVNDLMSDFIVCHTHDHILYF 1095
            IPN EMLL  SEKGY+KRMKPNTF LQ+RGTIGKSVGK+RVND MSDFIVCH HDH+L+F
Sbjct: 587  IPNDEMLLAFSEKGYVKRMKPNTFNLQNRGTIGKSVGKLRVNDAMSDFIVCHAHDHVLFF 646

Query: 1094 SDKGIVYSARAYKIPECSRTATGTPLVQLLSLSEGERITSIVPVSEFIDDQYLVMLTLNG 915
            SDKG VYSARAYKIPECSRTA GTPLVQ+LSLS+GERITS++PVSEF  DQ+L+MLT+NG
Sbjct: 647  SDKGTVYSARAYKIPECSRTAAGTPLVQILSLSDGERITSVIPVSEFAGDQFLLMLTVNG 706

Query: 914  YIKKVSLKAFSAIRPSGIIAIQLVAGDELKWVRLCADADLVALASQKGMVIVNFCSKLRA 735
            YIKKVSL +FS+IR +GIIAIQLV GDELKWVR C + DLVA+AS  GMVI+     +RA
Sbjct: 707  YIKKVSLSSFSSIRSTGIIAIQLVPGDELKWVRCCTNDDLVAMASLNGMVILCSSDIIRA 766

Query: 734  LGRKTRGVISMKLK-GDKMASMDVIPASIQKDLQKLSENIYSRGKDLGPPWLLFVSESGH 558
            LGR TRG ++M+LK GDKMAS+D+IPA++ KDL+++SE   S  + L  PWLLFVSESG+
Sbjct: 767  LGRNTRGSVAMRLKEGDKMASVDIIPAAMWKDLKRVSEAPESTARSLDGPWLLFVSESGY 826

Query: 557  GKRVPLSAFRLSNFNRVGLLGYKLPPDCRLAAVYVVGFSLSATNEDGESDGQLVLVSQSG 378
            GKRVPLS F  S  NRVGL+GYK   + RLAAV+VVGFSL+   EDGESD Q+VLVSQSG
Sbjct: 827  GKRVPLSRFHSSRLNRVGLIGYKFSSEDRLAAVFVVGFSLA---EDGESDEQVVLVSQSG 883

Query: 377  TVNRIKVRDISIQSRASRGVILMRLEYAGKIQSASLISAS 258
            TVNRIKVRDISIQSR +RGVILMRL+ AGKIQSASL+SA+
Sbjct: 884  TVNRIKVRDISIQSRYARGVILMRLDLAGKIQSASLMSAT 923


>ref|XP_006296680.1| hypothetical protein CARUB_v10012909mg [Capsella rubella]
            gi|482565389|gb|EOA29578.1| hypothetical protein
            CARUB_v10012909mg [Capsella rubella]
          Length = 950

 Score =  769 bits (1985), Expect = 0.0
 Identities = 399/580 (68%), Positives = 476/580 (82%), Gaps = 1/580 (0%)
 Frame = -3

Query: 1994 IKEIPYQTNKSALVEKIAELVEQKILDGISDIRDESDRFGMRVVIELKRGSDPSIVLNNL 1815
            I EIPYQTNK+ LV+KIAELVE K L+GISDIRDESDR GMRVVIELKRG DP++VLNNL
Sbjct: 356  ITEIPYQTNKATLVQKIAELVENKTLEGISDIRDESDRNGMRVVIELKRGGDPALVLNNL 415

Query: 1814 YRHTALQSSFSCNMVGILDGQPKLMGLKELLQAFLDFRSSVIERRAAFKLSQALERKHII 1635
            YRHTALQSSFSCNMVGI DG+PKLMGLKELLQAF+DFR SV+ERRA FKLS A +RKHII
Sbjct: 416  YRHTALQSSFSCNMVGICDGEPKLMGLKELLQAFIDFRCSVVERRARFKLSHAQQRKHII 475

Query: 1634 EGIIIGLDNLDAIINIIRKTSSNTLAITSLVKEYHLSEKQAEAXXXXXXXXXXXXXXXKF 1455
            EGI++GLDN+D +I +I+  +S++ A T+L  EY LSEKQA+A               KF
Sbjct: 476  EGIVVGLDNMDKVIQLIKNATSHSSAATALQSEYGLSEKQADAILEISLRRLTALERKKF 535

Query: 1454 VDEAESLSDQIXXXXXXXXXXXLIFQLIEKEAIELKHKFGSPRRSFIEYSGSSQLEEIDV 1275
             DE+ SL++QI            I +LIE+EAIELK +F SPRRS +E S S  LE+IDV
Sbjct: 536  TDESSSLTEQITKLEQLLSTRTNILKLIEQEAIELKDRFSSPRRSMLEDSDSGDLEDIDV 595

Query: 1274 IPNVEMLLTLSEKGYLKRMKPNTFTLQHRGTIGKSVGKMRVNDLMSDFIVCHTHDHILYF 1095
            IPN EML+ +SEKGY+KRMKP+TF LQHRGTIGKSVGK+RV+D MSDF+VCH HDH+L+F
Sbjct: 596  IPNEEMLMAISEKGYVKRMKPDTFNLQHRGTIGKSVGKLRVDDAMSDFLVCHAHDHVLFF 655

Query: 1094 SDKGIVYSARAYKIPECSRTATGTPLVQLLSLSEGERITSIVPVSEFIDDQYLVMLTLNG 915
            SD+GIVYS RAYKIPECSR A GTPLVQ+LS+SEGER+TSIVPVSEF +D+YL+MLT+NG
Sbjct: 656  SDRGIVYSTRAYKIPECSRNAAGTPLVQILSMSEGERVTSIVPVSEFAEDRYLLMLTVNG 715

Query: 914  YIKKVSLKAFSAIRPSGIIAIQLVAGDELKWVRLCADADLVALASQKGMVIVNFCSKLRA 735
             IKKVSLK FS IR +GIIAIQL +GDELKWVR C+  DLVA+ASQ GMV+++ C  +R 
Sbjct: 716  CIKKVSLKLFSGIRSTGIIAIQLNSGDELKWVRCCSSDDLVAMASQNGMVVLSTCDGVRT 775

Query: 734  LGRKTRGVISMKL-KGDKMASMDVIPASIQKDLQKLSENIYSRGKDLGPPWLLFVSESGH 558
            L R T+GV +M+L K DKMASMD+IP+S++KD+++ SE+I +  +  G PWLLFV E+G+
Sbjct: 776  LSRNTKGVTAMRLKKEDKMASMDIIPSSLRKDMEEKSEDISTVKQSTG-PWLLFVCENGY 834

Query: 557  GKRVPLSAFRLSNFNRVGLLGYKLPPDCRLAAVYVVGFSLSATNEDGESDGQLVLVSQSG 378
            GKRVPLS+FR S  NRVGLLGYK   D RLAAV+VVG+SL+   EDGESD Q+VLVSQSG
Sbjct: 835  GKRVPLSSFRRSRLNRVGLLGYKFAEDDRLAAVFVVGYSLA---EDGESDEQVVLVSQSG 891

Query: 377  TVNRIKVRDISIQSRASRGVILMRLEYAGKIQSASLISAS 258
            TVNRIKVRDISIQSR +RGVILMRL++AGKIQSASLISA+
Sbjct: 892  TVNRIKVRDISIQSRRARGVILMRLDHAGKIQSASLISAA 931


>ref|XP_004146774.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Cucumis sativus]
          Length = 923

 Score =  765 bits (1976), Expect = 0.0
 Identities = 407/580 (70%), Positives = 470/580 (81%), Gaps = 1/580 (0%)
 Frame = -3

Query: 1994 IKEIPYQTNKSALVEKIAELVEQKILDGISDIRDESDRFGMRVVIELKRGSDPSIVLNNL 1815
            IKEIPYQTNKSALVE+IAELVE K LDGISDIRDESDR GMR+VIELKRG+DPSIV NNL
Sbjct: 344  IKEIPYQTNKSALVERIAELVENKTLDGISDIRDESDRTGMRIVIELKRGADPSIVQNNL 403

Query: 1814 YRHTALQSSFSCNMVGILDGQPKLMGLKELLQAFLDFRSSVIERRAAFKLSQALERKHII 1635
            YR T+LQSSFSCNMVGI++GQPKLMGLKELLQAFLDFR SV+ERRA FKL  A ER+HI+
Sbjct: 404  YRLTSLQSSFSCNMVGIINGQPKLMGLKELLQAFLDFRCSVVERRARFKLLHAQERRHIV 463

Query: 1634 EGIIIGLDNLDAIINIIRKTSSNTLAITSLVKEYHLSEKQAEAXXXXXXXXXXXXXXXKF 1455
            EGI+IGLDNLD +I +IR+ SS+++A  SL  +++LSEKQAEA               KF
Sbjct: 464  EGIVIGLDNLDGVIRLIREASSHSIASASLRTQFNLSEKQAEAVLDINLRRLTHLERKKF 523

Query: 1454 VDEAESLSDQIXXXXXXXXXXXLIFQLIEKEAIELKHKFGSPRRSFIEYSGSSQLEEIDV 1275
            +DE++SL + I            I QLIE+EA ELK KF +PRRS +E + S Q+E+IDV
Sbjct: 524  IDESKSLMENISKLEELLSSRNNILQLIEQEATELKDKFPNPRRSVLEDTDSGQVEDIDV 583

Query: 1274 IPNVEMLLTLSEKGYLKRMKPNTFTLQHRGTIGKSVGKMRVNDLMSDFIVCHTHDHILYF 1095
            IPN EMLL  SEKGY+KRMKPNTF LQHRGTIGKSVGK+RVND MSDFIVC  HDH+LYF
Sbjct: 584  IPNEEMLLAFSEKGYVKRMKPNTFNLQHRGTIGKSVGKLRVNDAMSDFIVCRAHDHVLYF 643

Query: 1094 SDKGIVYSARAYKIPECSRTATGTPLVQLLSLSEGERITSIVPVSEFIDDQYLVMLTLNG 915
            SDKGIVYSARAYKIPEC RTA GTPLVQ+LSLS+GERITSI+PVSEF  DQ+L+MLT  G
Sbjct: 644  SDKGIVYSARAYKIPECGRTAAGTPLVQVLSLSDGERITSIIPVSEFEGDQFLLMLTAYG 703

Query: 914  YIKKVSLKAFSAIRPSGIIAIQLVAGDELKWVRLCADADLVALASQKGMVIVNFCSKLRA 735
            YIKKVSL  FS+IR +GIIAIQLV+GDELKWVR C + +LVA+ASQ GMVI++ C  +RA
Sbjct: 704  YIKKVSLNFFSSIRSTGIIAIQLVSGDELKWVRRCTNDNLVAMASQNGMVILSSCDTIRA 763

Query: 734  LGRKTRGVISMKLK-GDKMASMDVIPASIQKDLQKLSENIYSRGKDLGPPWLLFVSESGH 558
            LGR TRG ++MKLK GDKMASMD+IPA++  DL++ S       K    PWLLFVSESG 
Sbjct: 764  LGRNTRGSVAMKLKTGDKMASMDIIPAAVWNDLERNS------SKSSNGPWLLFVSESGV 817

Query: 557  GKRVPLSAFRLSNFNRVGLLGYKLPPDCRLAAVYVVGFSLSATNEDGESDGQLVLVSQSG 378
            GKRVPL +FRLS   RVGL+G K     RLAAV+VVGFSL+   EDGESD Q+VLVSQSG
Sbjct: 818  GKRVPLKSFRLSPLRRVGLIGCKFSSQDRLAAVFVVGFSLA---EDGESDEQVVLVSQSG 874

Query: 377  TVNRIKVRDISIQSRASRGVILMRLEYAGKIQSASLISAS 258
            TVNRIKVRD+SIQSR +RGVILMRL++AGKIQSASLISA+
Sbjct: 875  TVNRIKVRDVSIQSRFARGVILMRLDHAGKIQSASLISAA 914


>gb|ESW25277.1| hypothetical protein PHAVU_003G022300g [Phaseolus vulgaris]
          Length = 942

 Score =  765 bits (1975), Expect = 0.0
 Identities = 400/580 (68%), Positives = 474/580 (81%), Gaps = 1/580 (0%)
 Frame = -3

Query: 1994 IKEIPYQTNKSALVEKIAELVEQKILDGISDIRDESDRFGMRVVIELKRGSDPSIVLNNL 1815
            IKEIPYQTNK++LVEKIAE+VE K LDGISDIRDESDR GMR+VIELKRGSDP IVLNNL
Sbjct: 353  IKEIPYQTNKASLVEKIAEVVENKSLDGISDIRDESDRSGMRIVIELKRGSDPLIVLNNL 412

Query: 1814 YRHTALQSSFSCNMVGILDGQPKLMGLKELLQAFLDFRSSVIERRAAFKLSQALERKHII 1635
            YR T+LQS+FSCNMVGIL+GQPK MGLKELLQAFLDFR SV+ERRA FKLSQA  RKHI+
Sbjct: 413  YRLTSLQSTFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRAMFKLSQARGRKHIV 472

Query: 1634 EGIIIGLDNLDAIINIIRKTSSNTLAITSLVKEYHLSEKQAEAXXXXXXXXXXXXXXXKF 1455
            EGI+IG DNLD +I IIR+ SSN+ A   L   + LSEKQAEA                F
Sbjct: 473  EGILIGFDNLDEVIRIIREASSNSAAAVGLRNAFSLSEKQAEALLDMSLRRLTLRESGNF 532

Query: 1454 VDEAESLSDQIXXXXXXXXXXXLIFQLIEKEAIELKHKFGSPRRSFIEYSGSSQLEEIDV 1275
            V E++SL +QI            I +LIE+EAIELK+KF +PRRS +E + + QLE+IDV
Sbjct: 533  VAESKSLMEQISKLEELLSSRKNILELIEQEAIELKNKFANPRRSMLEDTDNGQLEDIDV 592

Query: 1274 IPNVEMLLTLSEKGYLKRMKPNTFTLQHRGTIGKSVGKMRVNDLMSDFIVCHTHDHILYF 1095
            IPN +MLL +SEKGYLKRMKP+TF LQ+RGTIGKSVGK+RVND MSDF+VC  HDH+LYF
Sbjct: 593  IPNEDMLLAVSEKGYLKRMKPSTFNLQNRGTIGKSVGKLRVNDSMSDFLVCRAHDHVLYF 652

Query: 1094 SDKGIVYSARAYKIPECSRTATGTPLVQLLSLSEGERITSIVPVSEFIDDQYLVMLTLNG 915
            SDKG VYSARAYK+PECSRTA GTPLV +LSLS+GERITSI+PVSEF++DQ+L+MLT+ G
Sbjct: 653  SDKGTVYSARAYKVPECSRTAAGTPLVHILSLSDGERITSIIPVSEFVEDQFLLMLTMQG 712

Query: 914  YIKKVSLKAFSAIRPSGIIAIQLVAGDELKWVRLCADADLVALASQKGMVIVNFCSKLRA 735
            YIK+VSL  FS+IR +GIIAIQLV GDELKWVRLC++ D VA+AS  GMV++  CSK+R 
Sbjct: 713  YIKRVSLNLFSSIRSTGIIAIQLVPGDELKWVRLCSNDDFVAMASHNGMVMLCQCSKIRT 772

Query: 734  LGRKTRGVISMKLK-GDKMASMDVIPASIQKDLQKLSENIYSRGKDLGPPWLLFVSESGH 558
            L R TRG ++M+LK GD MAS+D+IPA++  +L+ LS+   + GK    PWLLFVSE+GH
Sbjct: 773  LSRNTRGSLAMRLKNGDSMASVDIIPAAMWNNLETLSKYPDNSGKGQKGPWLLFVSENGH 832

Query: 557  GKRVPLSAFRLSNFNRVGLLGYKLPPDCRLAAVYVVGFSLSATNEDGESDGQLVLVSQSG 378
            GKRVPLS+FR+S+ NRVGL+GYK   + RLAAV+VVGFS   + EDGESD Q+VLVSQ+G
Sbjct: 833  GKRVPLSSFRVSSLNRVGLVGYKFSAEDRLAAVFVVGFS---SAEDGESDEQVVLVSQTG 889

Query: 377  TVNRIKVRDISIQSRASRGVILMRLEYAGKIQSASLISAS 258
            TVNRIKVRDISIQSR +RGVILMRL+YAGKIQSASLISA+
Sbjct: 890  TVNRIKVRDISIQSRFARGVILMRLDYAGKIQSASLISAT 929


>ref|XP_006587249.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Glycine max]
          Length = 935

 Score =  764 bits (1972), Expect = 0.0
 Identities = 400/580 (68%), Positives = 471/580 (81%), Gaps = 1/580 (0%)
 Frame = -3

Query: 1994 IKEIPYQTNKSALVEKIAELVEQKILDGISDIRDESDRFGMRVVIELKRGSDPSIVLNNL 1815
            IKEIPYQTNK+ LVEKIAELVE K LDGISDIRDESDR GMR+VIELKRGSDP IVLNNL
Sbjct: 346  IKEIPYQTNKATLVEKIAELVENKSLDGISDIRDESDRSGMRIVIELKRGSDPLIVLNNL 405

Query: 1814 YRHTALQSSFSCNMVGILDGQPKLMGLKELLQAFLDFRSSVIERRAAFKLSQALERKHII 1635
            YR T+LQS+FSCNMVGIL+GQPK MGLKELLQAFLDFR SV+ERRA FKLSQA ER+HI+
Sbjct: 406  YRLTSLQSTFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRARFKLSQAQERRHIV 465

Query: 1634 EGIIIGLDNLDAIINIIRKTSSNTLAITSLVKEYHLSEKQAEAXXXXXXXXXXXXXXXKF 1455
            EGI+IG DNLD +I IIR+ SSN+ A   L   + LSEKQAEA                F
Sbjct: 466  EGILIGFDNLDGVIRIIREASSNSAAAAGLRNAFSLSEKQAEALLDISLRRLSLRESGNF 525

Query: 1454 VDEAESLSDQIXXXXXXXXXXXLIFQLIEKEAIELKHKFGSPRRSFIEYSGSSQLEEIDV 1275
            V E++SL +QI            I +LIE+EAIELK KF +PRRS +E + + QLE+IDV
Sbjct: 526  VAESKSLMEQISKLEELLSSRKNILELIEQEAIELKSKFSNPRRSMLEDTDNGQLEDIDV 585

Query: 1274 IPNVEMLLTLSEKGYLKRMKPNTFTLQHRGTIGKSVGKMRVNDLMSDFIVCHTHDHILYF 1095
            IPN EM+L LSEKGY+KRMKP+TF LQ+RGTIGKSVGK++VND MSDF+VCH HDH+LYF
Sbjct: 586  IPNEEMILALSEKGYMKRMKPSTFNLQNRGTIGKSVGKLKVNDSMSDFLVCHAHDHVLYF 645

Query: 1094 SDKGIVYSARAYKIPECSRTATGTPLVQLLSLSEGERITSIVPVSEFIDDQYLVMLTLNG 915
            SDKG VYSARAYKIPECSRTA GTPLVQ+LSLS+GERITSI+PVSEF +DQ+L+MLT+ G
Sbjct: 646  SDKGTVYSARAYKIPECSRTAAGTPLVQILSLSDGERITSIIPVSEFAEDQFLLMLTMQG 705

Query: 914  YIKKVSLKAFSAIRPSGIIAIQLVAGDELKWVRLCADADLVALASQKGMVIVNFCSKLRA 735
            YIK+VSL  FS+IR  GIIAIQLV GDELKWVRLC++ D VA+AS  GMV+++ CSK+R 
Sbjct: 706  YIKRVSLNLFSSIRSIGIIAIQLVPGDELKWVRLCSNDDFVAMASHNGMVMLSQCSKIRT 765

Query: 734  LGRKTRGVISMKL-KGDKMASMDVIPASIQKDLQKLSENIYSRGKDLGPPWLLFVSESGH 558
            L R TRG  +M+L KGDKMAS+D+IPA++  +L+  S+      K    PWLLFVSE+G+
Sbjct: 766  LSRNTRGAPAMRLKKGDKMASVDIIPAAMWNNLETTSKFPGINAKSQNGPWLLFVSENGY 825

Query: 557  GKRVPLSAFRLSNFNRVGLLGYKLPPDCRLAAVYVVGFSLSATNEDGESDGQLVLVSQSG 378
            GKRVPLS+FR+S+ NRVGL+GYK   + RLAAV+VVGFS   + EDGESD Q+VLVSQSG
Sbjct: 826  GKRVPLSSFRISSLNRVGLIGYKFSAEDRLAAVFVVGFS---SAEDGESDEQVVLVSQSG 882

Query: 377  TVNRIKVRDISIQSRASRGVILMRLEYAGKIQSASLISAS 258
            TVNRIKVRDISIQSR +RGVILMRL+++GKIQSASLISA+
Sbjct: 883  TVNRIKVRDISIQSRFARGVILMRLDHSGKIQSASLISAT 922