BLASTX nr result
ID: Zingiber23_contig00016977
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00016977
(726 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006658068.1| PREDICTED: chromodomain-helicase-DNA-binding... 62 2e-07
ref|XP_006658067.1| PREDICTED: chromodomain-helicase-DNA-binding... 62 2e-07
ref|XP_004958583.1| PREDICTED: chromodomain-helicase-DNA-binding... 61 3e-07
ref|XP_004958582.1| PREDICTED: chromodomain-helicase-DNA-binding... 61 3e-07
ref|XP_004958581.1| PREDICTED: chromodomain-helicase-DNA-binding... 61 3e-07
ref|XP_004958580.1| PREDICTED: chromodomain-helicase-DNA-binding... 61 3e-07
tpg|DAA41662.1| TPA: putative chromodomain helicase DNA binding ... 60 6e-07
tpg|DAA63992.1| TPA: putative chromodomain helicase DNA binding ... 60 7e-07
dbj|BAC81164.1| chromodomain-helicase-DNA-binding protein-like p... 60 9e-07
gb|EEE67748.1| hypothetical protein OsJ_25446 [Oryza sativa Japo... 60 9e-07
gb|EEC82618.1| hypothetical protein OsI_27196 [Oryza sativa Indi... 60 9e-07
dbj|BAJ95080.1| predicted protein [Hordeum vulgare subsp. vulgare] 58 3e-06
ref|XP_003562521.1| PREDICTED: chromodomain-helicase-DNA-binding... 58 4e-06
ref|XP_002463329.1| hypothetical protein SORBIDRAFT_02g041910 [S... 57 6e-06
>ref|XP_006658068.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
X2 [Oryza brachyantha]
Length = 1731
Score = 62.0 bits (149), Expect = 2e-07
Identities = 31/49 (63%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = -1
Query: 705 PSMISNGIRLGEPMSSAGILGKGPSEMRRYPNDRSTR-AHPGRFPPGQG 562
P +++NG RL E SSAGILG GP EMRRY N+R R HP RFPPG G
Sbjct: 1680 PPIMTNGNRLQESSSSAGILGWGPVEMRRYGNERPKRGVHPSRFPPGHG 1728
>ref|XP_006658067.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
X1 [Oryza brachyantha]
Length = 1732
Score = 62.0 bits (149), Expect = 2e-07
Identities = 31/49 (63%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = -1
Query: 705 PSMISNGIRLGEPMSSAGILGKGPSEMRRYPNDRSTR-AHPGRFPPGQG 562
P +++NG RL E SSAGILG GP EMRRY N+R R HP RFPPG G
Sbjct: 1681 PPIMTNGNRLQESSSSAGILGWGPVEMRRYGNERPKRGVHPSRFPPGHG 1729
>ref|XP_004958583.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
X4 [Setaria italica]
Length = 1693
Score = 61.2 bits (147), Expect = 3e-07
Identities = 34/56 (60%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = -1
Query: 726 LLQPQSHPSMISNGIRLGEPMSSAGILGKGPSEMRRYPNDRSTR-AHPGRFPPGQG 562
L QP P M++NG RL EP SSAGILG GP EMRRY N+R R HP FP G G
Sbjct: 1638 LYQP---PPMMTNGNRLQEPGSSAGILGWGPVEMRRYGNERPKRGVHPSHFPAGHG 1690
>ref|XP_004958582.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
X3 [Setaria italica]
Length = 1719
Score = 61.2 bits (147), Expect = 3e-07
Identities = 34/56 (60%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = -1
Query: 726 LLQPQSHPSMISNGIRLGEPMSSAGILGKGPSEMRRYPNDRSTR-AHPGRFPPGQG 562
L QP P M++NG RL EP SSAGILG GP EMRRY N+R R HP FP G G
Sbjct: 1664 LYQP---PPMMTNGNRLQEPGSSAGILGWGPVEMRRYGNERPKRGVHPSHFPAGHG 1716
>ref|XP_004958581.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
X2 [Setaria italica]
Length = 1725
Score = 61.2 bits (147), Expect = 3e-07
Identities = 34/56 (60%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = -1
Query: 726 LLQPQSHPSMISNGIRLGEPMSSAGILGKGPSEMRRYPNDRSTR-AHPGRFPPGQG 562
L QP P M++NG RL EP SSAGILG GP EMRRY N+R R HP FP G G
Sbjct: 1670 LYQP---PPMMTNGNRLQEPGSSAGILGWGPVEMRRYGNERPKRGVHPSHFPAGHG 1722
>ref|XP_004958580.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
X1 [Setaria italica]
Length = 1726
Score = 61.2 bits (147), Expect = 3e-07
Identities = 34/56 (60%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = -1
Query: 726 LLQPQSHPSMISNGIRLGEPMSSAGILGKGPSEMRRYPNDRSTR-AHPGRFPPGQG 562
L QP P M++NG RL EP SSAGILG GP EMRRY N+R R HP FP G G
Sbjct: 1671 LYQP---PPMMTNGNRLQEPGSSAGILGWGPVEMRRYGNERPKRGVHPSHFPAGHG 1723
>tpg|DAA41662.1| TPA: putative chromodomain helicase DNA binding protein [Zea mays]
Length = 1758
Score = 60.5 bits (145), Expect = 6e-07
Identities = 31/54 (57%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Frame = -1
Query: 720 QPQSHPSMISNGIRLGEPMSSAGILGKGPSEMRRYPNDRSTRA-HPGRFPPGQG 562
QP P +++NG RL E SSAGILG GP E+RRY N+R RA HP FP G G
Sbjct: 1702 QPLCQPPIMTNGNRLQESSSSAGILGWGPVEIRRYGNERPKRAVHPSHFPTGHG 1755
>tpg|DAA63992.1| TPA: putative chromodomain helicase DNA binding protein [Zea mays]
Length = 1525
Score = 60.1 bits (144), Expect = 7e-07
Identities = 31/54 (57%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Frame = -1
Query: 720 QPQSHPSMISNGIRLGEPMSSAGILGKGPSEMRRYPNDRSTR-AHPGRFPPGQG 562
QP P +++NG RL E SSAGILG GP EMRRY N+R R HP FP G G
Sbjct: 1469 QPLYQPPIMTNGNRLQESSSSAGILGWGPVEMRRYGNERPKRGVHPSHFPTGHG 1522
>dbj|BAC81164.1| chromodomain-helicase-DNA-binding protein-like protein [Oryza
sativa Japonica Group] gi|50510060|dbj|BAD30688.1|
chromodomain-helicase-DNA-binding protein-like protein
[Oryza sativa Japonica Group]
Length = 432
Score = 59.7 bits (143), Expect = 9e-07
Identities = 30/49 (61%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Frame = -1
Query: 705 PSMISNGIRLGEPMSSAGILGKGPSEMRRYPNDRSTR-AHPGRFPPGQG 562
P +++NG RL E SSAGILG P EMRRY N+R R HP RFPPG G
Sbjct: 381 PPIMTNGNRLQESSSSAGILGWAPVEMRRYGNERPKRGVHPSRFPPGHG 429
>gb|EEE67748.1| hypothetical protein OsJ_25446 [Oryza sativa Japonica Group]
Length = 1734
Score = 59.7 bits (143), Expect = 9e-07
Identities = 30/49 (61%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Frame = -1
Query: 705 PSMISNGIRLGEPMSSAGILGKGPSEMRRYPNDRSTR-AHPGRFPPGQG 562
P +++NG RL E SSAGILG P EMRRY N+R R HP RFPPG G
Sbjct: 1683 PPIMTNGNRLQESSSSAGILGWAPVEMRRYGNERPKRGVHPSRFPPGHG 1731
>gb|EEC82618.1| hypothetical protein OsI_27196 [Oryza sativa Indica Group]
Length = 1734
Score = 59.7 bits (143), Expect = 9e-07
Identities = 30/49 (61%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Frame = -1
Query: 705 PSMISNGIRLGEPMSSAGILGKGPSEMRRYPNDRSTR-AHPGRFPPGQG 562
P +++NG RL E SSAGILG P EMRRY N+R R HP RFPPG G
Sbjct: 1683 PPIMTNGNRLQESSSSAGILGWAPVEMRRYGNERPKRGVHPSRFPPGHG 1731
>dbj|BAJ95080.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1731
Score = 58.2 bits (139), Expect = 3e-06
Identities = 30/49 (61%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Frame = -1
Query: 705 PSMISNGIRLGEPMSSAGILGKGPSEMRRYPNDRSTR-AHPGRFPPGQG 562
P +++NG R E SSAGILG GP EMRRY NDR R HP RFP G G
Sbjct: 1680 PPIMANGNRSQESSSSAGILGWGPVEMRRYGNDRPKRGVHPSRFPAGHG 1728
>ref|XP_003562521.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
[Brachypodium distachyon]
Length = 1734
Score = 57.8 bits (138), Expect = 4e-06
Identities = 33/56 (58%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = -1
Query: 726 LLQPQSHPSMISNGIRLGEPMSSAGILGKGPSEMRRYPNDRSTR-AHPGRFPPGQG 562
L QP P +I+NG RL E SSAGILG GP E RRY NDR R HP FP G G
Sbjct: 1679 LYQP---PPIITNGNRLQESSSSAGILGWGPVEARRYGNDRPKRGVHPSHFPAGHG 1731
>ref|XP_002463329.1| hypothetical protein SORBIDRAFT_02g041910 [Sorghum bicolor]
gi|241926706|gb|EER99850.1| hypothetical protein
SORBIDRAFT_02g041910 [Sorghum bicolor]
Length = 1685
Score = 57.0 bits (136), Expect = 6e-06
Identities = 30/54 (55%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = -1
Query: 720 QPQSHPSMISNGIRLGEPMSSAGILGKGPSEMRRYPNDRSTR-AHPGRFPPGQG 562
QP P +++NG RL E SSAGILG GP EMRRY N+R R HP F G G
Sbjct: 1629 QPLYQPPVMTNGNRLQESSSSAGILGWGPVEMRRYGNERPKRGVHPSHFSTGHG 1682