BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00016966
         (399 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containi...    75   7e-12
ref|XP_002531339.1| pentatricopeptide repeat-containing protein,...    63   5e-08
ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containi...    63   5e-08
ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containi...    61   1e-07
ref|XP_006846078.1| hypothetical protein AMTR_s00012p00087690 [A...    59   9e-07
ref|XP_006429052.1| hypothetical protein CICLE_v10013605mg [Citr...    58   1e-06
gb|EMJ09267.1| hypothetical protein PRUPE_ppa001736mg [Prunus pe...    57   3e-06
gb|EXC31687.1| hypothetical protein L484_008777 [Morus notabilis]      56   6e-06
ref|XP_006341056.1| PREDICTED: pentatricopeptide repeat-containi...    56   6e-06

>ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
           gi|449525343|ref|XP_004169677.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 41/107 (38%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
 Frame = -3

Query: 313 MAFSALLVHPCVLPAKPI-FESPPLQHKSLPFASFAS--IRGFASLSTAFDSNPMRQLPP 143
           MAF+ +  +P  LP  P+ F S P+ + S+ F++  S  +   +S ++   S+ +  LPP
Sbjct: 1   MAFTCVKCYPWSLPHAPLSFSSKPISNSSIFFSASLSDQLASSSSSNSTSSSHIVHHLPP 60

Query: 142 NFTPKDLLSIIFRQRDAEASLELLNWALLQSHFRPTPSVFEEVLRQL 2
           +FTPK L+  + RQ D  A+L + NWA  Q +F P+ SV+EE+LR+L
Sbjct: 61  DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKL 107


>ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529061|gb|EEF31046.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 630

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 37/102 (36%), Positives = 52/102 (50%)
 Frame = -3

Query: 307 FSALLVHPCVLPAKPIFESPPLQHKSLPFASFASIRGFASLSTAFDSNPMRQLPPNFTPK 128
           F+ L  +P   P+          H+  PF+ F      ++LS A        L  NFTP 
Sbjct: 6   FTCLKCYPLFFPS----------HQHPPFSFFHKPISNSTLSFASTQQHTATLSSNFTPA 55

Query: 127 DLLSIIFRQRDAEASLELLNWALLQSHFRPTPSVFEEVLRQL 2
            LL  + RQ D  A+L LL+WA  Q +FRP  S++EE+LR+L
Sbjct: 56  QLLDTLRRQNDETAALRLLSWASKQPNFRPNSSIYEEILRKL 97


>ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
 Frame = -3

Query: 313 MAFSALLVHPCVLPAKPIFESPPL---QHKSLPFASFASIRGF-----ASLSTAFDS--- 167
           MAFS+ L      P   + + PP     H   PF+   S          ++S +F +   
Sbjct: 1   MAFSSCLKWYPWTPPHTLTQPPPTLSSAHNCKPFSKLISFTSTHHHDQQAVSPSFSTLSP 60

Query: 166 NPMRQLPPNFTPKDLLSIIFRQRDAEASLELLNWALLQSHFRPTPSVFEEVLRQL 2
           +P  QLP NFTPK L   + RQ D ++ L+LL+WA  Q +F P+  ++EEVLR+L
Sbjct: 61  SPTTQLPQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKL 115


>ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
 Frame = -3

Query: 313 MAFSALLVHPCVLPAKPIFESPPLQHKSLPFA-SFASIRGFASLSTAFDSNPMRQ--LPP 143
           MA S+L  HP      P+  +   Q  + PF+ S +S   F+S S    S       LPP
Sbjct: 1   MALSSLHFHPL-----PLAYTVITQRHTTPFSFSLSSTFRFSSSSALSSSTSATHHPLPP 55

Query: 142 NFTPKDLLSIIFRQRDAEASLELLNWALLQSHFRPTPSVFEEVLRQL 2
           +F+P  LL ++ RQ D+ ++L L  WA  Q ++   PSVF E+LRQL
Sbjct: 56  DFSPSQLLDLLRRQPDSSSALSLFQWASAQPNYSAHPSVFHELLRQL 102


>ref|XP_006846078.1| hypothetical protein AMTR_s00012p00087690 [Amborella trichopoda]
           gi|548848848|gb|ERN07753.1| hypothetical protein
           AMTR_s00012p00087690 [Amborella trichopoda]
          Length = 805

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
 Frame = -3

Query: 271 AKPIFESPPLQHKSLP---------FASFASIRGFASLSTAFDSNPMRQLPPNFTPKDLL 119
           A P+  +PP +  SL           +S +     +S   +   + + Q+PP+FT +DLL
Sbjct: 53  AHPLQSTPPQKFLSLTERPNFSQCLASSQSQGLSISSKPNSLSPSSIHQIPPDFTTEDLL 112

Query: 118 SIIFRQRDAEASLELLNWALLQSHFRPTPSVFEEVLRQL 2
           SI+ RQ+DAEA+L++ N+A     F   PS++E VL+ L
Sbjct: 113 SILNRQKDAEATLQIFNFASKHPSFITEPSIYEAVLKSL 151


>ref|XP_006429052.1| hypothetical protein CICLE_v10013605mg [Citrus clementina]
           gi|568854342|ref|XP_006480788.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Citrus sinensis]
           gi|557531109|gb|ESR42292.1| hypothetical protein
           CICLE_v10013605mg [Citrus clementina]
          Length = 768

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 42/106 (39%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
 Frame = -3

Query: 304 SALLVHPCVLPAKPIFESPPLQHKSLPFASFASIRG-----FASLSTAFDSNPMRQLPPN 140
           S L  HP  LP + +    PL  K     SFAS +        SLS++  S   RQLP N
Sbjct: 5   SCLKSHPWPLPRQSLL---PLSSKPTTI-SFASTQHHDHQQLTSLSSS-SSTFSRQLPSN 59

Query: 139 FTPKDLLSIIFRQRDAEASLELLNWALLQSHFRPTPSVFEEVLRQL 2
           FT   LL  + RQRD  ++L L  WA  Q +F P  S++EE+L +L
Sbjct: 60  FTSTQLLDALRRQRDESSALRLFTWASKQPNFAPNSSLYEELLTKL 105


>gb|EMJ09267.1| hypothetical protein PRUPE_ppa001736mg [Prunus persica]
          Length = 772

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
 Frame = -3

Query: 250 PPLQHKSLPFASFASIRGFASLSTAFD---SNPM--RQLPPNFTPKDLLSIIFRQRDAEA 86
           P   HK     SF  +     L T      S P+    LPP+FTP+ LL  + RQ D  +
Sbjct: 26  PSSSHKLFTSLSFPLLHHHDQLVTHSSLSYSTPVSTHHLPPDFTPQQLLDTLRRQNDESS 85

Query: 85  SLELLNWALLQSHFRPTPSVFEEVLRQL 2
           +L L +WA  Q +F P  +++EEVLR+L
Sbjct: 86  ALRLFDWASKQPNFTPNSTIYEEVLRKL 113


>gb|EXC31687.1| hypothetical protein L484_008777 [Morus notabilis]
          Length = 781

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
 Frame = -3

Query: 271 AKPIFESPPLQ--HKSLPFASFAS-IRGFASLSTAFDSNPMRQLPPNFTPKDLLSIIFRQ 101
           +KP    PPL   +K+   +SF+S I    S+ ++  ++P   LPP+FT   LL  + RQ
Sbjct: 23  SKPPSPFPPLSFPNKTNLSSSFSSPIHKNFSIQSSSSTSPTPLLPPDFTSNQLLDAVRRQ 82

Query: 100 RDAEASLELLNWALLQSHFRPTPSVFEEVLRQL 2
            D  ++L L  WA  Q +F P+P ++ E+L +L
Sbjct: 83  NDESSALRLFEWASNQPNFSPSPLLYNEILGKL 115


>ref|XP_006341056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Solanum tuberosum]
          Length = 766

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 39/109 (35%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
 Frame = -3

Query: 313 MAFSA---LLVHPCVLPAKPI--FESPPLQHKSLPFASFASIRGFASLSTAFDSNPMRQL 149
           MAFS    L  HP      P   F  PP  H   P +   S R     ST   S   ++L
Sbjct: 1   MAFSFSSFLKCHPWTQSQNPPNPFSFPPPFHPPKPISLPFSSRHERVSSTVLPSKA-KEL 59

Query: 148 PPNFTPKDLLSIIFRQRDAEASLELLNWALLQSHFRPTPSVFEEVLRQL 2
             +FTPK  L  + ++ D  ++  L  WA  Q HF PT S++EE+LR+L
Sbjct: 60  LQDFTPKQFLDTLRQENDETSAFHLFKWASKQPHFTPTLSIYEEILRKL 108