BLASTX nr result
ID: Zingiber23_contig00016751
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00016751
(852 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY34317.1| RNA-binding family protein, putative isoform 1 [T... 269 1e-69
ref|XP_004148449.1| PREDICTED: uncharacterized protein LOC101211... 266 5e-69
emb|CBI24384.3| unnamed protein product [Vitis vinifera] 259 7e-67
ref|XP_003632233.1| PREDICTED: uncharacterized protein LOC100258... 259 7e-67
gb|EMJ06300.1| hypothetical protein PRUPE_ppa004648mg [Prunus pe... 259 9e-67
ref|XP_006836153.1| hypothetical protein AMTR_s00101p00033020 [A... 258 3e-66
ref|XP_003617132.1| Heterogeneous nuclear ribonucleoprotein D0 [... 257 4e-66
ref|XP_006362738.1| PREDICTED: heterogeneous nuclear ribonucleop... 255 1e-65
ref|NP_001274776.1| heterogeneous nuclear ribonucleoprotein A2 h... 255 1e-65
gb|ESW13552.1| hypothetical protein PHAVU_008G206200g [Phaseolus... 254 3e-65
ref|XP_004228485.1| PREDICTED: uncharacterized protein LOC101255... 254 4e-65
gb|EXC19709.1| Uncharacterized RNA-binding protein [Morus notabi... 253 5e-65
ref|XP_004493289.1| PREDICTED: heterogeneous nuclear ribonucleop... 252 1e-64
ref|XP_006575610.1| PREDICTED: nuclear polyadenylated RNA-bindin... 252 1e-64
ref|XP_004289264.1| PREDICTED: uncharacterized protein LOC101308... 251 2e-64
ref|XP_003545465.1| PREDICTED: nuclear polyadenylated RNA-bindin... 251 2e-64
ref|XP_002322576.1| RNA recognition motif-containing family prot... 251 2e-64
ref|XP_002307930.1| RNA recognition motif-containing family prot... 251 2e-64
ref|XP_006481969.1| PREDICTED: protein gar2-like isoform X1 [Cit... 251 3e-64
ref|XP_006430420.1| hypothetical protein CICLE_v10011637mg [Citr... 249 7e-64
>gb|EOY34317.1| RNA-binding family protein, putative isoform 1 [Theobroma cacao]
gi|508787062|gb|EOY34318.1| RNA-binding family protein,
putative isoform 1 [Theobroma cacao]
gi|508787063|gb|EOY34319.1| RNA-binding family protein,
putative isoform 1 [Theobroma cacao]
gi|508787064|gb|EOY34320.1| RNA-binding family protein,
putative isoform 1 [Theobroma cacao]
Length = 500
Score = 269 bits (687), Expect = 1e-69
Identities = 145/243 (59%), Positives = 167/243 (68%), Gaps = 4/243 (1%)
Frame = +1
Query: 1 GKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLASIGXXXXXXXXX---SEYTQRK 171
GKSKGY FILFKHR+GARR+L++PQKKIGNRITSCQLAS G SEYTQRK
Sbjct: 198 GKSKGYAFILFKHRSGARRALKQPQKKIGNRITSCQLASQGPVPAPPPSAPPVSEYTQRK 257
Query: 172 IFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALEEP 351
IFVSNV AE+DP+KL+++F +YGEIEEGPLGLDK SGKPKGFALFVY+++ESA++ALEEP
Sbjct: 258 IFVSNVSAEVDPEKLLEYFRQYGEIEEGPLGLDKQSGKPKGFALFVYRSIESARRALEEP 317
Query: 352 HKNFEGHILHCQKAIDGPKPNKPGFHFQSPVAHHIGLHHVAGGIHGSHIPRNHNPSLFGG 531
HKNFEGH+LHCQKAIDGPKPNK G+ HH H G P H+
Sbjct: 318 HKNFEGHVLHCQKAIDGPKPNKGGYGGSGSGGHHQYQQHQQG--QHQMQPHYHHAK---- 371
Query: 532 VGSHLSSATSAGHLMAPSGAGHL-MAPSGAGVGFNPDXXXXXXXXXGLNPVLGQALTALL 708
G + + + GHLMAPSG + P A GFNP LNP LGQALTALL
Sbjct: 372 KGKYSTGGSDTGHLMAPSGPAAVGFNPGVAAAGFNP---GVAAAAPALNPALGQALTALL 428
Query: 709 ANQ 717
A Q
Sbjct: 429 ATQ 431
Score = 69.3 bits (168), Expect = 2e-09
Identities = 36/85 (42%), Positives = 47/85 (55%)
Frame = +1
Query: 166 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 345
RKIFV + + + L F KYGEIEE D+VSGK KG+A ++K A++AL+
Sbjct: 160 RKIFVHGLSWDTTAETLTAEFIKYGEIEECKAVTDRVSGKSKGYAFILFKHRSGARRALK 219
Query: 346 EPHKNFEGHILHCQKAIDGPKPNKP 420
+P K I CQ A GP P P
Sbjct: 220 QPQKKIGNRITSCQLASQGPVPAPP 244
>ref|XP_004148449.1| PREDICTED: uncharacterized protein LOC101211535 [Cucumis sativus]
gi|449503048|ref|XP_004161816.1| PREDICTED:
uncharacterized protein LOC101228786 [Cucumis sativus]
Length = 500
Score = 266 bits (681), Expect = 5e-69
Identities = 141/246 (57%), Positives = 168/246 (68%), Gaps = 7/246 (2%)
Frame = +1
Query: 1 GKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLASIGXXXXXXXXX-------SEY 159
GKSKGYGFILFK R+GAR++L+EPQKKIGNR+T+CQLAS+G SEY
Sbjct: 205 GKSKGYGFILFKKRSGARKALKEPQKKIGNRMTACQLASVGPVPTTNAVAAPQVPPASEY 264
Query: 160 TQRKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKA 339
TQRKI+VSNVGA++DPQKL+ FFS++GE++EGPLGLDK++GKPKGF LFVYK++ESAKKA
Sbjct: 265 TQRKIYVSNVGADVDPQKLLAFFSQFGEVDEGPLGLDKMTGKPKGFCLFVYKSIESAKKA 324
Query: 340 LEEPHKNFEGHILHCQKAIDGPKPNKPGFHFQSPVAHHIGLHHVAGGIHGSHIPRNHNPS 519
LEEPHKNFEGH+LHCQKAIDGPKP K +P + RN NP+
Sbjct: 325 LEEPHKNFEGHVLHCQKAIDGPKPGKAQHQHHTP---------------NAPFQRNKNPN 369
Query: 520 LFGGVGSHLSSATSAGHLMAPSGAGHLMAPSGAGVGFNPDXXXXXXXXXGLNPVLGQALT 699
GG A SG+GHLMAP+G GVG+N GLNP +GQALT
Sbjct: 370 YTGG---------------AASGSGHLMAPAGPGVGYN------QGPPQGLNPAIGQALT 408
Query: 700 ALLANQ 717
ALLA Q
Sbjct: 409 ALLAGQ 414
Score = 69.7 bits (169), Expect = 1e-09
Identities = 34/84 (40%), Positives = 49/84 (58%)
Frame = +1
Query: 160 TQRKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKA 339
+ RKIFV +G + + + L+ F ++GEIE+ DKVSGK KG+ ++K A+KA
Sbjct: 165 SHRKIFVHGLGWDTNAETLINVFKQFGEIEDCKAVCDKVSGKSKGYGFILFKKRSGARKA 224
Query: 340 LEEPHKNFEGHILHCQKAIDGPKP 411
L+EP K + CQ A GP P
Sbjct: 225 LKEPQKKIGNRMTACQLASVGPVP 248
>emb|CBI24384.3| unnamed protein product [Vitis vinifera]
Length = 467
Score = 259 bits (663), Expect = 7e-67
Identities = 145/242 (59%), Positives = 168/242 (69%), Gaps = 3/242 (1%)
Frame = +1
Query: 1 GKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLASIGXXXXXXXXX---SEYTQRK 171
GKSKGY FILFKHR+GAR++L++PQKKIGNR+TSCQLAS G SEYTQRK
Sbjct: 210 GKSKGYAFILFKHRSGARKALKQPQKKIGNRMTSCQLASAGPVPAPPPVVPPVSEYTQRK 269
Query: 172 IFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALEEP 351
IFVSNV +E+DPQKL++FF+K+GEIEEGPLGLDK +GKPKGFALFVYK++ES+++ALEEP
Sbjct: 270 IFVSNVSSEIDPQKLLEFFAKFGEIEEGPLGLDKSTGKPKGFALFVYKSIESSRRALEEP 329
Query: 352 HKNFEGHILHCQKAIDGPKPNKPGFHFQSPVAHHIGLHHVAGGIHGSHIPRNHNPSLFGG 531
HK FEGH LHCQKAIDGPKPNKP FH HH HH H H P + S +
Sbjct: 330 HKIFEGHTLHCQKAIDGPKPNKP-FH------HH---HHQ----HQPHYPSRKDKSKY-- 373
Query: 532 VGSHLSSATSAGHLMAPSGAGHLMAPSGAGVGFNPDXXXXXXXXXGLNPVLGQALTALLA 711
SA +A G GHLMAPSG + NP LNP LGQALTALLA
Sbjct: 374 ------SANAA-------GPGHLMAPSGPSMTLNP------GVAPALNPALGQALTALLA 414
Query: 712 NQ 717
+Q
Sbjct: 415 SQ 416
Score = 72.0 bits (175), Expect = 3e-10
Identities = 36/85 (42%), Positives = 48/85 (56%)
Frame = +1
Query: 166 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 345
RKIFV +G + + L F KYGEIE+ DK+SGK KG+A ++K A+KAL+
Sbjct: 172 RKIFVHGLGWDTTAETLTSVFGKYGEIEDCKAVSDKISGKSKGYAFILFKHRSGARKALK 231
Query: 346 EPHKNFEGHILHCQKAIDGPKPNKP 420
+P K + CQ A GP P P
Sbjct: 232 QPQKKIGNRMTSCQLASAGPVPAPP 256
>ref|XP_003632233.1| PREDICTED: uncharacterized protein LOC100258161 isoform 1 [Vitis
vinifera] gi|359479207|ref|XP_003632234.1| PREDICTED:
uncharacterized protein LOC100258161 isoform 2 [Vitis
vinifera] gi|147853236|emb|CAN80681.1| hypothetical
protein VITISV_037734 [Vitis vinifera]
Length = 478
Score = 259 bits (663), Expect = 7e-67
Identities = 145/242 (59%), Positives = 168/242 (69%), Gaps = 3/242 (1%)
Frame = +1
Query: 1 GKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLASIGXXXXXXXXX---SEYTQRK 171
GKSKGY FILFKHR+GAR++L++PQKKIGNR+TSCQLAS G SEYTQRK
Sbjct: 195 GKSKGYAFILFKHRSGARKALKQPQKKIGNRMTSCQLASAGPVPAPPPVVPPVSEYTQRK 254
Query: 172 IFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALEEP 351
IFVSNV +E+DPQKL++FF+K+GEIEEGPLGLDK +GKPKGFALFVYK++ES+++ALEEP
Sbjct: 255 IFVSNVSSEIDPQKLLEFFAKFGEIEEGPLGLDKSTGKPKGFALFVYKSIESSRRALEEP 314
Query: 352 HKNFEGHILHCQKAIDGPKPNKPGFHFQSPVAHHIGLHHVAGGIHGSHIPRNHNPSLFGG 531
HK FEGH LHCQKAIDGPKPNKP FH HH HH H H P + S +
Sbjct: 315 HKIFEGHTLHCQKAIDGPKPNKP-FH------HH---HHQ----HQPHYPSRKDKSKY-- 358
Query: 532 VGSHLSSATSAGHLMAPSGAGHLMAPSGAGVGFNPDXXXXXXXXXGLNPVLGQALTALLA 711
SA +A G GHLMAPSG + NP LNP LGQALTALLA
Sbjct: 359 ------SANAA-------GPGHLMAPSGPSMTLNP------GVAPALNPALGQALTALLA 399
Query: 712 NQ 717
+Q
Sbjct: 400 SQ 401
Score = 72.0 bits (175), Expect = 3e-10
Identities = 36/85 (42%), Positives = 48/85 (56%)
Frame = +1
Query: 166 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 345
RKIFV +G + + L F KYGEIE+ DK+SGK KG+A ++K A+KAL+
Sbjct: 157 RKIFVHGLGWDTTAETLTSVFGKYGEIEDCKAVSDKISGKSKGYAFILFKHRSGARKALK 216
Query: 346 EPHKNFEGHILHCQKAIDGPKPNKP 420
+P K + CQ A GP P P
Sbjct: 217 QPQKKIGNRMTSCQLASAGPVPAPP 241
>gb|EMJ06300.1| hypothetical protein PRUPE_ppa004648mg [Prunus persica]
Length = 498
Score = 259 bits (662), Expect = 9e-67
Identities = 143/253 (56%), Positives = 167/253 (66%), Gaps = 14/253 (5%)
Frame = +1
Query: 1 GKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLASIGXXXXXXXXX---------- 150
GKSKGYGFILFK R+GAR++L++PQKKIGNR+T+CQLA+IG
Sbjct: 190 GKSKGYGFILFKTRSGARKALKQPQKKIGNRMTACQLAAIGPGPAPSTAAAVPVAVQAAQ 249
Query: 151 ----SEYTQRKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKT 318
SEYTQRKI+VSNVGA+L+PQKL+ FFS++GEIEEGPLGLDK++G+PKGF LFVYK+
Sbjct: 250 SQTVSEYTQRKIYVSNVGADLEPQKLLMFFSRFGEIEEGPLGLDKMTGRPKGFCLFVYKS 309
Query: 319 VESAKKALEEPHKNFEGHILHCQKAIDGPKPNKPGFHFQSPVAHHIGLHHVAGGIHGSHI 498
ESAK+ALEEPHKNF+GHILHCQKAIDGPKP K Q P H HH + H S
Sbjct: 310 PESAKRALEEPHKNFDGHILHCQKAIDGPKPVKS----QHPNQH----HHKS---HNSKF 358
Query: 499 PRNHNPSLFGGVGSHLSSATSAGHLMAPSGAGHLMAPSGAGVGFNPDXXXXXXXXXGLNP 678
RN NP GG A +G GHLMAP+ G+GFN LNP
Sbjct: 359 QRNENPGYVGG---------------AAAGMGHLMAPASGGIGFN----QGAAAAQALNP 399
Query: 679 VLGQALTALLANQ 717
LGQALTAL A Q
Sbjct: 400 ALGQALTALFATQ 412
Score = 71.2 bits (173), Expect = 4e-10
Identities = 35/82 (42%), Positives = 48/82 (58%)
Frame = +1
Query: 166 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 345
RKIFV +G + + + L F +YGEIE+ DKVSGK KG+ ++KT A+KAL+
Sbjct: 152 RKIFVHGLGWDTNAETLTSVFKEYGEIEDCKAVCDKVSGKSKGYGFILFKTRSGARKALK 211
Query: 346 EPHKNFEGHILHCQKAIDGPKP 411
+P K + CQ A GP P
Sbjct: 212 QPQKKIGNRMTACQLAAIGPGP 233
>ref|XP_006836153.1| hypothetical protein AMTR_s00101p00033020 [Amborella trichopoda]
gi|548838653|gb|ERM99006.1| hypothetical protein
AMTR_s00101p00033020 [Amborella trichopoda]
Length = 481
Score = 258 bits (658), Expect = 3e-66
Identities = 141/241 (58%), Positives = 168/241 (69%), Gaps = 2/241 (0%)
Frame = +1
Query: 1 GKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLASIGXXXXXXXXXSEYTQRKIFV 180
GKSKGYGFILFKHR+GAR++L++PQK+IGNR+T+CQLAS G SEYT RKI+V
Sbjct: 152 GKSKGYGFILFKHRSGARKALKQPQKRIGNRMTACQLASAGPVPQQPPV-SEYTMRKIYV 210
Query: 181 SNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALEEPHKN 360
SNV +++DPQ+L FFSKYGEIEEGPLGLDK +GKP+GF+LFVYK++ESA+KALE+PHKN
Sbjct: 211 SNVSSDIDPQRLYTFFSKYGEIEEGPLGLDKQTGKPRGFSLFVYKSLESARKALEDPHKN 270
Query: 361 FEGHILHCQKAIDGPKPNKPGFHFQSPVAHHIGLHHVAGGIHGSHIPRNH--NPSLFGGV 534
FEGHILHCQKAIDGPKPNKP H + AHH H H H P++H N + V
Sbjct: 271 FEGHILHCQKAIDGPKPNKPTHH--AGQAHHHPHHQ--NQHHNPHYPQHHADNMQMMNQV 326
Query: 535 GSHLSSATSAGHLMAPSGAGHLMAPSGAGVGFNPDXXXXXXXXXGLNPVLGQALTALLAN 714
+H A H G LMAPS + FN GLNP LGQAL ALLA+
Sbjct: 327 PAH-----GASH-------GGLMAPSQGSMPFN-------QAAGGLNPALGQALNALLAS 367
Query: 715 Q 717
Q
Sbjct: 368 Q 368
Score = 69.3 bits (168), Expect = 2e-09
Identities = 35/85 (41%), Positives = 48/85 (56%)
Frame = +1
Query: 166 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 345
RKIFV +G + + L+ F KYGEIE+ DK SGK KG+ ++K A+KAL+
Sbjct: 114 RKIFVHGLGWDTTAEILISTFKKYGEIEDCNAVADKHSGKSKGYGFILFKHRSGARKALK 173
Query: 346 EPHKNFEGHILHCQKAIDGPKPNKP 420
+P K + CQ A GP P +P
Sbjct: 174 QPQKRIGNRMTACQLASAGPVPQQP 198
>ref|XP_003617132.1| Heterogeneous nuclear ribonucleoprotein D0 [Medicago truncatula]
gi|355518467|gb|AET00091.1| Heterogeneous nuclear
ribonucleoprotein D0 [Medicago truncatula]
Length = 523
Score = 257 bits (656), Expect = 4e-66
Identities = 148/277 (53%), Positives = 171/277 (61%), Gaps = 8/277 (2%)
Frame = +1
Query: 1 GKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLASIGXXXXXXXXX---SEYTQRK 171
GKSKGY FILFKHR G RR+L++PQK IGNR TSCQLAS G SEYTQRK
Sbjct: 203 GKSKGYAFILFKHRTGCRRALKQPQKVIGNRTTSCQLASAGPVPAPPPNAPPVSEYTQRK 262
Query: 172 IFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALEEP 351
IFVSNV +++DPQKL++FF ++GE+++GPLGLDK +GKPKGFALFVYKTVESAKKALEEP
Sbjct: 263 IFVSNVSSDIDPQKLLEFFKQFGEVDDGPLGLDKATGKPKGFALFVYKTVESAKKALEEP 322
Query: 352 HKNFEGHILHCQKAIDGPKPNKPGFHFQSPVAH--HIGLHHVAGGIHGSHIPRNHNPSLF 525
+K FEGH L+CQKA+DGPK G H+Q H H HH GG G + PR
Sbjct: 323 NKVFEGHTLYCQKAVDGPKGYNKGGHYQQQHHHQPHHSHHHHHGGGGGHYNPRKEKKYSH 382
Query: 526 GGVGSHLSSATSAGHLMAPSGAGHLMAPSG-AGVGFNPDXXXXXXXXXGLNPVLGQALTA 702
GG G PS GHLMAP+G A G+N GLNP LGQAL+A
Sbjct: 383 GGGG--------------PSHGGHLMAPTGPAAGGYN-----AGVPPQGLNPALGQALSA 423
Query: 703 LLANQXXXXXXXXXXXXXXXXXV--AGTPGALSNSSA 807
LLANQ V AG P A N +A
Sbjct: 424 LLANQGAGLGLGNLLGGLGGAPVNQAGPPAAYGNQAA 460
Score = 67.0 bits (162), Expect = 8e-09
Identities = 35/85 (41%), Positives = 46/85 (54%)
Frame = +1
Query: 166 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 345
RKIFV +G + + L FSKYGEIE+ DK SGK KG+A ++K ++AL+
Sbjct: 165 RKIFVHGLGWDATAETLTTTFSKYGEIEDCKAVTDKASGKSKGYAFILFKHRTGCRRALK 224
Query: 346 EPHKNFEGHILHCQKAIDGPKPNKP 420
+P K CQ A GP P P
Sbjct: 225 QPQKVIGNRTTSCQLASAGPVPAPP 249
>ref|XP_006362738.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2 homolog
1-like isoform X1 [Solanum tuberosum]
gi|565394180|ref|XP_006362739.1| PREDICTED:
heterogeneous nuclear ribonucleoprotein A2 homolog
1-like isoform X2 [Solanum tuberosum]
gi|565394183|ref|XP_006362740.1| PREDICTED:
heterogeneous nuclear ribonucleoprotein A2 homolog
1-like isoform X3 [Solanum tuberosum]
Length = 490
Score = 255 bits (652), Expect = 1e-65
Identities = 143/245 (58%), Positives = 163/245 (66%), Gaps = 6/245 (2%)
Frame = +1
Query: 1 GKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLASIGXXXXXXXXX-----SEYTQ 165
GKSKGYGFILFKHR+GAR++L+EPQKKIG R+TSCQLAS G SEYTQ
Sbjct: 197 GKSKGYGFILFKHRSGARKALKEPQKKIGTRMTSCQLASAGPVPAPPPTTATPPVSEYTQ 256
Query: 166 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 345
RKIFVSNV A+L+PQKL+++FSK+GE+EEGPLGLDK SGKPKGF LFVYKTVE A+KALE
Sbjct: 257 RKIFVSNVAADLEPQKLLEYFSKFGEVEEGPLGLDKQSGKPKGFCLFVYKTVEGARKALE 316
Query: 346 EPHKNFEGHILHCQKAIDGPKPNKPGFHFQSPVA-HHIGLHHVAGGIHGSHIPRNHNPSL 522
EPHK FEGH LHCQKAIDGPK +K Q P + H HH H +P+
Sbjct: 317 EPHKTFEGHTLHCQKAIDGPKHSKNFHQQQQPQSQQHYPQHH----HHNQQQHYYQHPAK 372
Query: 523 FGGVGSHLSSATSAGHLMAPSGAGHLMAPSGAGVGFNPDXXXXXXXXXGLNPVLGQALTA 702
G + A SAGHLMAPSG A VG+NP + P LGQALTA
Sbjct: 373 KGKYSGSSAGAGSAGHLMAPSGP--------APVGYNP-------AVAAVTPALGQALTA 417
Query: 703 LLANQ 717
LLA Q
Sbjct: 418 LLATQ 422
Score = 71.2 bits (173), Expect = 4e-10
Identities = 38/96 (39%), Positives = 51/96 (53%)
Frame = +1
Query: 166 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 345
RKIFV +G + + L F+ YGEIE+ DKVSGK KG+ ++K A+KAL+
Sbjct: 159 RKIFVHGLGWDTTAETLTSVFATYGEIEDCKAVTDKVSGKSKGYGFILFKHRSGARKALK 218
Query: 346 EPHKNFEGHILHCQKAIDGPKPNKPGFHFQSPVAHH 453
EP K + CQ A GP P P PV+ +
Sbjct: 219 EPQKKIGTRMTSCQLASAGPVPAPPPTTATPPVSEY 254
>ref|NP_001274776.1| heterogeneous nuclear ribonucleoprotein A2 homolog 1-like [Solanum
tuberosum] gi|82621124|gb|ABB86250.1| RNA-binding
protein AKIP1-like [Solanum tuberosum]
Length = 498
Score = 255 bits (652), Expect = 1e-65
Identities = 143/245 (58%), Positives = 163/245 (66%), Gaps = 6/245 (2%)
Frame = +1
Query: 1 GKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLASIGXXXXXXXXX-----SEYTQ 165
GKSKGYGFILFKHR+GAR++L+EPQKKIG R+TSCQLAS G SEYTQ
Sbjct: 197 GKSKGYGFILFKHRSGARKALKEPQKKIGTRMTSCQLASAGPVPAPPPTTATPPVSEYTQ 256
Query: 166 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 345
RKIFVSNV A+L+PQKL+++FSK+GE+EEGPLGLDK SGKPKGF LFVYKTVE A+KALE
Sbjct: 257 RKIFVSNVAADLEPQKLLEYFSKFGEVEEGPLGLDKQSGKPKGFCLFVYKTVEGARKALE 316
Query: 346 EPHKNFEGHILHCQKAIDGPKPNKPGFHFQSPVA-HHIGLHHVAGGIHGSHIPRNHNPSL 522
EPHK FEGH LHCQKAIDGPK +K Q P + H HH H +P+
Sbjct: 317 EPHKTFEGHTLHCQKAIDGPKHSKNFHQQQQPQSQQHYPQHH----HHNQQQHYYQHPAK 372
Query: 523 FGGVGSHLSSATSAGHLMAPSGAGHLMAPSGAGVGFNPDXXXXXXXXXGLNPVLGQALTA 702
G + A SAGHLMAPSG A VG+NP + P LGQALTA
Sbjct: 373 KGKYSGSSAGAGSAGHLMAPSGP--------APVGYNP-------AVAAVTPALGQALTA 417
Query: 703 LLANQ 717
LLA Q
Sbjct: 418 LLATQ 422
Score = 71.2 bits (173), Expect = 4e-10
Identities = 38/96 (39%), Positives = 51/96 (53%)
Frame = +1
Query: 166 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 345
RKIFV +G + + L F+ YGEIE+ DKVSGK KG+ ++K A+KAL+
Sbjct: 159 RKIFVHGLGWDTTAETLTSVFATYGEIEDCKAVTDKVSGKSKGYGFILFKHRSGARKALK 218
Query: 346 EPHKNFEGHILHCQKAIDGPKPNKPGFHFQSPVAHH 453
EP K + CQ A GP P P PV+ +
Sbjct: 219 EPQKKIGTRMTSCQLASAGPVPAPPPTTATPPVSEY 254
>gb|ESW13552.1| hypothetical protein PHAVU_008G206200g [Phaseolus vulgaris]
Length = 494
Score = 254 bits (649), Expect = 3e-65
Identities = 144/246 (58%), Positives = 164/246 (66%), Gaps = 7/246 (2%)
Frame = +1
Query: 1 GKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLASIGXXXXXXXXX---SEYTQRK 171
GKSKGY FILFKH+ AR++L+ PQKKIGNR TSCQLAS G SEYTQRK
Sbjct: 204 GKSKGYAFILFKHKDDARKALKNPQKKIGNRTTSCQLASAGPVPAPPPNANPVSEYTQRK 263
Query: 172 IFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALEEP 351
IFVSNV AE+DPQKL++FF ++GE+E+GPLGLDK +GKPKGFALFVYK+VES+KKALEEP
Sbjct: 264 IFVSNVSAEIDPQKLLEFFKQFGEVEDGPLGLDKNTGKPKGFALFVYKSVESSKKALEEP 323
Query: 352 HKNFEGHILHCQKAIDGPKPNKPGFH--FQSPVAHHIGLHHVAGGIHGSHIPRNHNPSLF 525
HKNFEGH L+CQKA+DGPK NK G+H +HH HH H H R
Sbjct: 324 HKNFEGHTLYCQKAVDGPKGNK-GYHQYHHQQHSHHHHHHH-----HQPHYQRKEKNKYS 377
Query: 526 GGVGSHLSSATSAGHLMAPS-GAGHLMAPSGAGV-GFNPDXXXXXXXXXGLNPVLGQALT 699
G G PS G+GHLMAPS + V GFNP GLNP LGQALT
Sbjct: 378 SGGG-------------GPSHGSGHLMAPSASAVGGFNP-----GVPAQGLNPALGQALT 419
Query: 700 ALLANQ 717
ALL NQ
Sbjct: 420 ALLTNQ 425
Score = 72.4 bits (176), Expect = 2e-10
Identities = 37/85 (43%), Positives = 47/85 (55%)
Frame = +1
Query: 166 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 345
RKIFV +G + + L F KYGEIE+ DKVSGK KG+A ++K + A+KAL+
Sbjct: 166 RKIFVHGLGWDATAETLTSVFGKYGEIEDCKAVTDKVSGKSKGYAFILFKHKDDARKALK 225
Query: 346 EPHKNFEGHILHCQKAIDGPKPNKP 420
P K CQ A GP P P
Sbjct: 226 NPQKKIGNRTTSCQLASAGPVPAPP 250
>ref|XP_004228485.1| PREDICTED: uncharacterized protein LOC101255522 isoform 1 [Solanum
lycopersicum] gi|460365189|ref|XP_004228486.1|
PREDICTED: uncharacterized protein LOC101255522 isoform
2 [Solanum lycopersicum]
Length = 488
Score = 254 bits (648), Expect = 4e-65
Identities = 145/245 (59%), Positives = 164/245 (66%), Gaps = 6/245 (2%)
Frame = +1
Query: 1 GKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLASIGXXXXXXXXX-----SEYTQ 165
GKSKGYGFILFKHR+GAR++L+EPQKKIG R+TSCQLAS G SEYTQ
Sbjct: 194 GKSKGYGFILFKHRSGARKALKEPQKKIGTRMTSCQLASAGPVPAPPPSTAAAPVSEYTQ 253
Query: 166 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 345
RKIFVSNV A+L+PQKL+++FSK+GE+EEGPLGLDK SGKPKGF LFVYKTVE A+KALE
Sbjct: 254 RKIFVSNVAADLEPQKLLEYFSKFGEVEEGPLGLDKQSGKPKGFCLFVYKTVEGARKALE 313
Query: 346 EPHKNFEGHILHCQKAIDGPKPNKPGFHFQSPVA-HHIGLHHVAGGIHGSHIPRNHNPSL 522
EPHK FEGH LHCQKAIDGPK +K Q P + H HH H +P+
Sbjct: 314 EPHKTFEGHTLHCQKAIDGPKHSKNFHQQQQPQSQQHYPQHH---HHHNQQQHYYQHPAK 370
Query: 523 FGGVGSHLSSATSAGHLMAPSGAGHLMAPSGAGVGFNPDXXXXXXXXXGLNPVLGQALTA 702
G SSA SAGHLMAPSG A VG+NP + P LGQALTA
Sbjct: 371 KGKYSG--SSAGSAGHLMAPSGP--------APVGYNP-------AVAAVTPALGQALTA 413
Query: 703 LLANQ 717
LLA Q
Sbjct: 414 LLATQ 418
Score = 72.0 bits (175), Expect = 3e-10
Identities = 38/96 (39%), Positives = 51/96 (53%)
Frame = +1
Query: 166 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 345
RKIFV +G + + L F YGEIE+ DKVSGK KG+ ++K A+KAL+
Sbjct: 156 RKIFVHGLGWDTTAETLTSVFGSYGEIEDCKAVADKVSGKSKGYGFILFKHRSGARKALK 215
Query: 346 EPHKNFEGHILHCQKAIDGPKPNKPGFHFQSPVAHH 453
EP K + CQ A GP P P +PV+ +
Sbjct: 216 EPQKKIGTRMTSCQLASAGPVPAPPPSTAAAPVSEY 251
>gb|EXC19709.1| Uncharacterized RNA-binding protein [Morus notabilis]
Length = 483
Score = 253 bits (647), Expect = 5e-65
Identities = 145/244 (59%), Positives = 162/244 (66%), Gaps = 5/244 (2%)
Frame = +1
Query: 1 GKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLASIGXXXXXXXXX-----SEYTQ 165
GKSKGYGFILFK R+GAR++L+EPQKKIGNR+TS QLAS+G SEYTQ
Sbjct: 194 GKSKGYGFILFKTRSGARKALKEPQKKIGNRMTSSQLASVGVVPAAASAQPQGPSSEYTQ 253
Query: 166 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 345
RKI+VSNVGAELDPQKL FFSKYGEIEEGPLGLDK +G+PKGF LFVYKTV+ A+KAL
Sbjct: 254 RKIYVSNVGAELDPQKLTVFFSKYGEIEEGPLGLDKATGRPKGFCLFVYKTVDGARKALA 313
Query: 346 EPHKNFEGHILHCQKAIDGPKPNKPGFHFQSPVAHHIGLHHVAGGIHGSHIPRNHNPSLF 525
EPHKNFEG+ILHCQKAIDGPKP K +HH HH H RN NP F
Sbjct: 314 EPHKNFEGNILHCQKAIDGPKPGK---------SHHNQHHH--------HNQRNKNPG-F 355
Query: 526 GGVGSHLSSATSAGHLMAPSGAGHLMAPSGAGVGFNPDXXXXXXXXXGLNPVLGQALTAL 705
GG P+ GHLMAP+G G GF LNP LGQA+TAL
Sbjct: 356 GGAQP------------GPAVPGHLMAPAGPG-GFT----QGAAAAQALNPALGQAITAL 398
Query: 706 LANQ 717
LA+Q
Sbjct: 399 LASQ 402
Score = 63.9 bits (154), Expect = 7e-08
Identities = 35/96 (36%), Positives = 49/96 (51%)
Frame = +1
Query: 166 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 345
RKIFV +G + + L F +YG+IE+ DKVSGK KG+ ++KT A+KAL+
Sbjct: 156 RKIFVYGLGWDTTAETLTSVFKEYGDIEDCKAVCDKVSGKSKGYGFILFKTRSGARKALK 215
Query: 346 EPHKNFEGHILHCQKAIDGPKPNKPGFHFQSPVAHH 453
EP K + Q A G P Q P + +
Sbjct: 216 EPQKKIGNRMTSSQLASVGVVPAAASAQPQGPSSEY 251
>ref|XP_004493289.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Cicer
arietinum]
Length = 490
Score = 252 bits (644), Expect = 1e-64
Identities = 140/255 (54%), Positives = 165/255 (64%), Gaps = 16/255 (6%)
Frame = +1
Query: 1 GKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLASIGXXXXXXXXX-------SEY 159
GKSKGYGFILFK R+GAR +L+EPQKKIGNR+T+CQLASIG SEY
Sbjct: 166 GKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGPVQNSLQPTPQVTPQTSEY 225
Query: 160 TQRKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKA 339
TQ+KI++SNVG +LDPQKL FFS++GEIEEGPLGLDK +GKPKGF LFVYK+ ESA++A
Sbjct: 226 TQKKIYISNVGPDLDPQKLFTFFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRA 285
Query: 340 LEEPHKNFEGHILHCQKAIDGPKPNKPGFHFQSPVAHHIG----LHHVAGGIHGSHIPRN 507
LEEPHK FEGHILHCQKAIDGPK K H Q H+ L+H+ + RN
Sbjct: 286 LEEPHKEFEGHILHCQKAIDGPKVVKT--HHQQQQQQHVNSLNPLNHLNQLTQRTQYQRN 343
Query: 508 HNPSLFGGVGSHLSSATSAGHLMAPSGAGHLM-----APSGAGVGFNPDXXXXXXXXXGL 672
N G G + + GHLMAP+G G + A + A G NP L
Sbjct: 344 DNAGFVVGGGGSSVAVSQQGHLMAPAGQGQAVGYNQAATAAAAQGLNP----------AL 393
Query: 673 NPVLGQALTALLANQ 717
P LGQALTALLA+Q
Sbjct: 394 TPALGQALTALLASQ 408
Score = 67.4 bits (163), Expect = 6e-09
Identities = 35/83 (42%), Positives = 46/83 (55%)
Frame = +1
Query: 166 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 345
RKIFV +G + L+ FS+YGEIE+ DKVSGK KG+ ++K A+ AL+
Sbjct: 128 RKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKKRSGARNALK 187
Query: 346 EPHKNFEGHILHCQKAIDGPKPN 414
EP K + CQ A GP N
Sbjct: 188 EPQKKIGNRMTACQLASIGPVQN 210
>ref|XP_006575610.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like
isoform X1 [Glycine max]
gi|571442021|ref|XP_006575611.1| PREDICTED: nuclear
polyadenylated RNA-binding protein 4-like isoform X2
[Glycine max]
Length = 496
Score = 252 bits (643), Expect = 1e-64
Identities = 142/241 (58%), Positives = 163/241 (67%), Gaps = 5/241 (2%)
Frame = +1
Query: 1 GKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLASIGXXXXXXXXX---SEYTQRK 171
GKSKGY FILFKHR AR++L+ PQKKIGNR TSCQLAS G SEYTQRK
Sbjct: 209 GKSKGYAFILFKHRDDARKALKHPQKKIGNRTTSCQLASAGPVPAPPPSVTPVSEYTQRK 268
Query: 172 IFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALEEP 351
IFVSNV AE+DPQKL++FF ++GE+E+GPLGLDK +GKPKGFALFVYK+VESAKKALEEP
Sbjct: 269 IFVSNVSAEIDPQKLLEFFKQFGEVEDGPLGLDKNTGKPKGFALFVYKSVESAKKALEEP 328
Query: 352 HKNFEGHILHCQKAIDGPKPNKPGFHFQSPVAHHIGLHHVAGGIHGSHIPRNHNPSLFGG 531
+KN+EGH L+CQKA+DGPK +K G+H Q H HH H H R G
Sbjct: 329 NKNYEGHTLYCQKAVDGPKGSK-GYHHQQHSHSHHHHHH-----HQPHYQRKEKNKYSSG 382
Query: 532 VGSHLSSATSAGHLMAPS-GAGHLMAPSGAGV-GFNPDXXXXXXXXXGLNPVLGQALTAL 705
G PS G+GHLMAPSG+ V GFNP GLNPVLGQALTAL
Sbjct: 383 GG-------------GPSHGSGHLMAPSGSAVGGFNP-----GVPAQGLNPVLGQALTAL 424
Query: 706 L 708
+
Sbjct: 425 I 425
Score = 72.0 bits (175), Expect = 3e-10
Identities = 37/85 (43%), Positives = 47/85 (55%)
Frame = +1
Query: 166 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 345
RKIFV +G + + L F KYGEIE+ DKVSGK KG+A ++K + A+KAL+
Sbjct: 171 RKIFVHGLGWDATAETLTSVFGKYGEIEDCKAVTDKVSGKSKGYAFILFKHRDDARKALK 230
Query: 346 EPHKNFEGHILHCQKAIDGPKPNKP 420
P K CQ A GP P P
Sbjct: 231 HPQKKIGNRTTSCQLASAGPVPAPP 255
>ref|XP_004289264.1| PREDICTED: uncharacterized protein LOC101308619 [Fragaria vesca
subsp. vesca]
Length = 481
Score = 251 bits (642), Expect = 2e-64
Identities = 145/251 (57%), Positives = 166/251 (66%), Gaps = 12/251 (4%)
Frame = +1
Query: 1 GKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLASIGXXXXXXXXX---------- 150
GKSKGYGFILFK R+GARR+L++PQKKIGNR+T+CQLAS+G
Sbjct: 186 GKSKGYGFILFKTRSGARRALKQPQKKIGNRMTACQLASLGPAATPTGPGPAAVAAQSQP 245
Query: 151 -SEYTQRKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVES 327
SEYTQRKI+VSNVGA+LDPQKL+ FFS++GEIEEGPLGLDK +G+PKGF LFVYK+ ES
Sbjct: 246 VSEYTQRKIYVSNVGADLDPQKLLVFFSRFGEIEEGPLGLDKATGRPKGFCLFVYKSPES 305
Query: 328 AKKALEEPHKNFEGHILHCQKAIDGPKPNKPGFHFQSPVAHHIGLHHVAGGIHGSHIPRN 507
AK+ALEEPHKNF+GHILHCQKAIDGPKP K +HH HH H RN
Sbjct: 306 AKRALEEPHKNFDGHILHCQKAIDGPKPVK---------SHHGNQHH-----HN----RN 347
Query: 508 HNPSLFGGVGSHLSSATSAGHLMAPSGAGHLMAPSG-AGVGFNPDXXXXXXXXXGLNPVL 684
N FGG AP+G GH+MAP G AG+GFN LNP L
Sbjct: 348 KNSGGFGG--------------GAPAGPGHMMAPGGAAGIGFN----QGAASTQALNPAL 389
Query: 685 GQALTALLANQ 717
GQAL ALLA Q
Sbjct: 390 GQAL-ALLATQ 399
Score = 68.6 bits (166), Expect = 3e-09
Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Frame = +1
Query: 166 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 345
RKIFV +G + + L F++YGEIE+ DKVSGK KG+ ++KT A++AL+
Sbjct: 148 RKIFVHGLGWDTTAETLTSVFTEYGEIEDCKAVCDKVSGKSKGYGFILFKTRSGARRALK 207
Query: 346 EPHKNFEGHILHCQKAIDGP--KPNKPG 423
+P K + CQ A GP P PG
Sbjct: 208 QPQKKIGNRMTACQLASLGPAATPTGPG 235
>ref|XP_003545465.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like
isoform X1 [Glycine max]
gi|571507084|ref|XP_006595801.1| PREDICTED: nuclear
polyadenylated RNA-binding protein 4-like isoform X2
[Glycine max] gi|571507091|ref|XP_006595802.1|
PREDICTED: nuclear polyadenylated RNA-binding protein
4-like isoform X3 [Glycine max]
Length = 494
Score = 251 bits (642), Expect = 2e-64
Identities = 142/241 (58%), Positives = 161/241 (66%), Gaps = 5/241 (2%)
Frame = +1
Query: 1 GKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLASIGXXXXXXXXX---SEYTQRK 171
GKSKGY FILFKHR AR++L+ PQKKIGNR TSCQLAS G SEYTQRK
Sbjct: 208 GKSKGYAFILFKHRDDARKALKHPQKKIGNRTTSCQLASAGPVPAPPPNVTPVSEYTQRK 267
Query: 172 IFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALEEP 351
IFVSNV AE+DPQKL++FF ++GE+E+GPLGLDK +GKPKGFALFVYK+VESAKKALEEP
Sbjct: 268 IFVSNVNAEIDPQKLLEFFKQFGEVEDGPLGLDKNTGKPKGFALFVYKSVESAKKALEEP 327
Query: 352 HKNFEGHILHCQKAIDGPKPNKPGFHFQSPVAHHIGLHHVAGGIHGSHIPRNHNPSLFGG 531
HKN+EGH L+CQKA+DGPK +K H Q HH HH H H R G
Sbjct: 328 HKNYEGHTLYCQKAVDGPKGSKGYHHQQHSHPHH---HH----HHQPHYQRKEKNKYSSG 380
Query: 532 VGSHLSSATSAGHLMAPS-GAGHLMAPSGAGV-GFNPDXXXXXXXXXGLNPVLGQALTAL 705
G PS G+GHLMAPSG+ V GFNP GLNP LGQALTAL
Sbjct: 381 GG-------------GPSHGSGHLMAPSGSAVGGFNP-----GLPAQGLNPALGQALTAL 422
Query: 706 L 708
+
Sbjct: 423 I 423
Score = 70.9 bits (172), Expect = 6e-10
Identities = 37/85 (43%), Positives = 46/85 (54%)
Frame = +1
Query: 166 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 345
RKIFV +G + L F KYGEIE+ DKVSGK KG+A ++K + A+KAL+
Sbjct: 170 RKIFVHGLGWDATADTLTAVFGKYGEIEDCKAVTDKVSGKSKGYAFILFKHRDDARKALK 229
Query: 346 EPHKNFEGHILHCQKAIDGPKPNKP 420
P K CQ A GP P P
Sbjct: 230 HPQKKIGNRTTSCQLASAGPVPAPP 254
>ref|XP_002322576.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222867206|gb|EEF04337.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 477
Score = 251 bits (642), Expect = 2e-64
Identities = 141/253 (55%), Positives = 162/253 (64%), Gaps = 14/253 (5%)
Frame = +1
Query: 1 GKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLASIGXXXXXXXXX---------- 150
GKSKGYGFILFK R+GAR++L+EPQKKIGNR+T+CQLASIG
Sbjct: 171 GKSKGYGFILFKRRSGARKALKEPQKKIGNRMTACQLASIGPVPQSSGGQAGPVAAAAQA 230
Query: 151 ----SEYTQRKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKT 318
SEYT RKI+VSNV A+LDPQKL +FS++GEIEEGPLGLDK +GKPKGF LFVYK+
Sbjct: 231 QQPVSEYTLRKIYVSNVAADLDPQKLYSYFSEFGEIEEGPLGLDKATGKPKGFCLFVYKS 290
Query: 319 VESAKKALEEPHKNFEGHILHCQKAIDGPKPNKPGFHFQSPVAHHIGLHHVAGGIHGSHI 498
E AKKALEEPHK+FEGH+LHCQKAIDGPKP K + P HH + SH
Sbjct: 291 SEGAKKALEEPHKSFEGHMLHCQKAIDGPKPGKAQ---KQPQQHH--------NLQSSHY 339
Query: 499 PRNHNPSLFGGVGSHLSSATSAGHLMAPSGAGHLMAPSGAGVGFNPDXXXXXXXXXGLNP 678
RN G ++ + GHLMAP A SGAG+GFN LNP
Sbjct: 340 QRNDG-------GGYVGGGSRGGHLMAP-------AASGAGIGFN-----QGAAGPALNP 380
Query: 679 VLGQALTALLANQ 717
LGQALTALLA Q
Sbjct: 381 ALGQALTALLATQ 393
Score = 70.9 bits (172), Expect = 6e-10
Identities = 36/86 (41%), Positives = 48/86 (55%)
Frame = +1
Query: 166 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 345
RKIFV +G + + + L+ F YGEIE+ DKVSGK KG+ ++K A+KAL+
Sbjct: 133 RKIFVHGLGWDTNAEALMSAFKPYGEIEDCKAVCDKVSGKSKGYGFILFKRRSGARKALK 192
Query: 346 EPHKNFEGHILHCQKAIDGPKPNKPG 423
EP K + CQ A GP P G
Sbjct: 193 EPQKKIGNRMTACQLASIGPVPQSSG 218
>ref|XP_002307930.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222853906|gb|EEE91453.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 474
Score = 251 bits (642), Expect = 2e-64
Identities = 143/253 (56%), Positives = 162/253 (64%), Gaps = 14/253 (5%)
Frame = +1
Query: 1 GKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLASIGXXXXXXXXXS--------- 153
GKSKGYGFILFK R+GAR +L+EPQKKIGNR+ +CQLAS G S
Sbjct: 168 GKSKGYGFILFKKRSGARNALKEPQKKIGNRMAACQLASTGPVPQSSAGPSGPIAAAAQT 227
Query: 154 -----EYTQRKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKT 318
EYT RKI+VSNVGA LDPQKL+ FFS++GEIEEGPLGLDK +GKPKGF LFVYKT
Sbjct: 228 QQPVSEYTLRKIYVSNVGANLDPQKLMSFFSEFGEIEEGPLGLDKATGKPKGFCLFVYKT 287
Query: 319 VESAKKALEEPHKNFEGHILHCQKAIDGPKPNKPGFHFQSPVAHHIGLHHVAGGIHGSHI 498
VESAKKALEEPHK+FEGHILHCQKA+DGPK K + P HH + SH
Sbjct: 288 VESAKKALEEPHKSFEGHILHCQKAVDGPKHAKSQ---KPPQQHH--------NMQSSHY 336
Query: 499 PRNHNPSLFGGVGSHLSSATSAGHLMAPSGAGHLMAPSGAGVGFNPDXXXXXXXXXGLNP 678
RN G +++S GHLMAP+ A GAG+GFN LNP
Sbjct: 337 QRNDG-------GGYVASGGRGGHLMAPAAA-------GAGIGFNQS-----AAAPALNP 377
Query: 679 VLGQALTALLANQ 717
LGQALTALLA Q
Sbjct: 378 ALGQALTALLATQ 390
Score = 67.4 bits (163), Expect = 6e-09
Identities = 33/82 (40%), Positives = 46/82 (56%)
Frame = +1
Query: 166 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 345
RKIFV +G + + + L+ F YGEIE+ DKV+GK KG+ ++K A+ AL+
Sbjct: 130 RKIFVHGLGWDTNAEALINAFKPYGEIEDCKAVCDKVTGKSKGYGFILFKKRSGARNALK 189
Query: 346 EPHKNFEGHILHCQKAIDGPKP 411
EP K + CQ A GP P
Sbjct: 190 EPQKKIGNRMAACQLASTGPVP 211
>ref|XP_006481969.1| PREDICTED: protein gar2-like isoform X1 [Citrus sinensis]
Length = 474
Score = 251 bits (640), Expect = 3e-64
Identities = 144/263 (54%), Positives = 160/263 (60%), Gaps = 24/263 (9%)
Frame = +1
Query: 1 GKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLASIGXXXXXXXXX---------- 150
GKSKGYGFILFK R+GAR++L+EPQKKIGNR+T+CQLASIG
Sbjct: 169 GKSKGYGFILFKTRSGARKALKEPQKKIGNRMTACQLASIGPATTPAVASTATHQHQHQH 228
Query: 151 --------------SEYTQRKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKP 288
SEYTQRKIFVSNVG+EL+PQKL+ FFSKYGEIEEGPLG+DK +GKP
Sbjct: 229 QHQHQHQHQQHHQQSEYTQRKIFVSNVGSELEPQKLLAFFSKYGEIEEGPLGIDKATGKP 288
Query: 289 KGFALFVYKTVESAKKALEEPHKNFEGHILHCQKAIDGPKPNKPGFHFQSPVAHHIGLHH 468
KGF LFVYKTV++AKKALEEPHKNFEGHIL+CQKAIDGPKP K HH
Sbjct: 289 KGFCLFVYKTVDAAKKALEEPHKNFEGHILNCQKAIDGPKPGK-------------SRHH 335
Query: 469 VAGGIHGSHIPRNHNPSLFGGVGSHLSSATSAGHLMAPSGAGHLMAPSGAGVGFNPDXXX 648
A H RN GG G A +G GHLMAPSG +
Sbjct: 336 NA---QNPHFQRNEGAGYVGGAGP------------AAAGPGHLMAPSGPAI-------- 372
Query: 649 XXXXXXGLNPVLGQALTALLANQ 717
LNP LGQALTALLA Q
Sbjct: 373 PPAAAQALNPALGQALTALLATQ 395
Score = 70.1 bits (170), Expect = 1e-09
Identities = 35/80 (43%), Positives = 47/80 (58%)
Frame = +1
Query: 166 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 345
RKIFV +G + + L+ F +YGEIE+ DKVSGK KG+ ++KT A+KAL+
Sbjct: 131 RKIFVHGLGWDTKAETLIDAFKQYGEIEDCKAVCDKVSGKSKGYGFILFKTRSGARKALK 190
Query: 346 EPHKNFEGHILHCQKAIDGP 405
EP K + CQ A GP
Sbjct: 191 EPQKKIGNRMTACQLASIGP 210
>ref|XP_006430420.1| hypothetical protein CICLE_v10011637mg [Citrus clementina]
gi|557532477|gb|ESR43660.1| hypothetical protein
CICLE_v10011637mg [Citrus clementina]
Length = 476
Score = 249 bits (637), Expect = 7e-64
Identities = 143/263 (54%), Positives = 160/263 (60%), Gaps = 24/263 (9%)
Frame = +1
Query: 1 GKSKGYGFILFKHRAGARRSLQEPQKKIGNRITSCQLASIGXXXXXXXXX---------- 150
GKSKGYGFILFK R+GAR++L+EPQKKIGNR+T+CQLASIG
Sbjct: 171 GKSKGYGFILFKTRSGARKALKEPQKKIGNRMTACQLASIGPATTPAVASTATHQHQHQH 230
Query: 151 --------------SEYTQRKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKP 288
SEYTQRKIFVSNVG+EL+PQKL+ FFSKYGEIEEGPLG+DK +GKP
Sbjct: 231 QHQHQHQHQQHHQQSEYTQRKIFVSNVGSELEPQKLLAFFSKYGEIEEGPLGIDKATGKP 290
Query: 289 KGFALFVYKTVESAKKALEEPHKNFEGHILHCQKAIDGPKPNKPGFHFQSPVAHHIGLHH 468
KGF LFVYKTV++AKKALEEPHKNFEGHIL+CQ+AIDGPKP K HH
Sbjct: 291 KGFCLFVYKTVDAAKKALEEPHKNFEGHILNCQRAIDGPKPGK-------------SRHH 337
Query: 469 VAGGIHGSHIPRNHNPSLFGGVGSHLSSATSAGHLMAPSGAGHLMAPSGAGVGFNPDXXX 648
A H RN GG G A +G GHLMAPSG +
Sbjct: 338 NA---QNPHFQRNEGAGYVGGAGP------------AAAGPGHLMAPSGPAI-------- 374
Query: 649 XXXXXXGLNPVLGQALTALLANQ 717
LNP LGQALTALLA Q
Sbjct: 375 PPAAAQALNPALGQALTALLATQ 397
Score = 70.1 bits (170), Expect = 1e-09
Identities = 35/80 (43%), Positives = 47/80 (58%)
Frame = +1
Query: 166 RKIFVSNVGAELDPQKLVQFFSKYGEIEEGPLGLDKVSGKPKGFALFVYKTVESAKKALE 345
RKIFV +G + + L+ F +YGEIE+ DKVSGK KG+ ++KT A+KAL+
Sbjct: 133 RKIFVHGLGWDTKAETLIDAFKQYGEIEDCKAVCDKVSGKSKGYGFILFKTRSGARKALK 192
Query: 346 EPHKNFEGHILHCQKAIDGP 405
EP K + CQ A GP
Sbjct: 193 EPQKKIGNRMTACQLASIGP 212