BLASTX nr result

ID: Zingiber23_contig00016672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00016672
         (313 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY02690.1| Bromodomain-containing protein, putative isoform ...    59   5e-07
gb|EOY02689.1| Bromodomain and extraterminal domain protein 10, ...    59   5e-07
gb|EOY02687.1| Bromodomain-containing protein, putative isoform ...    59   5e-07

>gb|EOY02690.1| Bromodomain-containing protein, putative isoform 4 [Theobroma
           cacao]
          Length = 739

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 10/84 (11%)
 Frame = -2

Query: 222 DGAKENS----------VNKAGSDQEKSDLMNPFDMHRPLSELNCLENAADGKPSLIDSE 73
           DGAK +S          ++      EK+ + NP D ++ +S L+ LE  +  KPS ++S+
Sbjct: 481 DGAKVSSPVDALKVLEAIDSGAQLDEKTSVDNPLDRNQCVSGLDQLEQTSQPKPSSVESD 540

Query: 72  RCQEGEHAPSEKNLSPGKQYRVAL 1
            CQ+G+ AP+E+ +SP K YR AL
Sbjct: 541 SCQDGDSAPTERQISPEKLYRAAL 564


>gb|EOY02689.1| Bromodomain and extraterminal domain protein 10, putative isoform 3
           [Theobroma cacao]
          Length = 657

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 10/84 (11%)
 Frame = -2

Query: 222 DGAKENS----------VNKAGSDQEKSDLMNPFDMHRPLSELNCLENAADGKPSLIDSE 73
           DGAK +S          ++      EK+ + NP D ++ +S L+ LE  +  KPS ++S+
Sbjct: 481 DGAKVSSPVDALKVLEAIDSGAQLDEKTSVDNPLDRNQCVSGLDQLEQTSQPKPSSVESD 540

Query: 72  RCQEGEHAPSEKNLSPGKQYRVAL 1
            CQ+G+ AP+E+ +SP K YR AL
Sbjct: 541 SCQDGDSAPTERQISPEKLYRAAL 564


>gb|EOY02687.1| Bromodomain-containing protein, putative isoform 1 [Theobroma
           cacao] gi|508710791|gb|EOY02688.1| Bromodomain and
           extraterminal domain protein 10, putative isoform 1
           [Theobroma cacao]
          Length = 725

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 10/84 (11%)
 Frame = -2

Query: 222 DGAKENS----------VNKAGSDQEKSDLMNPFDMHRPLSELNCLENAADGKPSLIDSE 73
           DGAK +S          ++      EK+ + NP D ++ +S L+ LE  +  KPS ++S+
Sbjct: 481 DGAKVSSPVDALKVLEAIDSGAQLDEKTSVDNPLDRNQCVSGLDQLEQTSQPKPSSVESD 540

Query: 72  RCQEGEHAPSEKNLSPGKQYRVAL 1
            CQ+G+ AP+E+ +SP K YR AL
Sbjct: 541 SCQDGDSAPTERQISPEKLYRAAL 564


Top