BLASTX nr result
ID: Zingiber23_contig00015998
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Zingiber23_contig00015998 (429 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004968861.1| PREDICTED: probable RNA-dependent RNA polyme... 89 6e-16 ref|XP_006290518.1| hypothetical protein CARUB_v10016597mg [Caps... 80 2e-13 sp|Q8LHH9.1|SHL2_ORYSJ RecName: Full=Probable RNA-dependent RNA ... 80 2e-13 gb|EEE54718.1| hypothetical protein OsJ_02054 [Oryza sativa Japo... 80 2e-13 ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 80 4e-13 ref|XP_002877681.1| RNA-dependent RNA polymerase 6 [Arabidopsis ... 79 5e-13 ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu... 79 5e-13 gb|AAF74208.1|AF268093_1 RNA-dependent RNA polymerase [Arabidops... 78 1e-12 ref|NP_190519.1| RNA-dependent RNA polymerase 6 [Arabidopsis tha... 78 1e-12 ref|XP_002457941.1| hypothetical protein SORBIDRAFT_03g022880 [S... 78 1e-12 ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 77 3e-12 ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis... 77 3e-12 ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu... 77 3e-12 gb|AGU69384.1| RNA-dependendent RNA polymerase 6-like protein [L... 76 4e-12 ref|XP_003561343.1| PREDICTED: probable RNA-dependent RNA polyme... 76 4e-12 ref|XP_006404133.1| hypothetical protein EUTSA_v10010107mg [Eutr... 75 9e-12 gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot... 75 9e-12 dbj|BAJ34538.1| unnamed protein product [Thellungiella halophila] 75 9e-12 ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici... 75 9e-12 gb|ESW09024.1| hypothetical protein PHAVU_009G093700g [Phaseolus... 74 2e-11 >ref|XP_004968861.1| PREDICTED: probable RNA-dependent RNA polymerase SHL2-like [Setaria italica] Length = 1211 Score = 89.0 bits (219), Expect = 6e-16 Identities = 43/87 (49%), Positives = 54/87 (62%), Gaps = 4/87 (4%) Frame = -2 Query: 254 GILDAMDLPPTHKEQDNLTVSQVGFGGFDANVTAKQLADFLEDEVGIIWRCRVKSSWTPP 75 G L PP +L ++QV GGFDA VTA+ LADFLE EVG +WRCRVK+SWTPP Sbjct: 2 GSLRGAAAPPPAPRAGDLVITQVSLGGFDATVTARDLADFLESEVGQVWRCRVKTSWTPP 61 Query: 74 DSFPVYHV----PVGGEASWKEDYERV 6 D++P + + P G A Y+RV Sbjct: 62 DAYPDFLLPAVTPAAGAAGQPPQYDRV 88 >ref|XP_006290518.1| hypothetical protein CARUB_v10016597mg [Capsella rubella] gi|482559225|gb|EOA23416.1| hypothetical protein CARUB_v10016597mg [Capsella rubella] Length = 1197 Score = 80.5 bits (197), Expect = 2e-13 Identities = 34/67 (50%), Positives = 47/67 (70%) Frame = -2 Query: 206 NLTVSQVGFGGFDANVTAKQLADFLEDEVGIIWRCRVKSSWTPPDSFPVYHVPVGGEASW 27 N V+QV GGF + TAKQL D+LEDEVG++WRCR+K+SWTPP S+P + + Sbjct: 9 NSVVTQVSIGGFGESTTAKQLTDYLEDEVGLVWRCRLKNSWTPPGSYPNFEIADTSNIPR 68 Query: 26 KEDYERV 6 +DY++V Sbjct: 69 IDDYKKV 75 >sp|Q8LHH9.1|SHL2_ORYSJ RecName: Full=Probable RNA-dependent RNA polymerase SHL2; AltName: Full=Protein SHOOTLESS 2 gi|21328146|dbj|BAC00725.1| putative RNA-dependent RNA polymerase [Oryza sativa Japonica Group] gi|157279691|dbj|BAF80151.1| SHOOTLESS2 [Oryza sativa Japonica Group] Length = 1218 Score = 80.5 bits (197), Expect = 2e-13 Identities = 34/53 (64%), Positives = 42/53 (79%) Frame = -2 Query: 206 NLTVSQVGFGGFDANVTAKQLADFLEDEVGIIWRCRVKSSWTPPDSFPVYHVP 48 +L +QV GGFDA V A LADFLE EVG++WRCRVK+SWTPPDS+P + +P Sbjct: 26 DLVTTQVSLGGFDAGVAAGDLADFLEHEVGLVWRCRVKTSWTPPDSYPDFALP 78 >gb|EEE54718.1| hypothetical protein OsJ_02054 [Oryza sativa Japonica Group] Length = 1571 Score = 80.5 bits (197), Expect = 2e-13 Identities = 34/53 (64%), Positives = 42/53 (79%) Frame = -2 Query: 206 NLTVSQVGFGGFDANVTAKQLADFLEDEVGIIWRCRVKSSWTPPDSFPVYHVP 48 +L +QV GGFDA V A LADFLE EVG++WRCRVK+SWTPPDS+P + +P Sbjct: 26 DLVTTQVSLGGFDAGVAAGDLADFLEHEVGLVWRCRVKTSWTPPDSYPDFALP 78 >ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Fragaria vesca subsp. vesca] Length = 1197 Score = 79.7 bits (195), Expect = 4e-13 Identities = 31/71 (43%), Positives = 52/71 (73%) Frame = -2 Query: 218 KEQDNLTVSQVGFGGFDANVTAKQLADFLEDEVGIIWRCRVKSSWTPPDSFPVYHVPVGG 39 + +++ V+QV FGGF ++VTAK+L +LEDE+G+++RCR+K+SWTPP+S P + + Sbjct: 5 ERENDTVVTQVSFGGFGSHVTAKELVSYLEDEIGLVFRCRLKTSWTPPESVPNFEISDAA 64 Query: 38 EASWKEDYERV 6 + +DY +V Sbjct: 65 DIETTDDYRKV 75 >ref|XP_002877681.1| RNA-dependent RNA polymerase 6 [Arabidopsis lyrata subsp. lyrata] gi|297323519|gb|EFH53940.1| RNA-dependent RNA polymerase 6 [Arabidopsis lyrata subsp. lyrata] Length = 1197 Score = 79.3 bits (194), Expect = 5e-13 Identities = 33/67 (49%), Positives = 47/67 (70%) Frame = -2 Query: 206 NLTVSQVGFGGFDANVTAKQLADFLEDEVGIIWRCRVKSSWTPPDSFPVYHVPVGGEASW 27 N V+QV GGF + TAKQL D+LEDE+G++WRCR+K+SWTPP S+P + + Sbjct: 9 NSVVTQVSIGGFGESTTAKQLTDYLEDELGLVWRCRLKTSWTPPGSYPNFEIADTSSIPK 68 Query: 26 KEDYERV 6 +DY++V Sbjct: 69 FDDYKKV 75 >ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa] gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa] Length = 1198 Score = 79.3 bits (194), Expect = 5e-13 Identities = 33/64 (51%), Positives = 48/64 (75%) Frame = -2 Query: 197 VSQVGFGGFDANVTAKQLADFLEDEVGIIWRCRVKSSWTPPDSFPVYHVPVGGEASWKED 18 V+QV GGFD +VTAK L ++LE E+G++WRCR+K+SWTPP+S+P + + + + ED Sbjct: 12 VTQVSLGGFDIHVTAKDLLEYLEREIGLVWRCRLKTSWTPPESYPNFEITDITKITRTED 71 Query: 17 YERV 6 Y RV Sbjct: 72 YRRV 75 >gb|AAF74208.1|AF268093_1 RNA-dependent RNA polymerase [Arabidopsis thaliana] Length = 1196 Score = 78.2 bits (191), Expect = 1e-12 Identities = 33/64 (51%), Positives = 46/64 (71%) Frame = -2 Query: 197 VSQVGFGGFDANVTAKQLADFLEDEVGIIWRCRVKSSWTPPDSFPVYHVPVGGEASWKED 18 V+QV GGF + TAKQL D+LEDEVGI+WRCR+K+SWTPP S+P + + ++ Sbjct: 12 VTQVSIGGFGESTTAKQLTDYLEDEVGIVWRCRLKTSWTPPGSYPNFEIADTSNIPSIDE 71 Query: 17 YERV 6 Y++V Sbjct: 72 YKKV 75 >ref|NP_190519.1| RNA-dependent RNA polymerase 6 [Arabidopsis thaliana] gi|75337188|sp|Q9SG02.1|RDR6_ARATH RecName: Full=RNA-dependent RNA polymerase 6; Short=AtRDRP6; AltName: Full=Protein SILENCING DEFECTIVE 1; AltName: Full=Protein SUPPRESSOR OF GENE SILENCING 2; AltName: Full=RNA-directed RNA polymerase 6 gi|12324444|gb|AAG52184.1|AC012329_11 putative RNA-directed RNA polymerase; 73997-69985 [Arabidopsis thaliana] gi|6899955|emb|CAB71285.1| RNA-directed RNA polymerase-like protein [Arabidopsis thaliana] gi|8164028|gb|AAF73959.1| SGS2 [Arabidopsis thaliana] gi|332645029|gb|AEE78550.1| RNA-dependent RNA polymerase 6 [Arabidopsis thaliana] Length = 1196 Score = 78.2 bits (191), Expect = 1e-12 Identities = 33/64 (51%), Positives = 46/64 (71%) Frame = -2 Query: 197 VSQVGFGGFDANVTAKQLADFLEDEVGIIWRCRVKSSWTPPDSFPVYHVPVGGEASWKED 18 V+QV GGF + TAKQL D+LEDEVGI+WRCR+K+SWTPP S+P + + ++ Sbjct: 12 VTQVSIGGFGESTTAKQLTDYLEDEVGIVWRCRLKTSWTPPGSYPNFEIADTSNIPSIDE 71 Query: 17 YERV 6 Y++V Sbjct: 72 YKKV 75 >ref|XP_002457941.1| hypothetical protein SORBIDRAFT_03g022880 [Sorghum bicolor] gi|241929916|gb|EES03061.1| hypothetical protein SORBIDRAFT_03g022880 [Sorghum bicolor] Length = 1207 Score = 78.2 bits (191), Expect = 1e-12 Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 1/84 (1%) Frame = -2 Query: 254 GILDAMDLPPTHKEQDNLTVSQVGFGGFDANVTAKQLADFLEDEVGIIWRCRVKSSWTPP 75 G L P +L +QV GGFDA V A LADFLE + G++WRCRVK+SWTPP Sbjct: 2 GSLRGAAAPSPAPRAGDLVTTQVSLGGFDATVKALDLADFLELKAGLVWRCRVKTSWTPP 61 Query: 74 DSFPVYHVP-VGGEASWKEDYERV 6 D++P + +P V A+ Y+RV Sbjct: 62 DAYPDFLLPTVTSAAAQPPQYDRV 85 >ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Cucumis sativus] Length = 1197 Score = 76.6 bits (187), Expect = 3e-12 Identities = 32/72 (44%), Positives = 51/72 (70%) Frame = -2 Query: 218 KEQDNLTVSQVGFGGFDANVTAKQLADFLEDEVGIIWRCRVKSSWTPPDSFPVYHVPVGG 39 +E + + V+QV FGGFD++V A+ L +LE E+G++ RCR+K+SWTPP+S+P + V Sbjct: 4 EEGEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVSNVA 63 Query: 38 EASWKEDYERVV 3 +DY++VV Sbjct: 64 NVIKSDDYKKVV 75 >ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis sativus] gi|316989907|gb|ADU77019.1| RNA-dependent RNA polymerase 6 [Cucumis sativus] Length = 1197 Score = 76.6 bits (187), Expect = 3e-12 Identities = 32/72 (44%), Positives = 51/72 (70%) Frame = -2 Query: 218 KEQDNLTVSQVGFGGFDANVTAKQLADFLEDEVGIIWRCRVKSSWTPPDSFPVYHVPVGG 39 +E + + V+QV FGGFD++V A+ L +LE E+G++ RCR+K+SWTPP+S+P + V Sbjct: 4 EEGEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVSNVA 63 Query: 38 EASWKEDYERVV 3 +DY++VV Sbjct: 64 NVIKSDDYKKVV 75 >ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa] gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa] Length = 1200 Score = 76.6 bits (187), Expect = 3e-12 Identities = 32/65 (49%), Positives = 47/65 (72%) Frame = -2 Query: 197 VSQVGFGGFDANVTAKQLADFLEDEVGIIWRCRVKSSWTPPDSFPVYHVPVGGEASWKED 18 V+QV GGFD +VTAK L ++L+ +G++WRCR+K+SWTPP+S+P + + + ED Sbjct: 12 VTQVSVGGFDIHVTAKDLLEYLDRAIGLVWRCRLKTSWTPPESYPNFEITDITKIERTED 71 Query: 17 YERVV 3 Y RVV Sbjct: 72 YRRVV 76 >gb|AGU69384.1| RNA-dependendent RNA polymerase 6-like protein [Lotus japonicus] Length = 1201 Score = 76.3 bits (186), Expect = 4e-12 Identities = 35/78 (44%), Positives = 53/78 (67%) Frame = -2 Query: 239 MDLPPTHKEQDNLTVSQVGFGGFDANVTAKQLADFLEDEVGIIWRCRVKSSWTPPDSFPV 60 MDL + KE V+QV GGFD+ V A LA+FLE+ +G+++RCR+K+SWTPP+S+P Sbjct: 1 MDLGGSEKES---VVTQVSIGGFDSEVKAHDLAEFLENRIGLVYRCRLKTSWTPPESYPE 57 Query: 59 YHVPVGGEASWKEDYERV 6 ++V +DY++V Sbjct: 58 FNVADTALVKRTDDYKKV 75 >ref|XP_003561343.1| PREDICTED: probable RNA-dependent RNA polymerase SHL2-like [Brachypodium distachyon] Length = 1208 Score = 76.3 bits (186), Expect = 4e-12 Identities = 32/48 (66%), Positives = 39/48 (81%) Frame = -2 Query: 206 NLTVSQVGFGGFDANVTAKQLADFLEDEVGIIWRCRVKSSWTPPDSFP 63 +L +QV GGF A V+A +LADFLE E G++WRCRVK+SWTPPDSFP Sbjct: 15 DLVTTQVSLGGFGAGVSASELADFLEYEAGLVWRCRVKTSWTPPDSFP 62 >ref|XP_006404133.1| hypothetical protein EUTSA_v10010107mg [Eutrema salsugineum] gi|557105252|gb|ESQ45586.1| hypothetical protein EUTSA_v10010107mg [Eutrema salsugineum] Length = 927 Score = 75.1 bits (183), Expect = 9e-12 Identities = 34/67 (50%), Positives = 44/67 (65%) Frame = -2 Query: 206 NLTVSQVGFGGFDANVTAKQLADFLEDEVGIIWRCRVKSSWTPPDSFPVYHVPVGGEASW 27 N V+QV GGF + TAK+L D+LE EVG IWRCR+K+SWTPP S+P + + Sbjct: 25 NSVVTQVSIGGFGQSTTAKELTDYLEHEVGHIWRCRLKNSWTPPGSYPNFEIADTSNIRN 84 Query: 26 KEDYERV 6 DY+RV Sbjct: 85 FNDYKRV 91 >gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana] Length = 1197 Score = 75.1 bits (183), Expect = 9e-12 Identities = 35/70 (50%), Positives = 49/70 (70%) Frame = -2 Query: 212 QDNLTVSQVGFGGFDANVTAKQLADFLEDEVGIIWRCRVKSSWTPPDSFPVYHVPVGGEA 33 + +L V+Q+ GGFD +V AK L+++LE++VG +WRCR+K S TPPDS+P Y V Sbjct: 7 EKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISATPPDSYPTYDVDAARVH 66 Query: 32 SWKEDYERVV 3 K DYE+VV Sbjct: 67 RMK-DYEKVV 75 >dbj|BAJ34538.1| unnamed protein product [Thellungiella halophila] Length = 998 Score = 75.1 bits (183), Expect = 9e-12 Identities = 34/67 (50%), Positives = 44/67 (65%) Frame = -2 Query: 206 NLTVSQVGFGGFDANVTAKQLADFLEDEVGIIWRCRVKSSWTPPDSFPVYHVPVGGEASW 27 N V+QV GGF + TAK+L D+LE EVG IWRCR+K+SWTPP S+P + + Sbjct: 9 NSVVTQVSIGGFGQSTTAKELTDYLEHEVGHIWRCRLKNSWTPPGSYPNFEIADTSNIRN 68 Query: 26 KEDYERV 6 DY+RV Sbjct: 69 FNDYKRV 75 >ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis] gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase, putative [Ricinus communis] Length = 1203 Score = 75.1 bits (183), Expect = 9e-12 Identities = 31/73 (42%), Positives = 48/73 (65%) Frame = -2 Query: 224 THKEQDNLTVSQVGFGGFDANVTAKQLADFLEDEVGIIWRCRVKSSWTPPDSFPVYHVPV 45 T + + V+QV FGGFD +VTA+ L +L++E+G +WRCR+K+SWTPP+S+P + + Sbjct: 3 TKRREKETVVTQVSFGGFDKDVTARDLVAYLDNEIGQVWRCRLKTSWTPPESYPNFEITD 62 Query: 44 GGEASWKEDYERV 6 + Y RV Sbjct: 63 TAVIQRVDAYRRV 75 >gb|ESW09024.1| hypothetical protein PHAVU_009G093700g [Phaseolus vulgaris] Length = 1204 Score = 74.3 bits (181), Expect = 2e-11 Identities = 30/78 (38%), Positives = 54/78 (69%) Frame = -2 Query: 239 MDLPPTHKEQDNLTVSQVGFGGFDANVTAKQLADFLEDEVGIIWRCRVKSSWTPPDSFPV 60 MDL + K+ V+Q+ GGF + V A +L ++LED++G+++RCR+K+SWTPP+S+P Sbjct: 1 MDLEASEKDS---VVTQISIGGFGSEVKASELVNYLEDKIGLVYRCRLKTSWTPPESYPE 57 Query: 59 YHVPVGGEASWKEDYERV 6 +++ + +DY++V Sbjct: 58 FNITDTAKIKGTDDYKKV 75