BLASTX nr result
ID: Zingiber23_contig00015672
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00015672
(664 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACN28142.1| unknown [Zea mays] gi|414585220|tpg|DAA35791.1| T... 103 4e-20
ref|NP_001130367.1| uncharacterized protein LOC100191462 [Zea ma... 103 4e-20
ref|XP_004976971.1| PREDICTED: RNA-binding protein Musashi homol... 102 1e-19
ref|XP_002448611.1| hypothetical protein SORBIDRAFT_06g030090 [S... 101 2e-19
ref|NP_001148086.1| LOC100281694 [Zea mays] gi|195615710|gb|ACG2... 101 2e-19
ref|XP_003580645.1| PREDICTED: uncharacterized protein LOC100844... 101 2e-19
ref|NP_001054022.1| Os04g0636900 [Oryza sativa Japonica Group] g... 92 1e-16
dbj|BAJ90049.1| predicted protein [Hordeum vulgare subsp. vulgar... 90 7e-16
gb|EMS56525.1| RNA-binding protein Musashi-like protein 1 [Triti... 84 5e-14
gb|EMT02540.1| RNA-binding Musashi-1-like protein [Aegilops taus... 76 8e-12
ref|XP_002457616.1| hypothetical protein SORBIDRAFT_03g010380 [S... 73 7e-11
ref|XP_006575610.1| PREDICTED: nuclear polyadenylated RNA-bindin... 72 2e-10
ref|XP_003545465.1| PREDICTED: nuclear polyadenylated RNA-bindin... 70 4e-10
ref|XP_002879905.1| RNA recognition motif-containing protein [Ar... 70 6e-10
ref|NP_181639.1| RNA recognition motif-containing protein [Arabi... 70 7e-10
gb|EOY34317.1| RNA-binding family protein, putative isoform 1 [T... 69 1e-09
gb|EXC19709.1| Uncharacterized RNA-binding protein [Morus notabi... 69 1e-09
ref|XP_006294217.1| hypothetical protein CARUB_v10023213mg [Caps... 69 1e-09
ref|XP_004967762.1| PREDICTED: nuclear localization sequence-bin... 69 2e-09
ref|XP_004148449.1| PREDICTED: uncharacterized protein LOC101211... 69 2e-09
>gb|ACN28142.1| unknown [Zea mays] gi|414585220|tpg|DAA35791.1| TPA: hypothetical
protein ZEAMMB73_646207 [Zea mays]
gi|414585221|tpg|DAA35792.1| TPA: hypothetical protein
ZEAMMB73_646207 [Zea mays]
Length = 521
Score = 103 bits (258), Expect = 4e-20
Identities = 85/236 (36%), Positives = 108/236 (45%), Gaps = 32/236 (13%)
Frame = -1
Query: 658 AGSTTNFQNSAPN-HLNSNPGPSISFTTYQDNVARKIYVGNVHADVDGG----------- 515
A S N+ PN + NS S S ++ DN+ RKI+VGNVHADVD
Sbjct: 195 AQSQNPISNANPNANSNSTSNASGSSSSQTDNIQRKIFVGNVHADVDVDRLYEYFAQFGE 254
Query: 514 -XXXXXXXXXXXXXPKGYALFVYKTVEGAMRALEEPNKNFEGIILQCERAND-RSKGAHH 341
PKG+ALFVYK+VE A RALEEP KNF+G L ++A D R+KG+
Sbjct: 255 IEEGPLGFDKNTGRPKGFALFVYKSVESARRALEEPIKNFDGKTLNVQKAIDGRTKGSSG 314
Query: 340 YNTAAPLNAAPNKGNLNGPGYTMP-----------------VSDIGLAQQAALMGQGFLX 212
NT N+ P ++ T P V D+ AQQAA++G G
Sbjct: 315 MNTNT--NSNPTTASVVAAQMTAPSSVAISPYDASAYSATVVPDMSFAQQAAMLGLG--- 369
Query: 211 XXXXXXXXXXXQSNXXXXXXXXXAGQNPAAFGMTPSAL-TLNPAFATTFGAAGSQQ 47
+ A QNPAA GM+P+ L +NPAFA AG QQ
Sbjct: 370 ------AQQQAFTQPNAMLAMIAAMQNPAALGMSPAMLAAMNPAFAAAALGAGGQQ 419
>ref|NP_001130367.1| uncharacterized protein LOC100191462 [Zea mays]
gi|194688948|gb|ACF78558.1| unknown [Zea mays]
Length = 424
Score = 103 bits (258), Expect = 4e-20
Identities = 85/236 (36%), Positives = 108/236 (45%), Gaps = 32/236 (13%)
Frame = -1
Query: 658 AGSTTNFQNSAPN-HLNSNPGPSISFTTYQDNVARKIYVGNVHADVDGG----------- 515
A S N+ PN + NS S S ++ DN+ RKI+VGNVHADVD
Sbjct: 98 AQSQNPISNANPNANSNSTSNASGSSSSQTDNIQRKIFVGNVHADVDVDRLYEYFAQFGE 157
Query: 514 -XXXXXXXXXXXXXPKGYALFVYKTVEGAMRALEEPNKNFEGIILQCERAND-RSKGAHH 341
PKG+ALFVYK+VE A RALEEP KNF+G L ++A D R+KG+
Sbjct: 158 IEEGPLGFDKNTGRPKGFALFVYKSVESARRALEEPIKNFDGKTLNVQKAIDGRTKGSSG 217
Query: 340 YNTAAPLNAAPNKGNLNGPGYTMP-----------------VSDIGLAQQAALMGQGFLX 212
NT N+ P ++ T P V D+ AQQAA++G G
Sbjct: 218 MNTNT--NSNPTTASVVAAQMTAPSSVAISPYDASAYSATVVPDMSFAQQAAMLGLG--- 272
Query: 211 XXXXXXXXXXXQSNXXXXXXXXXAGQNPAAFGMTPSAL-TLNPAFATTFGAAGSQQ 47
+ A QNPAA GM+P+ L +NPAFA AG QQ
Sbjct: 273 ------AQQQAFTQPNAMLAMIAAMQNPAALGMSPAMLAAMNPAFAAAALGAGGQQ 322
>ref|XP_004976971.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Setaria
italica]
Length = 527
Score = 102 bits (254), Expect = 1e-19
Identities = 83/237 (35%), Positives = 113/237 (47%), Gaps = 32/237 (13%)
Frame = -1
Query: 661 SAGSTTNFQNSAPNHLNSNPGPSISFTTYQ-DNVARKIYVGNVHADVDGG---------- 515
S ++N + ++ NS ++S ++ Q DN+ RKI+VGNVHADVD
Sbjct: 198 SQNPSSNANTNTNSNSNSGTTSNVSGSSSQPDNMPRKIFVGNVHADVDVDRLYEYFSQFG 257
Query: 514 --XXXXXXXXXXXXXPKGYALFVYKTVEGAMRALEEPNKNFEGIILQCERAND-RSKGAH 344
PKG+ALFVYK+VE A RALEEP +NF+G +L ++A D R+KG+
Sbjct: 258 EIEEGPLGFDKNTGKPKGFALFVYKSVESARRALEEPVRNFDGKMLNIQKAIDGRTKGSS 317
Query: 343 HYNT-----------------AAPLNAAPNKGNLNGPGYTMPVSDIGLAQQAALMGQGFL 215
N AP +AA + + + G V D+G AQQAA++G G
Sbjct: 318 GTNANANSNATTASAAAAAQMTAPASAAISPYDASAYG-AAAVPDLGFAQQAAMLGLG-- 374
Query: 214 XXXXXXXXXXXXQSNXXXXXXXXXAGQNPAAFGMTPSAL-TLNPAFATTFGAAGSQQ 47
+ A QNPAA GMTP+ L +NPAFA AG QQ
Sbjct: 375 -------AQQQAFAQPNAMLAMIAAMQNPAALGMTPAMLAAMNPAFAAAALGAGGQQ 424
>ref|XP_002448611.1| hypothetical protein SORBIDRAFT_06g030090 [Sorghum bicolor]
gi|241939794|gb|EES12939.1| hypothetical protein
SORBIDRAFT_06g030090 [Sorghum bicolor]
Length = 527
Score = 101 bits (252), Expect = 2e-19
Identities = 83/240 (34%), Positives = 110/240 (45%), Gaps = 35/240 (14%)
Frame = -1
Query: 661 SAGSTTNFQNSAPNHLNSNPGPSISFTTYQDNVARKIYVGNVHADVDGG----------- 515
S ++N +A + N+ S S ++ DN+ RKI+VGNVHADVD
Sbjct: 198 SQNPSSNANTNANSSSNTTTNASGSSSSQPDNMQRKIFVGNVHADVDVDRLYEYFAQFGE 257
Query: 514 -XXXXXXXXXXXXXPKGYALFVYKTVEGAMRALEEPNKNFEGIILQCERAND-RSKGAHH 341
PKG+ALFVY++ E A RALEEP KNF+G L ++A D R+KG+
Sbjct: 258 IEEGPLGFDKNTGKPKGFALFVYRSAESARRALEEPMKNFDGKTLNVQKAIDGRTKGSSG 317
Query: 340 YNT---------------------AAPLNAAPNKGNLNGPGYTMPVSDIGLAQQAALMGQ 224
NT AP +AA + + + G T V D+ AQQAA++G
Sbjct: 318 ANTNANSNPTTASVAAAAAAAAQMTAPASAAISPYDASAYGAT-AVPDMSFAQQAAMLGL 376
Query: 223 GFLXXXXXXXXXXXXQSNXXXXXXXXXAGQNPAAFGMTPSAL-TLNPAFATTFGAAGSQQ 47
G + A QNPAA GMTP+ L +NPAFA AG QQ
Sbjct: 377 G---------AQQQAFAQPNAMLAMIAAMQNPAALGMTPAMLAAMNPAFAAAALGAGGQQ 427
>ref|NP_001148086.1| LOC100281694 [Zea mays] gi|195615710|gb|ACG29685.1| RNA-binding
protein AKIP1 [Zea mays] gi|413919663|gb|AFW59595.1|
RNA-binding protein AKIP1 isoform 1 [Zea mays]
gi|413919664|gb|AFW59596.1| RNA-binding protein AKIP1
isoform 2 [Zea mays]
Length = 521
Score = 101 bits (252), Expect = 2e-19
Identities = 84/239 (35%), Positives = 110/239 (46%), Gaps = 34/239 (14%)
Frame = -1
Query: 661 SAGSTTNFQNSAPNHLNSNPGPSISFTTYQDNVARKIYVGNVHADVDGGXXXXXXXXXXX 482
S ++N +A ++ N+ S S ++ DN+ RKI+VGNVHADVD
Sbjct: 197 SQNPSSNPNTNANSNSNTTTNASGSSSSQPDNMPRKIFVGNVHADVDVDRLYNYFAQFGE 256
Query: 481 XX------------PKGYALFVYKTVEGAMRALEEPNKNFEGIILQCERAND-RSKGAHH 341
PKG+ALFVYK+VE A RALEEP KNF+G L ++A D R+KG+
Sbjct: 257 IEEGPFGFDKNTGKPKGFALFVYKSVESARRALEEPMKNFDGKTLNVQKAIDGRTKGSSG 316
Query: 340 YNT--------------------AAPLNAAPNKGNLNGPGYTMPVSDIGLAQQAALMGQG 221
NT AP AA + + + G T V D+ AQQAA++G G
Sbjct: 317 TNTNANSNPTTASVAAAAAAAQMTAPATAAISPYDPSAYGAT-AVPDMSFAQQAAMLGFG 375
Query: 220 FLXXXXXXXXXXXXQSNXXXXXXXXXAGQNPAAFGMTPSAL-TLNPAFATTFGAAGSQQ 47
+ A QNPAA GMTP+ +NPAFA AG QQ
Sbjct: 376 ---------AQQQAFAQPNAMLAMIAAMQNPAALGMTPAMFAAMNPAFAAAALGAGGQQ 425
>ref|XP_003580645.1| PREDICTED: uncharacterized protein LOC100844841 [Brachypodium
distachyon]
Length = 510
Score = 101 bits (251), Expect = 2e-19
Identities = 89/240 (37%), Positives = 112/240 (46%), Gaps = 32/240 (13%)
Frame = -1
Query: 664 ASAGSTTNFQN-SAPNHLNSNPGPS----ISFTTYQDNVARKIYVGNVHADVDGG----- 515
A S + QN S+ N+ NSNPG + + ++ DN+ RKI+VGNVHADVD
Sbjct: 188 APPSSQSQSQNPSSNNNANSNPGATNTAPATSSSQPDNMPRKIFVGNVHADVDVDRLYEY 247
Query: 514 -------XXXXXXXXXXXXXPKGYALFVYKTVEGAMRALEEPNKNFEGIILQCERAND-R 359
PKG+ALFVYK+VE A RALEEP +NF+G +L ++A D R
Sbjct: 248 FSQFGEIEEGPLGFDKSTGKPKGFALFVYKSVESARRALEEPMRNFDGKMLNIQKAIDGR 307
Query: 358 SKGAHHYNTAA--------------PLNAAPNKGNLNGPGYTMPVSDIGLAQQAALMGQG 221
+KG NT+A P AA + + G T V D+G AQQAA+MG G
Sbjct: 308 TKGTPGMNTSAANPNATTASAQMAVPSIAAITPYDTSAYGAT-AVHDMGFAQQAAMMGMG 366
Query: 220 FLXXXXXXXXXXXXQSNXXXXXXXXXAGQNPAAFGMTPSALTLNPAFATTFGAAGSQQTA 41
Q N A QNPA +LNPAFA AG Q TA
Sbjct: 367 -------AQQQAFAQPNTAMLAMMAAAIQNPAMLA------SLNPAFAAAALGAGGQHTA 413
>ref|NP_001054022.1| Os04g0636900 [Oryza sativa Japonica Group]
gi|21741248|emb|CAD41732.1| OSJNBb0034I13.9 [Oryza
sativa Japonica Group] gi|113565593|dbj|BAF15936.1|
Os04g0636900 [Oryza sativa Japonica Group]
gi|215715302|dbj|BAG95053.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215764985|dbj|BAG86682.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 515
Score = 92.0 bits (227), Expect = 1e-16
Identities = 84/249 (33%), Positives = 105/249 (42%), Gaps = 32/249 (12%)
Frame = -1
Query: 652 STTNFQNSAPNHLNSNPGPSISFTTYQDNVARKIYVGNVHADVDGG------------XX 509
S TN + A N+ S + ++ DN+ RKI+VGNVHADVD
Sbjct: 205 SNTNANSGAANNAGS------ASSSQPDNMQRKIFVGNVHADVDVDRLYEYFSQFGEIEE 258
Query: 508 XXXXXXXXXXXPKGYALFVYKTVEGAMRALEEPNKNFEGIILQCERAND-RSKGAHHYN- 335
PKG+ALFVYK+VE A RALEEP +NF+G +L ++A D R+K N
Sbjct: 259 GPLGFDKTTGKPKGFALFVYKSVESARRALEEPTRNFDGKMLNVQKAIDGRTKNTPGMNA 318
Query: 334 ------TAAPLNAAPNKGNLNGPGY------------TMPVSDIGLAQQAALMGQGFLXX 209
TAA AA + P V D+G AQQAA++G G
Sbjct: 319 NSNPSGTAASAAAAAAAAQMTAPATAAITPYDASAYGATAVPDLGYAQQAAMLGLG---- 374
Query: 208 XXXXXXXXXXQSNXXXXXXXXXAGQNPAAFGMTPSALTLNPAFATTFGAAGSQQTAPTLP 29
Q N A QNPA TLNPAFA AG QQ
Sbjct: 375 ---AQQQAFAQPNAAMLAMMAAAMQNPAMLA------TLNPAFAAAALGAGGQQV----- 420
Query: 28 QMAQVPNYG 2
A +P +G
Sbjct: 421 HAAGIPGFG 429
>dbj|BAJ90049.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326505372|dbj|BAJ91121.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|326519588|dbj|BAK00167.1|
predicted protein [Hordeum vulgare subsp. vulgare]
gi|326530954|dbj|BAK01275.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 506
Score = 89.7 bits (221), Expect = 7e-16
Identities = 80/234 (34%), Positives = 107/234 (45%), Gaps = 27/234 (11%)
Frame = -1
Query: 658 AGSTTNFQNSAPNHLNSNPGPSISFTTYQDNVARKIYVGNVHADVDGG------------ 515
A + N ++A + +N P+ S ++ DN+ RKI+VGNVHADVD
Sbjct: 193 ASQSQNPSSNASSGAANNSAPASS-SSQADNMQRKIFVGNVHADVDVNRLYEYFSQFGEI 251
Query: 514 XXXXXXXXXXXXXPKGYALFVYKTVEGAMRALEEPNKNFEGIILQCERAND-RSKGAHHY 338
PKG+ALFVYK+V+ A RALEEP ++F+G +L ++A D R+KG
Sbjct: 252 EEGPLGFDKSTGKPKGFALFVYKSVDSARRALEEPMRSFDGKMLNVQKAIDGRTKGTSGS 311
Query: 337 NTAA--------------PLNAAPNKGNLNGPGYTMPVSDIGLAQQAALMGQGFLXXXXX 200
N++A P AA N + + G V D+G AQQAAL+G G
Sbjct: 312 NSSANNANATAASTQMTVPSIAAINPYDPSAYG-AAAVHDMGFAQQAALLGMG------- 363
Query: 199 XXXXXXXQSNXXXXXXXXXAGQNPAAFGMTPSALTLNPAFATTFGAAGSQQTAP 38
Q N A QNPA +LNPAFA AG Q P
Sbjct: 364 AQQQAFAQPNTAMLAMMAAAMQNPAMLA------SLNPAFAAAALGAGGQAGIP 411
>gb|EMS56525.1| RNA-binding protein Musashi-like protein 1 [Triticum urartu]
Length = 285
Score = 83.6 bits (205), Expect = 5e-14
Identities = 73/201 (36%), Positives = 91/201 (45%), Gaps = 27/201 (13%)
Frame = -1
Query: 559 RKIYVGNVHADVDGG------------XXXXXXXXXXXXXPKGYALFVYKTVEGAMRALE 416
RKI+VGNVHADVD PKG+ALFVYK+V+ A RALE
Sbjct: 3 RKIFVGNVHADVDVNRLYEYFSQFGEIEEGPLGFDKSTGKPKGFALFVYKSVDSARRALE 62
Query: 415 EPNKNFEGIILQCERAND-RSKGAHHYNTAA--------------PLNAAPNKGNLNGPG 281
EP +NF+G +L ++A D R+KG+ N++A P AA N + + G
Sbjct: 63 EPMRNFDGKMLNVQKAIDGRTKGSSGSNSSANNANATAASTQMTVPSIAAINPYDPSAYG 122
Query: 280 YTMPVSDIGLAQQAALMGQGFLXXXXXXXXXXXXQSNXXXXXXXXXAGQNPAAFGMTPSA 101
V D+G AQQAAL+G G Q N A QNPA
Sbjct: 123 -AAAVHDMGFAQQAALLGMG-------AQQQAFAQPNTAMLAMMAAAMQNPAMLA----- 169
Query: 100 LTLNPAFATTFGAAGSQQTAP 38
+LNPAFA AG Q P
Sbjct: 170 -SLNPAFAAAALGAGGQSGLP 189
>gb|EMT02540.1| RNA-binding Musashi-1-like protein [Aegilops tauschii]
Length = 214
Score = 76.3 bits (186), Expect = 8e-12
Identities = 57/142 (40%), Positives = 73/142 (51%), Gaps = 27/142 (19%)
Frame = -1
Query: 559 RKIYVGNVHADVDGG------------XXXXXXXXXXXXXPKGYALFVYKTVEGAMRALE 416
RKI+VGNVHADVD PKG+ALFVYK+V+ A RALE
Sbjct: 3 RKIFVGNVHADVDVNRLYEYFSQFGEIEEGPLGFDKSTGKPKGFALFVYKSVDSARRALE 62
Query: 415 EPNKNFEGIILQCERAND-RSKGAHHYNTAA--------------PLNAAPNKGNLNGPG 281
EP +NF+G +L ++A D R+KG+ N+ A P AA N + + G
Sbjct: 63 EPMRNFDGKMLNVQKAIDGRTKGSSGSNSNANNANATAASTQMTVPSIAAINPYDPSAYG 122
Query: 280 YTMPVSDIGLAQQAALMGQGFL 215
T V D+G AQQAAL+G L
Sbjct: 123 AT-AVHDMGFAQQAALLGMAGL 143
>ref|XP_002457616.1| hypothetical protein SORBIDRAFT_03g010380 [Sorghum bicolor]
gi|241929591|gb|EES02736.1| hypothetical protein
SORBIDRAFT_03g010380 [Sorghum bicolor]
Length = 464
Score = 73.2 bits (178), Expect = 7e-11
Identities = 44/130 (33%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Frame = -1
Query: 628 APNHLNSNPGPS-ISFTTYQDNVARKIYVGNVHADVDGGXXXXXXXXXXXXX-------- 476
APN + P P+ + + RKI+V NV AD+D
Sbjct: 217 APNSAGAVPAPAQLHLPPVSEYTQRKIFVSNVGADIDPKKLLQFFARYGEIEEGPLGLDK 276
Query: 475 ----PKGYALFVYKTVEGAMRALEEPNKNFEGIILQCERANDRSKGAHHYNTAAPLNAAP 308
PKG+ALFVYKT+E A +ALEEP+K+F+G++L C++A D K A
Sbjct: 277 VTGKPKGFALFVYKTIESAKKALEEPHKHFDGVVLHCQKAIDGPKPNKLGGAGGFFGAGA 336
Query: 307 NKGNLNGPGY 278
+ G PGY
Sbjct: 337 SSGGKGFPGY 346
>ref|XP_006575610.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like
isoform X1 [Glycine max]
gi|571442021|ref|XP_006575611.1| PREDICTED: nuclear
polyadenylated RNA-binding protein 4-like isoform X2
[Glycine max]
Length = 496
Score = 72.0 bits (175), Expect = 2e-10
Identities = 41/102 (40%), Positives = 53/102 (51%), Gaps = 12/102 (11%)
Frame = -1
Query: 604 PGPSISFTTYQDNVARKIYVGNVHADVDGGXXXXXXXXXXXXX------------PKGYA 461
P P S T + RKI+V NV A++D PKG+A
Sbjct: 252 PAPPPSVTPVSEYTQRKIFVSNVSAEIDPQKLLEFFKQFGEVEDGPLGLDKNTGKPKGFA 311
Query: 460 LFVYKTVEGAMRALEEPNKNFEGIILQCERANDRSKGAHHYN 335
LFVYK+VE A +ALEEPNKN+EG L C++A D KG+ Y+
Sbjct: 312 LFVYKSVESAKKALEEPNKNYEGHTLYCQKAVDGPKGSKGYH 353
>ref|XP_003545465.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like
isoform X1 [Glycine max]
gi|571507084|ref|XP_006595801.1| PREDICTED: nuclear
polyadenylated RNA-binding protein 4-like isoform X2
[Glycine max] gi|571507091|ref|XP_006595802.1|
PREDICTED: nuclear polyadenylated RNA-binding protein
4-like isoform X3 [Glycine max]
Length = 494
Score = 70.5 bits (171), Expect = 4e-10
Identities = 42/109 (38%), Positives = 56/109 (51%), Gaps = 15/109 (13%)
Frame = -1
Query: 604 PGPSISFTTYQDNVARKIYVGNVHADVDGGXXXXXXXXXXXXX------------PKGYA 461
P P + T + RKI+V NV+A++D PKG+A
Sbjct: 251 PAPPPNVTPVSEYTQRKIFVSNVNAEIDPQKLLEFFKQFGEVEDGPLGLDKNTGKPKGFA 310
Query: 460 LFVYKTVEGAMRALEEPNKNFEGIILQCERAND---RSKGAHHYNTAAP 323
LFVYK+VE A +ALEEP+KN+EG L C++A D SKG HH + P
Sbjct: 311 LFVYKSVESAKKALEEPHKNYEGHTLYCQKAVDGPKGSKGYHHQQHSHP 359
>ref|XP_002879905.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata] gi|297325744|gb|EFH56164.1| RNA recognition
motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 447
Score = 70.1 bits (170), Expect = 6e-10
Identities = 50/147 (34%), Positives = 68/147 (46%), Gaps = 30/147 (20%)
Frame = -1
Query: 571 DNVARKIYVGNVHADVDGGXXXXXXXXXXXXX------------PKGYALFVYKTVEGAM 428
+NV RKIYV NV AD+D PKG+ALFVY+++E A
Sbjct: 218 ENVQRKIYVSNVSADLDPQKLLEFFSRFGEIEEGPLGLDKVTGRPKGFALFVYRSLESAK 277
Query: 427 RALEEPNKNFEGIILQCERANDRSK---------GAHHYNTAAPLNAAPNKGNLNGPGYT 275
+ALEEP+K FEG +L C +AND K +H+ N+ N + G G G+
Sbjct: 278 KALEEPHKTFEGHVLHCHKANDGPKQVKQHQHNHNSHNQNSRYQRNDSNGYGAPGGHGHF 337
Query: 274 MPVSD---------IGLAQQAALMGQG 221
+ ++ IG A A L QG
Sbjct: 338 IAGNNQAAQAFNPAIGQALTALLASQG 364
>ref|NP_181639.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|145331087|ref|NP_001078035.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
gi|75318681|sp|O80678.1|UBA2B_ARATH RecName:
Full=UBP1-associated protein 2B
gi|16612302|gb|AAL27512.1|AF439844_1 At2g41060/T3K9.17
[Arabidopsis thaliana] gi|3402711|gb|AAD12005.1|
putative RNA-binding protein [Arabidopsis thaliana]
gi|22137136|gb|AAM91413.1| At2g41060/T3K9.17
[Arabidopsis thaliana] gi|110742573|dbj|BAE99200.1|
putative RNA-binding protein [Arabidopsis thaliana]
gi|330254826|gb|AEC09920.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
gi|330254827|gb|AEC09921.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 451
Score = 69.7 bits (169), Expect = 7e-10
Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 15/112 (13%)
Frame = -1
Query: 571 DNVARKIYVGNVHADVDGGXXXXXXXXXXXXX------------PKGYALFVYKTVEGAM 428
+NV RKIYV NV AD+D PKG+ALFVY+++E A
Sbjct: 223 ENVQRKIYVSNVSADIDPQKLLEFFSRFGEIEEGPLGLDKATGRPKGFALFVYRSLESAK 282
Query: 427 RALEEPNKNFEGIILQCERAND---RSKGAHHYNTAAPLNAAPNKGNLNGPG 281
+ALEEP+K FEG +L C +AND + K H + + N+ + + NG G
Sbjct: 283 KALEEPHKTFEGHVLHCHKANDGPKQVKQHQHNHNSHNQNSRYQRNDNNGYG 334
>gb|EOY34317.1| RNA-binding family protein, putative isoform 1 [Theobroma cacao]
gi|508787062|gb|EOY34318.1| RNA-binding family protein,
putative isoform 1 [Theobroma cacao]
gi|508787063|gb|EOY34319.1| RNA-binding family protein,
putative isoform 1 [Theobroma cacao]
gi|508787064|gb|EOY34320.1| RNA-binding family protein,
putative isoform 1 [Theobroma cacao]
Length = 500
Score = 69.3 bits (168), Expect = 1e-09
Identities = 44/120 (36%), Positives = 55/120 (45%), Gaps = 12/120 (10%)
Frame = -1
Query: 604 PGPSISFTTYQDNVARKIYVGNVHADVDGGXXXXXXXXXXXXX------------PKGYA 461
P P S + RKI+V NV A+VD PKG+A
Sbjct: 241 PAPPPSAPPVSEYTQRKIFVSNVSAEVDPEKLLEYFRQYGEIEEGPLGLDKQSGKPKGFA 300
Query: 460 LFVYKTVEGAMRALEEPNKNFEGIILQCERANDRSKGAHHYNTAAPLNAAPNKGNLNGPG 281
LFVY+++E A RALEEP+KNFEG +L C++A D K PNKG G G
Sbjct: 301 LFVYRSIESARRALEEPHKNFEGHVLHCQKAIDGPK--------------PNKGGYGGSG 346
>gb|EXC19709.1| Uncharacterized RNA-binding protein [Morus notabilis]
Length = 483
Score = 68.9 bits (167), Expect = 1e-09
Identities = 53/143 (37%), Positives = 64/143 (44%), Gaps = 21/143 (14%)
Frame = -1
Query: 601 GPSISFTTYQDNVARKIYVGNVHADVDGGXXXXXXXXXXXXX------------PKGYAL 458
GPS +T RKIYV NV A++D PKG+ L
Sbjct: 246 GPSSEYTQ------RKIYVSNVGAELDPQKLTVFFSKYGEIEEGPLGLDKATGRPKGFCL 299
Query: 457 FVYKTVEGAMRALEEPNKNFEGIILQCERANDRSK-GAHHYNTAAPLNAAPNKGNLNG-- 287
FVYKTV+GA +AL EP+KNFEG IL C++A D K G H+N N G
Sbjct: 300 FVYKTVDGARKALAEPHKNFEGNILHCQKAIDGPKPGKSHHNQHHHHNQRNKNPGFGGAQ 359
Query: 286 -----PGYTM-PVSDIGLAQQAA 236
PG+ M P G Q AA
Sbjct: 360 PGPAVPGHLMAPAGPGGFTQGAA 382
>ref|XP_006294217.1| hypothetical protein CARUB_v10023213mg [Capsella rubella]
gi|482562925|gb|EOA27115.1| hypothetical protein
CARUB_v10023213mg [Capsella rubella]
Length = 448
Score = 68.9 bits (167), Expect = 1e-09
Identities = 40/100 (40%), Positives = 50/100 (50%), Gaps = 20/100 (20%)
Frame = -1
Query: 571 DNVARKIYVGNVHADVDGGXXXXXXXXXXXXX------------PKGYALFVYKTVEGAM 428
+NV RKIYV NV AD+D PKG+ LFVY++ E A
Sbjct: 216 ENVQRKIYVSNVSADLDPHKLLEFFSRFGEIEEGPLGLDKATGKPKGFTLFVYRSAESAK 275
Query: 427 RALEEPNKNFEGIILQCERANDRSKGA--------HHYNT 332
+ALEEP+K FEG +L C +AND K HHYN+
Sbjct: 276 KALEEPHKTFEGHVLHCHKANDGPKQGKQHQQHHHHHYNS 315
>ref|XP_004967762.1| PREDICTED: nuclear localization sequence-binding protein-like
[Setaria italica]
Length = 465
Score = 68.6 bits (166), Expect = 2e-09
Identities = 43/126 (34%), Positives = 59/126 (46%), Gaps = 15/126 (11%)
Frame = -1
Query: 610 SNPGPS---ISFTTYQDNVARKIYVGNVHADVDGGXXXXXXXXXXXXX------------ 476
SNP P+ + + RKI+V NV AD+D
Sbjct: 225 SNPVPAPAQLQLPPVSEYTQRKIFVSNVGADIDPQKLFLFFARYGEIEEGPLGLDKVTGK 284
Query: 475 PKGYALFVYKTVEGAMRALEEPNKNFEGIILQCERANDRSKGAHHYNTAAPLNAAPNKGN 296
PKG+ALFVYKT+E A +ALEEP+K+FEG++L C++A D K A + G+
Sbjct: 285 PKGFALFVYKTIESAKKALEEPHKHFEGVVLHCQKAIDGPKSNKIGGHGGFYGAGASSGS 344
Query: 295 LNGPGY 278
GY
Sbjct: 345 KGVAGY 350
>ref|XP_004148449.1| PREDICTED: uncharacterized protein LOC101211535 [Cucumis sativus]
gi|449503048|ref|XP_004161816.1| PREDICTED:
uncharacterized protein LOC101228786 [Cucumis sativus]
Length = 500
Score = 68.6 bits (166), Expect = 2e-09
Identities = 54/149 (36%), Positives = 66/149 (44%), Gaps = 36/149 (24%)
Frame = -1
Query: 559 RKIYVGNVHADVDGGXXXXXXXXXXXXX------------PKGYALFVYKTVEGAMRALE 416
RKIYV NV ADVD PKG+ LFVYK++E A +ALE
Sbjct: 267 RKIYVSNVGADVDPQKLLAFFSQFGEVDEGPLGLDKMTGKPKGFCLFVYKSIESAKKALE 326
Query: 415 EPNKNFEGIILQCERANDRSKGA----HHYNTAAPL--NAAPN--KGNLNGPGYTMPVSD 260
EP+KNFEG +L C++A D K H+ AP N PN G +G G+ M +
Sbjct: 327 EPHKNFEGHVLHCQKAIDGPKPGKAQHQHHTPNAPFQRNKNPNYTGGAASGSGHLMAPAG 386
Query: 259 ----------------IGLAQQAALMGQG 221
IG A A L GQG
Sbjct: 387 PGVGYNQGPPQGLNPAIGQALTALLAGQG 415