BLASTX nr result

ID: Zingiber23_contig00015556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00015556
         (524 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25599.3| unnamed protein product [Vitis vinifera]               68   1e-09
ref|XP_002265494.1| PREDICTED: homeobox protein knotted-1-like 3...    68   1e-09
dbj|BAL46506.1| Knotted1-like homeobox protein [Diospyros kaki]        58   1e-06

>emb|CBI25599.3| unnamed protein product [Vitis vinifera]
          Length = 413

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 43/132 (32%), Positives = 57/132 (43%), Gaps = 7/132 (5%)
 Frame = -1

Query: 395 MAFHNNLAHELAMPQYAEQQLAAGGPAMLRTAMGQLGTGRPXXXXXXXXXXXXXXXGKDF 216
           MAFHN L+H++A+  + +  L      +      QLG                       
Sbjct: 1   MAFHNQLSHDMALQHFTDSHLTENTAVLRGILPEQLGQSSS------------------- 41

Query: 215 DRLMENAGKPAL-------AGGSGPTWLNSAILQQHGHGHYGDGSFLHLQTAPNASASPG 57
               + AGKP          GG GPTWLN+AIL+Q     Y DGSFLHLQT  ++++SP 
Sbjct: 42  ----DGAGKPPSHQQLGGGGGGGGPTWLNNAILRQQSQ--YADGSFLHLQTNSDSTSSPA 95

Query: 56  GRGVGDGQWFPR 21
                  QW  R
Sbjct: 96  TATTTTNQWLSR 107


>ref|XP_002265494.1| PREDICTED: homeobox protein knotted-1-like 3 [Vitis vinifera]
          Length = 430

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 43/132 (32%), Positives = 57/132 (43%), Gaps = 7/132 (5%)
 Frame = -1

Query: 395 MAFHNNLAHELAMPQYAEQQLAAGGPAMLRTAMGQLGTGRPXXXXXXXXXXXXXXXGKDF 216
           MAFHN L+H++A+  + +  L      +      QLG                       
Sbjct: 1   MAFHNQLSHDMALQHFTDSHLTENTAVLRGILPEQLGQSSS------------------- 41

Query: 215 DRLMENAGKPAL-------AGGSGPTWLNSAILQQHGHGHYGDGSFLHLQTAPNASASPG 57
               + AGKP          GG GPTWLN+AIL+Q     Y DGSFLHLQT  ++++SP 
Sbjct: 42  ----DGAGKPPSHQQLGGGGGGGGPTWLNNAILRQQSQ--YADGSFLHLQTNSDSTSSPA 95

Query: 56  GRGVGDGQWFPR 21
                  QW  R
Sbjct: 96  TATTTTNQWLSR 107


>dbj|BAL46506.1| Knotted1-like homeobox protein [Diospyros kaki]
          Length = 438

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 41/125 (32%), Positives = 55/125 (44%)
 Frame = -1

Query: 395 MAFHNNLAHELAMPQYAEQQLAAGGPAMLRTAMGQLGTGRPXXXXXXXXXXXXXXXGKDF 216
           MAF N+L+ E+A+  +  Q L      + R    QLG   P                   
Sbjct: 1   MAFPNHLSQEMALQHFTGQHLGENTSVLRRYLPEQLGQSSPDGAGKEHKEIQRLILESAA 60

Query: 215 DRLMENAGKPALAGGSGPTWLNSAILQQHGHGHYGDGSFLHLQTAPNASASPGGRGVGDG 36
            +  E+  +P   G  GPTWLNSAIL+QHG       +FL+LQTA +A+ S         
Sbjct: 61  GKAAEHHHQPQQVG-VGPTWLNSAILRQHGQ------NFLNLQTATDATTSQ-----ASN 108

Query: 35  QWFPR 21
           QW  R
Sbjct: 109 QWLSR 113


Top