BLASTX nr result

ID: Zingiber23_contig00015454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00015454
         (217 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS62826.1| E3 ubiquitin-protein ligase UPL7 [Triticum urartu]      58   1e-06
gb|EMT10907.1| E3 ubiquitin-protein ligase UPL7 [Aegilops tauschii]    55   7e-06

>gb|EMS62826.1| E3 ubiquitin-protein ligase UPL7 [Triticum urartu]
          Length = 1229

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 30/61 (49%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
 Frame = +2

Query: 2   TSEDKLFDEMLMLDQSDFATKE---IPPLGKALSNIINLAIEDNDFGSYGLFIQGLDCKL 172
           TS+DK+F+E+  L+QS+ ++ +   IP  G AL N+I LA E +D  + G FIQGLDC L
Sbjct: 395 TSKDKIFEEISKLEQSEVSSVDNSTIPYCGWALGNLITLATEHDDLSNLGCFIQGLDCCL 454

Query: 173 Y 175
           Y
Sbjct: 455 Y 455


>gb|EMT10907.1| E3 ubiquitin-protein ligase UPL7 [Aegilops tauschii]
          Length = 1337

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
 Frame = +2

Query: 5   SEDKLFDEMLMLDQSDFATKE---IPPLGKALSNIINLAIEDNDFGSYGLFIQGLDCKLY 175
           S+DK+F+E+  L+QS+ +  +   IP  G AL N+I LA E +D  + G FIQGLDC LY
Sbjct: 504 SKDKIFEEISKLEQSEVSNVDNSTIPYCGWALGNLITLATEHDDLSNSGCFIQGLDCCLY 563


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