BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00015417
         (741 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535692.1| conserved hypothetical protein [Ricinus comm...    92   2e-16
ref|NP_001066267.1| Os12g0170100 [Oryza sativa Japonica Group] g...    85   3e-14
gb|EOY08858.1| Pentatricopeptide repeat-containing protein isofo...    83   8e-14
gb|EOY08857.1| Pentatricopeptide repeat-containing protein isofo...    83   8e-14
ref|XP_003567340.1| PREDICTED: pentatricopeptide repeat-containi...    82   2e-13
gb|EAY82409.1| hypothetical protein OsI_37623 [Oryza sativa Indi...    81   3e-13
ref|XP_006430551.1| hypothetical protein CICLE_v10011296mg [Citr...    80   7e-13
ref|XP_006836265.1| hypothetical protein AMTR_s00101p00144290 [A...    80   7e-13
dbj|BAD81093.1| putative DNA-binding protein [Oryza sativa Japon...    80   9e-13
ref|XP_006644067.1| PREDICTED: pentatricopeptide repeat-containi...    79   2e-12
gb|AFW79512.1| DNA-binding protein [Zea mays]                          78   3e-12
ref|XP_003518031.1| PREDICTED: pentatricopeptide repeat-containi...    78   3e-12
ref|NP_001147602.1| DNA-binding protein [Zea mays] gi|195612448|...    78   3e-12
ref|XP_002322619.2| hypothetical protein POPTR_0016s03540g [Popu...    78   3e-12
ref|XP_004303594.1| PREDICTED: pentatricopeptide repeat-containi...    77   5e-12
ref|XP_002889301.1| hypothetical protein ARALYDRAFT_477224 [Arab...    77   5e-12
gb|EAY73527.1| hypothetical protein OsI_01409 [Oryza sativa Indi...    77   5e-12
ref|XP_006482077.1| PREDICTED: pentatricopeptide repeat-containi...    76   1e-11
gb|EMJ05620.1| hypothetical protein PRUPE_ppa1027225mg [Prunus p...    76   1e-11
ref|NP_178143.1| pentatricopeptide repeat-containing protein [Ar...    76   1e-11

>ref|XP_002535692.1| conserved hypothetical protein [Ricinus communis]
           gi|223522266|gb|EEF26691.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 194

 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 66/174 (37%), Positives = 91/174 (52%), Gaps = 12/174 (6%)
 Frame = -2

Query: 488 YLECSNITSSLVQLKS-----YSRGPISRKPFLWTRYLSSQAGANSSDRENDLEDGFSSM 324
           +LE +   S  +Q+ S     Y    +  K  +  R LSS+AG+ SS  E+DLEDGFS +
Sbjct: 22  HLEGNGAVSKPLQIASEKCLFYHSTNVCSKFHIDRRSLSSKAGSESSKSEDDLEDGFSEL 81

Query: 323 EVPPGSTDSVDGS----GNEDDVLXXXXXXXXXXXE---NPLDLGDDEANKGGVKRGPRL 165
           E P  + +++D S    GNED++                N L+L D EA  G      + 
Sbjct: 82  ETP-ANANTIDESNAVGGNEDELFSEPELDDDDGDSGAKNALELSDTEAGSGKKTTVRKR 140

Query: 164 SHYQLFKTITGTPRKSLISALDKYVEEGKPLGRGEISFALRILKRRRLYPMALQ 3
              +LFKTI   P   L   L+K+VEEGK LGR EIS A+  L++RR+Y  ALQ
Sbjct: 141 VPSELFKTIIAAPNVPLSVVLNKWVEEGKTLGRPEISLAMLNLRKRRMYGRALQ 194


>ref|NP_001066267.1| Os12g0170100 [Oryza sativa Japonica Group]
           gi|77553759|gb|ABA96555.1| DNA-binding protein,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113648774|dbj|BAF29286.1| Os12g0170100 [Oryza sativa
           Japonica Group] gi|125578643|gb|EAZ19789.1| hypothetical
           protein OsJ_35368 [Oryza sativa Japonica Group]
           gi|215767656|dbj|BAG99884.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 611

 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 57/172 (33%), Positives = 91/172 (52%), Gaps = 5/172 (2%)
 Frame = -2

Query: 503 KSNCIYLECSNITSSLVQLKSYSRGPISRKPFLWTRYLSSQAGANSSDRENDLEDGFSSM 324
           + +C  L+C +    LV   S+S G      F+W+R  SSQAGA+S D++++LE+GFS +
Sbjct: 43  EGDCQKLDCCHQPKPLVCQPSFSSGR-----FMWSRGFSSQAGASSGDKQDELEEGFSDL 97

Query: 323 EVPPGSTD-----SVDGSGNEDDVLXXXXXXXXXXXENPLDLGDDEANKGGVKRGPRLSH 159
           EVPP +       + D S +ED +             + + L + EA+    +   + S 
Sbjct: 98  EVPPEAHKKDLDLTSDESSDEDTI-------------DAIGLSEVEAD-AKPEEPIKKSQ 143

Query: 158 YQLFKTITGTPRKSLISALDKYVEEGKPLGRGEISFALRILKRRRLYPMALQ 3
             L K +  +PR  +  AL K++ +G  L R E+ + L IL+RR+LY  ALQ
Sbjct: 144 STLLKALLESPRVDVAGALKKWLNDGNTLDRSELFYVLLILRRRKLYIKALQ 195


>gb|EOY08858.1| Pentatricopeptide repeat-containing protein isoform 2, partial
           [Theobroma cacao]
          Length = 621

 Score = 83.2 bits (204), Expect = 8e-14
 Identities = 52/138 (37%), Positives = 70/138 (50%), Gaps = 8/138 (5%)
 Frame = -2

Query: 392 LSSQAGANSSDRENDLEDGFSSMEVPP--------GSTDSVDGSGNEDDVLXXXXXXXXX 237
           LSSQAGA SS  E++LEDGFS +E P          + D  +     D  L         
Sbjct: 69  LSSQAGAESSGEEDELEDGFSELETPATAEKKENCSAQDKAEDGLISDPELSGDEEDIEE 128

Query: 236 XXENPLDLGDDEANKGGVKRGPRLSHYQLFKTITGTPRKSLISALDKYVEEGKPLGRGEI 57
             +N L+L +DE +    K   R    +LFK +   P  S+   LDK++EEGK   R EI
Sbjct: 129 TAKNELELSEDETDLSDKKSSTRRIVSELFKAVIAAPGLSVHKVLDKWLEEGKAFNRTEI 188

Query: 56  SFALRILKRRRLYPMALQ 3
           S A+  L++RR+Y  ALQ
Sbjct: 189 SVAMLNLRKRRMYGRALQ 206


>gb|EOY08857.1| Pentatricopeptide repeat-containing protein isoform 1 [Theobroma
           cacao]
          Length = 623

 Score = 83.2 bits (204), Expect = 8e-14
 Identities = 52/138 (37%), Positives = 70/138 (50%), Gaps = 8/138 (5%)
 Frame = -2

Query: 392 LSSQAGANSSDRENDLEDGFSSMEVPP--------GSTDSVDGSGNEDDVLXXXXXXXXX 237
           LSSQAGA SS  E++LEDGFS +E P          + D  +     D  L         
Sbjct: 71  LSSQAGAESSGEEDELEDGFSELETPATAEKKENCSAQDKAEDGLISDPELSGDEEDIEE 130

Query: 236 XXENPLDLGDDEANKGGVKRGPRLSHYQLFKTITGTPRKSLISALDKYVEEGKPLGRGEI 57
             +N L+L +DE +    K   R    +LFK +   P  S+   LDK++EEGK   R EI
Sbjct: 131 TAKNELELSEDETDLSDKKSSTRRIVSELFKAVIAAPGLSVHKVLDKWLEEGKAFNRTEI 190

Query: 56  SFALRILKRRRLYPMALQ 3
           S A+  L++RR+Y  ALQ
Sbjct: 191 SVAMLNLRKRRMYGRALQ 208


>ref|XP_003567340.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like [Brachypodium distachyon]
          Length = 612

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 58/184 (31%), Positives = 83/184 (45%), Gaps = 2/184 (1%)
 Frame = -2

Query: 548 VLSKSHATELRHGDKKSNCIYLECSNITSSLVQLKSYSRGPISRKPFLWTRYLSSQAGAN 369
           VL  +      H D+   C+   C       V   S+S G      F+W R  SSQAGAN
Sbjct: 29  VLLSADTKNAEHCDR--GCLKSCCCRQPKPSVCQSSFSSGS-----FMWNRTFSSQAGAN 81

Query: 368 SSDRENDLEDGFSSMEVPPGSTDSVDGSGNEDDVLXXXXXXXXXXXENPLDL--GDDEAN 195
           S D+E DLEDGFS +EVPP          ++ D              + +DL   DD  +
Sbjct: 82  SGDKEEDLEDGFSDLEVPP--------EADKKDAELTSEESSDEDAADAVDLLEVDDADS 133

Query: 194 KGGVKRGPRLSHYQLFKTITGTPRKSLISALDKYVEEGKPLGRGEISFALRILKRRRLYP 15
           K   +   ++S   L K +   P   +   L K+V +G  + R ++ FA+  L+RRR + 
Sbjct: 134 KSEKEPKKKISQCPLLKVMLEAPWNDVSGTLKKWVNDGNTVDRSDVFFAVLNLRRRRFFS 193

Query: 14  MALQ 3
            ALQ
Sbjct: 194 KALQ 197


>gb|EAY82409.1| hypothetical protein OsI_37623 [Oryza sativa Indica Group]
          Length = 611

 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 55/172 (31%), Positives = 90/172 (52%), Gaps = 5/172 (2%)
 Frame = -2

Query: 503 KSNCIYLECSNITSSLVQLKSYSRGPISRKPFLWTRYLSSQAGANSSDRENDLEDGFSSM 324
           + +C  L+C +    LV   S+S G      F+W+R  SSQAGA+S D++++LE+GFS +
Sbjct: 43  EGDCQKLDCCHQPKPLVCQPSFSSGR-----FMWSRGFSSQAGASSGDKQDELEEGFSDL 97

Query: 323 EVPPGSTD-----SVDGSGNEDDVLXXXXXXXXXXXENPLDLGDDEANKGGVKRGPRLSH 159
           +VPP +       + D S +ED +             + + L + EA+    +   + S 
Sbjct: 98  DVPPEAHKKDLDLTSDESSDEDTI-------------DAIGLSEVEAD-AKPEEPIKKSQ 143

Query: 158 YQLFKTITGTPRKSLISALDKYVEEGKPLGRGEISFALRILKRRRLYPMALQ 3
             L K +  +PR  +  AL K++ +G  L R E+ + L  L+RR+LY  ALQ
Sbjct: 144 STLLKALLESPRVDVAGALKKWLNDGNTLDRSELFYVLLSLRRRKLYIKALQ 195


>ref|XP_006430551.1| hypothetical protein CICLE_v10011296mg [Citrus clementina]
           gi|557532608|gb|ESR43791.1| hypothetical protein
           CICLE_v10011296mg [Citrus clementina]
          Length = 623

 Score = 80.1 bits (196), Expect = 7e-13
 Identities = 54/137 (39%), Positives = 70/137 (51%), Gaps = 5/137 (3%)
 Frame = -2

Query: 398 RYLSSQAGANSSDRENDLEDGFSSMEVPPGSTDSVDGSGNEDD-----VLXXXXXXXXXX 234
           R LSSQAGA SS  E+DLE+GFS +E P  + D+V  S  ED+     +           
Sbjct: 73  RGLSSQAGAESSGEEDDLEEGFSELETP-ATADAVQKSMAEDEKEYGLISESELSGDHDD 131

Query: 233 XENPLDLGDDEANKGGVKRGPRLSHYQLFKTITGTPRKSLISALDKYVEEGKPLGRGEIS 54
            EN L+L + E          +    +LFK I   P  S+ S L KY EEG  L R EI+
Sbjct: 132 IENDLELSETETEASRKTTPSKRKFSKLFKAIMDAPDISIHSTLTKYAEEGNDLSRAEIA 191

Query: 53  FALRILKRRRLYPMALQ 3
            A+  L+ RR+Y  ALQ
Sbjct: 192 LAMANLRTRRMYGKALQ 208


>ref|XP_006836265.1| hypothetical protein AMTR_s00101p00144290 [Amborella trichopoda]
           gi|548838765|gb|ERM99118.1| hypothetical protein
           AMTR_s00101p00144290 [Amborella trichopoda]
          Length = 97

 Score = 80.1 bits (196), Expect = 7e-13
 Identities = 45/82 (54%), Positives = 61/82 (74%), Gaps = 3/82 (3%)
 Frame = -2

Query: 737 MAKRQIPLLNRVLVEKIAPPYKTSAGILNSEKITKLNNGEVL-VGSVACDKNGNS--NSM 567
           MAKR IPLLNRVL+EKI PP KTSAGIL  EK TKLN+G+V+ VG    D+ GN+   S+
Sbjct: 1   MAKRLIPLLNRVLIEKIVPPTKTSAGILLPEKTTKLNSGKVVAVGPGLRDREGNTVPVSL 60

Query: 566 KNGDSLVLSKSHATELRHGDKK 501
           K GD+++L +   T+++ G+K+
Sbjct: 61  KEGDTVLLPEYGGTDVKLGEKE 82


>dbj|BAD81093.1| putative DNA-binding protein [Oryza sativa Japonica Group]
           gi|56784204|dbj|BAD81589.1| putative DNA-binding protein
           [Oryza sativa Japonica Group]
           gi|125569936|gb|EAZ11451.1| hypothetical protein
           OsJ_01319 [Oryza sativa Japonica Group]
          Length = 611

 Score = 79.7 bits (195), Expect = 9e-13
 Identities = 54/170 (31%), Positives = 87/170 (51%), Gaps = 5/170 (2%)
 Frame = -2

Query: 497 NCIYLECSNITSSLVQLKSYSRGPISRKPFLWTRYLSSQAGANSSDRENDLEDGFSSMEV 318
           +C  L+C +    LV   S+S G      F+W+R  SSQAGA+S D++++LE+GFS +EV
Sbjct: 45  DCQKLDCCHQPKPLVCQSSFSSGR-----FMWSRVFSSQAGASSGDKQDELEEGFSDLEV 99

Query: 317 PPGSTD-----SVDGSGNEDDVLXXXXXXXXXXXENPLDLGDDEANKGGVKRGPRLSHYQ 153
           PP +       + D S +ED +             + + L   EA+    +   + S   
Sbjct: 100 PPEADKKDLDLTSDESSDEDTI-------------DAIGLSQVEAD-AKPEEPIKKSQST 145

Query: 152 LFKTITGTPRKSLISALDKYVEEGKPLGRGEISFALRILKRRRLYPMALQ 3
           L K +  +PR  +  A  K++ +G  L R E+ + L  L++R+LY  ALQ
Sbjct: 146 LLKALLVSPRVDVAGATKKWLNDGNTLERSELFYVLLSLRKRKLYTKALQ 195


>ref|XP_006644067.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like [Oryza brachyantha]
          Length = 594

 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 51/172 (29%), Positives = 87/172 (50%), Gaps = 5/172 (2%)
 Frame = -2

Query: 503 KSNCIYLECSNITSSLVQLKSYSRGPISRKPFLWTRYLSSQAGANSSDRENDLEDGFSSM 324
           + +C  L+C +  + LV        P S   F+W+R  SS+AGA+S D++++LE+GFS +
Sbjct: 25  EGDCQKLDCCHQPNPLV-----FHSPFSSGWFMWSRDFSSEAGASSGDKQDELEEGFSDL 79

Query: 323 EVPPGSTD-----SVDGSGNEDDVLXXXXXXXXXXXENPLDLGDDEANKGGVKRGPRLSH 159
           EVPP +       + D S +ED +             + + L + EA+    +   + S 
Sbjct: 80  EVPPQADKKDLGLTSDESSDEDTI-------------DAIGLSEVEADAKPEEPIKKASQ 126

Query: 158 YQLFKTITGTPRKSLISALDKYVEEGKPLGRGEISFALRILKRRRLYPMALQ 3
             L K +  +PR  +  A  K++  G  L R E+ + +  L++R+LY  ALQ
Sbjct: 127 STLLKALLESPRTDVAGAAKKWLNSGNTLERSELFYVILCLRKRKLYRKALQ 178


>gb|AFW79512.1| DNA-binding protein [Zea mays]
          Length = 622

 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 56/177 (31%), Positives = 84/177 (47%), Gaps = 10/177 (5%)
 Frame = -2

Query: 503 KSNCIYLECSNITSSLVQLKSYSRGPISRKPFLWTRYLSSQAGANSSDRENDLEDGFSSM 324
           +++C  + C +   S     S+S G      F  +R  SSQ GANS D+ ++LEDGFS +
Sbjct: 43  EADCQKMCCCHKPRSPAFQLSFSSGQ-----FACSRGFSSQPGANSGDKADELEDGFSDL 97

Query: 323 EVPPGSTDSVDGSGNEDDVLXXXXXXXXXXXENPLDLGDDEANKGGVKRGPR-------- 168
           EVPP +  + DG  +ED               +   L D +A+    K   R        
Sbjct: 98  EVPPAAVQNDDGLASEDS--------SDEDAADEFGLPDVDADAKPEKEHTRRLSDSILL 149

Query: 167 --LSHYQLFKTITGTPRKSLISALDKYVEEGKPLGRGEISFALRILKRRRLYPMALQ 3
             LS   L KT+   PR  + SAL+K+ ++G    RGE+ + L  L++R  Y  AL+
Sbjct: 150 KTLSDSILLKTVLEAPRHQVTSALEKWAKDGNAFDRGELYYVLLNLRKRHWYSKALE 206


>ref|XP_003518031.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like [Glycine max]
          Length = 609

 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 56/144 (38%), Positives = 79/144 (54%), Gaps = 1/144 (0%)
 Frame = -2

Query: 431 GPISRKPFLWTRYLSSQAGANSSD-RENDLEDGFSSMEVPPGSTDSVDGSGNEDDVLXXX 255
           G +S K  + TR LSSQAGA+S+   ++DLE G S +E+  GS D  D   +++D     
Sbjct: 62  GRVSLKFAVGTRELSSQAGASSTKVDDDDLEGGLSELEIQ-GSNDESDADLSDED----- 115

Query: 254 XXXXXXXXENPLDLGDDEANKGGVKRGPRLSHYQLFKTITGTPRKSLISALDKYVEEGKP 75
                    + +DL D +  K   K   R +  +LFK I   P  S+ SAL+K+VE GK 
Sbjct: 116 --EDGGKPVDEMDLSDADPTKK--KSQGRRTQSELFKAIANAPGLSVDSALNKWVEHGKE 171

Query: 74  LGRGEISFALRILKRRRLYPMALQ 3
           L R EI  A+R L+RR++Y  A Q
Sbjct: 172 LSRKEILLAVRELRRRKMYGRAFQ 195


>ref|NP_001147602.1| DNA-binding protein [Zea mays] gi|195612448|gb|ACG28054.1|
           DNA-binding protein [Zea mays]
          Length = 622

 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 56/177 (31%), Positives = 84/177 (47%), Gaps = 10/177 (5%)
 Frame = -2

Query: 503 KSNCIYLECSNITSSLVQLKSYSRGPISRKPFLWTRYLSSQAGANSSDRENDLEDGFSSM 324
           +++C  + C +   S     S+S G      F  +R  SSQ GANS D+ ++LEDGFS +
Sbjct: 43  EADCQKMCCCHKPRSPAFQLSFSSGQ-----FACSRGFSSQPGANSGDKADELEDGFSDL 97

Query: 323 EVPPGSTDSVDGSGNEDDVLXXXXXXXXXXXENPLDLGDDEANKGGVKRGPR-------- 168
           EVPP +  + DG  +ED               +   L D +A+    K   R        
Sbjct: 98  EVPPAAVQNDDGLASEDS--------SDEDAADEFGLPDVDADAKPEKEHTRRLSDSILL 149

Query: 167 --LSHYQLFKTITGTPRKSLISALDKYVEEGKPLGRGEISFALRILKRRRLYPMALQ 3
             LS   L KT+   PR  + SAL+K+ ++G    RGE+ + L  L++R  Y  AL+
Sbjct: 150 KTLSDSILLKTVLEAPRHQVTSALEKWAKDGNAFDRGELYYVLLNLRKRHWYSKALE 206


>ref|XP_002322619.2| hypothetical protein POPTR_0016s03540g [Populus trichocarpa]
           gi|550320743|gb|EEF04380.2| hypothetical protein
           POPTR_0016s03540g [Populus trichocarpa]
          Length = 618

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 53/149 (35%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
 Frame = -2

Query: 440 YSRGPISRKPFLWTRYLSSQAGANSSDRENDLEDGFSSMEVPPGSTDSVDGSG---NEDD 270
           Y    I  K +L  R  +SQAGA SS+ + DLED FS +E P  + +SV       +E +
Sbjct: 55  YHSTNIGSKFYLEKRGFASQAGAESSESDEDLEDEFSELETPISANESVVNVVQLISEPE 114

Query: 269 VLXXXXXXXXXXXENPLDLGDDEANKGGVKRGPRLSHYQLFKTITGTPRKSLISALDKYV 90
           +            +N L+L D+E +    +   + +  +LFK I   P  S+ S LDK+V
Sbjct: 115 LSDDDTNDIGEPSQNALELSDNETDPAEKRLPRKKAPSELFKAIISAPGVSVHSVLDKWV 174

Query: 89  EEGKPLGRGEISFALRILKRRRLYPMALQ 3
            EG+ L + EIS A+  L++RRL+  ALQ
Sbjct: 175 AEGRDLDQLEISNAMFNLRKRRLFGRALQ 203


>ref|XP_004303594.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 625

 Score = 77.4 bits (189), Expect = 5e-12
 Identities = 55/138 (39%), Positives = 71/138 (51%), Gaps = 8/138 (5%)
 Frame = -2

Query: 392 LSSQAGANSSDRENDLEDGFSSMEVPPGSTDSVDGSG----NEDDVLXXXXXXXXXXXEN 225
           LSSQAG  SS  E+DLEDGFS +E PP + + V  S     NED+++             
Sbjct: 74  LSSQAGTESSGEEDDLEDGFSKLETPP-TAEVVQASNANDENEDELVSGPEISDDEADIE 132

Query: 224 P----LDLGDDEANKGGVKRGPRLSHYQLFKTITGTPRKSLISALDKYVEEGKPLGRGEI 57
           P    L+L + E +        R     LFK I   P  S+ SALDK+V+EG  L R EI
Sbjct: 133 PSQNELELSEIETDLNDKLSPRRRDVSALFKAILEFPGFSVHSALDKWVKEGNDLSRAEI 192

Query: 56  SFALRILKRRRLYPMALQ 3
           S     L+RRR++  ALQ
Sbjct: 193 SLTKINLRRRRMFGRALQ 210


>ref|XP_002889301.1| hypothetical protein ARALYDRAFT_477224 [Arabidopsis lyrata subsp.
           lyrata] gi|297335142|gb|EFH65560.1| hypothetical protein
           ARALYDRAFT_477224 [Arabidopsis lyrata subsp. lyrata]
          Length = 597

 Score = 77.4 bits (189), Expect = 5e-12
 Identities = 59/136 (43%), Positives = 76/136 (55%)
 Frame = -2

Query: 410 FLWTRYLSSQAGANSSDRENDLEDGFSSMEVPPGSTDSVDGSGNEDDVLXXXXXXXXXXX 231
           FL  R LSS AG  S   E+DLEDGFS +    GS+ S   + + DD             
Sbjct: 59  FLSKRALSSNAGTKSDQEEDDLEDGFSEL----GSSKSAQDTTSSDD--DEGKLSADEEE 112

Query: 230 ENPLDLGDDEANKGGVKRGPRLSHYQLFKTITGTPRKSLISALDKYVEEGKPLGRGEISF 51
           E  LDL DD +NK  V++ P     +LFKTI   P  S+ SALDK+VEEG  + R E++ 
Sbjct: 113 ELELDLIDD-SNKT-VEKKPS----ELFKTIVSAPGLSIGSALDKWVEEGNEITRVEVAK 166

Query: 50  ALRILKRRRLYPMALQ 3
           A+  L+RRR+Y  ALQ
Sbjct: 167 AMLQLRRRRMYGRALQ 182


>gb|EAY73527.1| hypothetical protein OsI_01409 [Oryza sativa Indica Group]
          Length = 611

 Score = 77.4 bits (189), Expect = 5e-12
 Identities = 53/170 (31%), Positives = 87/170 (51%), Gaps = 5/170 (2%)
 Frame = -2

Query: 497 NCIYLECSNITSSLVQLKSYSRGPISRKPFLWTRYLSSQAGANSSDRENDLEDGFSSMEV 318
           +C  L+C +    LV   S+S G      F+W+R  SSQA A+S D++++LE+GFS +EV
Sbjct: 45  DCQKLDCCHQPKPLVCQSSFSSGR-----FMWSRGFSSQASASSGDKQDELEEGFSDLEV 99

Query: 317 PPGSTD-----SVDGSGNEDDVLXXXXXXXXXXXENPLDLGDDEANKGGVKRGPRLSHYQ 153
           PP +       + D S +ED +             + + L + EA+    +   + S   
Sbjct: 100 PPEADKKDLDLTSDESSDEDTI-------------DAIGLSEVEAD-AKPEEPIKKSQST 145

Query: 152 LFKTITGTPRKSLISALDKYVEEGKPLGRGEISFALRILKRRRLYPMALQ 3
           L K +  +PR  +  A  K++ +G  L R E+ + L  L++R+LY  ALQ
Sbjct: 146 LLKALLVSPRVDVAGATKKWLNDGNTLERSELFYVLLSLRKRKLYTKALQ 195


>ref|XP_006482077.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like [Citrus sinensis]
          Length = 623

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 54/137 (39%), Positives = 69/137 (50%), Gaps = 5/137 (3%)
 Frame = -2

Query: 398 RYLSSQAGANSSDRENDLEDGFSSMEVPPGSTDSVDGSGNEDD-----VLXXXXXXXXXX 234
           R LSSQAGA SS  E+D E+GFS +E P  +TD+V  S  +D+     +           
Sbjct: 73  RGLSSQAGAESSGEEDDWEEGFSELETP-ATTDAVQKSIADDEKEDGLISESELSGDHDD 131

Query: 233 XENPLDLGDDEANKGGVKRGPRLSHYQLFKTITGTPRKSLISALDKYVEEGKPLGRGEIS 54
            EN L+L + E          +    +LFK I   P  S  S L  YVEEG  L R EIS
Sbjct: 132 IENDLELSETETEPSRKTTPSKRKLSKLFKAIMDAPDISNNSTLTTYVEEGNDLSRAEIS 191

Query: 53  FALRILKRRRLYPMALQ 3
            A+  L+ RR+Y  ALQ
Sbjct: 192 LAMANLRTRRMYGKALQ 208


>gb|EMJ05620.1| hypothetical protein PRUPE_ppa1027225mg [Prunus persica]
          Length = 611

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 57/170 (33%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
 Frame = -2

Query: 494 CIYLECSNITSSLVQLKS-YSRGPISRKPFLWTRYLSSQAGANSSDRENDLEDGFSSMEV 318
           C +  C ++    +  K  Y    +S    +  R  SSQAGA SS  ++DLEDGFS +E 
Sbjct: 32  CFHESCKSMPDGCLSSKRLYYTTQVSWNFSVDRRSFSSQAGAESSGEKDDLEDGFSELET 91

Query: 317 PPGSTDSVDGSGNEDDVLXXXXXXXXXXXENP----LDLGDDEANKGGVKRGPRLSHY-Q 153
            P    S + S +ED+++             P    L+L ++ A+    KR PR  +  +
Sbjct: 92  LP----SAEASQHEDELISEPELSEDEEEVEPSQHELELSENGADSIE-KRSPRKRNVSE 146

Query: 152 LFKTITGTPRKSLISALDKYVEEGKPLGRGEISFALRILKRRRLYPMALQ 3
           LFK I   P  S+  ALDK+V+ G  L R EIS A+   ++R+++  ALQ
Sbjct: 147 LFKAILAFPAFSVHGALDKWVKAGNDLNRAEISLAMFNFRKRQMFGRALQ 196


>ref|NP_178143.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|42572199|ref|NP_974190.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|145327755|ref|NP_001077853.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|75262222|sp|Q9C977.1|PP135_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g80270, mitochondrial; Flags: Precursor
           gi|12324975|gb|AAG52431.1|AC018848_2 hypothetical
           protein; 8785-10851 [Arabidopsis thaliana]
           gi|17064898|gb|AAL32603.1| Unknown protein [Arabidopsis
           thaliana] gi|20259918|gb|AAM13306.1| unknown protein
           [Arabidopsis thaliana] gi|332198258|gb|AEE36379.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana] gi|332198259|gb|AEE36380.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|332198260|gb|AEE36381.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 596

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 53/135 (39%), Positives = 73/135 (54%)
 Frame = -2

Query: 407 LWTRYLSSQAGANSSDRENDLEDGFSSMEVPPGSTDSVDGSGNEDDVLXXXXXXXXXXXE 228
           L  R LSS AG  S   E+DLEDGFS +E   GS      + +++D             E
Sbjct: 57  LSNRALSSSAGTKSDQEEDDLEDGFSELE---GSKSGQGSTSSDED---EGKLSADEEEE 110

Query: 227 NPLDLGDDEANKGGVKRGPRLSHYQLFKTITGTPRKSLISALDKYVEEGKPLGRGEISFA 48
             LDL + + ++  V++       +LFKTI   P  S+ SALDK+VEEG  + R EI+ A
Sbjct: 111 EELDLIETDVSRKTVEK----KQSELFKTIVSAPGLSIGSALDKWVEEGNEITRVEIAKA 166

Query: 47  LRILKRRRLYPMALQ 3
           +  L+RRR+Y  ALQ
Sbjct: 167 MLQLRRRRMYGRALQ 181