BLASTX nr result
ID: Zingiber23_contig00015333
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00015333
(355 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006657919.1| PREDICTED: pentatricopeptide repeat-containi... 120 1e-25
ref|XP_004958215.1| PREDICTED: pentatricopeptide repeat-containi... 118 9e-25
ref|NP_001060186.1| Os07g0599000 [Oryza sativa Japonica Group] g... 118 9e-25
gb|EAZ40545.1| hypothetical protein OsJ_25000 [Oryza sativa Japo... 118 9e-25
ref|XP_002460970.1| hypothetical protein SORBIDRAFT_02g038410 [S... 117 2e-24
ref|XP_003562755.1| PREDICTED: pentatricopeptide repeat-containi... 117 2e-24
tpg|DAA63474.1| TPA: hypothetical protein ZEAMMB73_429774 [Zea m... 116 3e-24
tpg|DAA63472.1| TPA: hypothetical protein ZEAMMB73_429774 [Zea m... 116 3e-24
tpg|DAA41331.1| TPA: hypothetical protein ZEAMMB73_952868 [Zea m... 116 3e-24
gb|EAZ04596.1| hypothetical protein OsI_26746 [Oryza sativa Indi... 116 3e-24
gb|EMT08169.1| hypothetical protein F775_26170 [Aegilops tauschii] 114 1e-23
dbj|BAK08122.1| predicted protein [Hordeum vulgare subsp. vulgare] 113 3e-23
dbj|BAJ85490.1| predicted protein [Hordeum vulgare subsp. vulgare] 110 2e-22
ref|XP_002512090.1| pentatricopeptide repeat-containing protein,... 103 2e-20
ref|XP_002274321.2| PREDICTED: pentatricopeptide repeat-containi... 102 4e-20
gb|EXB44833.1| hypothetical protein L484_026413 [Morus notabilis] 101 9e-20
ref|XP_002893403.1| pentatricopeptide repeat-containing protein ... 101 9e-20
ref|XP_004144175.1| PREDICTED: pentatricopeptide repeat-containi... 100 2e-19
gb|EPS71121.1| hypothetical protein M569_03636 [Genlisea aurea] 100 2e-19
ref|NP_564247.1| pentatricopeptide repeat-containing protein [Ar... 100 3e-19
>ref|XP_006657919.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26460,
mitochondrial-like [Oryza brachyantha]
Length = 498
Score = 120 bits (302), Expect = 1e-25
Identities = 57/75 (76%), Positives = 67/75 (89%)
Frame = +3
Query: 3 VNRDPKAALSVIDEMIKAGFTPSKESLKKLRRRCSREIDFDSDEKVQSLAQMFNYRLGQE 182
VNRDPKAAL+VIDEM+ AGFTPSKE+LKK+RRRCSRE DFDSDEKVQSL + F+YR+G E
Sbjct: 418 VNRDPKAALAVIDEMVGAGFTPSKETLKKVRRRCSRESDFDSDEKVQSLVKQFSYRMGGE 477
Query: 183 TRREILYNIKYSTDY 227
RRE+LYNI YS ++
Sbjct: 478 NRREMLYNIDYSREF 492
>ref|XP_004958215.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26460,
mitochondrial-like [Setaria italica]
Length = 610
Score = 118 bits (295), Expect = 9e-25
Identities = 54/74 (72%), Positives = 67/74 (90%)
Frame = +3
Query: 6 NRDPKAALSVIDEMIKAGFTPSKESLKKLRRRCSREIDFDSDEKVQSLAQMFNYRLGQET 185
N+DPKAAL++ID+M+ AGFTPSK++LKK+RRRCSRE DFDSDEKVQSLA+ FNYR+G E
Sbjct: 537 NKDPKAALAIIDKMVDAGFTPSKDTLKKVRRRCSRESDFDSDEKVQSLAKQFNYRMGGEN 596
Query: 186 RREILYNIKYSTDY 227
RRE+LYNI+Y+ Y
Sbjct: 597 RREMLYNIEYNPVY 610
>ref|NP_001060186.1| Os07g0599000 [Oryza sativa Japonica Group]
gi|33354185|dbj|BAC81166.1| pentatricopeptide (PPR)
repeat-containing protein-like protein [Oryza sativa
Japonica Group] gi|113611722|dbj|BAF22100.1|
Os07g0599000 [Oryza sativa Japonica Group]
Length = 623
Score = 118 bits (295), Expect = 9e-25
Identities = 56/75 (74%), Positives = 67/75 (89%)
Frame = +3
Query: 3 VNRDPKAALSVIDEMIKAGFTPSKESLKKLRRRCSREIDFDSDEKVQSLAQMFNYRLGQE 182
VNRD KAAL+VI EM+ AGFTPSKE+LKK+RRRCSRE DFDSDEKVQSLA+ FNYR+G E
Sbjct: 542 VNRDAKAALAVIAEMVDAGFTPSKETLKKVRRRCSRESDFDSDEKVQSLAKQFNYRMGGE 601
Query: 183 TRREILYNIKYSTDY 227
RRE+L+NI+YS ++
Sbjct: 602 NRREMLFNIEYSAEF 616
>gb|EAZ40545.1| hypothetical protein OsJ_25000 [Oryza sativa Japonica Group]
Length = 629
Score = 118 bits (295), Expect = 9e-25
Identities = 56/75 (74%), Positives = 67/75 (89%)
Frame = +3
Query: 3 VNRDPKAALSVIDEMIKAGFTPSKESLKKLRRRCSREIDFDSDEKVQSLAQMFNYRLGQE 182
VNRD KAAL+VI EM+ AGFTPSKE+LKK+RRRCSRE DFDSDEKVQSLA+ FNYR+G E
Sbjct: 542 VNRDAKAALAVIAEMVDAGFTPSKETLKKVRRRCSRESDFDSDEKVQSLAKQFNYRMGGE 601
Query: 183 TRREILYNIKYSTDY 227
RRE+L+NI+YS ++
Sbjct: 602 NRREMLFNIEYSAEF 616
>ref|XP_002460970.1| hypothetical protein SORBIDRAFT_02g038410 [Sorghum bicolor]
gi|241924347|gb|EER97491.1| hypothetical protein
SORBIDRAFT_02g038410 [Sorghum bicolor]
Length = 616
Score = 117 bits (293), Expect = 2e-24
Identities = 54/74 (72%), Positives = 67/74 (90%)
Frame = +3
Query: 6 NRDPKAALSVIDEMIKAGFTPSKESLKKLRRRCSREIDFDSDEKVQSLAQMFNYRLGQET 185
N+DPKAAL++IDEM+ AGFTPSK++L+K+RRRCSRE DFDSDEKVQSLA+ FNYRLG E
Sbjct: 543 NKDPKAALAIIDEMVDAGFTPSKDTLRKVRRRCSRESDFDSDEKVQSLAKQFNYRLGGEN 602
Query: 186 RREILYNIKYSTDY 227
RRE+LY+I+Y+ Y
Sbjct: 603 RREMLYSIEYNPVY 616
>ref|XP_003562755.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26460,
mitochondrial-like [Brachypodium distachyon]
Length = 618
Score = 117 bits (292), Expect = 2e-24
Identities = 55/75 (73%), Positives = 65/75 (86%)
Frame = +3
Query: 3 VNRDPKAALSVIDEMIKAGFTPSKESLKKLRRRCSREIDFDSDEKVQSLAQMFNYRLGQE 182
VNRDPKAAL+VIDEM+ GFTPSKE+LKK+RRRCSRE DFDSDEK+QSL + N R+G E
Sbjct: 544 VNRDPKAALAVIDEMVDVGFTPSKETLKKVRRRCSRESDFDSDEKLQSLCKQLNCRMGGE 603
Query: 183 TRREILYNIKYSTDY 227
RRE+LYNI+YS +Y
Sbjct: 604 GRRELLYNIEYSAEY 618
>tpg|DAA63474.1| TPA: hypothetical protein ZEAMMB73_429774 [Zea mays]
Length = 179
Score = 116 bits (291), Expect = 3e-24
Identities = 53/74 (71%), Positives = 67/74 (90%)
Frame = +3
Query: 6 NRDPKAALSVIDEMIKAGFTPSKESLKKLRRRCSREIDFDSDEKVQSLAQMFNYRLGQET 185
N+DPKAAL++IDEM+ AGFTPSK++L+K+RRRCSRE DFDSDEKVQSLA+ FNYR+G E
Sbjct: 106 NKDPKAALAIIDEMVDAGFTPSKDTLRKVRRRCSRESDFDSDEKVQSLAKQFNYRMGGEN 165
Query: 186 RREILYNIKYSTDY 227
RRE+LY+I+Y+ Y
Sbjct: 166 RREMLYSIEYNPVY 179
>tpg|DAA63472.1| TPA: hypothetical protein ZEAMMB73_429774 [Zea mays]
Length = 618
Score = 116 bits (291), Expect = 3e-24
Identities = 53/74 (71%), Positives = 67/74 (90%)
Frame = +3
Query: 6 NRDPKAALSVIDEMIKAGFTPSKESLKKLRRRCSREIDFDSDEKVQSLAQMFNYRLGQET 185
N+DPKAAL++IDEM+ AGFTPSK++L+K+RRRCSRE DFDSDEKVQSLA+ FNYR+G E
Sbjct: 545 NKDPKAALAIIDEMVDAGFTPSKDTLRKVRRRCSRESDFDSDEKVQSLAKQFNYRMGGEN 604
Query: 186 RREILYNIKYSTDY 227
RRE+LY+I+Y+ Y
Sbjct: 605 RREMLYSIEYNPVY 618
>tpg|DAA41331.1| TPA: hypothetical protein ZEAMMB73_952868 [Zea mays]
gi|414590761|tpg|DAA41332.1| TPA: hypothetical protein
ZEAMMB73_952868 [Zea mays]
Length = 407
Score = 116 bits (291), Expect = 3e-24
Identities = 53/74 (71%), Positives = 67/74 (90%)
Frame = +3
Query: 6 NRDPKAALSVIDEMIKAGFTPSKESLKKLRRRCSREIDFDSDEKVQSLAQMFNYRLGQET 185
N+DPKAAL++IDEM+ AGFTPSK++L+K+RRRCSRE DFDSDEKVQSLA+ FNYR+G E
Sbjct: 334 NKDPKAALAIIDEMVDAGFTPSKDTLRKVRRRCSRESDFDSDEKVQSLAKQFNYRMGGEN 393
Query: 186 RREILYNIKYSTDY 227
RRE+LY+I+Y+ Y
Sbjct: 394 RREMLYSIEYNPVY 407
>gb|EAZ04596.1| hypothetical protein OsI_26746 [Oryza sativa Indica Group]
Length = 945
Score = 116 bits (291), Expect = 3e-24
Identities = 55/75 (73%), Positives = 67/75 (89%)
Frame = +3
Query: 3 VNRDPKAALSVIDEMIKAGFTPSKESLKKLRRRCSREIDFDSDEKVQSLAQMFNYRLGQE 182
VNRD KAAL+VI EM+ AGFTPSKE+LKK++RRCSRE DFDSDEKVQSLA+ FNYR+G E
Sbjct: 858 VNRDAKAALAVIAEMVDAGFTPSKETLKKVQRRCSRESDFDSDEKVQSLAKQFNYRMGGE 917
Query: 183 TRREILYNIKYSTDY 227
RRE+L+NI+YS ++
Sbjct: 918 NRREMLFNIEYSAEF 932
>gb|EMT08169.1| hypothetical protein F775_26170 [Aegilops tauschii]
Length = 521
Score = 114 bits (285), Expect = 1e-23
Identities = 53/75 (70%), Positives = 65/75 (86%)
Frame = +3
Query: 3 VNRDPKAALSVIDEMIKAGFTPSKESLKKLRRRCSREIDFDSDEKVQSLAQMFNYRLGQE 182
VNRDPKAAL+V+DEM+ GFTPSKE+LKK+RRRCSRE DFDSDEK+QSL + N +G E
Sbjct: 447 VNRDPKAALAVLDEMVDVGFTPSKETLKKVRRRCSRESDFDSDEKLQSLCKRLNLWMGGE 506
Query: 183 TRREILYNIKYSTDY 227
+RRE+LYNI+YS +Y
Sbjct: 507 SRRELLYNIEYSAEY 521
>dbj|BAK08122.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 622
Score = 113 bits (282), Expect = 3e-23
Identities = 53/75 (70%), Positives = 64/75 (85%)
Frame = +3
Query: 3 VNRDPKAALSVIDEMIKAGFTPSKESLKKLRRRCSREIDFDSDEKVQSLAQMFNYRLGQE 182
VNRDPKAAL+V+DEM+ GFTPSKE+LKK+RRRCSRE DF SDEK+QSL + N R+G E
Sbjct: 548 VNRDPKAALAVLDEMVDVGFTPSKETLKKVRRRCSRESDFGSDEKLQSLCKRLNLRMGGE 607
Query: 183 TRREILYNIKYSTDY 227
RRE+LYNI+YS +Y
Sbjct: 608 GRREMLYNIEYSAEY 622
>dbj|BAJ85490.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 622
Score = 110 bits (275), Expect = 2e-22
Identities = 52/75 (69%), Positives = 63/75 (84%)
Frame = +3
Query: 3 VNRDPKAALSVIDEMIKAGFTPSKESLKKLRRRCSREIDFDSDEKVQSLAQMFNYRLGQE 182
VNRDPKAAL+V+DEM+ GFTPSKE+LKK+RRRCSRE DF SDEK+QSL + N R+G E
Sbjct: 548 VNRDPKAALAVLDEMVDVGFTPSKETLKKVRRRCSRESDFGSDEKLQSLCKRLNLRMGGE 607
Query: 183 TRREILYNIKYSTDY 227
RRE+ YNI+YS +Y
Sbjct: 608 GRREMPYNIEYSAEY 622
>ref|XP_002512090.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223549270|gb|EEF50759.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 619
Score = 103 bits (258), Expect = 2e-20
Identities = 47/75 (62%), Positives = 64/75 (85%)
Frame = +3
Query: 3 VNRDPKAALSVIDEMIKAGFTPSKESLKKLRRRCSREIDFDSDEKVQSLAQMFNYRLGQE 182
+NRD K ALSVI+EM+ AGFTPSKE+LKK+RRRC RE+D+DSD++V S+A+ R+G E
Sbjct: 543 INRDVKTALSVIEEMMSAGFTPSKETLKKVRRRCVREMDYDSDDRVGSVAKNCKIRMGTE 602
Query: 183 TRREILYNIKYSTDY 227
RR++L+N++YSTDY
Sbjct: 603 NRRDMLFNLEYSTDY 617
>ref|XP_002274321.2| PREDICTED: pentatricopeptide repeat-containing protein At1g26460,
mitochondrial-like [Vitis vinifera]
gi|297738080|emb|CBI27281.3| unnamed protein product
[Vitis vinifera]
Length = 616
Score = 102 bits (255), Expect = 4e-20
Identities = 46/75 (61%), Positives = 64/75 (85%)
Frame = +3
Query: 3 VNRDPKAALSVIDEMIKAGFTPSKESLKKLRRRCSREIDFDSDEKVQSLAQMFNYRLGQE 182
+NRD KAALSVI+EMI AGF PSKE LKK+RRRC RE+D++S+++V+SLA+ F R+G E
Sbjct: 541 INRDQKAALSVIEEMINAGFAPSKEILKKVRRRCIREMDYESNDQVESLARKFKIRMGTE 600
Query: 183 TRREILYNIKYSTDY 227
RR++L+N+ Y+T+Y
Sbjct: 601 NRRDMLFNLAYNTEY 615
>gb|EXB44833.1| hypothetical protein L484_026413 [Morus notabilis]
Length = 665
Score = 101 bits (252), Expect = 9e-20
Identities = 43/75 (57%), Positives = 64/75 (85%)
Frame = +3
Query: 3 VNRDPKAALSVIDEMIKAGFTPSKESLKKLRRRCSREIDFDSDEKVQSLAQMFNYRLGQE 182
+NRD KAALS++D+M+ AGF PSKE+LKK+RRRC RE+D++S+++VQS A + R+G E
Sbjct: 589 INRDQKAALSMLDDMVNAGFEPSKETLKKVRRRCIREMDYESNDRVQSFAVKYKIRMGTE 648
Query: 183 TRREILYNIKYSTDY 227
RR++L+N++YST+Y
Sbjct: 649 NRRDMLFNLRYSTEY 663
>ref|XP_002893403.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297339245|gb|EFH69662.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 630
Score = 101 bits (252), Expect = 9e-20
Identities = 44/72 (61%), Positives = 63/72 (87%)
Frame = +3
Query: 3 VNRDPKAALSVIDEMIKAGFTPSKESLKKLRRRCSREIDFDSDEKVQSLAQMFNYRLGQE 182
+NRDPK+AL+V+D+MIKAGF PS+E+LKKLRRRC RE+D+++D++V++LA+ F R+G E
Sbjct: 552 INRDPKSALTVVDDMIKAGFEPSRETLKKLRRRCVREMDYENDDQVEALAKKFQIRMGTE 611
Query: 183 TRREILYNIKYS 218
RR +L+NI YS
Sbjct: 612 NRRNMLFNIDYS 623
>ref|XP_004144175.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26460,
mitochondrial-like [Cucumis sativus]
gi|449489211|ref|XP_004158247.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g26460,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 100 bits (250), Expect = 2e-19
Identities = 45/75 (60%), Positives = 61/75 (81%)
Frame = +3
Query: 3 VNRDPKAALSVIDEMIKAGFTPSKESLKKLRRRCSREIDFDSDEKVQSLAQMFNYRLGQE 182
+NRDPK+AL+ ID M+ AGF PSKE LKK+RRRC RE D+DS++KV +LAQ F R+G E
Sbjct: 542 INRDPKSALAAIDNMVTAGFAPSKELLKKVRRRCIREQDYDSNDKVGNLAQNFKIRMGSE 601
Query: 183 TRREILYNIKYSTDY 227
+RR+IL+N+ Y ++Y
Sbjct: 602 SRRDILFNLNYGSNY 616
>gb|EPS71121.1| hypothetical protein M569_03636 [Genlisea aurea]
Length = 618
Score = 100 bits (249), Expect = 2e-19
Identities = 44/75 (58%), Positives = 61/75 (81%)
Frame = +3
Query: 3 VNRDPKAALSVIDEMIKAGFTPSKESLKKLRRRCSREIDFDSDEKVQSLAQMFNYRLGQE 182
+ RDPKAAL+++DEM+ G+ PSK LKK+RRRC RE+D++SD+KV A+ FN RLG E
Sbjct: 543 IKRDPKAALTLMDEMVDEGYEPSKAMLKKVRRRCIREMDYESDDKVDWFAKKFNIRLGSE 602
Query: 183 TRREILYNIKYSTDY 227
TRR+ L+N++YST+Y
Sbjct: 603 TRRDALFNLQYSTEY 617
>ref|NP_564247.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173405|sp|Q9FZD1.1|PPR58_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g26460, mitochondrial; Flags: Precursor
gi|9797754|gb|AAF98572.1|AC013427_15 Contains similarity
to a hypothetical protein F21B7.16 gi|7485908 from
Arabidopsis thaliana BAC F21B7 gb|AC002560 and contains
multiple PPR PF|01535 repeats and a domain of unknown
function PF|00668. ESTs gb|T45755, gb|AI993167,
gb|AV554476, gb|T46823, gb|T41981, gb|AV546597,
gb|AI099868 come from this gene [Arabidopsis thaliana]
gi|19698979|gb|AAL91225.1| unknown protein [Arabidopsis
thaliana] gi|22136300|gb|AAM91228.1| unknown protein
[Arabidopsis thaliana] gi|332192573|gb|AEE30694.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 99.8 bits (247), Expect = 3e-19
Identities = 44/72 (61%), Positives = 62/72 (86%)
Frame = +3
Query: 3 VNRDPKAALSVIDEMIKAGFTPSKESLKKLRRRCSREIDFDSDEKVQSLAQMFNYRLGQE 182
+NRDPK+AL+V+D+MIKAGF PS+E+LKKLRRRC RE+D ++D++V++LA+ F R+G E
Sbjct: 552 INRDPKSALTVVDDMIKAGFEPSRETLKKLRRRCVREMDDENDDQVEALAKKFQIRMGSE 611
Query: 183 TRREILYNIKYS 218
RR +L+NI YS
Sbjct: 612 NRRNMLFNIDYS 623