BLASTX nr result

ID: Zingiber23_contig00015107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00015107
         (237 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC85245.1| salt tolerance protein 4 [Beta vulgaris]              100   2e-19
gb|ABK25331.1| unknown [Picea sitchensis] gi|224284327|gb|ACN398...    96   4e-18
ref|XP_002513523.1| polyadenylate-binding protein, putative [Ric...    94   2e-17
ref|XP_002281228.1| PREDICTED: RNA-binding protein 8A [Vitis vin...    92   7e-17
ref|XP_002299789.1| hypothetical protein POPTR_0001s26260g [Popu...    92   9e-17
ref|XP_006305632.1| hypothetical protein CARUB_v10010327mg [Caps...    91   1e-16
gb|EMJ12671.1| hypothetical protein PRUPE_ppa007553mg [Prunus pe...    89   5e-16
gb|EAY96495.1| hypothetical protein OsI_18397 [Oryza sativa Indi...    89   8e-16
ref|NP_001274809.1| uncharacterized protein LOC102577678 [Solanu...    88   1e-15
gb|AFL91695.1| RNA binding protein [Raphanus sativus var. raphan...    88   1e-15
ref|NP_001054598.2| Os05g0140500 [Oryza sativa Japonica Group] g...    87   2e-15
dbj|BAH01663.1| unnamed protein product [Oryza sativa Japonica G...    87   2e-15
ref|XP_006379064.1| hypothetical protein POPTR_0009s05550g [Popu...    86   4e-15
ref|XP_002314085.2| hypothetical protein POPTR_0009s05550g [Popu...    86   4e-15
ref|XP_004139049.1| PREDICTED: RNA-binding protein 8A-like [Cucu...    86   4e-15
gb|ABB91897.1| Y14 protein [Taiwania cryptomerioides]                  86   5e-15
gb|EOY32841.1| RNA-binding family protein [Theobroma cacao]            86   7e-15
ref|XP_003568971.1| PREDICTED: RNA-binding protein 8A-like [Brac...    85   9e-15
gb|ABK96138.1| unknown [Populus trichocarpa]                           85   9e-15
ref|XP_001771298.1| predicted protein [Physcomitrella patens] gi...    85   1e-14

>emb|CAC85245.1| salt tolerance protein 4 [Beta vulgaris]
          Length = 203

 Score =  100 bits (250), Expect = 2e-19
 Identities = 52/84 (61%), Positives = 62/84 (73%), Gaps = 6/84 (7%)
 Frame = +3

Query: 3   EVVDFEPDEDDLMDEEVGIAEADPSPA---PKLRSTIAGVG---SSGLIPRKTKGRGFRE 164
           E VDFEP+EDDLMDE+ G AEAD SP    PK++S I G G   S G   +KTKGRGFRE
Sbjct: 7   EAVDFEPEEDDLMDEDGGAAEADGSPRAPHPKIKSAITGAGAPSSGGFGAKKTKGRGFRE 66

Query: 165 EAGPDRGSHLSARDFDSLDSDGGP 236
           +A  +R S ++AR+FDSLDSDGGP
Sbjct: 67  DADAERNSRMTAREFDSLDSDGGP 90


>gb|ABK25331.1| unknown [Picea sitchensis] gi|224284327|gb|ACN39899.1| unknown
           [Picea sitchensis]
          Length = 205

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 50/86 (58%), Positives = 63/86 (73%), Gaps = 8/86 (9%)
 Frame = +3

Query: 3   EVVDFEPDEDDLMDEEV----GIAEADPSPAPKLRSTIAG----VGSSGLIPRKTKGRGF 158
           + VDFEP+EDDLMD++     G A+A P+PAPKL+STI G    +G  G  P+KTKGRGF
Sbjct: 7   DAVDFEPEEDDLMDDDTAMDDGNADAVPTPAPKLKSTITGGTSQLGDGG--PKKTKGRGF 64

Query: 159 REEAGPDRGSHLSARDFDSLDSDGGP 236
           REE   +R S  +AR+F+SLDSDGGP
Sbjct: 65  REETDAERNSRFAAREFESLDSDGGP 90


>ref|XP_002513523.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223547431|gb|EEF48926.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 199

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 52/82 (63%), Positives = 63/82 (76%), Gaps = 4/82 (4%)
 Frame = +3

Query: 3   EVVDFEPDEDDLMDEEVGI-AEADP-SPAPKLRSTIAGVGSSGL-IPRKTKGRGFREEAG 173
           E VDFEP+EDDLMDE+ G+ A+A P +P PKL+S I G  +S L  PRKTKGRGFREEA 
Sbjct: 7   EAVDFEPEEDDLMDEDGGVDADASPRAPLPKLKSAITGGAASSLSAPRKTKGRGFREEAD 66

Query: 174 PDRGSHLSAR-DFDSLDSDGGP 236
            DR + L++R DFDSL +DGGP
Sbjct: 67  ADRQTRLASRGDFDSLGTDGGP 88


>ref|XP_002281228.1| PREDICTED: RNA-binding protein 8A [Vitis vinifera]
           gi|296088561|emb|CBI37552.3| unnamed protein product
           [Vitis vinifera]
          Length = 202

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 49/84 (58%), Positives = 58/84 (69%), Gaps = 6/84 (7%)
 Frame = +3

Query: 3   EVVDFEPDEDDLMDEEVGIAEADPS----PAPKLRSTIAGVGSSGLI--PRKTKGRGFRE 164
           E VDFEP++DDLMDE+ G  + D S    P PKL+S I G   S L   P+KTKGRGFR+
Sbjct: 7   EAVDFEPEDDDLMDED-GAVDVDNSSPRAPLPKLKSAITGGAPSSLAAAPKKTKGRGFRD 65

Query: 165 EAGPDRGSHLSARDFDSLDSDGGP 236
           +   DR S  +ARDFDSLDSDGGP
Sbjct: 66  DTDADRNSRFAARDFDSLDSDGGP 89


>ref|XP_002299789.1| hypothetical protein POPTR_0001s26260g [Populus trichocarpa]
           gi|118484267|gb|ABK94013.1| unknown [Populus
           trichocarpa] gi|222847047|gb|EEE84594.1| hypothetical
           protein POPTR_0001s26260g [Populus trichocarpa]
          Length = 205

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 51/85 (60%), Positives = 59/85 (69%), Gaps = 7/85 (8%)
 Frame = +3

Query: 3   EVVDFEPDEDDLMDEEVGIAEADPS-----PAPKLRSTIAGVGSSGLI--PRKTKGRGFR 161
           E VDFEP+EDDLMDE+ G A+AD S     P PKL+S I G  +S  +  P+KTKGRGFR
Sbjct: 7   EAVDFEPEEDDLMDED-GAADADASSSPRAPLPKLKSAITGGSASSSLSAPKKTKGRGFR 65

Query: 162 EEAGPDRGSHLSARDFDSLDSDGGP 236
           EE   +R S LS R FDSL SDGGP
Sbjct: 66  EEVDAERQSRLSGRGFDSLGSDGGP 90


>ref|XP_006305632.1| hypothetical protein CARUB_v10010327mg [Capsella rubella]
           gi|482574343|gb|EOA38530.1| hypothetical protein
           CARUB_v10010327mg [Capsella rubella]
          Length = 202

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 49/81 (60%), Positives = 55/81 (67%), Gaps = 4/81 (4%)
 Frame = +3

Query: 3   EVVDFEPDEDDLMDEE-VGIAEADPSPA---PKLRSTIAGVGSSGLIPRKTKGRGFREEA 170
           E VDFEP+EDDLMDEE   +  AD SP    P+L+S IAG        RKTKGRGFREE 
Sbjct: 7   EAVDFEPEEDDLMDEEGTAVDPADVSPRAGQPRLKSAIAGANGESAPQRKTKGRGFREER 66

Query: 171 GPDRGSHLSARDFDSLDSDGG 233
             DR  HLS+RDF+SL SDGG
Sbjct: 67  DSDRQRHLSSRDFESLGSDGG 87


>gb|EMJ12671.1| hypothetical protein PRUPE_ppa007553mg [Prunus persica]
          Length = 364

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 49/84 (58%), Positives = 59/84 (70%), Gaps = 7/84 (8%)
 Frame = +3

Query: 3   EVVDFEPDEDDLMDEEVGIAEADPS-----PAPKLRSTIAGVGSSG--LIPRKTKGRGFR 161
           E VDF+  EDDLMDEE G A+A+PS     P PKL+S I GVG+S     P+KTKGRGFR
Sbjct: 165 ETVDFDFQEDDLMDEE-GAADAEPSASPRAPQPKLKSAITGVGASASPAAPKKTKGRGFR 223

Query: 162 EEAGPDRGSHLSARDFDSLDSDGG 233
           E+  PDR + L+A DFDSL+S  G
Sbjct: 224 EDLNPDRNNRLAASDFDSLNSSDG 247


>gb|EAY96495.1| hypothetical protein OsI_18397 [Oryza sativa Indica Group]
          Length = 195

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 51/83 (61%), Positives = 60/83 (72%), Gaps = 5/83 (6%)
 Frame = +3

Query: 3   EVVDFEPDEDDLMDEEVGIAEADPSPAPKLRSTIAGVGSSGLI-PRKTKGRGFREEAGPD 179
           E VDF+PD+DDLMDE+   A+  P+PAP+LRSTIAG G  G    RKTKGRGFR++A P 
Sbjct: 10  EAVDFDPDDDDLMDEDA--ADPTPAPAPRLRSTIAGGGGGGDDGQRKTKGRGFRDDAAP- 66

Query: 180 RGSHLS----ARDFDSLDSDGGP 236
           R S L+    A DFDSL SDGGP
Sbjct: 67  RDSRLAGAGRASDFDSLGSDGGP 89


>ref|NP_001274809.1| uncharacterized protein LOC102577678 [Solanum tuberosum]
           gi|76573355|gb|ABA46782.1| unknown [Solanum tuberosum]
          Length = 195

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 48/79 (60%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
 Frame = +3

Query: 3   EVVDFEPDEDDLMDEEVGIAEADPSPAPKLRSTIAGVGSSGLIPRKTKGRGFREEAG-PD 179
           E VDFEP+EDDLMDE+V  + +  +  PKL+S I G  SS   P+KTKGRGFREEA   D
Sbjct: 7   EAVDFEPEEDDLMDEDVDASSSPRATIPKLKSAITGGSSSA--PKKTKGRGFREEAAEAD 64

Query: 180 RGSHLSARDFDSLDSDGGP 236
           R + +SAR FDSLDS+GGP
Sbjct: 65  RNARMSAR-FDSLDSEGGP 82


>gb|AFL91695.1| RNA binding protein [Raphanus sativus var. raphanistroides]
          Length = 200

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 46/79 (58%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
 Frame = +3

Query: 3   EVVDFEPDEDDLMDEEVGIAEADPSPA-PKLRSTIAGVGSSGLIPRKTKGRGFREEAGPD 179
           E VDFEP+EDDLMDE++G A+  P  A P+LRS I+G        RKTKGRGFREE   D
Sbjct: 7   EAVDFEPEEDDLMDEDLGAADISPRAAHPRLRSAISGADDESA-NRKTKGRGFREEKDSD 65

Query: 180 RGSHLSARDFDSLDSDGGP 236
           R   LS+RD +S  SDGGP
Sbjct: 66  RQRRLSSRDLESFGSDGGP 84


>ref|NP_001054598.2| Os05g0140500 [Oryza sativa Japonica Group]
           gi|255676006|dbj|BAF16512.2| Os05g0140500 [Oryza sativa
           Japonica Group]
          Length = 158

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 51/86 (59%), Positives = 60/86 (69%), Gaps = 8/86 (9%)
 Frame = +3

Query: 3   EVVDFEPDEDDLMDEEVGIAEADPSPAPKLRSTIAGVGSSG----LIPRKTKGRGFREEA 170
           E VDF+PD+DDLMDE+   A+  P+PAP+LRSTIAG G  G       RKTKGRGFR++A
Sbjct: 10  EAVDFDPDDDDLMDEDA--ADPTPAPAPRLRSTIAGGGGGGGGGDDGQRKTKGRGFRDDA 67

Query: 171 GPDRGSHLS----ARDFDSLDSDGGP 236
            P R S L+    A DFDSL SDGGP
Sbjct: 68  AP-RDSRLAGAGRASDFDSLGSDGGP 92


>dbj|BAH01663.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 204

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 51/86 (59%), Positives = 60/86 (69%), Gaps = 8/86 (9%)
 Frame = +3

Query: 3   EVVDFEPDEDDLMDEEVGIAEADPSPAPKLRSTIAGVGSSG----LIPRKTKGRGFREEA 170
           E VDF+PD+DDLMDE+   A+  P+PAP+LRSTIAG G  G       RKTKGRGFR++A
Sbjct: 10  EAVDFDPDDDDLMDEDA--ADPTPAPAPRLRSTIAGGGGGGGGGDDGQRKTKGRGFRDDA 67

Query: 171 GPDRGSHLS----ARDFDSLDSDGGP 236
            P R S L+    A DFDSL SDGGP
Sbjct: 68  AP-RDSRLAGAGRASDFDSLGSDGGP 92


>ref|XP_006379064.1| hypothetical protein POPTR_0009s05550g [Populus trichocarpa]
           gi|550331096|gb|ERP56861.1| hypothetical protein
           POPTR_0009s05550g [Populus trichocarpa]
          Length = 205

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 48/85 (56%), Positives = 56/85 (65%), Gaps = 7/85 (8%)
 Frame = +3

Query: 3   EVVDFEPDEDDLMDEEVGIAEADPS-----PAPKLRSTIAGVGSSGLI--PRKTKGRGFR 161
           E VDFEP+EDDLMDE+ G  + D S     P PKL+S I G  +S  +  P+KTKGRGFR
Sbjct: 7   EAVDFEPEEDDLMDED-GAVDVDASSSPRAPLPKLKSAITGGSASPSLSAPKKTKGRGFR 65

Query: 162 EEAGPDRGSHLSARDFDSLDSDGGP 236
           EE   +R S  S R FDSL SDGGP
Sbjct: 66  EEVDTERQSRFSGRGFDSLGSDGGP 90


>ref|XP_002314085.2| hypothetical protein POPTR_0009s05550g [Populus trichocarpa]
           gi|550331095|gb|EEE88040.2| hypothetical protein
           POPTR_0009s05550g [Populus trichocarpa]
          Length = 211

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 48/85 (56%), Positives = 56/85 (65%), Gaps = 7/85 (8%)
 Frame = +3

Query: 3   EVVDFEPDEDDLMDEEVGIAEADPS-----PAPKLRSTIAGVGSSGLI--PRKTKGRGFR 161
           E VDFEP+EDDLMDE+ G  + D S     P PKL+S I G  +S  +  P+KTKGRGFR
Sbjct: 7   EAVDFEPEEDDLMDED-GAVDVDASSSPRAPLPKLKSAITGGSASPSLSAPKKTKGRGFR 65

Query: 162 EEAGPDRGSHLSARDFDSLDSDGGP 236
           EE   +R S  S R FDSL SDGGP
Sbjct: 66  EEVDTERQSRFSGRGFDSLGSDGGP 90


>ref|XP_004139049.1| PREDICTED: RNA-binding protein 8A-like [Cucumis sativus]
          Length = 197

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 51/83 (61%), Positives = 58/83 (69%), Gaps = 5/83 (6%)
 Frame = +3

Query: 3   EVVDFEPDEDDLMDEEVGIAEADPSPA---PKLRSTIAGVGSSGLI--PRKTKGRGFREE 167
           E VDFEP+EDDLMDE+ G AEAD SP    PKL+S I G  SS L   P+KTKGRGFREE
Sbjct: 7   EAVDFEPEEDDLMDED-GAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGRGFREE 65

Query: 168 AGPDRGSHLSARDFDSLDSDGGP 236
           +  DR + L+  DFDSL S  GP
Sbjct: 66  S--DRNTRLAGSDFDSLKSADGP 86


>gb|ABB91897.1| Y14 protein [Taiwania cryptomerioides]
          Length = 216

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 47/95 (49%), Positives = 60/95 (63%), Gaps = 17/95 (17%)
 Frame = +3

Query: 3   EVVDFEPDEDDLMDEEVGIAEADPS---------PAPKLRSTIAGVGSSGLI-------- 131
           + VDFEP+EDDLM+++  + EA+           PAPKLRSTI G  S   +        
Sbjct: 7   DAVDFEPEEDDLMEDDATMDEANAGATGEAVPMVPAPKLRSTITGTTSQLQLSDGHGHDP 66

Query: 132 PRKTKGRGFREEAGPDRGSHLSARDFDSLDSDGGP 236
           P+KTKGRGFREE   +R +  +ARDFDSL+SDGGP
Sbjct: 67  PKKTKGRGFREETDFERNTRFTARDFDSLNSDGGP 101


>gb|EOY32841.1| RNA-binding family protein [Theobroma cacao]
          Length = 199

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 44/79 (55%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
 Frame = +3

Query: 3   EVVDFEPDEDDLMDEEVGIAEADPSPAPKLRSTIAGVGSSGLI-PRKTKGRGFREEAGPD 179
           E VDFEP++DDLMDE+     +  +P PKL+S I G  S+ L  P+KTKGRGFRE+   D
Sbjct: 7   EAVDFEPEDDDLMDEDAAGDASPQAPMPKLKSAITGGASTSLSGPKKTKGRGFRED-DAD 65

Query: 180 RGSHLSARDFDSLDSDGGP 236
           R S L++RDF+SL +DGGP
Sbjct: 66  RHSRLASRDFESLGTDGGP 84


>ref|XP_003568971.1| PREDICTED: RNA-binding protein 8A-like [Brachypodium distachyon]
          Length = 207

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 6/84 (7%)
 Frame = +3

Query: 3   EVVDFEPDEDDLMDEEVGIAEADPSPAPKLRSTIAGVGSSGLIPRKTKGRGFREE---AG 173
           E VDF+ D+DDLMDEE G  E  P+PAP+LRSTIAG G  G  PR+TKGRGFRE+   + 
Sbjct: 11  EAVDFDSDDDDLMDEE-GAIEPSPAPAPRLRSTIAGGGGGGDGPRRTKGRGFREDPNSSA 69

Query: 174 PDRGSHLSA---RDFDSLDSDGGP 236
             R S L+      FD+L SDGGP
Sbjct: 70  APRDSRLAGVGRSGFDALASDGGP 93


>gb|ABK96138.1| unknown [Populus trichocarpa]
          Length = 205

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 47/85 (55%), Positives = 56/85 (65%), Gaps = 7/85 (8%)
 Frame = +3

Query: 3   EVVDFEPDEDDLMDEEVGIAEADPS-----PAPKLRSTIAGVGSSGLI--PRKTKGRGFR 161
           E VDFEP++DDLMDE+ G  + D S     P PKL+S I G  +S  +  P+KTKGRGFR
Sbjct: 7   EAVDFEPEDDDLMDED-GAVDVDASSSPRAPLPKLKSAITGGSASPSLSAPKKTKGRGFR 65

Query: 162 EEAGPDRGSHLSARDFDSLDSDGGP 236
           EE   +R S  S R FDSL SDGGP
Sbjct: 66  EEVDTERQSRFSGRGFDSLGSDGGP 90


>ref|XP_001771298.1| predicted protein [Physcomitrella patens]
           gi|162677387|gb|EDQ63858.1| predicted protein
           [Physcomitrella patens]
          Length = 199

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 45/93 (48%), Positives = 57/93 (61%), Gaps = 15/93 (16%)
 Frame = +3

Query: 3   EVVDFEPDEDDLMDEEVGIAEAD--PSPAPKLRSTIAGVGSSG-------------LIPR 137
           + VDFEP+EDDL+DE+V + E D  P+P PKL+STI   G+ G                R
Sbjct: 8   DAVDFEPEEDDLLDEDVAMEELDAPPAPPPKLKSTIITSGTGGGSRMGGGAAAAAAAAGR 67

Query: 138 KTKGRGFREEAGPDRGSHLSARDFDSLDSDGGP 236
           KTKGRGFREE   DR    + ++F+SLDS GGP
Sbjct: 68  KTKGRGFREEGDADRSHRYAVKEFESLDSGGGP 100


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