BLASTX nr result

ID: Zingiber23_contig00015043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00015043
         (646 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK04360.1| predicted protein [Hordeum vulgare subsp. vulgare]     59   7e-10
gb|AFW72329.1| hypothetical protein ZEAMMB73_788348 [Zea mays]         56   4e-08
gb|EOY14395.1| SPla/RYanodine receptor domain-containing protein...    62   2e-07
gb|EXB56495.1| Protein SSH4 [Morus notabilis]                          60   5e-07
ref|XP_003575358.1| PREDICTED: uncharacterized protein LOC100827...    52   8e-07
ref|XP_002454173.1| hypothetical protein SORBIDRAFT_04g025990 [S...    54   1e-06
ref|XP_002326948.1| predicted protein [Populus trichocarpa]            56   8e-06

>dbj|BAK04360.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 498

 Score = 59.3 bits (142), Expect(2) = 7e-10
 Identities = 46/143 (32%), Positives = 54/143 (37%), Gaps = 29/143 (20%)
 Frame = -2

Query: 354 PVGWGGPHGLEEEAVEHGWSRFVFAGCRPXXXXXXXXXXXXXGTV----------ETNWE 205
           P  WG    L  EA EHGW++FVFA   P               V          E  WE
Sbjct: 102 PFQWGDHPRLVIEAAEHGWAQFVFAVAPPKARSASSSPLWGLCPVCDAGTSRDLSEAAWE 161

Query: 204 VPPGASEFSQTVRLQP---------------RGRRGSPLA----LRGEGAAATARMXXXX 82
           VP G+SE  Q VRL P                G   SPL     L       TARM    
Sbjct: 162 VPVGSSERLQAVRLNPVAAATGAAASSKKWLPGSLSSPLRNDQDLTSNNGFCTARMGMPL 221

Query: 81  XXXXXXLSSFPQEAYFEVTVLCL 13
                  + FPQ+AY E+T++ L
Sbjct: 222 PGPPMNGTPFPQDAYMEITIIYL 244



 Score = 30.4 bits (67), Expect(2) = 7e-10
 Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
 Frame = -3

Query: 512 PRLPQSASKARSQSLHA--GIAKLQFAYRSSTGRKASFLFHHLHYDHELAGEAPSRLDGG 339
           P LP  A    S    A  G+AKL   Y +S+GR     F  LH+ H +  +   R  GG
Sbjct: 37  PELPVGARGVGSADPAASPGLAKLNAKYTASSGR-VGVRFQQLHHHHHVRADTRLRGPGG 95


>gb|AFW72329.1| hypothetical protein ZEAMMB73_788348 [Zea mays]
          Length = 499

 Score = 56.2 bits (134), Expect(2) = 4e-08
 Identities = 44/142 (30%), Positives = 55/142 (38%), Gaps = 28/142 (19%)
 Frame = -2

Query: 354 PVGWGGPHGLEEEAVEHGWSRFVFAGCRPXXXXXXXXXXXXXGTV-------------ET 214
           P  W     L  EA E+GW++FVFA   P             GT                
Sbjct: 102 PFQWADHPRLVTEAAENGWAQFVFAVAPPRSKSKSASSSPLWGTCPLCDAGTSRDMAEAA 161

Query: 213 NWEVPPGASEFSQTVRLQPRGRRGS---------PLALRGE------GAAATARMXXXXX 79
            WE+P G+SE  Q VRL P     S         P  LRG+       A   ARM     
Sbjct: 162 AWELPMGSSERMQAVRLDPAAAAASSRKWLPGSNPSPLRGDTDAGNPNALCLARMSLPLP 221

Query: 78  XXXXXLSSFPQEAYFEVTVLCL 13
                 + FPQ+AYFE+T++ L
Sbjct: 222 GPPLAGAPFPQDAYFEITIIYL 243



 Score = 27.7 bits (60), Expect(2) = 4e-08
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = -3

Query: 512 PRLPQSASKARSQ-SLHAGIAKLQFAYRSSTGRKASFLFHHLH-YDHELAGEAPSRLDGG 339
           P LP+ +  A ++ +   G+AKL   Y +++GR     F  LH + H    +A  R  GG
Sbjct: 38  PALPEVSPTAVAEPTASPGLAKLNMRYNAASGR-VGLRFQQLHQHQHHARVDARHRGSGG 96


>gb|EOY14395.1| SPla/RYanodine receptor domain-containing protein [Theobroma cacao]
          Length = 480

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 38/116 (32%), Positives = 52/116 (44%), Gaps = 7/116 (6%)
 Frame = -2

Query: 345 WGGPHGLEEEAVEHGWSRFVFAGCRPXXXXXXXXXXXXXG-------TVETNWEVPPGAS 187
           W     L  +AVE+GWSRF F G                         +E NWEV  G++
Sbjct: 90  WADHPSLITDAVENGWSRFGFTGYMSSPSTRSSLLGLCAAGDYGKGHDIEINWEVCQGSA 149

Query: 186 EFSQTVRLQPRGRRGSPLALRGEGAAATARMXXXXXXXXXXLSSFPQEAYFEVTVL 19
           +F Q +RL    R+G+ +      AA+  R            S+FPQEAYFE+T+L
Sbjct: 150 DFMQKIRLNSGSRKGT-MGHHSMAAASVIRTALPLPGPPLGNSAFPQEAYFEITIL 204


>gb|EXB56495.1| Protein SSH4 [Morus notabilis]
          Length = 510

 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 13/122 (10%)
 Frame = -2

Query: 345 WGGPHGLEEEAVEHGWSRFVFAG-------------CRPXXXXXXXXXXXXXGTVETNWE 205
           W     L  +AVE+GWSRF F G              R                 ET+WE
Sbjct: 95  WADHPSLITDAVENGWSRFAFTGYMSSSSTASTRSSARLLGLCAVGGDVRRESEPETSWE 154

Query: 204 VPPGASEFSQTVRLQPRGRRGSPLALRGEGAAATARMXXXXXXXXXXLSSFPQEAYFEVT 25
           +   +++F Q +RL P  R+      +   A +  R            SSFPQEAYFE+T
Sbjct: 155 ICQESADFMQKIRLNPGLRKALNFGSQSAAATSVIRTALPLPGPPLGNSSFPQEAYFEIT 214

Query: 24  VL 19
           VL
Sbjct: 215 VL 216


>ref|XP_003575358.1| PREDICTED: uncharacterized protein LOC100827805 [Brachypodium
           distachyon]
          Length = 507

 Score = 52.4 bits (124), Expect(2) = 8e-07
 Identities = 44/149 (29%), Positives = 54/149 (36%), Gaps = 35/149 (23%)
 Frame = -2

Query: 354 PVGWGGPHGLEEEAVEHGWSRFVFAGCRPXXXXXXXXXXXXXGTV-----------ETNW 208
           P  WG    L  EA E+GW++FVF+  R                V           +  W
Sbjct: 100 PFQWGDHPRLVIEAAENGWAQFVFSVSRAKSTSASSSPLWGLCPVCDAGASRDMADQAAW 159

Query: 207 EVPPGASEFSQTVRLQPR---------------GRRGSPLALR---------GEGAAATA 100
           EVP G+SE  Q VRL P                G   SPL               A   A
Sbjct: 160 EVPAGSSERLQAVRLNPAAASAASAASGKKWLPGSITSPLRTSDHQDLTNNSSNNALCVA 219

Query: 99  RMXXXXXXXXXXLSSFPQEAYFEVTVLCL 13
           RM           + FPQEAYFE+T++ L
Sbjct: 220 RMSMPLPGPPMAGAPFPQEAYFEITIIYL 248



 Score = 26.9 bits (58), Expect(2) = 8e-07
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
 Frame = -3

Query: 512 PRLPQSAS-----KARSQSLHAGIAKLQFAYRSSTGRKASFLFHHLHYDH 378
           P LP ++       A   S   G+AKL   Y +S+GR     F  LH+ H
Sbjct: 37  PELPVASGGAGGGHAADLSASPGLAKLNAKYNASSGR-VGVRFQQLHHQH 85


>ref|XP_002454173.1| hypothetical protein SORBIDRAFT_04g025990 [Sorghum bicolor]
           gi|241934004|gb|EES07149.1| hypothetical protein
           SORBIDRAFT_04g025990 [Sorghum bicolor]
          Length = 501

 Score = 53.9 bits (128), Expect(2) = 1e-06
 Identities = 45/144 (31%), Positives = 58/144 (40%), Gaps = 30/144 (20%)
 Frame = -2

Query: 354 PVGWGGPHGLEEEAVEHGWSRFVFAGCRPXXXXXXXXXXXXXGTV-----------ETNW 208
           P  W     L  EA E+GW++FVFA   P               +              W
Sbjct: 100 PFQWADHPRLVTEAAENGWAQFVFAVAPPRSKSASLSPLWGTCPLCDAGTSRDMAEAAAW 159

Query: 207 EVPPGASEFSQTVRLQPR------GRR---GS-PLALRGE---------GAAATARMXXX 85
           E+P G+SE  Q VRL P       GR+   GS P  LRG+          A   ARM   
Sbjct: 160 ELPAGSSERMQAVRLNPAAAAAASGRKWLPGSIPSPLRGDTDGAGAGNPSALCIARMSLP 219

Query: 84  XXXXXXXLSSFPQEAYFEVTVLCL 13
                   + FPQ+AYFE+T++ L
Sbjct: 220 LPGPPLAGAPFPQDAYFEITIIYL 243



 Score = 24.6 bits (52), Expect(2) = 1e-06
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = -3

Query: 512 PRLPQSA--SKARSQSLHAGIAKLQFAYRSSTGRKASFLFHHLH 387
           P LP+ +  + A+  +   G+AKL   Y +++GR     F  LH
Sbjct: 38  PELPEVSPTAGAKPPTASPGLAKLNMRYNAASGR-VGLRFQQLH 80


>ref|XP_002326948.1| predicted protein [Populus trichocarpa]
          Length = 302

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 40/122 (32%), Positives = 53/122 (43%), Gaps = 8/122 (6%)
 Frame = -2

Query: 360 TEPV-GWGGPHGLEEEAVEHGWSRFVFAGCRPXXXXXXXXXXXXXG-------TVETNWE 205
           T P+  W     L  +AVE+GWSRF F    P                       E +WE
Sbjct: 85  TRPLFNWADHPALITDAVENGWSRFCFTSYMPSPSTRSSMLGLCAAGDPGRETDTEISWE 144

Query: 204 VPPGASEFSQTVRLQPRGRRGSPLALRGEGAAATARMXXXXXXXXXXLSSFPQEAYFEVT 25
           V  G+++F Q +RL   G +   ++     AA+  R            SSFPQEAYFE+T
Sbjct: 145 VCQGSADFMQKIRLNS-GLKKVNVSNPSLSAASVIRTALPLPGPPLGNSSFPQEAYFEIT 203

Query: 24  VL 19
           VL
Sbjct: 204 VL 205


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