BLASTX nr result
ID: Zingiber23_contig00014983
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00014983
(729 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001142057.1| uncharacterized protein LOC100274213 [Zea ma... 200 3e-49
ref|XP_002461285.1| hypothetical protein SORBIDRAFT_02g000210 [S... 197 3e-48
ref|XP_004955770.1| PREDICTED: DNA-directed RNA polymerase II su... 195 1e-47
ref|XP_003557416.1| PREDICTED: DNA-directed RNA polymerase II su... 195 1e-47
ref|XP_006650782.1| PREDICTED: DNA-directed RNA polymerases II, ... 195 1e-47
dbj|BAK06291.1| predicted protein [Hordeum vulgare subsp. vulgare] 192 1e-46
ref|NP_001058998.1| Os07g0172500 [Oryza sativa Japonica Group] g... 191 3e-46
ref|XP_002447457.1| hypothetical protein SORBIDRAFT_06g001360 [S... 188 1e-45
gb|AFW72351.1| hypothetical protein ZEAMMB73_926131 [Zea mays] 186 5e-45
ref|XP_003578343.1| PREDICTED: DNA-directed RNA polymerase II su... 186 5e-45
dbj|BAJ85721.1| predicted protein [Hordeum vulgare subsp. vulgar... 184 2e-44
gb|AFW72341.1| hypothetical protein ZEAMMB73_270623 [Zea mays] 180 4e-43
ref|XP_006857607.1| hypothetical protein AMTR_s00061p00108850 [A... 179 1e-42
ref|XP_003534400.1| PREDICTED: DNA-directed RNA polymerases II, ... 177 4e-42
gb|ESW03389.1| hypothetical protein PHAVU_011G010100g [Phaseolus... 176 5e-42
ref|NP_001240124.1| uncharacterized protein LOC100784219 [Glycin... 176 5e-42
ref|XP_006439089.1| hypothetical protein CICLE_v10033103mg [Citr... 175 2e-41
ref|XP_004149719.1| PREDICTED: DNA-directed RNA polymerase II su... 175 2e-41
gb|ABK22069.1| unknown [Picea sitchensis] gi|116785114|gb|ABK236... 175 2e-41
ref|XP_004289695.1| PREDICTED: DNA-directed RNA polymerase II su... 174 3e-41
>ref|NP_001142057.1| uncharacterized protein LOC100274213 [Zea mays]
gi|194696560|gb|ACF82364.1| unknown [Zea mays]
gi|194699868|gb|ACF84018.1| unknown [Zea mays]
gi|194706942|gb|ACF87555.1| unknown [Zea mays]
gi|195615212|gb|ACG29436.1| DNA-directed RNA polymerase
II subunit J [Zea mays] gi|195628620|gb|ACG36140.1|
DNA-directed RNA polymerase II subunit J [Zea mays]
gi|195656859|gb|ACG47897.1| DNA-directed RNA polymerase
II subunit J [Zea mays] gi|413937791|gb|AFW72342.1|
DNA-directed RNA polymerase II subunit J isoform 1 [Zea
mays] gi|413937792|gb|AFW72343.1| DNA-directed RNA
polymerase II subunit J isoform 2 [Zea mays]
gi|413937793|gb|AFW72344.1| DNA-directed RNA polymerase
II subunit J isoform 3 [Zea mays]
gi|413937794|gb|AFW72345.1| DNA-directed RNA polymerase
II subunit J isoform 4 [Zea mays]
gi|413937795|gb|AFW72346.1| DNA-directed RNA polymerase
II subunit J isoform 5 [Zea mays]
Length = 120
Score = 200 bits (509), Expect = 3e-49
Identities = 97/120 (80%), Positives = 106/120 (88%)
Frame = +3
Query: 102 MNAPDRYERFVVPEGTKKVSYERDTKIVNAAAFTIEREEHTVGNILRMQLHRDPNVLFAG 281
MNAPDRYERFVVPEGTKKVSYERDTKIVNAA+FT+ERE+HTVGNILRMQLHRDPNVLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIVNAASFTVEREDHTVGNILRMQLHRDPNVLFAG 60
Query: 282 YKLPHPLQYKIIVRIQTTSQSSPTQAYTQAIXXXXXXXXXXXXSFEDEKNREEEKLRQGY 461
YKLPHPLQYKIIVRI TTSQSSPTQAYTQAI +FEDEKNR E++++QG+
Sbjct: 61 YKLPHPLQYKIIVRIHTTSQSSPTQAYTQAINDLDKELEYLKQAFEDEKNRYEDRMKQGF 120
>ref|XP_002461285.1| hypothetical protein SORBIDRAFT_02g000210 [Sorghum bicolor]
gi|241924662|gb|EER97806.1| hypothetical protein
SORBIDRAFT_02g000210 [Sorghum bicolor]
Length = 120
Score = 197 bits (501), Expect = 3e-48
Identities = 95/120 (79%), Positives = 105/120 (87%)
Frame = +3
Query: 102 MNAPDRYERFVVPEGTKKVSYERDTKIVNAAAFTIEREEHTVGNILRMQLHRDPNVLFAG 281
MNAPDRYERFVVPEGTKKVSYERDTKIVNAA+FT+ERE+HTVGNILRMQLHRDPNVLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIVNAASFTVEREDHTVGNILRMQLHRDPNVLFAG 60
Query: 282 YKLPHPLQYKIIVRIQTTSQSSPTQAYTQAIXXXXXXXXXXXXSFEDEKNREEEKLRQGY 461
YKLPHPLQYKIIVRI T SQSSPTQAY+QA+ +FEDEKNR EE+++QG+
Sbjct: 61 YKLPHPLQYKIIVRIHTMSQSSPTQAYSQAVNDLDKELEYLKQAFEDEKNRYEERMKQGF 120
>ref|XP_004955770.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
[Setaria italica] gi|514825448|ref|XP_004987377.1|
PREDICTED: DNA-directed RNA polymerase II subunit
RPB11-like [Setaria italica]
Length = 120
Score = 195 bits (496), Expect = 1e-47
Identities = 95/120 (79%), Positives = 104/120 (86%)
Frame = +3
Query: 102 MNAPDRYERFVVPEGTKKVSYERDTKIVNAAAFTIEREEHTVGNILRMQLHRDPNVLFAG 281
MNAPDRYERFVVPEGTKKVSYERDTKIVNAA+FTIERE+HT+GNI+RMQLHRDPNVLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIVNAASFTIEREDHTIGNIVRMQLHRDPNVLFAG 60
Query: 282 YKLPHPLQYKIIVRIQTTSQSSPTQAYTQAIXXXXXXXXXXXXSFEDEKNREEEKLRQGY 461
YKLPHPLQYKIIVRI TTSQSSPTQAYTQA+ +FE EKNR EE+ +QG+
Sbjct: 61 YKLPHPLQYKIIVRIHTTSQSSPTQAYTQAVNDLDKELEYLKQAFEVEKNRYEERAKQGF 120
>ref|XP_003557416.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
[Brachypodium distachyon]
Length = 120
Score = 195 bits (496), Expect = 1e-47
Identities = 94/120 (78%), Positives = 104/120 (86%)
Frame = +3
Query: 102 MNAPDRYERFVVPEGTKKVSYERDTKIVNAAAFTIEREEHTVGNILRMQLHRDPNVLFAG 281
MNAPDRYERFVVPEGTKKVS+E+DTKI+NAA+FTIERE+HT+GNILRMQLHRDPNVLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSFEKDTKIMNAASFTIEREDHTIGNILRMQLHRDPNVLFAG 60
Query: 282 YKLPHPLQYKIIVRIQTTSQSSPTQAYTQAIXXXXXXXXXXXXSFEDEKNREEEKLRQGY 461
YKLPHPLQYKIIVRI T SQSSPTQAYTQ I +FEDEKNR EE+++QGY
Sbjct: 61 YKLPHPLQYKIIVRIHTASQSSPTQAYTQGIDDLDKELEILKQAFEDEKNRFEERMKQGY 120
>ref|XP_006650782.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
11-like [Oryza brachyantha]
gi|573950396|ref|XP_006657491.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 11-like [Oryza
brachyantha]
Length = 120
Score = 195 bits (495), Expect = 1e-47
Identities = 94/120 (78%), Positives = 103/120 (85%)
Frame = +3
Query: 102 MNAPDRYERFVVPEGTKKVSYERDTKIVNAAAFTIEREEHTVGNILRMQLHRDPNVLFAG 281
MNAPDRYERFVVPEGTKKVSYERDTKIVNA +FTIERE+HT+GNILRMQLHRDPNVLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIVNAGSFTIEREDHTIGNILRMQLHRDPNVLFAG 60
Query: 282 YKLPHPLQYKIIVRIQTTSQSSPTQAYTQAIXXXXXXXXXXXXSFEDEKNREEEKLRQGY 461
YKLPHPLQYKIIVR+ T +QS+PTQAYTQAI +FEDEKNR EE+ +QGY
Sbjct: 61 YKLPHPLQYKIIVRVHTANQSTPTQAYTQAINDLDKELENLKQAFEDEKNRYEERPKQGY 120
>dbj|BAK06291.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 120
Score = 192 bits (487), Expect = 1e-46
Identities = 93/120 (77%), Positives = 103/120 (85%)
Frame = +3
Query: 102 MNAPDRYERFVVPEGTKKVSYERDTKIVNAAAFTIEREEHTVGNILRMQLHRDPNVLFAG 281
MNAPDRYERFVVPEGTKKVS+E+DTKI+NAA+FTIERE+HT+GNILRMQLHRDPNV FAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSFEKDTKIMNAASFTIEREDHTIGNILRMQLHRDPNVHFAG 60
Query: 282 YKLPHPLQYKIIVRIQTTSQSSPTQAYTQAIXXXXXXXXXXXXSFEDEKNREEEKLRQGY 461
YKLPHPLQYKIIVRI T SQSSPTQAYTQAI +FEDEK R EE+++QGY
Sbjct: 61 YKLPHPLQYKIIVRIHTASQSSPTQAYTQAINDLDKELENLKQAFEDEKTRFEERMKQGY 120
>ref|NP_001058998.1| Os07g0172500 [Oryza sativa Japonica Group]
gi|34394446|dbj|BAC83620.1| putative DNA-directed RNA
polymerase II 13.6K chain [Oryza sativa Japonica Group]
gi|113610534|dbj|BAF20912.1| Os07g0172500 [Oryza sativa
Japonica Group] gi|215704597|dbj|BAG94225.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 120
Score = 191 bits (484), Expect = 3e-46
Identities = 92/120 (76%), Positives = 102/120 (85%)
Frame = +3
Query: 102 MNAPDRYERFVVPEGTKKVSYERDTKIVNAAAFTIEREEHTVGNILRMQLHRDPNVLFAG 281
MNAPDRYERFVVPEGTKKVSYERDTKIVNA +FTIERE+HT+GNILRMQLHRDPNVLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIVNAGSFTIEREDHTIGNILRMQLHRDPNVLFAG 60
Query: 282 YKLPHPLQYKIIVRIQTTSQSSPTQAYTQAIXXXXXXXXXXXXSFEDEKNREEEKLRQGY 461
YKLPHPLQYKI+VR+ T +QS+PTQAYTQAI +FEDEK R EE+ +QGY
Sbjct: 61 YKLPHPLQYKILVRVHTANQSTPTQAYTQAINDLDKELENLKQAFEDEKIRYEERPKQGY 120
>ref|XP_002447457.1| hypothetical protein SORBIDRAFT_06g001360 [Sorghum bicolor]
gi|241938640|gb|EES11785.1| hypothetical protein
SORBIDRAFT_06g001360 [Sorghum bicolor]
Length = 117
Score = 188 bits (478), Expect = 1e-45
Identities = 92/113 (81%), Positives = 99/113 (87%)
Frame = +3
Query: 102 MNAPDRYERFVVPEGTKKVSYERDTKIVNAAAFTIEREEHTVGNILRMQLHRDPNVLFAG 281
MNAPDRYERFVVPEGTKKVSYERDTKIVNAA+FTIERE+HT+GNI+RMQLHRDPNVLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIVNAASFTIEREDHTIGNIVRMQLHRDPNVLFAG 60
Query: 282 YKLPHPLQYKIIVRIQTTSQSSPTQAYTQAIXXXXXXXXXXXXSFEDEKNREE 440
YKLPHPLQYKIIVRI TTSQSSPTQAY+QA+ +FEDEKNR E
Sbjct: 61 YKLPHPLQYKIIVRIHTTSQSSPTQAYSQAVNDLDKELEYLKQAFEDEKNRFE 113
>gb|AFW72351.1| hypothetical protein ZEAMMB73_926131 [Zea mays]
Length = 120
Score = 186 bits (473), Expect = 5e-45
Identities = 92/120 (76%), Positives = 101/120 (84%)
Frame = +3
Query: 102 MNAPDRYERFVVPEGTKKVSYERDTKIVNAAAFTIEREEHTVGNILRMQLHRDPNVLFAG 281
MNAPD YE FVVPEGTKKVSYERDTKIVNAA+FT ERE+HTVGNILRMQLHRDPNVLFAG
Sbjct: 1 MNAPDHYEHFVVPEGTKKVSYERDTKIVNAASFTDEREDHTVGNILRMQLHRDPNVLFAG 60
Query: 282 YKLPHPLQYKIIVRIQTTSQSSPTQAYTQAIXXXXXXXXXXXXSFEDEKNREEEKLRQGY 461
YKLPHPLQYKIIVRI T SQSS TQAYTQAI +FEDEKNR +++++QG+
Sbjct: 61 YKLPHPLQYKIIVRIHTMSQSSLTQAYTQAINDLDKELEYLKQAFEDEKNRYKDRMKQGF 120
>ref|XP_003578343.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
isoform 1 [Brachypodium distachyon]
gi|357159117|ref|XP_003578344.1| PREDICTED: DNA-directed
RNA polymerase II subunit RPB11-like isoform 2
[Brachypodium distachyon]
Length = 119
Score = 186 bits (473), Expect = 5e-45
Identities = 91/115 (79%), Positives = 99/115 (86%)
Frame = +3
Query: 102 MNAPDRYERFVVPEGTKKVSYERDTKIVNAAAFTIEREEHTVGNILRMQLHRDPNVLFAG 281
MNAPDRYERFVVPEGTKKVS+E+DTKI+NAA+FTIERE+HT+GNILRMQLHRDPNVLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSFEKDTKIMNAASFTIEREDHTIGNILRMQLHRDPNVLFAG 60
Query: 282 YKLPHPLQYKIIVRIQTTSQSSPTQAYTQAIXXXXXXXXXXXXSFEDEKNREEEK 446
YKLPHPLQYKIIVRI T SQSSPTQAY QAI +FEDEKNR EE+
Sbjct: 61 YKLPHPLQYKIIVRIHTASQSSPTQAYNQAINDLDSELENLKQAFEDEKNRFEER 115
>dbj|BAJ85721.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518464|dbj|BAJ88261.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|326525789|dbj|BAJ88941.1|
predicted protein [Hordeum vulgare subsp. vulgare]
Length = 119
Score = 184 bits (468), Expect = 2e-44
Identities = 92/120 (76%), Positives = 101/120 (84%)
Frame = +3
Query: 102 MNAPDRYERFVVPEGTKKVSYERDTKIVNAAAFTIEREEHTVGNILRMQLHRDPNVLFAG 281
MNAPDRYERFVVPEGTKKVS+E+DTKI+NAA+FTIERE+HT+GNILRMQLHRDPNV FAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSFEKDTKIMNAASFTIEREDHTIGNILRMQLHRDPNVHFAG 60
Query: 282 YKLPHPLQYKIIVRIQTTSQSSPTQAYTQAIXXXXXXXXXXXXSFEDEKNREEEKLRQGY 461
YKLPHPLQYKIIVRI T SQSSPTQAYTQAI +FEDEK R E ++QGY
Sbjct: 61 YKLPHPLQYKIIVRIHTASQSSPTQAYTQAINDLDKELENLKQAFEDEKTR-FESMKQGY 119
>gb|AFW72341.1| hypothetical protein ZEAMMB73_270623 [Zea mays]
Length = 112
Score = 180 bits (457), Expect = 4e-43
Identities = 87/91 (95%), Positives = 90/91 (98%)
Frame = +3
Query: 102 MNAPDRYERFVVPEGTKKVSYERDTKIVNAAAFTIEREEHTVGNILRMQLHRDPNVLFAG 281
MNAPDRYERFVVPEGTKKVSYERDTKIVNAA+FT+ERE+HTVGNILRMQLHRDPNVLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIVNAASFTVEREDHTVGNILRMQLHRDPNVLFAG 60
Query: 282 YKLPHPLQYKIIVRIQTTSQSSPTQAYTQAI 374
YKLPHPLQYKIIVRI TTSQSSPTQAYTQAI
Sbjct: 61 YKLPHPLQYKIIVRIHTTSQSSPTQAYTQAI 91
>ref|XP_006857607.1| hypothetical protein AMTR_s00061p00108850 [Amborella trichopoda]
gi|548861703|gb|ERN19074.1| hypothetical protein
AMTR_s00061p00108850 [Amborella trichopoda]
Length = 122
Score = 179 bits (453), Expect = 1e-42
Identities = 86/91 (94%), Positives = 89/91 (97%)
Frame = +3
Query: 102 MNAPDRYERFVVPEGTKKVSYERDTKIVNAAAFTIEREEHTVGNILRMQLHRDPNVLFAG 281
MNAPDRYERFVVPEGTKKVSYERDTKI+NAA+FTIEREEHTVGN+LRMQLHRDPNVLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTVGNVLRMQLHRDPNVLFAG 60
Query: 282 YKLPHPLQYKIIVRIQTTSQSSPTQAYTQAI 374
YKLPHPLQYKIIVRIQTTSQSSP QAY QAI
Sbjct: 61 YKLPHPLQYKIIVRIQTTSQSSPMQAYNQAI 91
>ref|XP_003534400.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 11
[Glycine max]
Length = 116
Score = 177 bits (448), Expect = 4e-42
Identities = 87/108 (80%), Positives = 92/108 (85%)
Frame = +3
Query: 102 MNAPDRYERFVVPEGTKKVSYERDTKIVNAAAFTIEREEHTVGNILRMQLHRDPNVLFAG 281
MNAPDRYERFVVPEGTKKVSYERDTKI+NAA+FTIEREEHT+GNILRMQLHRDPNVLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDPNVLFAG 60
Query: 282 YKLPHPLQYKIIVRIQTTSQSSPTQAYTQAIXXXXXXXXXXXXSFEDE 425
YKLPHPLQYKIIVRI TTSQSSP QAY Q+I +FE E
Sbjct: 61 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQSINDLDRELDHLKSAFEAE 108
>gb|ESW03389.1| hypothetical protein PHAVU_011G010100g [Phaseolus vulgaris]
Length = 116
Score = 176 bits (447), Expect = 5e-42
Identities = 86/108 (79%), Positives = 92/108 (85%)
Frame = +3
Query: 102 MNAPDRYERFVVPEGTKKVSYERDTKIVNAAAFTIEREEHTVGNILRMQLHRDPNVLFAG 281
MNAPDRYERFVVPEGTKKVSYERDTKI+NAA+FTIEREEHT+GNILRMQLHRDPNVLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDPNVLFAG 60
Query: 282 YKLPHPLQYKIIVRIQTTSQSSPTQAYTQAIXXXXXXXXXXXXSFEDE 425
YKLPHPLQYKII+RI TTSQSSP QAY Q+I +FE E
Sbjct: 61 YKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDRELDHLKNAFEAE 108
>ref|NP_001240124.1| uncharacterized protein LOC100784219 [Glycine max]
gi|255626235|gb|ACU13462.1| unknown [Glycine max]
Length = 116
Score = 176 bits (447), Expect = 5e-42
Identities = 86/108 (79%), Positives = 92/108 (85%)
Frame = +3
Query: 102 MNAPDRYERFVVPEGTKKVSYERDTKIVNAAAFTIEREEHTVGNILRMQLHRDPNVLFAG 281
MNAPDRYERFVVPEGTKKVSYERDTKI+NAA+FTIEREEHT+GNILRMQLHRDPNVLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDPNVLFAG 60
Query: 282 YKLPHPLQYKIIVRIQTTSQSSPTQAYTQAIXXXXXXXXXXXXSFEDE 425
YKLPHPLQYKIIVRI TTSQSSP QAY Q++ +FE E
Sbjct: 61 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQSVNDLDRELDHLKSAFEAE 108
>ref|XP_006439089.1| hypothetical protein CICLE_v10033103mg [Citrus clementina]
gi|568858641|ref|XP_006482856.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 11-like [Citrus
sinensis] gi|557541285|gb|ESR52329.1| hypothetical
protein CICLE_v10033103mg [Citrus clementina]
Length = 116
Score = 175 bits (443), Expect = 2e-41
Identities = 87/108 (80%), Positives = 91/108 (84%)
Frame = +3
Query: 102 MNAPDRYERFVVPEGTKKVSYERDTKIVNAAAFTIEREEHTVGNILRMQLHRDPNVLFAG 281
MNAPDRYERFVVPEGTKKVSYERDTKI+NAA+FTIEREEHT+GNILRMQLHRD NVLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAG 60
Query: 282 YKLPHPLQYKIIVRIQTTSQSSPTQAYTQAIXXXXXXXXXXXXSFEDE 425
YKLPHPLQYKIIVRI TTSQSSP QAY QAI +FE E
Sbjct: 61 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDTLKSAFEAE 108
>ref|XP_004149719.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
[Cucumis sativus] gi|449516703|ref|XP_004165386.1|
PREDICTED: DNA-directed RNA polymerase II subunit
RPB11-like [Cucumis sativus]
Length = 116
Score = 175 bits (443), Expect = 2e-41
Identities = 87/108 (80%), Positives = 91/108 (84%)
Frame = +3
Query: 102 MNAPDRYERFVVPEGTKKVSYERDTKIVNAAAFTIEREEHTVGNILRMQLHRDPNVLFAG 281
MNAPDRYERFVVPEGTKKVSYERDTKI+NAA+FTIEREEHT+GNILRMQLHRD NVLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAG 60
Query: 282 YKLPHPLQYKIIVRIQTTSQSSPTQAYTQAIXXXXXXXXXXXXSFEDE 425
YKLPHPLQYKIIVRI TTSQSSP QAY QAI +FE E
Sbjct: 61 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFEAE 108
>gb|ABK22069.1| unknown [Picea sitchensis] gi|116785114|gb|ABK23600.1| unknown
[Picea sitchensis] gi|116790373|gb|ABK25590.1| unknown
[Picea sitchensis] gi|224284720|gb|ACN40091.1| unknown
[Picea sitchensis]
Length = 120
Score = 175 bits (443), Expect = 2e-41
Identities = 86/119 (72%), Positives = 96/119 (80%)
Frame = +3
Query: 102 MNAPDRYERFVVPEGTKKVSYERDTKIVNAAAFTIEREEHTVGNILRMQLHRDPNVLFAG 281
MNAPDRYE+FVVPEGTKKVSYERD KI+NAA F IERE+HT+GNI+RMQLHRDPNVLFAG
Sbjct: 1 MNAPDRYEKFVVPEGTKKVSYERDMKIMNAATFVIEREDHTIGNIVRMQLHRDPNVLFAG 60
Query: 282 YKLPHPLQYKIIVRIQTTSQSSPTQAYTQAIXXXXXXXXXXXXSFEDEKNREEEKLRQG 458
YKLPHPLQYKI++RIQTTSQSSP QAY AI SFEDE R + + R+G
Sbjct: 61 YKLPHPLQYKILLRIQTTSQSSPMQAYNLAIDDLDKELDHLKRSFEDEMVRLQSENREG 119
>ref|XP_004289695.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
isoform 2 [Fragaria vesca subsp. vesca]
Length = 118
Score = 174 bits (440), Expect = 3e-41
Identities = 86/108 (79%), Positives = 91/108 (84%)
Frame = +3
Query: 102 MNAPDRYERFVVPEGTKKVSYERDTKIVNAAAFTIEREEHTVGNILRMQLHRDPNVLFAG 281
MNAPDRYERFVVPEGTKKVSYERDTKI+NAA+FTIERE+HT+GNILRMQLHRD NVLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDENVLFAG 60
Query: 282 YKLPHPLQYKIIVRIQTTSQSSPTQAYTQAIXXXXXXXXXXXXSFEDE 425
YKLPHPLQYKIIVRI TTSQSSP QAY QAI +FE E
Sbjct: 61 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKSNFEAE 108