BLASTX nr result
ID: Zingiber23_contig00014937
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00014937
(1156 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001063463.1| Os09g0476100 [Oryza sativa Japonica Group] g... 184 4e-44
gb|EAZ09482.1| hypothetical protein OsI_31754 [Oryza sativa Indi... 184 4e-44
ref|XP_006661346.1| PREDICTED: cleavage and polyadenylation spec... 180 1e-42
ref|XP_003578288.1| PREDICTED: uncharacterized protein LOC100838... 179 2e-42
dbj|BAJ86181.1| predicted protein [Hordeum vulgare subsp. vulgar... 174 8e-41
ref|XP_006659525.1| PREDICTED: cleavage and polyadenylation spec... 172 2e-40
ref|XP_002444827.1| hypothetical protein SORBIDRAFT_07g028800 [S... 172 2e-40
ref|NP_001062111.1| Os08g0490300 [Oryza sativa Japonica Group] g... 171 7e-40
gb|AFW65135.1| hypothetical protein ZEAMMB73_625740 [Zea mays] g... 169 1e-39
ref|XP_004973768.1| PREDICTED: U1 small nuclear ribonucleoprotei... 169 2e-39
tpg|DAA47790.1| TPA: hypothetical protein ZEAMMB73_970575 [Zea m... 169 3e-39
ref|XP_002444828.1| hypothetical protein SORBIDRAFT_07g028810 [S... 165 3e-38
ref|XP_003574683.1| PREDICTED: uncharacterized protein LOC100827... 155 3e-35
tpg|DAA47788.1| TPA: hypothetical protein ZEAMMB73_344252 [Zea m... 154 8e-35
ref|XP_003551440.1| PREDICTED: cleavage and polyadenylation spec... 129 3e-27
ref|XP_003551437.1| PREDICTED: cleavage and polyadenylation spec... 128 4e-27
gb|EOY12029.1| RNA-binding family protein isoform 1 [Theobroma c... 127 8e-27
ref|XP_003532176.1| PREDICTED: cleavage and polyadenylation spec... 127 1e-26
gb|ESW18634.1| hypothetical protein PHAVU_006G057100g [Phaseolus... 126 1e-26
ref|XP_006586581.1| PREDICTED: cleavage and polyadenylation spec... 125 3e-26
>ref|NP_001063463.1| Os09g0476100 [Oryza sativa Japonica Group]
gi|52077336|dbj|BAD46377.1| RNA-binding protein-like
[Oryza sativa Japonica Group]
gi|113631696|dbj|BAF25377.1| Os09g0476100 [Oryza sativa
Japonica Group] gi|125606072|gb|EAZ45108.1| hypothetical
protein OsJ_29744 [Oryza sativa Japonica Group]
gi|215712236|dbj|BAG94363.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 604
Score = 184 bits (468), Expect = 4e-44
Identities = 93/160 (58%), Positives = 107/160 (66%), Gaps = 3/160 (1%)
Frame = +3
Query: 54 VAPPPPVLHPGAMIGQGFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFPPVVAPH 233
VAPPPP+LHPG M+GQGFD FPPVVAPH
Sbjct: 367 VAPPPPMLHPGGMLGQGFDPTGYGAAMGRMGGGFGGFPGGPGAAPFPGLMQPFPPVVAPH 426
Query: 234 VNPAFFGRG--LAPGGVGMWSDPNLGGWGGEEQSSYGEDAASDQQYGE-GSHGKERIAER 404
VNPAFFGRG + GGVGMW DP++GGWGGEEQSSYG+DAASDQQYGE GSHGKER ER
Sbjct: 427 VNPAFFGRGGGMGAGGVGMWPDPSMGGWGGEEQSSYGDDAASDQQYGEGGSHGKERPPER 486
Query: 405 DRYGAPERRHEKEKEMGSGQDWQERKHRDERERDSGREKE 524
+ GA +RR E+EK++ DW ER+HRD ERD+GRE+E
Sbjct: 487 EWSGASDRRREREKDLPPPPDWPERRHRD--ERDAGRERE 524
>gb|EAZ09482.1| hypothetical protein OsI_31754 [Oryza sativa Indica Group]
Length = 604
Score = 184 bits (468), Expect = 4e-44
Identities = 93/160 (58%), Positives = 107/160 (66%), Gaps = 3/160 (1%)
Frame = +3
Query: 54 VAPPPPVLHPGAMIGQGFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFPPVVAPH 233
VAPPPP+LHPG M+GQGFD FPPVVAPH
Sbjct: 367 VAPPPPMLHPGGMLGQGFDPTGYGAAMGRMGGGFGGFPGGPGAAPFPGLMQPFPPVVAPH 426
Query: 234 VNPAFFGRG--LAPGGVGMWSDPNLGGWGGEEQSSYGEDAASDQQYGE-GSHGKERIAER 404
VNPAFFGRG + GGVGMW DP++GGWGGEEQSSYG+DAASDQQYGE GSHGKER ER
Sbjct: 427 VNPAFFGRGGGMGAGGVGMWPDPSMGGWGGEEQSSYGDDAASDQQYGEGGSHGKERPPER 486
Query: 405 DRYGAPERRHEKEKEMGSGQDWQERKHRDERERDSGREKE 524
+ GA +RR E+EK++ DW ER+HRD ERD+GRE+E
Sbjct: 487 EWSGASDRRREREKDLPPPPDWPERRHRD--ERDAGRERE 524
>ref|XP_006661346.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like [Oryza brachyantha]
Length = 462
Score = 180 bits (456), Expect = 1e-42
Identities = 94/161 (58%), Positives = 106/161 (65%), Gaps = 4/161 (2%)
Frame = +3
Query: 54 VAPPPPVLHPGAMIGQGFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFPPVVAPH 233
VAPPPP+LHPG M+GQGFD FPPVVAPH
Sbjct: 224 VAPPPPMLHPGGMLGQGFDPTGYGAAMGRMGGGFGGFPGGPGAAPFPGLMQPFPPVVAPH 283
Query: 234 VNPAFFGRG--LAPGGVGMWSDPNLGG-WGGEEQSSYGEDAASDQQYGEG-SHGKERIAE 401
VNPAFFGRG + GGVGMW DP++GG WGGEEQSSYG+DAASDQQYGEG SHGKER E
Sbjct: 284 VNPAFFGRGGGMGAGGVGMWPDPSMGGGWGGEEQSSYGDDAASDQQYGEGGSHGKERPPE 343
Query: 402 RDRYGAPERRHEKEKEMGSGQDWQERKHRDERERDSGREKE 524
R+ GA ERR E+EK++ DW ER+HRD ERD GRE+E
Sbjct: 344 REWSGASERRREREKDLPPPPDWPERRHRD--ERDVGRERE 382
>ref|XP_003578288.1| PREDICTED: uncharacterized protein LOC100838039 isoform 1
[Brachypodium distachyon]
gi|357158941|ref|XP_003578289.1| PREDICTED:
uncharacterized protein LOC100838039 isoform 2
[Brachypodium distachyon]
gi|357158944|ref|XP_003578290.1| PREDICTED:
uncharacterized protein LOC100838039 isoform 3
[Brachypodium distachyon]
Length = 600
Score = 179 bits (454), Expect = 2e-42
Identities = 92/159 (57%), Positives = 104/159 (65%), Gaps = 2/159 (1%)
Frame = +3
Query: 54 VAPPPPVLHPGAMIGQGFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFPPVVAPH 233
VAPPPP++HPG M+GQGFD FPPVVAPH
Sbjct: 370 VAPPPPMMHPGGMMGQGFDPTGYGAAMGRMGGGFGGFPGGPGAAPFPGLMQPFPPVVAPH 429
Query: 234 VNPAFFGRG-LAPGGVGMWSDPNLGGWGGEEQSSYGEDAASDQQYGE-GSHGKERIAERD 407
VNPAFFGRG + GVGMW DP++GGWGGEEQSSYG+DAASDQ YGE GSHGKER ER+
Sbjct: 430 VNPAFFGRGGMGAAGVGMWPDPSMGGWGGEEQSSYGDDAASDQHYGEGGSHGKERPPERE 489
Query: 408 RYGAPERRHEKEKEMGSGQDWQERKHRDERERDSGREKE 524
GAPERR E+EKE+ D ER+HRD ERD GRE+E
Sbjct: 490 WSGAPERRREREKELPPPPDLPERRHRD--ERDMGRERE 526
>dbj|BAJ86181.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326523525|dbj|BAJ92933.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 602
Score = 174 bits (440), Expect = 8e-41
Identities = 91/161 (56%), Positives = 105/161 (65%), Gaps = 4/161 (2%)
Frame = +3
Query: 54 VAPPPPVLHPGAMIGQGFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFPPVVAPH 233
VAPPPP++HPG M+GQGFD FPPVVAPH
Sbjct: 364 VAPPPPMMHPGGMMGQGFDPTGYGAAMGRMGGGFGGFPGGPGGGPFPGLMQPFPPVVAPH 423
Query: 234 VNPAFFGRG--LAPGGVGMWSDPNLGG-WGGEEQSSYGEDAASDQQYGEG-SHGKERIAE 401
VNPAFFGRG + GGVGMW DP++GG WGGEEQSSYG+DAASDQ YGEG SHGKER E
Sbjct: 424 VNPAFFGRGGGMGAGGVGMWPDPSMGGGWGGEEQSSYGDDAASDQHYGEGASHGKERPPE 483
Query: 402 RDRYGAPERRHEKEKEMGSGQDWQERKHRDERERDSGREKE 524
R+ GAPERR E+EK++ + ER+HRD ERD GRE+E
Sbjct: 484 REWSGAPERRREREKDLPPPPELPERRHRD--ERDMGRERE 522
>ref|XP_006659525.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like [Oryza brachyantha]
Length = 600
Score = 172 bits (437), Expect = 2e-40
Identities = 93/168 (55%), Positives = 107/168 (63%), Gaps = 11/168 (6%)
Frame = +3
Query: 54 VAPPPPVLHPGAMIGQGFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFPPVVAPH 233
VAPPPP+L PG M+GQGFD FPPVVAPH
Sbjct: 360 VAPPPPMLPPGGMMGQGFDPTGYGAMGRMGAGFGGFPGAPGAGPFPGLMQP-FPPVVAPH 418
Query: 234 VNPAFFGRG-LAPGGVGMWSDPNLGGWGGEEQSSYGEDAASDQQYGE-GSHGKERI---A 398
VNPAFFGRG + GGVGMW DPN+GGWGGEEQSSYG+DAASDQQYGE G+HGKER
Sbjct: 419 VNPAFFGRGGMGAGGVGMWPDPNMGGWGGEEQSSYGDDAASDQQYGEGGNHGKERADRPP 478
Query: 399 ERDRYGAPERRHEKEKEMGSGQDWQERKHRDE------RERDSGREKE 524
+R+ GA ERR E+EK++ QDW ER+HRDE R+RD RE+E
Sbjct: 479 DREWSGASERRREREKDIPPAQDWPERRHRDERDMGRDRDRDYDRERE 526
>ref|XP_002444827.1| hypothetical protein SORBIDRAFT_07g028800 [Sorghum bicolor]
gi|241941177|gb|EES14322.1| hypothetical protein
SORBIDRAFT_07g028800 [Sorghum bicolor]
Length = 519
Score = 172 bits (437), Expect = 2e-40
Identities = 88/158 (55%), Positives = 101/158 (63%), Gaps = 1/158 (0%)
Frame = +3
Query: 54 VAPPPPVLHPGAMIGQGFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFPPVVAPH 233
VAPPPP++ PG M+GQGFD FPPVVAPH
Sbjct: 278 VAPPPPMMPPGGMLGQGFDPAGYGAMGRMGGGFGGFPGGPGAMPFPGLMQP-FPPVVAPH 336
Query: 234 VNPAFFGRGLAPGGVGMWSDPNLGGWGGEEQSSYGEDAASDQQYGEG-SHGKERIAERDR 410
VNPAFFGRG G GMW DPN+G WGGEEQSSYG+DAASDQQYGEG SHGKER ER+
Sbjct: 337 VNPAFFGRG-GMGAGGMWPDPNMGAWGGEEQSSYGDDAASDQQYGEGGSHGKERPPEREW 395
Query: 411 YGAPERRHEKEKEMGSGQDWQERKHRDERERDSGREKE 524
GAPERR E+EK+ Q+W ER+HRDER+ D R ++
Sbjct: 396 SGAPERRREREKDAPPAQEWPERRHRDERDMDRERNRD 433
>ref|NP_001062111.1| Os08g0490300 [Oryza sativa Japonica Group]
gi|42408488|dbj|BAD09668.1| putative cleavage and
polyadenylation specific factor [Oryza sativa Japonica
Group] gi|113624080|dbj|BAF24025.1| Os08g0490300 [Oryza
sativa Japonica Group] gi|125561991|gb|EAZ07439.1|
hypothetical protein OsI_29693 [Oryza sativa Indica
Group] gi|125603835|gb|EAZ43160.1| hypothetical protein
OsJ_27752 [Oryza sativa Japonica Group]
gi|215694980|dbj|BAG90171.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 603
Score = 171 bits (432), Expect = 7e-40
Identities = 91/162 (56%), Positives = 105/162 (64%), Gaps = 5/162 (3%)
Frame = +3
Query: 54 VAPPPPVLHPGAMIGQGFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFPPVVAPH 233
VAPPPP+L PG M+GQ FD FPPVVAPH
Sbjct: 359 VAPPPPMLPPGGMMGQAFDPTGYGAMGRMGAGFGGFPGAPGAGPFPGLMQP-FPPVVAPH 417
Query: 234 VNPAFFGRG-LAPGGVGMWSDPNLGGWGGEEQSSYGEDAASDQQYGE-GSHGKERI---A 398
VNPAFFGRG + GGVGMW DPN+GGWGGEEQSSYG+DAASDQQYGE GSHGKER
Sbjct: 418 VNPAFFGRGGMGAGGVGMWPDPNMGGWGGEEQSSYGDDAASDQQYGEGGSHGKERAERPP 477
Query: 399 ERDRYGAPERRHEKEKEMGSGQDWQERKHRDERERDSGREKE 524
+R+ GA ERR E+EK++ Q+W +RKHRD ERD GRE++
Sbjct: 478 DREWSGASERRREREKDIPPAQEWPDRKHRD--ERDMGRERD 517
>gb|AFW65135.1| hypothetical protein ZEAMMB73_625740 [Zea mays]
gi|413925204|gb|AFW65136.1| hypothetical protein
ZEAMMB73_625740 [Zea mays]
Length = 603
Score = 169 bits (429), Expect = 1e-39
Identities = 87/158 (55%), Positives = 100/158 (63%), Gaps = 1/158 (0%)
Frame = +3
Query: 54 VAPPPPVLHPGAMIGQGFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFPPVVAPH 233
VAPPPP++ PG M+GQGFD FPPVVAPH
Sbjct: 360 VAPPPPMMPPGGMLGQGFDPTGYGAMGRMGGGFGGFPGGPGAMPFPGLMQP-FPPVVAPH 418
Query: 234 VNPAFFGRGLAPGGVGMWSDPNLGGWGGEEQSSYGEDAASDQQYGE-GSHGKERIAERDR 410
VNPAFFGRG G GMW DPN+G WGGEEQSSYG+DAASDQQYGE GSHGKER ER+
Sbjct: 419 VNPAFFGRG-GMGAGGMWPDPNMGAWGGEEQSSYGDDAASDQQYGEGGSHGKERPPEREW 477
Query: 411 YGAPERRHEKEKEMGSGQDWQERKHRDERERDSGREKE 524
GAPERR E+EK+ Q+W ER+ RDER+ D R ++
Sbjct: 478 SGAPERRREREKDAPPAQEWPERRQRDERDMDRERNRD 515
>ref|XP_004973768.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Setaria
italica]
Length = 598
Score = 169 bits (428), Expect = 2e-39
Identities = 86/158 (54%), Positives = 101/158 (63%), Gaps = 1/158 (0%)
Frame = +3
Query: 54 VAPPPPVLHPGAMIGQGFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFPPVVAPH 233
VAPPPP++ PG M+GQGFD FPPVVAPH
Sbjct: 361 VAPPPPMMPPGGMLGQGFDPTGYGAMGRMGGGFGGFPGGPGAMPFPGLMQP-FPPVVAPH 419
Query: 234 VNPAFFGRGLAPGGVGMWSDPNLGGWGGEEQSSYGEDAASDQQYGEG-SHGKERIAERDR 410
VNPAFFGRG G GMW DPN+G WGGEEQSSYG+DAASDQQ+GEG SHGKER ER+
Sbjct: 420 VNPAFFGRG-GMGAGGMWPDPNMGAWGGEEQSSYGDDAASDQQHGEGGSHGKERPPEREW 478
Query: 411 YGAPERRHEKEKEMGSGQDWQERKHRDERERDSGREKE 524
GAPERR E+E+++ Q+W ER+HRDER+ D R +
Sbjct: 479 SGAPERRRERERDVPPAQEWPERRHRDERDMDRERNHD 516
>tpg|DAA47790.1| TPA: hypothetical protein ZEAMMB73_970575 [Zea mays]
Length = 596
Score = 169 bits (427), Expect = 3e-39
Identities = 86/158 (54%), Positives = 99/158 (62%), Gaps = 1/158 (0%)
Frame = +3
Query: 54 VAPPPPVLHPGAMIGQGFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFPPVVAPH 233
VAPPPP++ PG M+GQGFD FPPVVAPH
Sbjct: 357 VAPPPPMMPPGGMLGQGFDPAGYGAMGRMGGGFGGFPGGPGAMPFPGLMQP-FPPVVAPH 415
Query: 234 VNPAFFGRGLAPGGVGMWSDPNLGGWGGEEQSSYGEDAASDQQYGE-GSHGKERIAERDR 410
VNPAFFGR G GMW DPN+G WGGEEQSSYG+DAASDQQYGE GSHGKER ER+
Sbjct: 416 VNPAFFGRA-GMGAGGMWPDPNMGAWGGEEQSSYGDDAASDQQYGEGGSHGKERPPEREW 474
Query: 411 YGAPERRHEKEKEMGSGQDWQERKHRDERERDSGREKE 524
G PERR E+EK+ Q+W ER+HRDER+ D R ++
Sbjct: 475 SGVPERRREREKDAPPAQEWPERRHRDERDMDRERNRD 512
>ref|XP_002444828.1| hypothetical protein SORBIDRAFT_07g028810 [Sorghum bicolor]
gi|241941178|gb|EES14323.1| hypothetical protein
SORBIDRAFT_07g028810 [Sorghum bicolor]
Length = 592
Score = 165 bits (418), Expect = 3e-38
Identities = 87/165 (52%), Positives = 104/165 (63%), Gaps = 8/165 (4%)
Frame = +3
Query: 54 VAPPPPVLHPGAMIGQGFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFPPVVAPH 233
VAPPPP+L G M+GQGFD FPPVVAPH
Sbjct: 360 VAPPPPMLPQGGMLGQGFDPGFGAMGRMGGGFGNFPVGPGAGPFPGMMQP--FPPVVAPH 417
Query: 234 VNPAFFGRG-LAPGGVGMWSDPNLGGWGGEEQSSYGEDAASDQQYGE-GSHGKERIAERD 407
VNPAFFGRG + GGVGMW DP++G WG EEQS+YG+DAASD QYGE GSHGKER ER+
Sbjct: 418 VNPAFFGRGGMGAGGVGMWPDPSMGAWGAEEQSNYGDDAASDHQYGEGGSHGKERPPERE 477
Query: 408 RYGAPERRHEKEKEMGSGQDWQERKHRD------ERERDSGREKE 524
GA ERR ++EK+M Q+W ER+HR+ ER+RD GR++E
Sbjct: 478 WSGASERRRDREKDMPPEQEWSERRHRNEHDMGRERDRDYGRDRE 522
>ref|XP_003574683.1| PREDICTED: uncharacterized protein LOC100827188 [Brachypodium
distachyon]
Length = 586
Score = 155 bits (392), Expect = 3e-35
Identities = 86/160 (53%), Positives = 101/160 (63%), Gaps = 3/160 (1%)
Frame = +3
Query: 54 VAPP-PPVLHPGAMIGQGFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFPPVVAP 230
+APP PP + P ++GQGFD FPPVVAP
Sbjct: 358 MAPPHPPPMLPQGIMGQGFDPAFGPMGRMGNGFGFPGPGPAFPGMMQP-----FPPVVAP 412
Query: 231 HVNPAFFGRG-LAPGGVGMWSDPNLGGWGGEEQSSYGEDAASDQQYGE-GSHGKERIAER 404
H+NPAFFGRG + G VGMW DPN+G WGGEEQSSYG+DAASDQQYGE GSHGKER+ ER
Sbjct: 413 HLNPAFFGRGGMGAGSVGMWPDPNMGSWGGEEQSSYGDDAASDQQYGEGGSHGKERLPER 472
Query: 405 DRYGAPERRHEKEKEMGSGQDWQERKHRDERERDSGREKE 524
D G P+RR E+EK+M Q ER+HRD ERD GRE++
Sbjct: 473 DWSGPPDRRQEREKDMPPAQ--PERRHRD--ERDMGRERD 508
>tpg|DAA47788.1| TPA: hypothetical protein ZEAMMB73_344252 [Zea mays]
Length = 592
Score = 154 bits (388), Expect = 8e-35
Identities = 81/161 (50%), Positives = 100/161 (62%), Gaps = 2/161 (1%)
Frame = +3
Query: 54 VAPPPPVLHPGAMIGQGFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFPPVVAPH 233
VAPPPP+L G M+GQGFD FPPVVAPH
Sbjct: 364 VAPPPPMLPQGGMLGQGFDPGYGAMGRMGGGFGNFPVGPGAGPFPGMMQP--FPPVVAPH 421
Query: 234 VNPAFFGRG-LAPGGVGMWSDPNLGGWGGEEQSSYGEDAASDQQYGE-GSHGKERIAERD 407
+NPAFFGRG + GGVGMW DP +G WG EEQS+YG++A SD QYGE G HGKER +R+
Sbjct: 422 INPAFFGRGAMGAGGVGMWPDPGMGAWGVEEQSNYGDNAVSDHQYGEGGGHGKERPPDRE 481
Query: 408 RYGAPERRHEKEKEMGSGQDWQERKHRDERERDSGREKEMN 530
GAPE+R ++EK+M Q+ ER+HR+ ERD GRE++ N
Sbjct: 482 WSGAPEKRLDREKDMHPQQEQPERRHRN--ERDMGRERDRN 520
>ref|XP_003551440.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like [Glycine max]
Length = 696
Score = 129 bits (323), Expect = 3e-27
Identities = 84/202 (41%), Positives = 103/202 (50%), Gaps = 49/202 (24%)
Frame = +3
Query: 66 PPVLHPGAMIGQGFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFP-------PVV 224
PP+LHP +M+ QGFD SFP P V
Sbjct: 415 PPMLHPQSMMNQGFDPAFGGPMGRMGGYGGFPGAPAPPFSGILP---SFPGVGGVGLPGV 471
Query: 225 APHVNPAFFGRGLA-------PGGV------GMWSDPNLGGWGGEE-------QSSYGED 344
APHVNPAFFGRG+ PG V GMWSDPN+GGWGGEE +SSYGE+
Sbjct: 472 APHVNPAFFGRGMPVNGMGMMPGSVMDGPNMGMWSDPNMGGWGGEEPGGGKAGESSYGEE 531
Query: 345 AASDQQYGEGSHG--------KERIAERDRYGAPERRH------------EKEKEMGSGQ 464
AASDQQYGE SH K+R +ERD G+ ERR+ +EK+MG
Sbjct: 532 AASDQQYGEVSHDRAGWPMREKDRGSERDWSGSSERRYRDDRDQGYERDASREKDMGHDH 591
Query: 465 DWQERKHRDERE--RDSGREKE 524
+W ER+HRD+RE R+ R++E
Sbjct: 592 EWSERRHRDDRETGRERSRDRE 613
>ref|XP_003551437.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Glycine max]
gi|571543924|ref|XP_006602132.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185-like
isoform X2 [Glycine max]
gi|571543928|ref|XP_006602133.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185-like
isoform X3 [Glycine max]
Length = 698
Score = 128 bits (322), Expect = 4e-27
Identities = 84/199 (42%), Positives = 102/199 (51%), Gaps = 47/199 (23%)
Frame = +3
Query: 66 PPVLHPGAMIGQGFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFP-------PVV 224
PP+LHP +M+ QGFD SFP P V
Sbjct: 415 PPMLHPQSMMNQGFDPAFGGPMGRMGGYGGFPGAPAPPFSGILP---SFPGVGGVGLPGV 471
Query: 225 APHVNPAFFGRGLA-------PGGV------GMWSDPNLGGWGGEE-------QSSYGED 344
APHVNPAFFGRG+ PG V GMWSDPN+GGWGGEE +SSYGE+
Sbjct: 472 APHVNPAFFGRGMPVNGMGMMPGSVMDGPNMGMWSDPNMGGWGGEEPGGGKAGESSYGEE 531
Query: 345 AASDQQYGEGSHG--------KERIAERDRYGAPERRH------------EKEKEMGSGQ 464
AASDQQYGE SH K+R +ERD G+ ERR+ +EK+MG
Sbjct: 532 AASDQQYGEVSHDRAGWPMREKDRGSERDWSGSSERRYRDDRDQGYERDASREKDMGHDH 591
Query: 465 DWQERKHRDERERDSGREK 521
+W ER+HRD+RE +GRE+
Sbjct: 592 EWSERRHRDDRE--TGRER 608
>gb|EOY12029.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508720133|gb|EOY12030.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508720134|gb|EOY12031.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 709
Score = 127 bits (319), Expect = 8e-27
Identities = 82/206 (39%), Positives = 102/206 (49%), Gaps = 53/206 (25%)
Frame = +3
Query: 66 PPVLHPGAMIGQGFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFPPV-------V 224
PP++HP AM+GQGFD SFPPV V
Sbjct: 424 PPLMHPQAMMGQGFDPAFGGPMGRMGGYGGFPGAPTPPFSGILS---SFPPVGGVGLPGV 480
Query: 225 APHVNPAFFGRGLAPGG-------------VGMWSDPNLGGWGGEE-------QSSYGED 344
APHVNPAFFGRG+ G +GMWSDPN+GGWGG+E +SSYGE+
Sbjct: 481 APHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPNMGGWGGDEHGGGRAGESSYGEE 540
Query: 345 AASDQQYGEGSHG----------KERIAERDRYGAPERRHE------------KEKEMGS 458
AASD QYGE SH K+R +ERD G+ ERR+ +EK+MG
Sbjct: 541 AASDHQYGEVSHDRGGWQNPTKEKDRASERDWSGSSERRYRDDREPGYDKDMPREKDMGL 600
Query: 459 GQDWQERKHRDE----RERDSGREKE 524
DW ER+ RD+ RERD R+++
Sbjct: 601 EHDWPERRQRDDRDIVRERDRERDRD 626
>ref|XP_003532176.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like [Glycine max]
Length = 693
Score = 127 bits (318), Expect = 1e-26
Identities = 82/199 (41%), Positives = 99/199 (49%), Gaps = 47/199 (23%)
Frame = +3
Query: 66 PPVLHPGAMIGQGFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFP-------PVV 224
PP+LHP +M+ QGFD SFP P V
Sbjct: 413 PPLLHPQSMMNQGFDPAFGPMGRMGSYGGFPGAPTPPFSGILP----SFPGVGGVGLPGV 468
Query: 225 APHVNPAFFGRGLAPGGVGM-------------WSDPNLGGWGGEE-------QSSYGED 344
APHVNPAFFGRG+ G+GM WSDPN+GGWGGEE +SSYGE+
Sbjct: 469 APHVNPAFFGRGMPVNGMGMMPGSGMDGPNMGMWSDPNMGGWGGEEPGGGKAGESSYGEE 528
Query: 345 AASDQQYGEGSHG--------KERIAERDRYGAPERRHE------------KEKEMGSGQ 464
AASD QYGE SH K+R +ERD G ERR+ KEK+MG
Sbjct: 529 AASDHQYGEVSHDRAGWPMREKDRGSERDWSGTSERRYRDDRDQGYDRDAPKEKDMGHDH 588
Query: 465 DWQERKHRDERERDSGREK 521
+W ER+HRD+RE +GRE+
Sbjct: 589 EWSERRHRDDRE--TGRER 605
>gb|ESW18634.1| hypothetical protein PHAVU_006G057100g [Phaseolus vulgaris]
Length = 691
Score = 126 bits (317), Expect = 1e-26
Identities = 81/202 (40%), Positives = 101/202 (50%), Gaps = 49/202 (24%)
Frame = +3
Query: 66 PPVLHPGAMIGQGFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFP-------PVV 224
PP++HP +M+ QGFD SFP P V
Sbjct: 416 PPLMHPQSMMSQGFDPAFGGPMGRMGSYGGFPGGPTPPFSGLLP---SFPGVGGVGLPGV 472
Query: 225 APHVNPAFFGRGLAPGG-------------VGMWSDPNLGGWGGEE-------QSSYGED 344
APHVNPAFFGRG+ G +GMWSDPN+GGWGGEE +SSYGE+
Sbjct: 473 APHVNPAFFGRGMPVNGMGMMPTSGMDGPNMGMWSDPNMGGWGGEEPGGGKAGESSYGEE 532
Query: 345 AASDQQYGEGSHG--------KERIAERDRYGAPERRHE------------KEKEMGSGQ 464
AASD QYGE SH K+R +ERD G+ ERR+ +EKEMG
Sbjct: 533 AASDHQYGEVSHDRAGWPMREKDRGSERDWSGSSERRYRDDRDQGYERDAPREKEMGHDP 592
Query: 465 DWQERKHRDERE--RDSGREKE 524
+W ER+HRD+RE R+ R++E
Sbjct: 593 EWSERRHRDDRETVRERSRDRE 614
>ref|XP_006586581.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like [Glycine max]
Length = 659
Score = 125 bits (314), Expect = 3e-26
Identities = 81/199 (40%), Positives = 99/199 (49%), Gaps = 47/199 (23%)
Frame = +3
Query: 66 PPVLHPGAMIGQGFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFP-------PVV 224
PP+LHP +M+ QGFD SFP P V
Sbjct: 378 PPMLHPQSMMNQGFDPAFGGPMGRMGGYGGFPGAPTPPFSGILP---SFPGVGGVGLPGV 434
Query: 225 APHVNPAFFGRGLAPGGVGM-------------WSDPNLGGWGGEE-------QSSYGED 344
APHVNPAFFGRG+ G+GM WSDPN+GGWGGEE +SSYGE+
Sbjct: 435 APHVNPAFFGRGMPVNGMGMMPGSGMDGPNMGMWSDPNMGGWGGEEPGGGKAGESSYGEE 494
Query: 345 AASDQQYGEGSHG--------KERIAERDRYGAPERRHE------------KEKEMGSGQ 464
AASD QYGE SH K+R +ERD G ERR+ KE++MG
Sbjct: 495 AASDHQYGEVSHDRAGWPMREKDRGSERDWSGTSERRYRDDRDQGYERDAPKEEDMGHDH 554
Query: 465 DWQERKHRDERERDSGREK 521
+W ER+HRD+RE +GRE+
Sbjct: 555 EWSERRHRDDRE--TGRER 571