BLASTX nr result
ID: Zingiber23_contig00014900
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00014900
(298 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004960961.1| PREDICTED: histone deacetylase HDT2-like [Se... 85 9e-15
ref|XP_002270966.2| PREDICTED: histone deacetylase HDT1-like [Vi... 85 1e-14
emb|CBI17088.3| unnamed protein product [Vitis vinifera] 85 1e-14
gb|EMJ06874.1| hypothetical protein PRUPE_ppa009583mg [Prunus pe... 84 3e-14
emb|CBI29370.3| unnamed protein product [Vitis vinifera] 83 3e-14
ref|XP_002277422.1| PREDICTED: histone deacetylase HDT1-like [Vi... 82 6e-14
gb|EMT09079.1| Histone deacetylase HDT2 [Aegilops tauschii] 80 3e-13
gb|EMS49621.1| Histone deacetylase HDT1 [Triticum urartu] 80 3e-13
gb|ABG43091.1| histone deacetylase HDAC2 [Triticum aestivum] 80 3e-13
ref|XP_003567379.1| PREDICTED: uncharacterized protein LOC100837... 80 4e-13
gb|ACF81501.1| unknown [Zea mays] gi|413950328|gb|AFW82977.1| hi... 79 8e-13
dbj|BAK02129.1| predicted protein [Hordeum vulgare subsp. vulgar... 78 1e-12
gb|ACD50315.1| histone deacetylase HD2 isoform 1 [Hordeum vulgare] 78 1e-12
emb|CBI30241.3| unnamed protein product [Vitis vinifera] 77 2e-12
ref|XP_002441441.1| hypothetical protein SORBIDRAFT_09g026730 [S... 77 2e-12
ref|XP_006338944.1| PREDICTED: histone deacetylase HDT1-like [So... 77 3e-12
ref|XP_004249622.1| PREDICTED: histone deacetylase HDT1-like [So... 77 3e-12
gb|AAW57802.1| putative histone deacetylase HD2 [Oryza sativa Ja... 77 3e-12
gb|AAF70196.1|AF255711_1 putative histone deacetylase HD2 [Oryza... 77 3e-12
gb|AFW82976.1| hypothetical protein ZEAMMB73_070282, partial [Ze... 77 3e-12
>ref|XP_004960961.1| PREDICTED: histone deacetylase HDT2-like [Setaria italica]
Length = 304
Score = 85.1 bits (209), Expect = 9e-15
Identities = 50/76 (65%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
Frame = +1
Query: 73 RLADSASKTPVPEKKAKLVSPGGNQKTGADGKK-VVHVATPYPAKQGKTPANSGDKSKQQ 249
R A++A KTPV +KKAK+ +P G QKTG GKK V HVATP+PAK KTPAN+ DKSK++
Sbjct: 217 RAAENALKTPVSDKKAKVATPSG-QKTG--GKKGVTHVATPHPAK--KTPANN-DKSKEK 270
Query: 250 APKSTGPVACKSCSKT 297
+PKS G V CKSCSKT
Sbjct: 271 SPKSGGSVPCKSCSKT 286
>ref|XP_002270966.2| PREDICTED: histone deacetylase HDT1-like [Vitis vinifera]
Length = 300
Score = 84.7 bits (208), Expect = 1e-14
Identities = 52/77 (67%), Positives = 58/77 (75%), Gaps = 2/77 (2%)
Frame = +1
Query: 73 RLADSASKTPVPEKKAKLVSPGGNQKTGADGKKV-VHVATPYPAKQ-GKTPANSGDKSKQ 246
R +SA+KTPVP KKAKLVSP QKT DGKK H ATP+P K+ GKTPA SGDK K
Sbjct: 212 RPTESATKTPVPAKKAKLVSP---QKT--DGKKGGAHTATPHPNKKAGKTPA-SGDKGKG 265
Query: 247 QAPKSTGPVACKSCSKT 297
Q+PKS G V+CKSCSKT
Sbjct: 266 QSPKSGGQVSCKSCSKT 282
>emb|CBI17088.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 84.7 bits (208), Expect = 1e-14
Identities = 52/77 (67%), Positives = 58/77 (75%), Gaps = 2/77 (2%)
Frame = +1
Query: 73 RLADSASKTPVPEKKAKLVSPGGNQKTGADGKKV-VHVATPYPAKQ-GKTPANSGDKSKQ 246
R +SA+KTPVP KKAKLVSP QKT DGKK H ATP+P K+ GKTPA SGDK K
Sbjct: 265 RPTESATKTPVPAKKAKLVSP---QKT--DGKKGGAHTATPHPNKKAGKTPA-SGDKGKG 318
Query: 247 QAPKSTGPVACKSCSKT 297
Q+PKS G V+CKSCSKT
Sbjct: 319 QSPKSGGQVSCKSCSKT 335
>gb|EMJ06874.1| hypothetical protein PRUPE_ppa009583mg [Prunus persica]
Length = 286
Score = 83.6 bits (205), Expect = 3e-14
Identities = 47/73 (64%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Frame = +1
Query: 82 DSASKTPVPEKKAKLVSPGGNQKTGADGKKVVHVATPYPAKQ-GKTPANSGDKSKQQAPK 258
+SASKTPVP KKAK V+P QKT DGKK H ATP+PAK+ GKTPA +GDK+K Q PK
Sbjct: 202 ESASKTPVPAKKAKQVTP---QKT--DGKKAAHTATPHPAKKGGKTPA-TGDKAKPQTPK 255
Query: 259 STGPVACKSCSKT 297
S G +CK CSK+
Sbjct: 256 SVGEHSCKPCSKS 268
>emb|CBI29370.3| unnamed protein product [Vitis vinifera]
Length = 110
Score = 83.2 bits (204), Expect = 3e-14
Identities = 48/77 (62%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Frame = +1
Query: 73 RLADSASKTPVPEKKAKLVSPGGNQKTGADGKKV-VHVATPYPAKQ-GKTPANSGDKSKQ 246
R +SA+KTPVP KKAKLVSP DGKK H ATP+P K+ GKTPA +GDK K+
Sbjct: 22 RPTESATKTPVPAKKAKLVSP-----QNTDGKKGGAHTATPHPNKKAGKTPA-TGDKGKE 75
Query: 247 QAPKSTGPVACKSCSKT 297
Q+PKS G V+CKSCSKT
Sbjct: 76 QSPKSGGQVSCKSCSKT 92
>ref|XP_002277422.1| PREDICTED: histone deacetylase HDT1-like [Vitis vinifera]
Length = 307
Score = 82.4 bits (202), Expect = 6e-14
Identities = 47/77 (61%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
Frame = +1
Query: 73 RLADSASKTPVPEKKAKLVSPGGNQKTGADGKKVV-HVATPYPAKQ-GKTPANSGDKSKQ 246
R +S SKTPVP+KKAK V+P QKTG D KK HVATPYP+KQ GKTPAN+ +K KQ
Sbjct: 216 RPTESVSKTPVPDKKAKFVTP---QKTGDDDKKSGGHVATPYPSKQAGKTPANT-EKPKQ 271
Query: 247 QAPKSTGPVACKSCSKT 297
Q KS G +CKSC+++
Sbjct: 272 QVQKSGGSFSCKSCNRS 288
>gb|EMT09079.1| Histone deacetylase HDT2 [Aegilops tauschii]
Length = 296
Score = 80.1 bits (196), Expect = 3e-13
Identities = 47/76 (61%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = +1
Query: 73 RLADSASKTPVPEKKAKLVSPGGNQKTGADGKKVVHVATPYPAKQ-GKTPANSGDKSKQQ 249
R A S KTPV +KKAK+ +P G QKTG D K VHVATP+PAK+ GKTPA S ++
Sbjct: 210 RAAGSVLKTPVTDKKAKIATPSG-QKTG-DKKGAVHVATPHPAKKAGKTPATS-----EK 262
Query: 250 APKSTGPVACKSCSKT 297
+PKS G VACKSCSKT
Sbjct: 263 SPKSGGSVACKSCSKT 278
>gb|EMS49621.1| Histone deacetylase HDT1 [Triticum urartu]
Length = 333
Score = 80.1 bits (196), Expect = 3e-13
Identities = 50/76 (65%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = +1
Query: 73 RLADSASKTPVPEKKAKLVSPGGNQKTGADGKKVVHVATPYPAKQ-GKTPANSGDKSKQQ 249
R A S KTPV +KKAK+ +P G QKTG D K VHVATP+PAK+ GKTPA S DKS
Sbjct: 247 RAAGSVLKTPVTDKKAKIATPSG-QKTG-DKKGAVHVATPHPAKKAGKTPATS-DKS--- 300
Query: 250 APKSTGPVACKSCSKT 297
PKS G VACKSCSKT
Sbjct: 301 -PKSGGSVACKSCSKT 315
>gb|ABG43091.1| histone deacetylase HDAC2 [Triticum aestivum]
Length = 310
Score = 80.1 bits (196), Expect = 3e-13
Identities = 47/76 (61%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = +1
Query: 73 RLADSASKTPVPEKKAKLVSPGGNQKTGADGKKVVHVATPYPAKQ-GKTPANSGDKSKQQ 249
R A S KTPV +KKAK+ +P G QKTG D K VHVATP+PAK+ GKTPA S ++
Sbjct: 224 RAAGSVLKTPVTDKKAKIATPSG-QKTG-DKKGAVHVATPHPAKKAGKTPATS-----EK 276
Query: 250 APKSTGPVACKSCSKT 297
+PKS G VACKSCSKT
Sbjct: 277 SPKSGGSVACKSCSKT 292
>ref|XP_003567379.1| PREDICTED: uncharacterized protein LOC100837781 [Brachypodium
distachyon]
Length = 295
Score = 79.7 bits (195), Expect = 4e-13
Identities = 46/76 (60%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Frame = +1
Query: 73 RLADSASKTPVPEKKAKLVSPGGNQKTGADGKKVVHVATPYPAKQGKTPANSGDKSKQQA 252
R+A +A K P +KKAK+ +P G QKT D KK HV TP+PAKQ KTPANS K ++
Sbjct: 210 RVAATALKAPASDKKAKIATPSG-QKT--DDKKATHVTTPHPAKQAKTPANSKPK---KS 263
Query: 253 PKST-GPVACKSCSKT 297
PKST G VACKSCSKT
Sbjct: 264 PKSTGGTVACKSCSKT 279
>gb|ACF81501.1| unknown [Zea mays] gi|413950328|gb|AFW82977.1| histone deacetylase
HDT2 [Zea mays]
Length = 303
Score = 78.6 bits (192), Expect = 8e-13
Identities = 47/76 (61%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
Frame = +1
Query: 73 RLADSASKTPVPEKKAKLVSPGGNQKTGADGKK-VVHVATPYPAKQGKTPANSGDKSKQQ 249
R A++A KTP+ +KKAK+ +P QKTG GKK HVATP+PAK GKTPAN+ DKS ++
Sbjct: 215 RGAENALKTPLSDKKAKVATPPA-QKTG--GKKGATHVATPHPAK-GKTPANN-DKSTEK 269
Query: 250 APKSTGPVACKSCSKT 297
+PKS G V CKSCSKT
Sbjct: 270 SPKSGGSVPCKSCSKT 285
>dbj|BAK02129.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326498741|dbj|BAK02356.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 310
Score = 78.2 bits (191), Expect = 1e-12
Identities = 49/76 (64%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = +1
Query: 73 RLADSASKTPVPEKKAKLVSPGGNQKTGADGKKVVHVATPYPAKQ-GKTPANSGDKSKQQ 249
R A S KTPV +KKAK+ +P G QKTG D K VHVATP+PAK+ GKTPA S DKS
Sbjct: 224 RAAGSDIKTPVADKKAKIATPSG-QKTG-DKKGAVHVATPHPAKKVGKTPATS-DKS--- 277
Query: 250 APKSTGPVACKSCSKT 297
PKS G VACKSC+KT
Sbjct: 278 -PKSGGSVACKSCTKT 292
>gb|ACD50315.1| histone deacetylase HD2 isoform 1 [Hordeum vulgare]
Length = 310
Score = 78.2 bits (191), Expect = 1e-12
Identities = 49/76 (64%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = +1
Query: 73 RLADSASKTPVPEKKAKLVSPGGNQKTGADGKKVVHVATPYPAKQ-GKTPANSGDKSKQQ 249
R A S KTPV +KKAK+ +P G QKTG D K VHVATP+PAK+ GKTPA S DKS
Sbjct: 224 RAAGSDIKTPVADKKAKIATPSG-QKTG-DKKGAVHVATPHPAKKVGKTPATS-DKS--- 277
Query: 250 APKSTGPVACKSCSKT 297
PKS G VACKSC+KT
Sbjct: 278 -PKSGGSVACKSCTKT 292
>emb|CBI30241.3| unnamed protein product [Vitis vinifera]
Length = 149
Score = 77.4 bits (189), Expect = 2e-12
Identities = 43/77 (55%), Positives = 54/77 (70%), Gaps = 2/77 (2%)
Frame = +1
Query: 73 RLADSASKTPVPEKKAKLVSPGGNQKTGADGKKVV-HVATPYPAKQ-GKTPANSGDKSKQ 246
R +S SKTPVP+KKAK V+P +D KK HVATPYP+KQ GKTPAN+ +K KQ
Sbjct: 55 RPTESVSKTPVPDKKAKFVTPQKTDGKKSDDKKSGGHVATPYPSKQAGKTPANT-EKPKQ 113
Query: 247 QAPKSTGPVACKSCSKT 297
Q KS G +CKSC+++
Sbjct: 114 QVQKSGGSFSCKSCNRS 130
>ref|XP_002441441.1| hypothetical protein SORBIDRAFT_09g026730 [Sorghum bicolor]
gi|241946726|gb|EES19871.1| hypothetical protein
SORBIDRAFT_09g026730 [Sorghum bicolor]
Length = 299
Score = 77.0 bits (188), Expect = 2e-12
Identities = 45/70 (64%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
Frame = +1
Query: 91 SKTPVPEKKAKLVSPGGNQKTGADGKK-VVHVATPYPAKQGKTPANSGDKSKQQAPKSTG 267
S TP+ +KKAK+ +P QKTG GKK VHVATP+PAK GKTPAN+ DKSK+++PKS G
Sbjct: 217 SLTPLSDKKAKVATPSA-QKTG--GKKGAVHVATPHPAK-GKTPANN-DKSKEKSPKSGG 271
Query: 268 PVACKSCSKT 297
V CKSC+KT
Sbjct: 272 SVPCKSCTKT 281
>ref|XP_006338944.1| PREDICTED: histone deacetylase HDT1-like [Solanum tuberosum]
Length = 287
Score = 76.6 bits (187), Expect = 3e-12
Identities = 45/77 (58%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Frame = +1
Query: 73 RLADSASKTPVPEKKAKLVSPGGNQKTGADGKK-VVHVATPYPAKQ-GKTPANSGDKSKQ 246
R ADSA+KTPVP+KK K ++P QKT DGKK VHVATP+P+KQ GKTP N
Sbjct: 201 RPADSAAKTPVPDKKTKFLTP---QKT--DGKKGAVHVATPHPSKQAGKTPGN----KPN 251
Query: 247 QAPKSTGPVACKSCSKT 297
Q PKS G +ACK+C++T
Sbjct: 252 QTPKSGGSLACKTCNRT 268
>ref|XP_004249622.1| PREDICTED: histone deacetylase HDT1-like [Solanum lycopersicum]
Length = 287
Score = 76.6 bits (187), Expect = 3e-12
Identities = 45/77 (58%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Frame = +1
Query: 73 RLADSASKTPVPEKKAKLVSPGGNQKTGADGKK-VVHVATPYPAKQ-GKTPANSGDKSKQ 246
R ADSA+KTPVP+KK K ++P QKT DGKK VHVATP+P+KQ GKTP N
Sbjct: 201 RPADSAAKTPVPDKKTKFLTP---QKT--DGKKGAVHVATPHPSKQAGKTPGN----KPN 251
Query: 247 QAPKSTGPVACKSCSKT 297
Q PKS G +ACK+C++T
Sbjct: 252 QTPKSGGSLACKTCNRT 268
>gb|AAW57802.1| putative histone deacetylase HD2 [Oryza sativa Japonica Group]
Length = 274
Score = 76.6 bits (187), Expect = 3e-12
Identities = 45/77 (58%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
Frame = +1
Query: 73 RLADSASKTPVPEKKAKLVSPGGNQKTGADGKKVVHVATPYPAKQ-GKTPANSGDKSKQQ 249
++A+ KTP +KKAK+ +P G QKTG KK VHVATP+PAKQ KTP N DKSK++
Sbjct: 185 KVAEIVLKTPSSDKKAKIATPSG-QKTG--DKKGVHVATPHPAKQASKTPVN--DKSKEK 239
Query: 250 APKS-TGPVACKSCSKT 297
+PKS G ++CKSCSKT
Sbjct: 240 SPKSGGGSISCKSCSKT 256
>gb|AAF70196.1|AF255711_1 putative histone deacetylase HD2 [Oryza sativa]
Length = 297
Score = 76.6 bits (187), Expect = 3e-12
Identities = 45/77 (58%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
Frame = +1
Query: 73 RLADSASKTPVPEKKAKLVSPGGNQKTGADGKKVVHVATPYPAKQ-GKTPANSGDKSKQQ 249
++A+ KTP +KKAK+ +P G QKTG KK VHVATP+PAKQ KTP N DKSK++
Sbjct: 208 KVAEIVLKTPSSDKKAKIATPSG-QKTG--DKKGVHVATPHPAKQASKTPVN--DKSKEK 262
Query: 250 APKS-TGPVACKSCSKT 297
+PKS G ++CKSCSKT
Sbjct: 263 SPKSGGGSISCKSCSKT 279
>gb|AFW82976.1| hypothetical protein ZEAMMB73_070282, partial [Zea mays]
Length = 167
Score = 76.6 bits (187), Expect = 3e-12
Identities = 46/75 (61%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Frame = +1
Query: 73 RLADSASKTPVPEKKAKLVSPGGNQKTGADGKK-VVHVATPYPAKQGKTPANSGDKSKQQ 249
R A++A KTP+ +KKAK+ +P QKTG GKK HVATP+PAK GKTPAN+ DKS ++
Sbjct: 98 RGAENALKTPLSDKKAKVATPPA-QKTG--GKKGATHVATPHPAK-GKTPANN-DKSTEK 152
Query: 250 APKSTGPVACKSCSK 294
+PKS G V CKSCSK
Sbjct: 153 SPKSGGSVPCKSCSK 167