BLASTX nr result

ID: Zingiber23_contig00014617 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00014617
         (366 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADL36827.1| SPL domain class transcription factor [Malus dome...    59   5e-07
gb|ACN35189.1| unknown [Zea mays]                                      57   3e-06
gb|AGI62049.1| SQUAMOSA promoter-binding-like 1 [Erycina pusilla]      56   4e-06
ref|XP_002282598.1| PREDICTED: squamosa promoter-binding-like pr...    56   4e-06
ref|XP_006447265.1| hypothetical protein CICLE_v10016841mg [Citr...    55   7e-06
ref|XP_006447264.1| hypothetical protein CICLE_v10016841mg [Citr...    55   7e-06

>gb|ADL36827.1| SPL domain class transcription factor [Malus domestica]
          Length = 188

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 27/48 (56%), Positives = 37/48 (77%), Gaps = 3/48 (6%)
 Frame = +3

Query: 177 KRRLAAKRGSGSCG---VTRCQADKCTADLTEEKRYNCRHKVCEVHSK 311
           KR L++   SG  G   + RCQAD+CTADL+EEK+Y+ +HKVC++HSK
Sbjct: 45  KRSLSSSSSSGGGGGGAMRRCQADRCTADLSEEKQYHRKHKVCDLHSK 92


>gb|ACN35189.1| unknown [Zea mays]
          Length = 223

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/47 (57%), Positives = 30/47 (63%)
 Frame = -3

Query: 364 LHC*QTLCRRPATTTAAALECTSQTLCRQLYRFSSVRSAVHLSAWHL 224
           LHC Q   RRPA  T  AL C S TLC +LYRFS+  SA+H S W L
Sbjct: 66  LHCWQKRWRRPARRTTDALRCASHTLCLRLYRFSTPMSALHRSTWQL 112


>gb|AGI62049.1| SQUAMOSA promoter-binding-like 1 [Erycina pusilla]
          Length = 169

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 27/39 (69%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
 Frame = +3

Query: 198 RGSGSCGVTR-CQADKCTADLTEEKRYNCRHKVCEVHSK 311
           RGSG  G    CQA+KCTADLTE KRY+ RHKVCE H+K
Sbjct: 47  RGSGCGGAYPICQAEKCTADLTEAKRYHRRHKVCEAHAK 85


>ref|XP_002282598.1| PREDICTED: squamosa promoter-binding-like protein 4 [Vitis
           vinifera] gi|302142976|emb|CBI20271.3| unnamed protein
           product [Vitis vinifera]
          Length = 204

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/40 (60%), Positives = 30/40 (75%)
 Frame = +3

Query: 192 AKRGSGSCGVTRCQADKCTADLTEEKRYNCRHKVCEVHSK 311
           ++ G G  G   CQA+KC ADLT+ KRY+ RHKVCEVH+K
Sbjct: 72  SRSGGGGVGSPCCQAEKCGADLTDAKRYHRRHKVCEVHAK 111


>ref|XP_006447265.1| hypothetical protein CICLE_v10016841mg [Citrus clementina]
           gi|568831265|ref|XP_006469892.1| PREDICTED: squamosa
           promoter-binding-like protein 4-like isoform X1 [Citrus
           sinensis] gi|557549876|gb|ESR60505.1| hypothetical
           protein CICLE_v10016841mg [Citrus clementina]
          Length = 189

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/39 (58%), Positives = 29/39 (74%)
 Frame = +3

Query: 195 KRGSGSCGVTRCQADKCTADLTEEKRYNCRHKVCEVHSK 311
           K  SG  G+  CQ DKC ADL++ K+Y+ RHKVCEVH+K
Sbjct: 54  KGSSGGSGLRSCQVDKCAADLSDAKQYHRRHKVCEVHAK 92


>ref|XP_006447264.1| hypothetical protein CICLE_v10016841mg [Citrus clementina]
           gi|557549875|gb|ESR60504.1| hypothetical protein
           CICLE_v10016841mg [Citrus clementina]
          Length = 173

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/39 (58%), Positives = 29/39 (74%)
 Frame = +3

Query: 195 KRGSGSCGVTRCQADKCTADLTEEKRYNCRHKVCEVHSK 311
           K  SG  G+  CQ DKC ADL++ K+Y+ RHKVCEVH+K
Sbjct: 54  KGSSGGSGLRSCQVDKCAADLSDAKQYHRRHKVCEVHAK 92


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