BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00014327
         (1368 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK07775.1| predicted protein [Hordeum vulgare subsp. vulgare]     69   6e-09
ref|XP_004969517.1| PREDICTED: pentatricopeptide repeat-containi...    68   8e-09
gb|EMT04525.1| hypothetical protein F775_19583 [Aegilops tauschii]     65   5e-08
gb|AFW83548.1| hypothetical protein ZEAMMB73_840071 [Zea mays]         63   3e-07
ref|XP_002456122.1| hypothetical protein SORBIDRAFT_03g030920 [S...    62   6e-07
ref|XP_003566988.1| PREDICTED: pentatricopeptide repeat-containi...    59   5e-06
ref|XP_006646195.1| PREDICTED: pentatricopeptide repeat-containi...    58   8e-06

>dbj|BAK07775.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 969

 Score = 68.6 bits (166), Expect = 6e-09
 Identities = 50/181 (27%), Positives = 76/181 (41%), Gaps = 5/181 (2%)
 Frame = +3

Query: 204 NRPMGLLGSGDCRSFSRNAWPNVSSFQGISILPRRFLGXXXXXXXXXXXXXXXGGSSKGR 383
           N  MGLL  G C     +  PN S+  G  ++PRR +                       
Sbjct: 7   NASMGLLNLGGCGVLLPSLQPNSSAGHGF-LVPRRDVSALPLSWGLVRRGRVLDAGFGAA 65

Query: 384 IFCAFEDMGSVSASSRFLEKEFTFTPAFDDYVKVLESVRTDRSRHTGDGEEEGSKKRPVN 563
              A  + G+ S+  R +EKE TF+P F DYVK++ESV+ DRS+    G+ +G   R   
Sbjct: 66  GALASGEAGAGSSELRHIEKELTFSPTFTDYVKMMESVKLDRSKSLQGGDSDGRSSRRRF 125

Query: 564 KGKSFR-----MKQQHRSVRNDDSKQRPNAVENSSRSERVAVRGRNKDLEDATRSITNRS 728
            G   R     +  + +S       QR     +  R ER+ + GR ++       + N S
Sbjct: 126 DGDGRREDRESIDPRKKSFERKTGSQRERG-RDQGRGERLPMNGRTEEFTGLVGDVKNSS 184

Query: 729 E 731
           +
Sbjct: 185 D 185


>ref|XP_004969517.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
           chloroplastic-like [Setaria italica]
          Length = 967

 Score = 68.2 bits (165), Expect = 8e-09
 Identities = 53/181 (29%), Positives = 78/181 (43%), Gaps = 4/181 (2%)
 Frame = +3

Query: 204 NRPMGLLGSGDCRSFSRNAWPNVSSFQGISILPRRFLGXXXXXXXXXXXXXXXGGSSKGR 383
           N  MGLL    C S      PN S  +G S+  R                      + G 
Sbjct: 6   NASMGLLSLSGCGSLLPTPQPNSSQGRGFSVPGRSVSVLPLRWGLARKRGRVLDSRTDGA 65

Query: 384 IFCAFEDMGSVSASSRFLEKEFTFTPAFDDYVKVLESVRTDRSR--HTGDGEEEGSKKRP 557
           +  A  + G+ S+  R +EKE TF+P F DYVK++ESV+ DRS+  H  D +   S++R 
Sbjct: 66  V--AGGESGAGSSELRHIEKELTFSPTFTDYVKIMESVKLDRSKNLHGSDSDSRSSRRRF 123

Query: 558 VNKGKSFRMKQQHRSVRNDDSKQRPNAVENSSRSERVAVRGRNKDL--EDATRSITNRSE 731
              G       +H   R+ D++ +P       R  R +  GR   L  +D  + +T   E
Sbjct: 124 TGDG------DRHGDGRSGDARNKPFERNQGPRRNRRSDIGRVVKLAKDDNQKDVTGFVE 177

Query: 732 R 734
           R
Sbjct: 178 R 178


>gb|EMT04525.1| hypothetical protein F775_19583 [Aegilops tauschii]
          Length = 901

 Score = 65.5 bits (158), Expect = 5e-08
 Identities = 61/218 (27%), Positives = 87/218 (39%), Gaps = 24/218 (11%)
 Frame = +3

Query: 213 MGLLGSGDCRSFSRNAWPNVSSFQGISILPRRFLGXXXXXXXXXXXXXXXGGSSKGRIFC 392
           MGLL  G C  F  +  PN SS     + PRR +                G +       
Sbjct: 10  MGLLNLGGCGVFLPSLQPN-SSAGHCFLAPRRDVSALGLVRRGRFLDAGFGAAGA----L 64

Query: 393 AFEDMGSVSASSRFLEKEFTFTPAFDDYVKVLESVRTDRS---------------RHTGD 527
           A  + G+ S+  R +EKE TF+P F DYVK++ESV+ DRS               R TGD
Sbjct: 65  ASGEAGAGSSELRHIEKELTFSPTFTDYVKMMESVKLDRSKSLQGGDSDGRSSRRRFTGD 124

Query: 528 GEE----EGSKKRPVNKGKSFRMKQQHRSVRNDDSKQRPNAVENSSRSERVAVRGRN--- 686
           G+      G ++    + KSF   +  +  R  D  +      N S  E   + G+    
Sbjct: 125 GDASAGGRGDRESVDPRKKSFERNRGAQRDRGGDQVRGGRLAMNDSAEEFTGLVGKGMVG 184

Query: 687 --KDLEDATRSITNRSERFSVRVRTKDLEDATGSKRNK 794
             K+  D  R +    +R  VR     + D+T S   K
Sbjct: 185 DVKNSSDGQRKVEEYVQRRIVRGERSRIGDSTDSDDRK 222


>gb|AFW83548.1| hypothetical protein ZEAMMB73_840071 [Zea mays]
          Length = 956

 Score = 63.2 bits (152), Expect = 3e-07
 Identities = 58/209 (27%), Positives = 84/209 (40%), Gaps = 23/209 (11%)
 Frame = +3

Query: 204 NRPMGLLGSGDCRSFSRNAWPNVSSFQGISILPRRFLGXXXXXXXXXXXXXXXGGSSKGR 383
           N  MG L  G C +      PN    +G SI  R                      S G 
Sbjct: 6   NASMGPLSLGGCGALLSTPQPNSWHCRGFSIPERSVFMLPLRRGLSRKRGWVLDSRSNGA 65

Query: 384 IFCAFEDMGSVSASSRFLEKEFTFTPAFDDYVKVLESVRTDRS-------------RHTG 524
           +  A +++G+ S+  R +EKE TF+P F DYVK++ESV+ DRS             R  G
Sbjct: 66  V--ARDEVGAGSSELRHIEKELTFSPTFTDYVKIMESVKLDRSKNLHGADGQSLRRRFAG 123

Query: 525 DGEEEGSKKRPVNKGKSFRMKQ--QHRSVRNDDSKQRPNAVENSSRSERVAVRGRNKDLE 698
           DG +   +     + KSF   Q  Q    ++++ K     V+  +     +   R  ++E
Sbjct: 124 DGRQRNRRSGDA-RNKSFERNQGPQRDLAKDENQKDVTGFVDKRATGHVKSSNRRQGEVE 182

Query: 699 D-ATRSITNRSER-------FSVRVRTKD 761
           D A R I     R       FS  V+ KD
Sbjct: 183 DYAQRRIIRGGTRGNGDNGQFSSPVKAKD 211


>ref|XP_002456122.1| hypothetical protein SORBIDRAFT_03g030920 [Sorghum bicolor]
           gi|241928097|gb|EES01242.1| hypothetical protein
           SORBIDRAFT_03g030920 [Sorghum bicolor]
          Length = 937

 Score = 62.0 bits (149), Expect = 6e-07
 Identities = 49/182 (26%), Positives = 80/182 (43%), Gaps = 7/182 (3%)
 Frame = +3

Query: 204 NRPMGLLGSGDCRSFSRNAWPNVSSFQGISILPRRFLGXXXXXXXXXXXXXXXGGSSKGR 383
           N  MGLL  G C +      PN    +G  ++P R L                    KGR
Sbjct: 6   NASMGLLSLGGCGALLPTPQPNSCHGRGF-LVPERSLSMLPLRWGL--------SRKKGR 56

Query: 384 IFCAFED-------MGSVSASSRFLEKEFTFTPAFDDYVKVLESVRTDRSRHTGDGEEEG 542
           +  +  D       +G+ S+  R +EKE TF+P F DYVK++ESV+ DRS++    + +G
Sbjct: 57  VLDSRSDGAVAGGGVGTGSSELRHIEKELTFSPTFTDYVKIMESVKLDRSKNIHGADSDG 116

Query: 543 SKKRPVNKGKSFRMKQQHRSVRNDDSKQRPNAVENSSRSERVAVRGRNKDLEDATRSITN 722
              R     + F    +  + R+ D++ +P   E +    R   +  N+  +D T  +  
Sbjct: 117 RSSR-----RRFTGDDRRTNRRSGDARNKP--FERNQGPRRDLTKDENQ--KDVTGFVDK 167

Query: 723 RS 728
           R+
Sbjct: 168 RA 169


>ref|XP_003566988.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
           chloroplastic-like [Brachypodium distachyon]
          Length = 976

 Score = 58.9 bits (141), Expect = 5e-06
 Identities = 57/191 (29%), Positives = 84/191 (43%), Gaps = 51/191 (26%)
 Frame = +3

Query: 402 DMGSVSASSRFLEKEFTFTPAFDDYVKVLESVRTDRSRHTGDGEEEG--SKKRPVNKG-- 569
           + G+ S+  R +EKE TF+P F DYVK++ESV+ DRS+ +  G+ +G  S++R V  G  
Sbjct: 69  EAGTGSSELRHIEKELTFSPTFTDYVKMMESVKLDRSKSSQGGDSDGRSSRRRFVGDGDA 128

Query: 570 ---------------KSFRMK------------QQHRSVRNDDSKQRPNAV--------E 644
                          +SF  K            ++ RS  ND +K     V        E
Sbjct: 129 SVGRRVDRELGDPRNQSFERKRGAHRDRGSERGREERSANNDIAKNFTGLVERRMSTDAE 188

Query: 645 NSSRS--------ERVAVRGRNKDLEDATRSITNRSERFSVRVRTKDLED----ATGSKR 788
           NSS          +R  VRG      D+T +  N   +F+  V+TKD  D    + G++ 
Sbjct: 189 NSSYRQGKVEEYVQRRIVRGERSKTGDSTDN--NGRRQFASYVKTKDNRDSMVESAGNRH 246

Query: 789 NKSADRWGLDE 821
             S  R  L E
Sbjct: 247 AHSNARKDLQE 257


>ref|XP_006646195.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
            chloroplastic-like [Oryza brachyantha]
          Length = 1012

 Score = 58.2 bits (139), Expect = 8e-06
 Identities = 70/301 (23%), Positives = 111/301 (36%), Gaps = 3/301 (0%)
 Frame = +3

Query: 363  GGSSKGRIFCAFEDMGSVSASSRFLEKEFTFTPAFDDYVKVLESVRTDRSRHTGDGEEEG 542
            G  + G +  A  + G  S+  R +EK+ TF+P F DYVK++ESV+ DRS+     E +G
Sbjct: 65   GSGASGAV--ASGEGGPGSSGLRHIEKDLTFSPTFTDYVKIMESVKLDRSKSLQGHESDG 122

Query: 543  SKKRPVNKGKSFRMKQQHRSVRNDDSKQ---RPNAVENSSRSERVAVRGRNKDLEDATRS 713
            +  R     +SF        VR  D +    R  + +    ++R       + ++     
Sbjct: 123  NNSR-----RSFTGNDDAWVVRRGDGRSGDGRSKSFDERKGAQRNRGDANRRGMKLGNND 177

Query: 714  ITNRSERFSVRVRTKDLEDATGSKRNKSADRWGLDEGLLQKGAPRRKXXXXXXXXXXXXX 893
            I N S R    V  K L+D   S R          +G +++   RR              
Sbjct: 178  IQNNSTRL---VEKKMLDDVAKSHRR---------QGKVEEYVQRRIVRGERRENEGNGD 225

Query: 894  SRTLRKFHSQDKLYGTGGDAEGYYFVKGKVSHFERQMDISQKNRKVVGVDKLETSKGNXX 1073
                 KF SQ K+  T G    +   + K  H +     S + +K     K   S G   
Sbjct: 226  KSEHWKFTSQLKMKDTRGSLVAHQPERNK--HVQWNGPNSLRGQKASERSKHVLSNGRNS 283

Query: 1074 XXXXXXXXXXXXXRPRRSKPVSGELTESNSPWSSNDDLNGGIDDHRISYINGHHPNDSKV 1253
                            RS P S  + ES  P    +  N       +   N ++P + K+
Sbjct: 284  LPGQKSLIL------SRSPPNSRIILESTKPMVVREKENISRTSRSVQENNFNYPRERKI 337

Query: 1254 A 1256
            +
Sbjct: 338  S 338