BLASTX nr result

ID: Zingiber23_contig00013812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00013812
         (266 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521981.1| protein farnesyltransferase alpha subunit, p...    60   2e-07
ref|XP_003530146.1| PREDICTED: uncharacterized protein LOC100807...    57   3e-06

>ref|XP_002521981.1| protein farnesyltransferase alpha subunit, putative [Ricinus
           communis] gi|223538785|gb|EEF40385.1| protein
           farnesyltransferase alpha subunit, putative [Ricinus
           communis]
          Length = 431

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/87 (36%), Positives = 48/87 (55%)
 Frame = -3

Query: 264 EGDKLIDEIGFLGPSQFAXXXXXXXXXXXXQCTPIQLADVSLETNIAELNTVQYDKNFFW 85
           + D LIDE+GF+ PSQF               + +Q  D  L + I ++N + ++   FW
Sbjct: 25  DSDPLIDEVGFIHPSQFTALS-----------SELQAKDAILSSKIDKVNVLDHESTSFW 73

Query: 84  NRNNKLAISTDVLSHLYIAARHAYMYA 4
           NR++KL IS  V+  LY AA+ A+M A
Sbjct: 74  NRDHKLGISMHVILPLYTAAKDAFMNA 100


>ref|XP_003530146.1| PREDICTED: uncharacterized protein LOC100807426 isoform X1 [Glycine
           max] gi|571465985|ref|XP_006583528.1| PREDICTED:
           uncharacterized protein LOC100807426 isoform X2 [Glycine
           max]
          Length = 438

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
 Frame = -3

Query: 264 EGDKLIDEIGFLGPSQFAXXXXXXXXXXXXQCTPI-QLADVSLETNIAELNTVQYDKNFF 88
           E D LIDE+GF+ PSQF+                I Q AD      I+E ++ Q D  +F
Sbjct: 23  ESDALIDELGFIHPSQFSLLKEESDISSNLSDEAIHQSAD---RVVISEESSKQ-DNLYF 78

Query: 87  WNRNNKLAISTDVLSHLYIAARHAYM 10
           WNR++KL IST VL  LY AA+HA+M
Sbjct: 79  WNRDHKLGISTHVLLPLYRAAKHAFM 104


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