BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00013733
         (978 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGE44298.1| whirly transcription factor domain containing pro...   230   2e-60
ref|XP_003574931.1| PREDICTED: uncharacterized protein LOC100825...   200   6e-49
ref|NP_001045956.1| Os02g0158400 [Oryza sativa Japonica Group] g...   199   1e-48
ref|XP_006646903.1| PREDICTED: single-stranded DNA-binding prote...   198   3e-48
gb|AFW66475.1| DNA binding protein isoform 1 [Zea mays] gi|41392...   194   6e-47
gb|ACG35575.1| DNA binding protein [Zea mays]                         194   6e-47
gb|ACF85629.1| unknown [Zea mays] gi|323388661|gb|ADX60135.1| PB...   194   6e-47
ref|NP_001152589.1| LOC100286229 [Zea mays] gi|195657845|gb|ACG4...   191   5e-46
ref|XP_004951836.1| PREDICTED: single-stranded DNA-bindig protei...   189   1e-45
ref|XP_002453336.1| hypothetical protein SORBIDRAFT_04g004060 [S...   188   2e-45
pdb|4KOP|A Chain A, Crystal Structure Of Why2 From Arabidopsis T...   169   1e-39
gb|AAG51881.1|AC016162_2 unknown protein; 79476-81015 [Arabidops...   169   1e-39
ref|NP_177282.2| single-stranded DNA-binding protein WHY2 [Arabi...   169   1e-39
ref|XP_004250749.1| PREDICTED: single-stranded DNA-bindig protei...   169   2e-39
ref|NP_001275393.1| single-stranded DNA-bindig protein WHY2, mit...   169   2e-39
ref|XP_002888827.1| ATWHY2 [Arabidopsis lyrata subsp. lyrata] gi...   167   4e-39
ref|XP_006836884.1| hypothetical protein AMTR_s00099p00109140 [A...   167   6e-39
gb|AFK37234.1| unknown [Lotus japonicus]                              167   7e-39
ref|XP_006302759.1| hypothetical protein CARUB_v10020880mg [Caps...   164   4e-38
ref|XP_006302758.1| hypothetical protein CARUB_v10020880mg [Caps...   164   4e-38

>gb|AGE44298.1| whirly transcription factor domain containing protein [Musa AB
           Group]
          Length = 245

 Score =  230 bits (586), Expect(2) = 2e-60
 Identities = 120/199 (60%), Positives = 142/199 (71%), Gaps = 13/199 (6%)
 Frame = -1

Query: 900 RFLA-SRTLGRAAEVKSPLWLI-MHGISTSGPDLVTDA-----------GSASFRRYAKY 760
           RFL+ S  L RA  VK   WL     ISTSGP LV D            GS+S RRY +Y
Sbjct: 6   RFLSCSSILERATNVKDSFWLSSQRSISTSGPGLVNDGSSSVRPPFSPTGSSSVRRYVEY 65

Query: 759 TVFKGKAALSLEPVLPTIREVDSRISRVFKRGCVVLKFYPAIALQKYDWKRRQVFALSPT 580
           TVFKGKAALS+ P+LPT REVDS +SRV K+GCV+L F+PAI  +KYDW+++Q FALSPT
Sbjct: 66  TVFKGKAALSVSPILPTFREVDSGVSRVHKKGCVILTFWPAIGQRKYDWQKKQAFALSPT 125

Query: 579 EAGNLIALGPDESCEFLHDPSLKSSLEGQVRKSLQVSPSANDKGYFLNLMVANKIQNTNE 400
           E G+LI LGP ESCEF HDPS+KSSLEGQV+KSL +SP  +  GY LNL V N IQ TNE
Sbjct: 126 EVGSLIGLGPAESCEFFHDPSMKSSLEGQVKKSLSISPLNDKAGYLLNLSVVNNIQKTNE 185

Query: 399 RLSISVTKAEFAVIRTILT 343
           R S+ V+KAEF  IRT+ +
Sbjct: 186 RFSLPVSKAEFTAIRTVFS 204



 Score = 30.4 bits (67), Expect(2) = 2e-60
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -3

Query: 340 WSQARRSQLPDTASNLHK-QFERRLDPASKW 251
           WSQA   Q P TA++  K Q E R DP+ +W
Sbjct: 213 WSQAASPQPPSTATHTPKEQIEERPDPSLEW 243


>ref|XP_003574931.1| PREDICTED: uncharacterized protein LOC100825843 [Brachypodium
           distachyon]
          Length = 231

 Score =  200 bits (509), Expect = 6e-49
 Identities = 108/208 (51%), Positives = 144/208 (69%), Gaps = 6/208 (2%)
 Frame = -1

Query: 906 LPRFLASRTLGRAAEVKSPLW----LIMHGISTSGPDLVTDAGSASFRRYAKYTVFKGKA 739
           L RFL S T  + +++K  LW       H +STS  ++  +A   S R++A YTVFKGKA
Sbjct: 4   LSRFLPS-TSRKVSDLKDVLWSGSVTFEHALSTSAANVDENA---SARKFASYTVFKGKA 59

Query: 738 ALSLEPVLPTIREVDSRISRVFKRGCVVLKFYPAIALQKYDWKRRQVFALSPTEAGNLIA 559
           ALS+ P+LP   +++S  SRV K G V+L F+PA+  ++YD+ ++Q+FALSPTE G+LI+
Sbjct: 60  ALSISPILPNFTKIESGGSRVKKNGSVMLTFFPAVGQRQYDYSKKQLFALSPTEVGSLIS 119

Query: 558 LGPDESCEFLHDPSLKSSLEGQVRKSLQVSPSANDKGYFLNLMVANKIQNTNERLSISVT 379
           LG  ESCEF HDPS+KSS EGQV+KSL ++P  ND GYF+N+ V N +Q TNERLS+ VT
Sbjct: 120 LGSAESCEFFHDPSMKSSHEGQVKKSLSITPLGNDNGYFVNITVLNNVQKTNERLSVPVT 179

Query: 378 KAEFAVIRTILTAG--HRPGDRNCLTLH 301
           KAEFAV+RT L+    H  G    LT H
Sbjct: 180 KAEFAVMRTALSYALPHIMGWDQALTSH 207


>ref|NP_001045956.1| Os02g0158400 [Oryza sativa Japonica Group]
           gi|50251252|dbj|BAD28032.1| putative Chain C, Structure
           Of The Plant Transcriptional Regulator Pbf-2 [Oryza
           sativa Japonica Group] gi|50252182|dbj|BAD28177.1|
           putative Chain C, Structure Of The Plant Transcriptional
           Regulator Pbf-2 [Oryza sativa Japonica Group]
           gi|113535487|dbj|BAF07870.1| Os02g0158400 [Oryza sativa
           Japonica Group] gi|215692593|dbj|BAG88013.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215704516|dbj|BAG94149.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215740785|dbj|BAG96941.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218190103|gb|EEC72530.1| hypothetical protein
           OsI_05924 [Oryza sativa Indica Group]
           gi|222622212|gb|EEE56344.1| hypothetical protein
           OsJ_05450 [Oryza sativa Japonica Group]
          Length = 228

 Score =  199 bits (506), Expect = 1e-48
 Identities = 109/216 (50%), Positives = 144/216 (66%), Gaps = 6/216 (2%)
 Frame = -1

Query: 915 LSALPRFLASRTLGRAAEVKSPLW----LIMHGISTSGPDLVTDAGSASFRRYAKYTVFK 748
           +  L RF+ S +  R  ++K  LW       H +ST   D  T     S R++A YTVFK
Sbjct: 1   MQRLSRFVPSSSR-RVTDLKDALWSGSLTFQHALSTFAADENT-----SGRKFASYTVFK 54

Query: 747 GKAALSLEPVLPTIREVDSRISRVFKRGCVVLKFYPAIALQKYDWKRRQVFALSPTEAGN 568
           GKAALS++P+LP+  +++S  SRV K G V+L F+PA+  +KYD+ ++Q+FALSPTE G+
Sbjct: 55  GKAALSMQPILPSFSKLESGGSRVNKNGSVMLTFFPAVGQRKYDYSKKQLFALSPTEVGS 114

Query: 567 LIALGPDESCEFLHDPSLKSSLEGQVRKSLQVSPSANDKGYFLNLMVANKIQNTNERLSI 388
           LI+LGP ESCEF HDPS+KSS EGQV+KSL V+P  ND GYFLN+ V N +Q T ERLS+
Sbjct: 115 LISLGPAESCEFFHDPSMKSSHEGQVKKSLSVTPLGNDSGYFLNITVLNNLQKTTERLSL 174

Query: 387 SVTKAEFAVIRTILTAG--HRPGDRNCLTLHQTCTS 286
            ++KAEF V+RT L+    H  G    LT HQ   S
Sbjct: 175 PISKAEFTVMRTALSFALPHILGWDQALTNHQPSPS 210


>ref|XP_006646903.1| PREDICTED: single-stranded DNA-binding protein WHY2,
           mitochondrial-like [Oryza brachyantha]
          Length = 230

 Score =  198 bits (503), Expect = 3e-48
 Identities = 104/196 (53%), Positives = 136/196 (69%), Gaps = 5/196 (2%)
 Frame = -1

Query: 915 LSALPRF-LASRTLGRAAEVKSPLW----LIMHGISTSGPDLVTDAGSASFRRYAKYTVF 751
           +  L RF  A  +  R  ++K  LW       H +ST   D  T     S R++A YTVF
Sbjct: 1   MQRLSRFGFAPSSSRRVTDLKDALWSGSLTFQHALSTLSADENT-----SGRKFASYTVF 55

Query: 750 KGKAALSLEPVLPTIREVDSRISRVFKRGCVVLKFYPAIALQKYDWKRRQVFALSPTEAG 571
           KGKAALS+ PVLP+  +++S  SRV + G V+L F+PA+  +KYD+ ++Q+FALSPTE G
Sbjct: 56  KGKAALSMHPVLPSFSKLESGGSRVSRNGSVMLTFFPAVGQRKYDYSKKQIFALSPTEVG 115

Query: 570 NLIALGPDESCEFLHDPSLKSSLEGQVRKSLQVSPSANDKGYFLNLMVANKIQNTNERLS 391
           +LI+LGP ESCEF HDPS+KSS EGQV+KSL V+P  ND GYFLN+ V N +Q T ERLS
Sbjct: 116 SLISLGPAESCEFFHDPSMKSSHEGQVKKSLSVTPLGNDSGYFLNITVLNNLQKTTERLS 175

Query: 390 ISVTKAEFAVIRTILT 343
           + +TKAEFAV+RT L+
Sbjct: 176 LPITKAEFAVMRTTLS 191


>gb|AFW66475.1| DNA binding protein isoform 1 [Zea mays]
           gi|413926544|gb|AFW66476.1| DNA binding protein isoform
           2 [Zea mays]
          Length = 274

 Score =  194 bits (492), Expect = 6e-47
 Identities = 104/208 (50%), Positives = 141/208 (67%), Gaps = 6/208 (2%)
 Frame = -1

Query: 906 LPRFLASRTLGRAAEVKSPLW----LIMHGISTSGPDLVTDAGSASFRRYAKYTVFKGKA 739
           L RFL S    R  ++K  LW         +ST+  +L    G+ S +++A YTVFKGKA
Sbjct: 46  LSRFLPS-ACRRGFDLKESLWSGSLTFQQAVSTAATNL---DGNLSGKKFASYTVFKGKA 101

Query: 738 ALSLEPVLPTIREVDSRISRVFKRGCVVLKFYPAIALQKYDWKRRQVFALSPTEAGNLIA 559
           ALS+ P+LP+  +++S  SRV K G V+L F+PA+  +KYD+ ++Q+FALSPTE G+LI+
Sbjct: 102 ALSIHPILPSFSKLESGGSRVSKNGSVMLTFFPAVGQRKYDYTKKQLFALSPTEVGSLIS 161

Query: 558 LGPDESCEFLHDPSLKSSLEGQVRKSLQVSPSANDKGYFLNLMVANKIQNTNERLSISVT 379
           LGP ESCEF HDPS+KSS EG V+KSL ++P  +D GYF+N+ V N  + TN+RLS+ +T
Sbjct: 162 LGPAESCEFFHDPSMKSSNEGTVKKSLSITPLGSDSGYFVNITVVNSAERTNDRLSVPIT 221

Query: 378 KAEFAVIRTILTAG--HRPGDRNCLTLH 301
           KAEFAVIRT L+    H  G    LT H
Sbjct: 222 KAEFAVIRTTLSFALPHIMGWDQALTNH 249


>gb|ACG35575.1| DNA binding protein [Zea mays]
          Length = 230

 Score =  194 bits (492), Expect = 6e-47
 Identities = 104/208 (50%), Positives = 141/208 (67%), Gaps = 6/208 (2%)
 Frame = -1

Query: 906 LPRFLASRTLGRAAEVKSPLWL----IMHGISTSGPDLVTDAGSASFRRYAKYTVFKGKA 739
           L RFL S    R  ++K  LW         +ST+  +L    G+ S +++A YTVFKGKA
Sbjct: 4   LSRFLPS-ACRRGFDLKESLWCGSLTFQQAVSTAATNL---DGNLSGKKFASYTVFKGKA 59

Query: 738 ALSLEPVLPTIREVDSRISRVFKRGCVVLKFYPAIALQKYDWKRRQVFALSPTEAGNLIA 559
           ALS+ P+LP+  +++S  SRV K G V+L F+PA+  +KYD+ ++Q+FALSPTE G+LI+
Sbjct: 60  ALSIHPILPSFSKLESGGSRVSKNGSVMLTFFPAVGQRKYDYTKKQLFALSPTEVGSLIS 119

Query: 558 LGPDESCEFLHDPSLKSSLEGQVRKSLQVSPSANDKGYFLNLMVANKIQNTNERLSISVT 379
           LGP ESCEF HDPS+KSS EG V+KSL ++P  +D GYF+N+ V N  + TN+RLS+ +T
Sbjct: 120 LGPAESCEFFHDPSMKSSNEGTVKKSLSITPLGSDSGYFVNITVVNSAERTNDRLSVPIT 179

Query: 378 KAEFAVIRTILTAG--HRPGDRNCLTLH 301
           KAEFAVIRT L+    H  G    LT H
Sbjct: 180 KAEFAVIRTTLSFALPHIMGWDQALTNH 207


>gb|ACF85629.1| unknown [Zea mays] gi|323388661|gb|ADX60135.1| PBF-2 like
           transcription factor [Zea mays]
           gi|323388771|gb|ADX60190.1| PBF-2 like transcription
           factor [Zea mays]
          Length = 232

 Score =  194 bits (492), Expect = 6e-47
 Identities = 104/208 (50%), Positives = 141/208 (67%), Gaps = 6/208 (2%)
 Frame = -1

Query: 906 LPRFLASRTLGRAAEVKSPLW----LIMHGISTSGPDLVTDAGSASFRRYAKYTVFKGKA 739
           L RFL S    R  ++K  LW         +ST+  +L    G+ S +++A YTVFKGKA
Sbjct: 4   LSRFLPS-ACRRGFDLKESLWSGSLTFQQAVSTAATNL---DGNLSGKKFASYTVFKGKA 59

Query: 738 ALSLEPVLPTIREVDSRISRVFKRGCVVLKFYPAIALQKYDWKRRQVFALSPTEAGNLIA 559
           ALS+ P+LP+  +++S  SRV K G V+L F+PA+  +KYD+ ++Q+FALSPTE G+LI+
Sbjct: 60  ALSIHPILPSFSKLESGGSRVSKNGSVMLTFFPAVGQRKYDYTKKQLFALSPTEVGSLIS 119

Query: 558 LGPDESCEFLHDPSLKSSLEGQVRKSLQVSPSANDKGYFLNLMVANKIQNTNERLSISVT 379
           LGP ESCEF HDPS+KSS EG V+KSL ++P  +D GYF+N+ V N  + TN+RLS+ +T
Sbjct: 120 LGPAESCEFFHDPSMKSSNEGTVKKSLSITPLGSDSGYFVNITVVNSAERTNDRLSVPIT 179

Query: 378 KAEFAVIRTILTAG--HRPGDRNCLTLH 301
           KAEFAVIRT L+    H  G    LT H
Sbjct: 180 KAEFAVIRTTLSFALPHIMGWDQALTNH 207


>ref|NP_001152589.1| LOC100286229 [Zea mays] gi|195657845|gb|ACG48390.1| DNA binding
           protein [Zea mays]
          Length = 232

 Score =  191 bits (484), Expect = 5e-46
 Identities = 103/208 (49%), Positives = 140/208 (67%), Gaps = 6/208 (2%)
 Frame = -1

Query: 906 LPRFLASRTLGRAAEVKSPLW----LIMHGISTSGPDLVTDAGSASFRRYAKYTVFKGKA 739
           L RFL S    R  ++K  LW         +ST+  +L    G+ S +++A YTVFKGKA
Sbjct: 4   LSRFLPS-ACRRGFDLKESLWSGSLTFQQAVSTAATNL---DGNLSGKKFASYTVFKGKA 59

Query: 738 ALSLEPVLPTIREVDSRISRVFKRGCVVLKFYPAIALQKYDWKRRQVFALSPTEAGNLIA 559
           ALS+ P+L +  +++S  SRV K G V+L F+PA+  +KYD+ ++Q+FALSPTE G+LI+
Sbjct: 60  ALSIHPILXSFSKLESGGSRVSKNGSVMLTFFPAVGQRKYDYTKKQLFALSPTEVGSLIS 119

Query: 558 LGPDESCEFLHDPSLKSSLEGQVRKSLQVSPSANDKGYFLNLMVANKIQNTNERLSISVT 379
           LGP ESCEF HDPS+KSS EG V+KSL ++P  +D GYF+N+ V N  + TN+RLS+ +T
Sbjct: 120 LGPAESCEFFHDPSMKSSNEGTVKKSLSITPLGSDSGYFVNITVVNSAERTNDRLSVPIT 179

Query: 378 KAEFAVIRTILTAG--HRPGDRNCLTLH 301
           KAEFAVIRT L+    H  G    LT H
Sbjct: 180 KAEFAVIRTTLSFALPHIMGWDQALTNH 207


>ref|XP_004951836.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
           mitochondrial-like [Setaria italica]
          Length = 229

 Score =  189 bits (481), Expect = 1e-45
 Identities = 101/208 (48%), Positives = 142/208 (68%), Gaps = 6/208 (2%)
 Frame = -1

Query: 906 LPRFLASRTLGRAAEVKSPLW----LIMHGISTSGPDLVTDAGSASFRRYAKYTVFKGKA 739
           L RFL S +  R  + K  LW         +STS  +L  ++   S +++A YTVFKGKA
Sbjct: 4   LSRFLPSASR-RGFDPKEALWSGSLTFQQAVSTSAANLDENS---SGKKFASYTVFKGKA 59

Query: 738 ALSLEPVLPTIREVDSRISRVFKRGCVVLKFYPAIALQKYDWKRRQVFALSPTEAGNLIA 559
           ALS+ P+LP+  +++S  SR+ + G V+L F+PA+  +KYD+ ++Q+F+LSPTE G+LI+
Sbjct: 60  ALSIHPILPSFCKMESGASRINRNGSVMLTFFPAVGQRKYDYTKKQLFSLSPTEVGSLIS 119

Query: 558 LGPDESCEFLHDPSLKSSLEGQVRKSLQVSPSANDKGYFLNLMVANKIQNTNERLSISVT 379
           LGP ESCEF HDPS+KSS EGQV+KSL ++P  +D GYF+N+ V N +Q T +RLS+ +T
Sbjct: 120 LGPAESCEFFHDPSMKSSHEGQVKKSLSITPLGSDSGYFVNITVLNNMQKTTDRLSVPIT 179

Query: 378 KAEFAVIRTILTAG--HRPGDRNCLTLH 301
           KAEFAV+RT L+    H  G    LT H
Sbjct: 180 KAEFAVMRTALSFALPHIMGWDQVLTRH 207


>ref|XP_002453336.1| hypothetical protein SORBIDRAFT_04g004060 [Sorghum bicolor]
           gi|241933167|gb|EES06312.1| hypothetical protein
           SORBIDRAFT_04g004060 [Sorghum bicolor]
          Length = 230

 Score =  188 bits (478), Expect = 2e-45
 Identities = 100/208 (48%), Positives = 142/208 (68%), Gaps = 6/208 (2%)
 Frame = -1

Query: 906 LPRFLASRTLGRAAEVKSPLW----LIMHGISTSGPDLVTDAGSASFRRYAKYTVFKGKA 739
           L RFL S +  R  ++K  L          +STS  ++  +  S   ++YA YTVFKGKA
Sbjct: 4   LSRFLPSASR-RGFDLKESLLSGSLTFQQAVSTSAANIDDNLSS---KKYASYTVFKGKA 59

Query: 738 ALSLEPVLPTIREVDSRISRVFKRGCVVLKFYPAIALQKYDWKRRQVFALSPTEAGNLIA 559
           ALS++P+LP+  +++S  SRV + G ++L F+PA+  +KYD+ ++Q+FALSPTE G+LI+
Sbjct: 60  ALSIQPILPSFSKLESGGSRVSRNGSIMLTFFPAVGPRKYDFTKKQLFALSPTEVGSLIS 119

Query: 558 LGPDESCEFLHDPSLKSSLEGQVRKSLQVSPSANDKGYFLNLMVANKIQNTNERLSISVT 379
           LGP ESCEF HDPS+KSS EG V+KSL ++P  +D GYF+N+ V N ++ TN+RLS+ +T
Sbjct: 120 LGPAESCEFFHDPSMKSSNEGMVKKSLSITPLGSDSGYFVNITVVNSVEKTNDRLSVPIT 179

Query: 378 KAEFAVIRTILTAG--HRPGDRNCLTLH 301
           KAEFAV+RT L+    H  G    LT H
Sbjct: 180 KAEFAVMRTTLSFALPHIMGWDQALTNH 207


>pdb|4KOP|A Chain A, Crystal Structure Of Why2 From Arabidopsis Thaliana
           gi|557805000|pdb|4KOP|B Chain B, Crystal Structure Of
           Why2 From Arabidopsis Thaliana gi|557805001|pdb|4KOP|C
           Chain C, Crystal Structure Of Why2 From Arabidopsis
           Thaliana gi|557805002|pdb|4KOP|D Chain D, Crystal
           Structure Of Why2 From Arabidopsis Thaliana
          Length = 177

 Score =  169 bits (429), Expect = 1e-39
 Identities = 83/149 (55%), Positives = 110/149 (73%)
 Frame = -1

Query: 798 DAGSASFRRYAKYTVFKGKAALSLEPVLPTIREVDSRISRVFKRGCVVLKFYPAIALQKY 619
           DA   S R +A Y++FKGKAALS+EPVLP+  E+DS   R+ +RG +++ F PAI  +KY
Sbjct: 3   DAAKPSGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKY 62

Query: 618 DWKRRQVFALSPTEAGNLIALGPDESCEFLHDPSLKSSLEGQVRKSLQVSPSANDKGYFL 439
           DW+++Q FALSPTE G+LI++G  +S EF HDPS+KSS  GQVRKSL V P A+  GYF+
Sbjct: 63  DWEKKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSVKPHADGSGYFI 122

Query: 438 NLMVANKIQNTNERLSISVTKAEFAVIRT 352
           +L V N I  TN+   + VTKAEFAV++T
Sbjct: 123 SLSVNNSILKTNDYFVVPVTKAEFAVMKT 151


>gb|AAG51881.1|AC016162_2 unknown protein; 79476-81015 [Arabidopsis thaliana]
          Length = 237

 Score =  169 bits (429), Expect = 1e-39
 Identities = 83/149 (55%), Positives = 110/149 (73%)
 Frame = -1

Query: 798 DAGSASFRRYAKYTVFKGKAALSLEPVLPTIREVDSRISRVFKRGCVVLKFYPAIALQKY 619
           DA   S R +A Y++FKGKAALS+EPVLP+  E+DS   R+ +RG +++ F PAI  +KY
Sbjct: 45  DAAKPSGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKY 104

Query: 618 DWKRRQVFALSPTEAGNLIALGPDESCEFLHDPSLKSSLEGQVRKSLQVSPSANDKGYFL 439
           DW+++Q FALSPTE G+LI++G  +S EF HDPS+KSS  GQVRKSL V P A+  GYF+
Sbjct: 105 DWEKKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSVKPHADGSGYFI 164

Query: 438 NLMVANKIQNTNERLSISVTKAEFAVIRT 352
           +L V N I  TN+   + VTKAEFAV++T
Sbjct: 165 SLSVNNSILKTNDYFVVPVTKAEFAVMKT 193


>ref|NP_177282.2| single-stranded DNA-binding protein WHY2 [Arabidopsis thaliana]
           gi|75161474|sp|Q8VYF7.1|WHY2_ARATH RecName:
           Full=Single-stranded DNA-binding protein WHY2,
           mitochondrial; AltName: Full=Protein WHIRLY 2;
           Short=AtWHY2; Flags: Precursor
           gi|18175814|gb|AAL59932.1| unknown protein [Arabidopsis
           thaliana] gi|21689867|gb|AAM67494.1| unknown protein
           [Arabidopsis thaliana] gi|225898076|dbj|BAH30370.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332197060|gb|AEE35181.1| single-stranded DNA-binding
           protein WHY2 [Arabidopsis thaliana]
          Length = 238

 Score =  169 bits (429), Expect = 1e-39
 Identities = 83/149 (55%), Positives = 110/149 (73%)
 Frame = -1

Query: 798 DAGSASFRRYAKYTVFKGKAALSLEPVLPTIREVDSRISRVFKRGCVVLKFYPAIALQKY 619
           DA   S R +A Y++FKGKAALS+EPVLP+  E+DS   R+ +RG +++ F PAI  +KY
Sbjct: 46  DAAKPSGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKY 105

Query: 618 DWKRRQVFALSPTEAGNLIALGPDESCEFLHDPSLKSSLEGQVRKSLQVSPSANDKGYFL 439
           DW+++Q FALSPTE G+LI++G  +S EF HDPS+KSS  GQVRKSL V P A+  GYF+
Sbjct: 106 DWEKKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSVKPHADGSGYFI 165

Query: 438 NLMVANKIQNTNERLSISVTKAEFAVIRT 352
           +L V N I  TN+   + VTKAEFAV++T
Sbjct: 166 SLSVNNSILKTNDYFVVPVTKAEFAVMKT 194


>ref|XP_004250749.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
           mitochondrial-like isoform 1 [Solanum lycopersicum]
          Length = 238

 Score =  169 bits (427), Expect = 2e-39
 Identities = 86/175 (49%), Positives = 118/175 (67%), Gaps = 4/175 (2%)
 Frame = -1

Query: 864 EVKSPLWL----IMHGISTSGPDLVTDAGSASFRRYAKYTVFKGKAALSLEPVLPTIREV 697
           +VK  +W          ST   D+V DAG    R +A Y+VFKGKAALS EP LPT   +
Sbjct: 23  DVKGSIWQNAINTFAAFSTVRQDVVADAGKREGRVFAPYSVFKGKAALSAEPRLPTFNRL 82

Query: 696 DSRISRVFKRGCVVLKFYPAIALQKYDWKRRQVFALSPTEAGNLIALGPDESCEFLHDPS 517
           DS   ++ +RG ++L F+P++  +KYDW++RQ+FALS TE G+LI++G  +S EF HDPS
Sbjct: 83  DSGGVKLNRRGVIMLTFWPSVGERKYDWEKRQLFALSATEVGSLISMGTRDSSEFFHDPS 142

Query: 516 LKSSLEGQVRKSLQVSPSANDKGYFLNLMVANKIQNTNERLSISVTKAEFAVIRT 352
           + SS  GQVRKSL + P+A+  GYF++L V N    TN+R ++ VT AEFAV+RT
Sbjct: 143 MLSSNAGQVRKSLSIKPNADGSGYFVSLSVVNNNLKTNDRFTVPVTTAEFAVMRT 197


>ref|NP_001275393.1| single-stranded DNA-bindig protein WHY2, mitochondrial [Solanum
           tuberosum] gi|426021772|sp|D9J034.1|WHY2_SOLTU RecName:
           Full=Single-stranded DNA-bindig protein WHY2,
           mitochondrial; AltName: Full=Protein WHIRLY 2;
           Short=StWHY2; Flags: Precursor
           gi|298359665|gb|ADI77438.1| Why2 protein [Solanum
           tuberosum]
          Length = 238

 Score =  169 bits (427), Expect = 2e-39
 Identities = 86/174 (49%), Positives = 118/174 (67%), Gaps = 4/174 (2%)
 Frame = -1

Query: 861 VKSPLWL----IMHGISTSGPDLVTDAGSASFRRYAKYTVFKGKAALSLEPVLPTIREVD 694
           VK  +W        G ST   ++V DAG    R +A Y+VFKGKAALS EP LPT   +D
Sbjct: 24  VKGSIWQHAINTFAGFSTVRQNVVADAGKREGRVFAPYSVFKGKAALSAEPRLPTFNRLD 83

Query: 693 SRISRVFKRGCVVLKFYPAIALQKYDWKRRQVFALSPTEAGNLIALGPDESCEFLHDPSL 514
           S   ++ +RG ++L F+P++  +KYDW++RQ+FALS TE G+LI++G  +S EF HDPS+
Sbjct: 84  SGGVKLNRRGVIMLTFWPSVGERKYDWEKRQLFALSATEVGSLISMGTRDSSEFFHDPSM 143

Query: 513 KSSLEGQVRKSLQVSPSANDKGYFLNLMVANKIQNTNERLSISVTKAEFAVIRT 352
            SS  GQVRKSL + P+A+  GYF++L V N    TN+R ++ VT AEFAV+RT
Sbjct: 144 LSSNAGQVRKSLSIKPNADGSGYFISLSVVNNNLKTNDRFTVPVTTAEFAVMRT 197


>ref|XP_002888827.1| ATWHY2 [Arabidopsis lyrata subsp. lyrata]
           gi|297334668|gb|EFH65086.1| ATWHY2 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 242

 Score =  167 bits (424), Expect = 4e-39
 Identities = 82/149 (55%), Positives = 110/149 (73%)
 Frame = -1

Query: 798 DAGSASFRRYAKYTVFKGKAALSLEPVLPTIREVDSRISRVFKRGCVVLKFYPAIALQKY 619
           DA   S R +A Y++FKGKAALS+EPVLP+  E+DS   R+ +RG +++ F PAI  +KY
Sbjct: 50  DAPKPSGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKY 109

Query: 618 DWKRRQVFALSPTEAGNLIALGPDESCEFLHDPSLKSSLEGQVRKSLQVSPSANDKGYFL 439
           DW+++Q FALSPTE G+LI++G  +S EF HDPS+KSS  GQVRKSL + P A+  GYF+
Sbjct: 110 DWEKKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSIKPHADGSGYFI 169

Query: 438 NLMVANKIQNTNERLSISVTKAEFAVIRT 352
           +L V N I  TN+   + VTKAEFAV++T
Sbjct: 170 SLSVNNGILKTNDYFVVPVTKAEFAVMKT 198


>ref|XP_006836884.1| hypothetical protein AMTR_s00099p00109140 [Amborella trichopoda]
           gi|548839448|gb|ERM99737.1| hypothetical protein
           AMTR_s00099p00109140 [Amborella trichopoda]
          Length = 249

 Score =  167 bits (423), Expect = 6e-39
 Identities = 80/160 (50%), Positives = 114/160 (71%)
 Frame = -1

Query: 831 GISTSGPDLVTDAGSASFRRYAKYTVFKGKAALSLEPVLPTIREVDSRISRVFKRGCVVL 652
           GIST   DL  +           Y +FKGKAAL ++P+ P   +++    R+ +RGCV+L
Sbjct: 48  GISTVSGDLGINGSLCKLS--VPYCIFKGKAALKMDPIGPKFSKLNPDSMRIERRGCVLL 105

Query: 651 KFYPAIALQKYDWKRRQVFALSPTEAGNLIALGPDESCEFLHDPSLKSSLEGQVRKSLQV 472
            F+PAI ++KYDW++RQ+FALS TE G++I+LGP +SCEF HDPSLK S EGQVRKSL +
Sbjct: 106 TFFPAIGVRKYDWQKRQIFALSATEVGSVISLGPTDSCEFFHDPSLKKSDEGQVRKSLHI 165

Query: 471 SPSANDKGYFLNLMVANKIQNTNERLSISVTKAEFAVIRT 352
           +P++++ G+F NL V N IQ T +RLS+ V KAE +V+++
Sbjct: 166 APNSDNSGHFFNLQVTNAIQKTMDRLSVPVAKAELSVMQS 205


>gb|AFK37234.1| unknown [Lotus japonicus]
          Length = 235

 Score =  167 bits (422), Expect = 7e-39
 Identities = 82/158 (51%), Positives = 109/158 (68%)
 Frame = -1

Query: 825 STSGPDLVTDAGSASFRRYAKYTVFKGKAALSLEPVLPTIREVDSRISRVFKRGCVVLKF 646
           ST+  +     G  + R +A Y V+KGKAA+SL PVLPT  ++DS    V +RG +++ F
Sbjct: 34  STAARETYVAKGYTTDRVFAPYYVYKGKAAMSLSPVLPTFTKLDSGALVVERRGSIMMVF 93

Query: 645 YPAIALQKYDWKRRQVFALSPTEAGNLIALGPDESCEFLHDPSLKSSLEGQVRKSLQVSP 466
            PAI  +KYDW++RQ FALS TE G+LIA+GP +SCEF HDPS+ SS  GQVRKSL + P
Sbjct: 94  TPAIGERKYDWEKRQKFALSATEVGSLIAMGPQDSCEFFHDPSMSSSNAGQVRKSLSIKP 153

Query: 465 SANDKGYFLNLMVANKIQNTNERLSISVTKAEFAVIRT 352
            AN  GYF++L V N + N  E  ++ VT AEFAV++T
Sbjct: 154 HANSSGYFVSLTVVNNLLNAKENFNVPVTTAEFAVMKT 191


>ref|XP_006302759.1| hypothetical protein CARUB_v10020880mg [Capsella rubella]
           gi|482571469|gb|EOA35657.1| hypothetical protein
           CARUB_v10020880mg [Capsella rubella]
          Length = 235

 Score =  164 bits (416), Expect = 4e-38
 Identities = 80/149 (53%), Positives = 108/149 (72%)
 Frame = -1

Query: 798 DAGSASFRRYAKYTVFKGKAALSLEPVLPTIREVDSRISRVFKRGCVVLKFYPAIALQKY 619
           +A   S R +A Y +FKGKAALS+EPVLPT  E+DS   R+ +RG +++ F PA   +KY
Sbjct: 44  EAAKPSGRVFAPYAIFKGKAALSVEPVLPTFTEIDSGNLRLDRRGSLMMTFMPASGERKY 103

Query: 618 DWKRRQVFALSPTEAGNLIALGPDESCEFLHDPSLKSSLEGQVRKSLQVSPSANDKGYFL 439
           DW+++Q FALSPTE G+LI++G  +S EF HDPS+KSS  GQVRKSL + P A+  GYF+
Sbjct: 104 DWEKKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSIKPHADGSGYFI 163

Query: 438 NLMVANKIQNTNERLSISVTKAEFAVIRT 352
           +L V N I  TN+R+ + VT AEF V++T
Sbjct: 164 SLGVINSILKTNDRIVVPVTTAEFTVMKT 192


>ref|XP_006302758.1| hypothetical protein CARUB_v10020880mg [Capsella rubella]
           gi|482571468|gb|EOA35656.1| hypothetical protein
           CARUB_v10020880mg [Capsella rubella]
          Length = 234

 Score =  164 bits (416), Expect = 4e-38
 Identities = 80/149 (53%), Positives = 108/149 (72%)
 Frame = -1

Query: 798 DAGSASFRRYAKYTVFKGKAALSLEPVLPTIREVDSRISRVFKRGCVVLKFYPAIALQKY 619
           +A   S R +A Y +FKGKAALS+EPVLPT  E+DS   R+ +RG +++ F PA   +KY
Sbjct: 43  EAAKPSGRVFAPYAIFKGKAALSVEPVLPTFTEIDSGNLRLDRRGSLMMTFMPASGERKY 102

Query: 618 DWKRRQVFALSPTEAGNLIALGPDESCEFLHDPSLKSSLEGQVRKSLQVSPSANDKGYFL 439
           DW+++Q FALSPTE G+LI++G  +S EF HDPS+KSS  GQVRKSL + P A+  GYF+
Sbjct: 103 DWEKKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSIKPHADGSGYFI 162

Query: 438 NLMVANKIQNTNERLSISVTKAEFAVIRT 352
           +L V N I  TN+R+ + VT AEF V++T
Sbjct: 163 SLGVINSILKTNDRIVVPVTTAEFTVMKT 191