BLASTX nr result

ID: Zingiber23_contig00013534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00013534
         (252 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006859059.1| hypothetical protein AMTR_s00068p00196240 [A...    70   3e-10
ref|XP_002268572.1| PREDICTED: uncharacterized protein LOC100258...    58   1e-06
emb|CAN75541.1| hypothetical protein VITISV_005095 [Vitis vinifera]    58   1e-06
ref|XP_004488615.1| PREDICTED: YTH domain family protein 2-like ...    58   1e-06
ref|XP_004488614.1| PREDICTED: YTH domain family protein 2-like ...    58   1e-06

>ref|XP_006859059.1| hypothetical protein AMTR_s00068p00196240 [Amborella trichopoda]
           gi|548863171|gb|ERN20526.1| hypothetical protein
           AMTR_s00068p00196240 [Amborella trichopoda]
          Length = 595

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 36/81 (44%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
 Frame = +3

Query: 9   TAVLPKGYVPLNKFSAYANQVNGALHYPNAVIPMNENTRCWVDDEKLKARNKLNSFADLD 188
           TAVL KGY PL KF AY+N   G + YPN+ +   +N R W   E+ K+R K N F+D D
Sbjct: 266 TAVLAKGYFPLPKFPAYSNNGKGGVLYPNSPMNFKQNGRNWASAERFKSRGKGNGFSDFD 325

Query: 189 ------RGPRTNSIKTTNSGD 233
                 RGPRT  I   +  D
Sbjct: 326 VLNEQNRGPRTKGISEKSESD 346


>ref|XP_002268572.1| PREDICTED: uncharacterized protein LOC100258644 [Vitis vinifera]
           gi|297736091|emb|CBI24129.3| unnamed protein product
           [Vitis vinifera]
          Length = 591

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
 Frame = +3

Query: 6   PTAVLPKGYVPLNKFSAYANQVNGALHYPNAVIPMNENTRCWVDDEKLKARNKLNSFADL 185
           P   L K Y P+ K  +Y NQ  G L YPN+ + +  N+R WV  EKLK R+K N+ +D 
Sbjct: 261 PDDALGKDYFPIAKLQSY-NQGKGGLLYPNSPVNLKANSRGWVSTEKLKMRSKANAISDF 319

Query: 186 -----DRGPRTNSIK 215
                + GPRT S K
Sbjct: 320 GVLEQNHGPRTASAK 334


>emb|CAN75541.1| hypothetical protein VITISV_005095 [Vitis vinifera]
          Length = 592

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
 Frame = +3

Query: 6   PTAVLPKGYVPLNKFSAYANQVNGALHYPNAVIPMNENTRCWVDDEKLKARNKLNSFADL 185
           P   L K Y P+ K  +Y NQ  G L YPN+ + +  N+R WV  EKLK R+K N+ +D 
Sbjct: 247 PDDALGKDYFPIAKLQSY-NQGKGGLLYPNSPVNLKANSRGWVSTEKLKMRSKANAISDF 305

Query: 186 -----DRGPRTNSIK 215
                + GPRT S K
Sbjct: 306 GVLEQNHGPRTASAK 320


>ref|XP_004488615.1| PREDICTED: YTH domain family protein 2-like isoform X2 [Cicer
           arietinum]
          Length = 505

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
 Frame = +3

Query: 18  LPKGYVPLNKFSAYANQVNGALHYPNAVIPMNENTRCWVDDEKLKARNKLN-SFADLDRG 194
           + KG  P+ KFS Y NQ      YPN    +  NT+ WV  EKLK R+K+N S  + ++G
Sbjct: 190 MAKGSFPVAKFSTY-NQGKSGFPYPNNFPNVKANTKGWVSTEKLKLRSKVNDSLNEQNQG 248

Query: 195 PRTNSIK-TTNSGDNFQETL 251
           PRT + K   NSGDN   T+
Sbjct: 249 PRTANTKGALNSGDNSATTV 268


>ref|XP_004488614.1| PREDICTED: YTH domain family protein 2-like isoform X1 [Cicer
           arietinum]
          Length = 586

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
 Frame = +3

Query: 18  LPKGYVPLNKFSAYANQVNGALHYPNAVIPMNENTRCWVDDEKLKARNKLN-SFADLDRG 194
           + KG  P+ KFS Y NQ      YPN    +  NT+ WV  EKLK R+K+N S  + ++G
Sbjct: 271 MAKGSFPVAKFSTY-NQGKSGFPYPNNFPNVKANTKGWVSTEKLKLRSKVNDSLNEQNQG 329

Query: 195 PRTNSIK-TTNSGDNFQETL 251
           PRT + K   NSGDN   T+
Sbjct: 330 PRTANTKGALNSGDNSATTV 349


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