BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00013315
         (1166 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004958171.1| PREDICTED: protein SHORT-ROOT 1-like [Setari...   326   1e-86
ref|NP_001169599.1| hypothetical protein [Zea mays] gi|224030299...   325   2e-86
gb|ACN33432.1| unknown [Zea mays]                                     325   2e-86
dbj|BAK02177.1| predicted protein [Hordeum vulgare subsp. vulgare]    323   1e-85
ref|XP_002460941.1| hypothetical protein SORBIDRAFT_02g037890 [S...   323   1e-85
dbj|BAC20900.1| short-root protein-like [Oryza sativa Japonica G...   322   1e-85
sp|A2YN56.1|SHR1_ORYSI RecName: Full=Protein SHORT-ROOT 1; AltNa...   322   1e-85
ref|NP_001060133.1| Os07g0586900 [Oryza sativa Japonica Group] g...   322   1e-85
sp|A2XIA8.1|SHR2_ORYSI RecName: Full=Protein SHORT-ROOT 2; AltNa...   319   2e-84
ref|NP_001173487.1| Os03g0433200 [Oryza sativa Japonica Group] g...   319   2e-84
tpg|DAA41268.1| TPA: hypothetical protein ZEAMMB73_913831 [Zea m...   318   3e-84
ref|XP_006658750.1| PREDICTED: protein SHORT-ROOT 1-like [Oryza ...   317   6e-84
ref|XP_004983931.1| PREDICTED: protein SHORT-ROOT 2-like [Setari...   317   8e-84
ref|XP_002467655.1| hypothetical protein SORBIDRAFT_01g031720 [S...   315   2e-83
tpg|DAA45910.1| TPA: hypothetical protein ZEAMMB73_781034 [Zea m...   312   1e-82
ref|XP_003562791.1| PREDICTED: protein SHORT-ROOT 1-like [Brachy...   312   1e-82
gb|EEE59318.1| hypothetical protein OsJ_11379 [Oryza sativa Japo...   306   1e-80
ref|XP_004231927.1| PREDICTED: protein SHORT-ROOT-like [Solanum ...   283   1e-73
ref|XP_006363828.1| PREDICTED: protein SHORT-ROOT-like [Solanum ...   281   3e-73
ref|XP_003611578.1| GRAS family transcription factor [Medicago t...   280   1e-72

>ref|XP_004958171.1| PREDICTED: protein SHORT-ROOT 1-like [Setaria italica]
          Length = 594

 Score =  326 bits (836), Expect = 1e-86
 Identities = 183/314 (58%), Positives = 212/314 (67%), Gaps = 22/314 (7%)
 Frame = -3

Query: 1164 HVAANGAILEAFLEET-----PQRLHILDLSTTFCTQWPTLLEALATRSADDTPHLTITT 1000
            HVAANGAILE+FLE       PQR HILDLS TFCTQWPTLLEALATRSADDTPHL+ITT
Sbjct: 281  HVAANGAILESFLEAAAASPEPQRFHILDLSNTFCTQWPTLLEALATRSADDTPHLSITT 340

Query: 999  VAAASSS-----MQRVMKEIGQRMEKFARLMGVPFRFNVIHHPXXXXXXXXXXXXXXXXX 835
            V +A+ S     +QRVM+EIGQRMEKFARLMGVPF F  +HH                  
Sbjct: 341  VVSAAPSAPTAAVQRVMREIGQRMEKFARLMGVPFSFRAVHHAGDLAELDLDALDLRDGG 400

Query: 834  XXXXLAVNCVNALHAISPSG-RRRDGFLAAIRRLRPRIVTVVEEEADLASSE---APEEG 667
                LAVNCVN+L  + P G RRRD F +++RRL PR+VTVVEEEADL +S+   + EEG
Sbjct: 401  ASTALAVNCVNSLRGVVPGGARRRDAFTSSLRRLDPRVVTVVEEEADLVASDPDTSSEEG 460

Query: 666  ----EAFVKVFEESLRFFTAYLESLEESFPRATNXXXXXXXXXXXAVVDLVSCXXXXXXX 499
                 AF+KVF E LRFF+AY++SLEESFP+ +N           A+VDLVSC       
Sbjct: 461  GDSEAAFLKVFGEGLRFFSAYMDSLEESFPKTSNERLALERGAGRAIVDLVSCPASESME 520

Query: 498  XXXXXXXXXXRMRTAGFAPAAFSEDVTDDVRALLRRYREGWSMRAPAADE----AGVFLE 331
                      RMR+AGF+P AFSEDV DDVR+LLRRYREGWSMR    D+    AGVFL 
Sbjct: 521  RRETAASWARRMRSAGFSPVAFSEDVADDVRSLLRRYREGWSMRDAGLDDSAAGAGVFLA 580

Query: 330  WREQAVVWASAWKP 289
            W+EQ +VWASAWKP
Sbjct: 581  WKEQPLVWASAWKP 594


>ref|NP_001169599.1| hypothetical protein [Zea mays] gi|224030299|gb|ACN34225.1| unknown
            [Zea mays] gi|414887363|tpg|DAA63377.1| TPA: hypothetical
            protein ZEAMMB73_763916 [Zea mays]
          Length = 592

 Score =  325 bits (834), Expect = 2e-86
 Identities = 181/313 (57%), Positives = 213/313 (68%), Gaps = 21/313 (6%)
 Frame = -3

Query: 1164 HVAANGAILEAFLEET-----PQRLHILDLSTTFCTQWPTLLEALATRSADDTPHLTITT 1000
            HVAANGAILE+FLE       PQRLHILDLS TFCTQWPTLLEALATRSADDTPHL+ITT
Sbjct: 280  HVAANGAILESFLEAAAASPEPQRLHILDLSNTFCTQWPTLLEALATRSADDTPHLSITT 339

Query: 999  V-----AAASSSMQRVMKEIGQRMEKFARLMGVPFRFNVIHHPXXXXXXXXXXXXXXXXX 835
            V     +A ++++QRVM+EIGQRMEKFARLMGVPF F  +HH                  
Sbjct: 340  VVSSAPSAPTAAVQRVMREIGQRMEKFARLMGVPFSFRAVHHAGDLAGLDLDALDLRDGG 399

Query: 834  XXXXLAVNCVNALHAISPSG-RRRDGFLAAIRRLRPRIVTVVEEEADLASSE--APEEG- 667
                LA+NCVN+L  + P G RRRD F A++RRL PR+VTVVEEEADL + +  APEE  
Sbjct: 400  ATTALAINCVNSLRGVVPGGARRRDAFAASLRRLDPRVVTVVEEEADLVAFDPGAPEESG 459

Query: 666  ---EAFVKVFEESLRFFTAYLESLEESFPRATNXXXXXXXXXXXAVVDLVSCXXXXXXXX 496
                AF+KVF E LRFF+AY++SLEESFP+ +N           A+VDLVSC        
Sbjct: 460  DTEAAFLKVFGEGLRFFSAYMDSLEESFPKTSNERLALERGAGRAIVDLVSCPASESMER 519

Query: 495  XXXXXXXXXRMRTAGFAPAAFSEDVTDDVRALLRRYREGWSMRAPAADE----AGVFLEW 328
                     RMR++GF+P AFSEDV DDVR+LLRRYREGWSMR    D+    AGVFL W
Sbjct: 520  RETAASWARRMRSSGFSPVAFSEDVADDVRSLLRRYREGWSMRDAGLDDSAAGAGVFLAW 579

Query: 327  REQAVVWASAWKP 289
            +EQ +VWASAW+P
Sbjct: 580  KEQPLVWASAWRP 592


>gb|ACN33432.1| unknown [Zea mays]
          Length = 592

 Score =  325 bits (834), Expect = 2e-86
 Identities = 181/313 (57%), Positives = 213/313 (68%), Gaps = 21/313 (6%)
 Frame = -3

Query: 1164 HVAANGAILEAFLEET-----PQRLHILDLSTTFCTQWPTLLEALATRSADDTPHLTITT 1000
            HVAANGAILE+FLE       PQRLHILDLS TFCTQWPTLLEALATRSADDTPHL+ITT
Sbjct: 280  HVAANGAILESFLEAAAASPEPQRLHILDLSNTFCTQWPTLLEALATRSADDTPHLSITT 339

Query: 999  V-----AAASSSMQRVMKEIGQRMEKFARLMGVPFRFNVIHHPXXXXXXXXXXXXXXXXX 835
            V     +A ++++QRVM+EIGQRMEKFARLMGVPF F  +HH                  
Sbjct: 340  VVSSAPSAPTAAVQRVMREIGQRMEKFARLMGVPFSFRAVHHAGDLAGLDLDALDLRDGG 399

Query: 834  XXXXLAVNCVNALHAISPSG-RRRDGFLAAIRRLRPRIVTVVEEEADLASSE--APEEG- 667
                LA+NCVN+L  + P G RRRD F A++RRL PR+VTVVEEEADL + +  APEE  
Sbjct: 400  ATTALAINCVNSLRGVVPGGARRRDAFAASLRRLDPRVVTVVEEEADLVAFDPGAPEESG 459

Query: 666  ---EAFVKVFEESLRFFTAYLESLEESFPRATNXXXXXXXXXXXAVVDLVSCXXXXXXXX 496
                AF+KVF E LRFF+AY++SLEESFP+ +N           A+VDLVSC        
Sbjct: 460  DTEAAFLKVFGEGLRFFSAYMDSLEESFPKTSNERLALERGAGRAIVDLVSCPASESMER 519

Query: 495  XXXXXXXXXRMRTAGFAPAAFSEDVTDDVRALLRRYREGWSMRAPAADE----AGVFLEW 328
                     RMR++GF+P AFSEDV DDVR+LLRRYREGWSMR    D+    AGVFL W
Sbjct: 520  RETAASWARRMRSSGFSPVAFSEDVADDVRSLLRRYREGWSMRDAGLDDSAAGAGVFLAW 579

Query: 327  REQAVVWASAWKP 289
            +EQ +VWASAW+P
Sbjct: 580  KEQPLVWASAWRP 592


>dbj|BAK02177.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 597

 Score =  323 bits (827), Expect = 1e-85
 Identities = 179/313 (57%), Positives = 209/313 (66%), Gaps = 21/313 (6%)
 Frame = -3

Query: 1164 HVAANGAILEAFLEET-----PQRLHILDLSTTFCTQWPTLLEALATRSADDTPHLTITT 1000
            HVAANGAILE+FLE       PQR HILDLS TFCTQWPTLLEALATRS DDTPHL+ITT
Sbjct: 285  HVAANGAILESFLEAAAASSEPQRFHILDLSNTFCTQWPTLLEALATRSPDDTPHLSITT 344

Query: 999  VAAA-----SSSMQRVMKEIGQRMEKFARLMGVPFRFNVIHHPXXXXXXXXXXXXXXXXX 835
            V +A     +S++QRVM+EIGQRMEKFARLMGVPFRF  +HH                  
Sbjct: 345  VVSAAPSAPTSAVQRVMREIGQRMEKFARLMGVPFRFRAVHHSGDLAELDLDSLDLREGG 404

Query: 834  XXXXLAVNCVNALHAISPSGRRRDG-FLAAIRRLRPRIVTVVEEEADL------ASSEAP 676
                +AVNC+N+L  + P G RR G F A++RRL PRIVTVVEEEADL      AS E  
Sbjct: 405  ANTGIAVNCMNSLRGVVPGGARRRGVFAASLRRLEPRIVTVVEEEADLVATDPDASDEGC 464

Query: 675  EEGEAFVKVFEESLRFFTAYLESLEESFPRATNXXXXXXXXXXXAVVDLVSCXXXXXXXX 496
            +   AF+KVF E LRFF+AY++SLEESFP+ +N           A+VDLVSC        
Sbjct: 465  DTEAAFLKVFGEGLRFFSAYMDSLEESFPKTSNERLALERGAGRAIVDLVSCPASESMER 524

Query: 495  XXXXXXXXXRMRTAGFAPAAFSEDVTDDVRALLRRYREGWSMRAPAADE----AGVFLEW 328
                     R+R+AGF+P  FSEDV DDVR+LLRRYREGWSMR  + DE    AGVFL W
Sbjct: 525  RETAAAWARRLRSAGFSPVPFSEDVADDVRSLLRRYREGWSMREASTDESAAGAGVFLAW 584

Query: 327  REQAVVWASAWKP 289
            +EQ +VWASAW+P
Sbjct: 585  KEQPLVWASAWRP 597


>ref|XP_002460941.1| hypothetical protein SORBIDRAFT_02g037890 [Sorghum bicolor]
            gi|241924318|gb|EER97462.1| hypothetical protein
            SORBIDRAFT_02g037890 [Sorghum bicolor]
          Length = 598

 Score =  323 bits (827), Expect = 1e-85
 Identities = 180/313 (57%), Positives = 209/313 (66%), Gaps = 21/313 (6%)
 Frame = -3

Query: 1164 HVAANGAILEAFLEET-----PQRLHILDLSTTFCTQWPTLLEALATRSADDTPHLTITT 1000
            HVAANGAILE+FLE       PQR HILDLS TFCTQWPTLLEALATRSADDTPHL+ITT
Sbjct: 286  HVAANGAILESFLEAAAASSEPQRFHILDLSNTFCTQWPTLLEALATRSADDTPHLSITT 345

Query: 999  VAAASSS-----MQRVMKEIGQRMEKFARLMGVPFRFNVIHHPXXXXXXXXXXXXXXXXX 835
            V +A+ S     +QRVM+EIGQRMEKFARLMGVPF F  +HH                  
Sbjct: 346  VVSAAPSAPTAAVQRVMREIGQRMEKFARLMGVPFSFRAVHHAGDLAELDLDALDLRDGG 405

Query: 834  XXXXLAVNCVNALHAISP-SGRRRDGFLAAIRRLRPRIVTVVEEEADL------ASSEAP 676
                LAVNCVN+L  + P + RRRD F A++RRL PR+VTVVEEEADL       S E+ 
Sbjct: 406  ATTALAVNCVNSLRGVVPGAARRRDAFAASLRRLDPRVVTVVEEEADLVAFDPDTSEESG 465

Query: 675  EEGEAFVKVFEESLRFFTAYLESLEESFPRATNXXXXXXXXXXXAVVDLVSCXXXXXXXX 496
            +   AF+KVF E LRFF+AY++SLEESFP+ +N           A+VDLVSC        
Sbjct: 466  DTEAAFLKVFGEGLRFFSAYMDSLEESFPKTSNERLALERGAGRAIVDLVSCPASESMER 525

Query: 495  XXXXXXXXXRMRTAGFAPAAFSEDVTDDVRALLRRYREGWSMRAPAADE----AGVFLEW 328
                     RMR+AGF+P AFSEDV DDVR+LLRRYREGWSMR    D+    AGVFL W
Sbjct: 526  RETAVSWARRMRSAGFSPVAFSEDVADDVRSLLRRYREGWSMRDAGLDDSAAGAGVFLAW 585

Query: 327  REQAVVWASAWKP 289
            +EQ +VWASAW+P
Sbjct: 586  KEQPLVWASAWRP 598


>dbj|BAC20900.1| short-root protein-like [Oryza sativa Japonica Group]
            gi|50509213|dbj|BAD30442.1| short-root protein-like
            [Oryza sativa Japonica Group]
          Length = 629

 Score =  322 bits (826), Expect = 1e-85
 Identities = 182/317 (57%), Positives = 211/317 (66%), Gaps = 25/317 (7%)
 Frame = -3

Query: 1164 HVAANGAILEAFLE------ETPQRLHILDLSTTFCTQWPTLLEALATRSADDTPHLTIT 1003
            HVAANGAILE+FLE         QR HILDLS TFCTQWPTLLEALATRSAD+TPHL+IT
Sbjct: 313  HVAANGAILESFLEVAAAASSETQRFHILDLSNTFCTQWPTLLEALATRSADETPHLSIT 372

Query: 1002 TVAAASSS-----MQRVMKEIGQRMEKFARLMGVPFRFNVIHHPXXXXXXXXXXXXXXXX 838
            TV +A+ S     +QRVM+EIGQRMEKFARLMGVPFRF  +HH                 
Sbjct: 373  TVVSAAPSAPTAAVQRVMREIGQRMEKFARLMGVPFRFRAVHHSGDLAELDLDALDLREG 432

Query: 837  XXXXXLAVNCVNALHAISPS-GRRRDGFLAAIRRLRPRIVTVVEEEADLASSE-----AP 676
                 LAVNCVN+L  + P   RRRD F A++RRL PR+VTVVEEEADL +S+     A 
Sbjct: 433  GATTALAVNCVNSLRGVVPGRARRRDAFAASLRRLDPRVVTVVEEEADLVASDPDASSAT 492

Query: 675  EEG----EAFVKVFEESLRFFTAYLESLEESFPRATNXXXXXXXXXXXAVVDLVSCXXXX 508
            EEG     AF+KVF E LRFF+AY++SLEESFP+ +N           A+VDLVSC    
Sbjct: 493  EEGGDTEAAFLKVFGEGLRFFSAYMDSLEESFPKTSNERLALERGAGRAIVDLVSCPASE 552

Query: 507  XXXXXXXXXXXXXRMRTAGFAPAAFSEDVTDDVRALLRRYREGWSMRAPAADE----AGV 340
                         RMR+AGF+P AFSEDV DDVR+LLRRYREGWSMR    D+    AGV
Sbjct: 553  SMERRETAASWARRMRSAGFSPVAFSEDVADDVRSLLRRYREGWSMREAGTDDSAAGAGV 612

Query: 339  FLEWREQAVVWASAWKP 289
            FL W+EQ +VWASAW+P
Sbjct: 613  FLAWKEQPLVWASAWRP 629


>sp|A2YN56.1|SHR1_ORYSI RecName: Full=Protein SHORT-ROOT 1; AltName: Full=OsSHR1
            gi|125558981|gb|EAZ04517.1| hypothetical protein
            OsI_26668 [Oryza sativa Indica Group]
          Length = 602

 Score =  322 bits (826), Expect = 1e-85
 Identities = 182/317 (57%), Positives = 211/317 (66%), Gaps = 25/317 (7%)
 Frame = -3

Query: 1164 HVAANGAILEAFLE------ETPQRLHILDLSTTFCTQWPTLLEALATRSADDTPHLTIT 1003
            HVAANGAILE+FLE         QR HILDLS TFCTQWPTLLEALATRSAD+TPHL+IT
Sbjct: 286  HVAANGAILESFLEVAAAASSETQRFHILDLSNTFCTQWPTLLEALATRSADETPHLSIT 345

Query: 1002 TVAAASSS-----MQRVMKEIGQRMEKFARLMGVPFRFNVIHHPXXXXXXXXXXXXXXXX 838
            TV +A+ S     +QRVM+EIGQRMEKFARLMGVPFRF  +HH                 
Sbjct: 346  TVVSAAPSAPTAAVQRVMREIGQRMEKFARLMGVPFRFRAVHHSGDLAELDLDALDLREG 405

Query: 837  XXXXXLAVNCVNALHAISPS-GRRRDGFLAAIRRLRPRIVTVVEEEADLASSE-----AP 676
                 LAVNCVN+L  + P   RRRD F A++RRL PR+VTVVEEEADL +S+     A 
Sbjct: 406  GATTALAVNCVNSLRGVVPGRARRRDAFAASLRRLDPRVVTVVEEEADLVASDPDASSAT 465

Query: 675  EEG----EAFVKVFEESLRFFTAYLESLEESFPRATNXXXXXXXXXXXAVVDLVSCXXXX 508
            EEG     AF+KVF E LRFF+AY++SLEESFP+ +N           A+VDLVSC    
Sbjct: 466  EEGGDTEAAFLKVFGEGLRFFSAYMDSLEESFPKTSNERLALERGAGRAIVDLVSCPASE 525

Query: 507  XXXXXXXXXXXXXRMRTAGFAPAAFSEDVTDDVRALLRRYREGWSMRAPAADE----AGV 340
                         RMR+AGF+P AFSEDV DDVR+LLRRYREGWSMR    D+    AGV
Sbjct: 526  SMERRETAASWARRMRSAGFSPVAFSEDVADDVRSLLRRYREGWSMREAGTDDSAAGAGV 585

Query: 339  FLEWREQAVVWASAWKP 289
            FL W+EQ +VWASAW+P
Sbjct: 586  FLAWKEQPLVWASAWRP 602


>ref|NP_001060133.1| Os07g0586900 [Oryza sativa Japonica Group]
            gi|182691590|sp|Q8H2X8.2|SHR1_ORYSJ RecName: Full=Protein
            SHORT-ROOT 1; AltName: Full=OsSHR1
            gi|113611669|dbj|BAF22047.1| Os07g0586900 [Oryza sativa
            Japonica Group] gi|215768016|dbj|BAH00245.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 602

 Score =  322 bits (826), Expect = 1e-85
 Identities = 182/317 (57%), Positives = 211/317 (66%), Gaps = 25/317 (7%)
 Frame = -3

Query: 1164 HVAANGAILEAFLE------ETPQRLHILDLSTTFCTQWPTLLEALATRSADDTPHLTIT 1003
            HVAANGAILE+FLE         QR HILDLS TFCTQWPTLLEALATRSAD+TPHL+IT
Sbjct: 286  HVAANGAILESFLEVAAAASSETQRFHILDLSNTFCTQWPTLLEALATRSADETPHLSIT 345

Query: 1002 TVAAASSS-----MQRVMKEIGQRMEKFARLMGVPFRFNVIHHPXXXXXXXXXXXXXXXX 838
            TV +A+ S     +QRVM+EIGQRMEKFARLMGVPFRF  +HH                 
Sbjct: 346  TVVSAAPSAPTAAVQRVMREIGQRMEKFARLMGVPFRFRAVHHSGDLAELDLDALDLREG 405

Query: 837  XXXXXLAVNCVNALHAISPS-GRRRDGFLAAIRRLRPRIVTVVEEEADLASSE-----AP 676
                 LAVNCVN+L  + P   RRRD F A++RRL PR+VTVVEEEADL +S+     A 
Sbjct: 406  GATTALAVNCVNSLRGVVPGRARRRDAFAASLRRLDPRVVTVVEEEADLVASDPDASSAT 465

Query: 675  EEG----EAFVKVFEESLRFFTAYLESLEESFPRATNXXXXXXXXXXXAVVDLVSCXXXX 508
            EEG     AF+KVF E LRFF+AY++SLEESFP+ +N           A+VDLVSC    
Sbjct: 466  EEGGDTEAAFLKVFGEGLRFFSAYMDSLEESFPKTSNERLALERGAGRAIVDLVSCPASE 525

Query: 507  XXXXXXXXXXXXXRMRTAGFAPAAFSEDVTDDVRALLRRYREGWSMRAPAADE----AGV 340
                         RMR+AGF+P AFSEDV DDVR+LLRRYREGWSMR    D+    AGV
Sbjct: 526  SMERRETAASWARRMRSAGFSPVAFSEDVADDVRSLLRRYREGWSMREAGTDDSAAGAGV 585

Query: 339  FLEWREQAVVWASAWKP 289
            FL W+EQ +VWASAW+P
Sbjct: 586  FLAWKEQPLVWASAWRP 602


>sp|A2XIA8.1|SHR2_ORYSI RecName: Full=Protein SHORT-ROOT 2; AltName: Full=OsSHR2
            gi|125544429|gb|EAY90568.1| hypothetical protein
            OsI_12169 [Oryza sativa Indica Group]
          Length = 603

 Score =  319 bits (817), Expect = 2e-84
 Identities = 183/325 (56%), Positives = 209/325 (64%), Gaps = 33/325 (10%)
 Frame = -3

Query: 1164 HVAANGAILEAFLEET-----------------PQRLHILDLSTTFCTQWPTLLEALATR 1036
            HVAANGAILE+FLE                   P RLHILDLS TFCTQWPTLLEALATR
Sbjct: 282  HVAANGAILESFLEAAAAGAAAASSSSSSSSTPPTRLHILDLSNTFCTQWPTLLEALATR 341

Query: 1035 SADDTPHLTITTV---AAASSSMQRVMKEIGQRMEKFARLMGVPFRFNVIHHPXXXXXXX 865
            S+DDTPHL+ITTV   AA S++ QRVM+EIGQR+EKFARLMGVPF F  +HH        
Sbjct: 342  SSDDTPHLSITTVVPTAAPSAAAQRVMREIGQRLEKFARLMGVPFSFRAVHHAGDLADLD 401

Query: 864  XXXXXXXXXXXXXXLAVNCVNALHAISPSGRRRDGFLAAIRRLRPRIVTVVEEEADLASS 685
                          LAVNCVNAL  ++   R RD F+A++RRL PR+VTVVEEEADLA+ 
Sbjct: 402  LAALDLREGGATAALAVNCVNALRGVA---RGRDAFVASLRRLEPRVVTVVEEEADLAAP 458

Query: 684  EAPEEGE-----AFVKVFEESLRFFTAYLESLEESFPRATNXXXXXXXXXXXAVVDLVSC 520
            EA    E     AFVKVF E LRFF+AY++SLEESFP+ +N           A+VDLVSC
Sbjct: 459  EADASSEADTDAAFVKVFGEGLRFFSAYMDSLEESFPKTSNERLSLERAVGRAIVDLVSC 518

Query: 519  XXXXXXXXXXXXXXXXXRMRTAGFAPAAFSEDVTDDVRALLRRYREGWSMR--------A 364
                             RMR+AGF+PAAFSEDV DDVR+LLRRY+EGWSMR        A
Sbjct: 519  PASQSAERRETAASWARRMRSAGFSPAAFSEDVADDVRSLLRRYKEGWSMRDAGGATDDA 578

Query: 363  PAADEAGVFLEWREQAVVWASAWKP 289
              A  AG FL W+EQ VVWASAWKP
Sbjct: 579  AGAAAAGAFLAWKEQPVVWASAWKP 603


>ref|NP_001173487.1| Os03g0433200 [Oryza sativa Japonica Group]
            gi|75137668|sp|Q75I13.1|SHR2_ORYSJ RecName: Full=Protein
            SHORT-ROOT 2; AltName: Full=OsSHR2
            gi|41469537|gb|AAS07303.1| putative GRAS family
            transcription factor [Oryza sativa Japonica Group]
            gi|108708985|gb|ABF96780.1| GRAS family transcription
            factor containing protein, expressed [Oryza sativa
            Japonica Group] gi|255674615|dbj|BAH92215.1| Os03g0433200
            [Oryza sativa Japonica Group]
          Length = 603

 Score =  319 bits (817), Expect = 2e-84
 Identities = 183/325 (56%), Positives = 209/325 (64%), Gaps = 33/325 (10%)
 Frame = -3

Query: 1164 HVAANGAILEAFLEET-----------------PQRLHILDLSTTFCTQWPTLLEALATR 1036
            HVAANGAILE+FLE                   P RLHILDLS TFCTQWPTLLEALATR
Sbjct: 282  HVAANGAILESFLEAAAAGAAASSSSSSSSSTPPTRLHILDLSNTFCTQWPTLLEALATR 341

Query: 1035 SADDTPHLTITTV---AAASSSMQRVMKEIGQRMEKFARLMGVPFRFNVIHHPXXXXXXX 865
            S+DDTPHL+ITTV   AA S++ QRVM+EIGQR+EKFARLMGVPF F  +HH        
Sbjct: 342  SSDDTPHLSITTVVPTAAPSAAAQRVMREIGQRLEKFARLMGVPFSFRAVHHSGDLADLD 401

Query: 864  XXXXXXXXXXXXXXLAVNCVNALHAISPSGRRRDGFLAAIRRLRPRIVTVVEEEADLASS 685
                          LAVNCVNAL  ++   R RD F+A++RRL PR+VTVVEEEADLA+ 
Sbjct: 402  LAALDLREGGATAALAVNCVNALRGVA---RGRDAFVASLRRLEPRVVTVVEEEADLAAP 458

Query: 684  EAPEEGE-----AFVKVFEESLRFFTAYLESLEESFPRATNXXXXXXXXXXXAVVDLVSC 520
            EA    E     AFVKVF E LRFF+AY++SLEESFP+ +N           A+VDLVSC
Sbjct: 459  EADASSEADTDAAFVKVFGEGLRFFSAYMDSLEESFPKTSNERLSLERAVGRAIVDLVSC 518

Query: 519  XXXXXXXXXXXXXXXXXRMRTAGFAPAAFSEDVTDDVRALLRRYREGWSMR--------A 364
                             RMR+AGF+PAAFSEDV DDVR+LLRRY+EGWSMR        A
Sbjct: 519  PASQSAERRETAASWARRMRSAGFSPAAFSEDVADDVRSLLRRYKEGWSMRDAGGATDDA 578

Query: 363  PAADEAGVFLEWREQAVVWASAWKP 289
              A  AG FL W+EQ VVWASAWKP
Sbjct: 579  AGAAAAGAFLAWKEQPVVWASAWKP 603


>tpg|DAA41268.1| TPA: hypothetical protein ZEAMMB73_913831 [Zea mays]
          Length = 586

 Score =  318 bits (815), Expect = 3e-84
 Identities = 177/316 (56%), Positives = 208/316 (65%), Gaps = 24/316 (7%)
 Frame = -3

Query: 1164 HVAANGAILEAFLEET-----PQRLHILDLSTTFCTQWPTLLEALATRSADDTPHLTITT 1000
            HVAANGAILE+FLE       PQR HILDLS TFCTQWPTLLEALATRS DDTPHL+ITT
Sbjct: 271  HVAANGAILESFLEAAAASSEPQRFHILDLSNTFCTQWPTLLEALATRSTDDTPHLSITT 330

Query: 999  VAAASSS--------MQRVMKEIGQRMEKFARLMGVPFRFNVIHHPXXXXXXXXXXXXXX 844
            V +A+ S         QRVM+EIGQR+EKFARLMGVPF F  +HH               
Sbjct: 331  VVSAAPSAPTVAVQRRQRVMREIGQRIEKFARLMGVPFSFRAVHHAGDLAELDLDALDLR 390

Query: 843  XXXXXXXLAVNCVNALHAISPSG-RRRDGFLAAIRRLRPRIVTVVEEEADL------ASS 685
                   LA+NC+N+L  + P G RRRD F A++RRL PR+VTVVEEEADL      AS 
Sbjct: 391  DGGATTALAINCLNSLRGVVPGGVRRRDAFGASLRRLDPRVVTVVEEEADLVAFDPDASE 450

Query: 684  EAPEEGEAFVKVFEESLRFFTAYLESLEESFPRATNXXXXXXXXXXXAVVDLVSCXXXXX 505
            E+ +   AF+KVF E LRFF+AY++SLEESFP+ +N           A+VDLVSC     
Sbjct: 451  ESGDTEAAFLKVFGEGLRFFSAYMDSLEESFPKTSNERLALERGAGRAIVDLVSCPPSKS 510

Query: 504  XXXXXXXXXXXXRMRTAGFAPAAFSEDVTDDVRALLRRYREGWSMRAPAADE----AGVF 337
                        RMR+AGF+P AFSEDV DDVR+LLRRYREGWSMR    D+    AG+F
Sbjct: 511  MERRETAVSWARRMRSAGFSPVAFSEDVADDVRSLLRRYREGWSMRDTGLDDSAAGAGIF 570

Query: 336  LEWREQAVVWASAWKP 289
            L W+EQ +VWASAW+P
Sbjct: 571  LAWKEQPLVWASAWRP 586


>ref|XP_006658750.1| PREDICTED: protein SHORT-ROOT 1-like [Oryza brachyantha]
          Length = 395

 Score =  317 bits (812), Expect = 6e-84
 Identities = 177/314 (56%), Positives = 207/314 (65%), Gaps = 22/314 (7%)
 Frame = -3

Query: 1164 HVAANGAILEAFLE------ETPQRLHILDLSTTFCTQWPTLLEALATRSADDTPHLTIT 1003
            HVAANGAILE+FLE         QR HILDLS TFCTQWPTLLEALATRSAD+TPHL+IT
Sbjct: 82   HVAANGAILESFLEVAAAASSETQRFHILDLSNTFCTQWPTLLEALATRSADETPHLSIT 141

Query: 1002 TVAAASSS-----MQRVMKEIGQRMEKFARLMGVPFRFNVIHHPXXXXXXXXXXXXXXXX 838
            TV +A+ S     +QRVM+EIGQRMEKFARLMGVPFRF  +HH                 
Sbjct: 142  TVVSAAPSAPTAAVQRVMREIGQRMEKFARLMGVPFRFRAVHHSGDLAELDLDALDLREG 201

Query: 837  XXXXXLAVNCVNALHAISP-SGRRRDGFLAAIRRLRPRIVTVVEEEADL------ASSEA 679
                 LAVNCVN+L  + P   RRRD F A++R+L PR+VTVVEEEADL      AS E 
Sbjct: 202  GATTALAVNCVNSLRGVVPGKARRRDAFAASLRKLDPRVVTVVEEEADLVACDPDASEEG 261

Query: 678  PEEGEAFVKVFEESLRFFTAYLESLEESFPRATNXXXXXXXXXXXAVVDLVSCXXXXXXX 499
             +   AF+KVF E LRFF+AY++SLEESFP+ +N           A+VDLVSC       
Sbjct: 262  GDTEAAFLKVFGEGLRFFSAYMDSLEESFPKTSNERLALERGAGRAIVDLVSCPASESME 321

Query: 498  XXXXXXXXXXRMRTAGFAPAAFSEDVTDDVRALLRRYREGWSMRAPAADE----AGVFLE 331
                      RMR+AGF+P  FSEDV DDVR+LLRRYREGWSMR    ++    AGVFL 
Sbjct: 322  RRETAAAWARRMRSAGFSPVPFSEDVADDVRSLLRRYREGWSMREAGTEDSAAGAGVFLA 381

Query: 330  WREQAVVWASAWKP 289
            W+EQ +VWASAW+P
Sbjct: 382  WKEQPLVWASAWRP 395


>ref|XP_004983931.1| PREDICTED: protein SHORT-ROOT 2-like [Setaria italica]
          Length = 635

 Score =  317 bits (811), Expect = 8e-84
 Identities = 177/322 (54%), Positives = 210/322 (65%), Gaps = 30/322 (9%)
 Frame = -3

Query: 1164 HVAANGAILEAFLEET--------------PQRLHILDLSTTFCTQWPTLLEALATRSAD 1027
            HVAANGAILEAFLE                P RLHILDLS TFCTQWPTLLEALATRS+D
Sbjct: 316  HVAANGAILEAFLEAAAAAASSSSSSSSSQPPRLHILDLSNTFCTQWPTLLEALATRSSD 375

Query: 1026 DTPHLTITTV----AAASSSMQRVMKEIGQRMEKFARLMGVPFRFNVIHHPXXXXXXXXX 859
            DTPHL+ITTV    A +S++ QRVM+EI QR+EKFARLMGVPF F  +HH          
Sbjct: 376  DTPHLSITTVVPAAAPSSAAAQRVMREIAQRLEKFARLMGVPFSFRAVHH--AGDLAELD 433

Query: 858  XXXXXXXXXXXXLAVNCVNALHAISPSG-RRRDGFLAAIRRLRPRIVTVVEEEADL---- 694
                        LA+NCVNAL  ++P G R+RD FLA++RRL PR+VTVVEE+ADL    
Sbjct: 434  LDGLGLREGGAALAINCVNALRGVAPGGARQRDAFLASLRRLEPRVVTVVEEDADLVEPD 493

Query: 693  ----ASSEAPEEGEAFVKVFEESLRFFTAYLESLEESFPRATNXXXXXXXXXXXAVVDLV 526
                +S EA     AF+KVF E LRFF+AY++SLEESFP+ +N           A+VDLV
Sbjct: 494  PDASSSEEAASTEAAFIKVFTEGLRFFSAYMDSLEESFPKTSNERLVLERAAGRAIVDLV 553

Query: 525  SCXXXXXXXXXXXXXXXXXRMRTAGFAPAAFSEDVTDDVRALLRRYREGWSMRAPAADE- 349
            SC                 RMR+AGF+P AFS+DV DD+R+LLRRYREGWS+R P  D+ 
Sbjct: 554  SCPASESAERRETGASWARRMRSAGFSPVAFSDDVADDMRSLLRRYREGWSLREPGTDDG 613

Query: 348  --AGVFLEWREQAVVWASAWKP 289
              AGVFL W+EQ VVW SAW+P
Sbjct: 614  AAAGVFLAWKEQPVVWTSAWRP 635


>ref|XP_002467655.1| hypothetical protein SORBIDRAFT_01g031720 [Sorghum bicolor]
            gi|241921509|gb|EER94653.1| hypothetical protein
            SORBIDRAFT_01g031720 [Sorghum bicolor]
          Length = 664

 Score =  315 bits (807), Expect = 2e-83
 Identities = 180/334 (53%), Positives = 215/334 (64%), Gaps = 42/334 (12%)
 Frame = -3

Query: 1164 HVAANGAILEAFLE--------------------ETPQRLHILDLSTTFCTQWPTLLEAL 1045
            HVAANGAILEAFLE                    + P RLHILDLS TFCTQWPTLLEAL
Sbjct: 331  HVAANGAILEAFLEASAAGAAAASSSTSSSSSQQQQPPRLHILDLSNTFCTQWPTLLEAL 390

Query: 1044 ATRSADDTPHLTITTV----AAASSSMQRVMKEIGQRMEKFARLMGVPFRFNVIHHP--- 886
            ATRS+DDTPHL+ITTV    A  S++ QRVM+EI QR+EKFARLMGVPF F  +HH    
Sbjct: 391  ATRSSDDTPHLSITTVVPTAAPGSAAAQRVMREIAQRLEKFARLMGVPFTFRAVHHAGDL 450

Query: 885  XXXXXXXXXXXXXXXXXXXXXLAVNCVNALHAISPSG-RRRDGFLAAIRRLRPRIVTVVE 709
                                 LA+NCVNAL  ++P G RRRD F+A++RRL PR+VTVVE
Sbjct: 451  AELDLDGLDLRREGEGGATTALAINCVNALRGVAPGGARRRDAFVASLRRLEPRVVTVVE 510

Query: 708  EEADL----------ASSEAPEEGE-AFVKVFEESLRFFTAYLESLEESFPRATNXXXXX 562
            E+ADL          +S+ A EE E AF+KVF E LRFF+AY++SLEESFP+A+N     
Sbjct: 511  EDADLVAASDESSSSSSAAAAEEAEAAFMKVFTEGLRFFSAYMDSLEESFPKASNERLAL 570

Query: 561  XXXXXXAVVDLVSCXXXXXXXXXXXXXXXXXRMRTAGFAPAAFSEDVTDDVRALLRRYRE 382
                  A+VDLVSC                 RMR+AGF+P AFS+DV DD+R+LLRRYRE
Sbjct: 571  ERAAGRAIVDLVSCPASESVERRETGASWARRMRSAGFSPVAFSDDVADDMRSLLRRYRE 630

Query: 381  GWSMRAPAADE---AGVFLEWREQAVVWASAWKP 289
            GW++R P AD+   AGVFL W+EQ VVW SAW+P
Sbjct: 631  GWTLREPGADDGVAAGVFLAWKEQPVVWTSAWRP 664


>tpg|DAA45910.1| TPA: hypothetical protein ZEAMMB73_781034 [Zea mays]
          Length = 630

 Score =  312 bits (800), Expect = 1e-82
 Identities = 172/324 (53%), Positives = 211/324 (65%), Gaps = 32/324 (9%)
 Frame = -3

Query: 1164 HVAANGAILEAFLE-------------ETPQRLHILDLSTTFCTQWPTLLEALATRSADD 1024
            HVAANGAILE+FL+             + P RLHILDLS TFCTQWPTLLEALATRS+DD
Sbjct: 307  HVAANGAILESFLDAAAAAAASSSSSSQHPPRLHILDLSNTFCTQWPTLLEALATRSSDD 366

Query: 1023 TPHLTITTV-----AAASSSMQRVMKEIGQRMEKFARLMGVPFRFNVIHH--PXXXXXXX 865
            TPHL+ITTV       +S++ QRVM+EI QR+EKFARLMGVPF F  +HH          
Sbjct: 367  TPHLSITTVVPTAGVPSSAAAQRVMREIAQRLEKFARLMGVPFSFRAVHHAGDLAGLDLD 426

Query: 864  XXXXXXXXXXXXXXLAVNCVNALHAISPSG-RRRDGFLAAIRRLRPRIVTVVEEEADLAS 688
                          LA+NCVNAL  ++P G RRRD F+A++RRL PR+VTVVEE+ADL +
Sbjct: 427  GLGLGLREGGAATALAINCVNALRGVAPGGARRRDAFVASLRRLEPRVVTVVEEDADLVA 486

Query: 687  SEAPEEGE--------AFVKVFEESLRFFTAYLESLEESFPRATNXXXXXXXXXXXAVVD 532
            +  P            AF+KVF E LRFF+AY++SLEESFP+A+N           A+VD
Sbjct: 487  ASEPSSSSAGEADAEAAFMKVFTEGLRFFSAYMDSLEESFPKASNERLALERAAGRAIVD 546

Query: 531  LVSCXXXXXXXXXXXXXXXXXRMRTAGFAPAAFSEDVTDDVRALLRRYREGWSMRAPAAD 352
            LV+C                 RMR+AGF+P AFS+DV DD+R+LLRRYREGW++R P AD
Sbjct: 547  LVACPASESVERRETGASWARRMRSAGFSPVAFSDDVADDMRSLLRRYREGWTLREPGAD 606

Query: 351  E---AGVFLEWREQAVVWASAWKP 289
            +   AGVFL W+EQ VVW SAW+P
Sbjct: 607  DGAAAGVFLAWKEQPVVWTSAWRP 630


>ref|XP_003562791.1| PREDICTED: protein SHORT-ROOT 1-like [Brachypodium distachyon]
          Length = 610

 Score =  312 bits (800), Expect = 1e-82
 Identities = 175/319 (54%), Positives = 206/319 (64%), Gaps = 27/319 (8%)
 Frame = -3

Query: 1164 HVAANGAILEAFLEET-------PQRLHILDLSTTFCTQWPTLLEALATRSADDTPHLTI 1006
            HVAANGAILE+FLE         PQR HILDLS TFCTQWPTLLEALATRS DDTPHL+I
Sbjct: 294  HVAANGAILESFLEAAAAAPSSEPQRFHILDLSNTFCTQWPTLLEALATRSPDDTPHLSI 353

Query: 1005 TTV------AAASSSMQRVMKEIGQRMEKFARLMGVPFRFNVIHHPXXXXXXXXXXXXXX 844
            TTV      AA+S ++QRVM+EIGQRMEKFARLMGVPFRF  +HH               
Sbjct: 354  TTVHVSSSSAASSPAVQRVMREIGQRMEKFARLMGVPFRFRAVHHSGDLAELDLDALDVR 413

Query: 843  XXXXXXXLAVNCVNALHAISPSGRRRDGFLAAIRRLRPRIVTVVEEEADL---------A 691
                   +AVNCVN+L  +    RRR  F A +RRL PR+VTVVEEEAD          A
Sbjct: 414  EGGATTGIAVNCVNSLRGV--GARRRGEFAALLRRLGPRVVTVVEEEADFVADSDHHRSA 471

Query: 690  SSEAPEEGEAFVKVFEESLRFFTAYLESLEESFPRATNXXXXXXXXXXXAVVDLVSCXXX 511
              +A  +  AF+KVF E LRFF+AY++SLEESFP+ +N           A+VDLVSC   
Sbjct: 472  DQDAETDQAAFLKVFGEGLRFFSAYMDSLEESFPKTSNERLALERGAGRAIVDLVSCPAS 531

Query: 510  XXXXXXXXXXXXXXRMRTAGFAPAAFSEDVTDDVRALLRRYREGWSMRAPAADE-----A 346
                          R+R AGF+P AFS+DV DDVR+LLRRYREGWSMR   A++     A
Sbjct: 532  ESMERRETAAAWARRLRCAGFSPVAFSDDVADDVRSLLRRYREGWSMRDAGAEDSAAAGA 591

Query: 345  GVFLEWREQAVVWASAWKP 289
            GVFL+W+EQ +VWASAW+P
Sbjct: 592  GVFLQWKEQPLVWASAWRP 610


>gb|EEE59318.1| hypothetical protein OsJ_11379 [Oryza sativa Japonica Group]
          Length = 584

 Score =  306 bits (784), Expect = 1e-80
 Identities = 181/325 (55%), Positives = 206/325 (63%), Gaps = 33/325 (10%)
 Frame = -3

Query: 1164 HVAANGAILEAFLEET-----------------PQRLHILDLSTTFCTQWPTLLEALATR 1036
            HVAANGAILE+FLE                   P RLHILDLS TFCTQWPTLLEALATR
Sbjct: 282  HVAANGAILESFLEAAAAGAAASSSSSSSSSTPPTRLHILDLSNTFCTQWPTLLEALATR 341

Query: 1035 SADDTPHLTITTV---AAASSSMQRVMKEIGQRMEKFARLMGVPFRFNVIHHPXXXXXXX 865
            S+DDTPHL+ITTV   AA S++ QRVM+EIGQR+EKFARLMGVPF F             
Sbjct: 342  SSDDTPHLSITTVVPTAAPSAAAQRVMREIGQRLEKFARLMGVPFSFRA----------- 390

Query: 864  XXXXXXXXXXXXXXLAVNCVNALHAISPSGRRRDGFLAAIRRLRPRIVTVVEEEADLASS 685
                          LAVNCVNAL  ++   R RD F+A++RRL PR+VTVVEEEADLA+ 
Sbjct: 391  --------GGATAALAVNCVNALRGVA---RGRDAFVASLRRLEPRVVTVVEEEADLAAP 439

Query: 684  EAPEEGE-----AFVKVFEESLRFFTAYLESLEESFPRATNXXXXXXXXXXXAVVDLVSC 520
            EA    E     AFVKVF E LRFF+AY++SLEESFP+ +N           A+VDLVSC
Sbjct: 440  EADASSEADTDAAFVKVFGEGLRFFSAYMDSLEESFPKTSNERLSLERAVGRAIVDLVSC 499

Query: 519  XXXXXXXXXXXXXXXXXRMRTAGFAPAAFSEDVTDDVRALLRRYREGWSMR--------A 364
                             RMR+AGF+PAAFSEDV DDVR+LLRRY+EGWSMR        A
Sbjct: 500  PASQSAERRETAASWARRMRSAGFSPAAFSEDVADDVRSLLRRYKEGWSMRDAGGATDDA 559

Query: 363  PAADEAGVFLEWREQAVVWASAWKP 289
              A  AG FL W+EQ VVWASAWKP
Sbjct: 560  AGAAAAGAFLAWKEQPVVWASAWKP 584


>ref|XP_004231927.1| PREDICTED: protein SHORT-ROOT-like [Solanum lycopersicum]
          Length = 507

 Score =  283 bits (723), Expect = 1e-73
 Identities = 151/296 (51%), Positives = 194/296 (65%), Gaps = 4/296 (1%)
 Frame = -3

Query: 1164 HVAANGAILEAFLEETPQRLHILDLSTTFCTQWPTLLEALATRSADDTPHLTITTVAAAS 985
            HVA+NGAI+EA   E   +LHI+D+S T+CTQWPTLLEALATR+ D+TPHL +TTV AA+
Sbjct: 221  HVASNGAIMEAL--EGESKLHIIDISNTYCTQWPTLLEALATRT-DETPHLRLTTVVAAA 277

Query: 984  S----SMQRVMKEIGQRMEKFARLMGVPFRFNVIHHPXXXXXXXXXXXXXXXXXXXXXLA 817
            S    S+Q+VMKEIG RMEKFARLMGVPF+FNVIHH                      LA
Sbjct: 278  SGGAASVQKVMKEIGSRMEKFARLMGVPFKFNVIHH---VGNLSELDMGALDIKEEEALA 334

Query: 816  VNCVNALHAISPSGRRRDGFLAAIRRLRPRIVTVVEEEADLASSEAPEEGEAFVKVFEES 637
            +NC+ ALH+++P+G RRD  ++  RRL+PRIVT+VEEEADL   +   +G  FV  F+E 
Sbjct: 335  INCIGALHSVTPAGNRRDYLISLFRRLQPRIVTIVEEEADL---DVGVDGFDFVNGFQEC 391

Query: 636  LRFFTAYLESLEESFPRATNXXXXXXXXXXXAVVDLVSCXXXXXXXXXXXXXXXXXRMRT 457
            L++   Y ESL+ESF + +N           ++VDL++C                 RM  
Sbjct: 392  LKWIRVYFESLDESFSKTSNERLMLERQAGRSIVDLLACPPSESMERRETGAKWSHRMHA 451

Query: 456  AGFAPAAFSEDVTDDVRALLRRYREGWSMRAPAADEAGVFLEWREQAVVWASAWKP 289
             GF+P  +S++V DDVRALLRRY++GWSM     D AG+FL W+EQ VVWASAWKP
Sbjct: 452  GGFSPVLYSDEVCDDVRALLRRYKDGWSMGQCGGDSAGIFLSWKEQPVVWASAWKP 507


>ref|XP_006363828.1| PREDICTED: protein SHORT-ROOT-like [Solanum tuberosum]
          Length = 515

 Score =  281 bits (720), Expect = 3e-73
 Identities = 150/295 (50%), Positives = 193/295 (65%), Gaps = 3/295 (1%)
 Frame = -3

Query: 1164 HVAANGAILEAFLEETPQRLHILDLSTTFCTQWPTLLEALATRSADDTPHLTITTVAAAS 985
            HVA+NGAI+EA   E   +LHI+D+S T+CTQWPTLLEALATR+ D+TPHL +TTV AAS
Sbjct: 230  HVASNGAIMEAL--EGESKLHIIDISNTYCTQWPTLLEALATRT-DETPHLRLTTVVAAS 286

Query: 984  ---SSMQRVMKEIGQRMEKFARLMGVPFRFNVIHHPXXXXXXXXXXXXXXXXXXXXXLAV 814
               +S+Q+VMKEIG RMEKFARLMGVPF+FNVIHH                       A+
Sbjct: 287  RGAASVQKVMKEIGSRMEKFARLMGVPFKFNVIHHAGNLSELDIGALDIKEDEAL---AI 343

Query: 813  NCVNALHAISPSGRRRDGFLAAIRRLRPRIVTVVEEEADLASSEAPEEGEAFVKVFEESL 634
            NC+ ALH+++P+G RRD  ++  RRL+PRIVT+VEEEADL   +   +G  FVK F+E L
Sbjct: 344  NCIGALHSVTPAGNRRDYLISLFRRLQPRIVTIVEEEADL---DVGVDGFDFVKGFQECL 400

Query: 633  RFFTAYLESLEESFPRATNXXXXXXXXXXXAVVDLVSCXXXXXXXXXXXXXXXXXRMRTA 454
            ++   Y ESL+ESF + +N           ++VDL++C                 RM   
Sbjct: 401  KWLRVYFESLDESFSKTSNERLMLERQAGRSIVDLLACPPSESMERRETGAKWSHRMHAG 460

Query: 453  GFAPAAFSEDVTDDVRALLRRYREGWSMRAPAADEAGVFLEWREQAVVWASAWKP 289
            GF+   +S++V DDVRALLRRY++GWSM     D AG+FL W+EQ VVWASAWKP
Sbjct: 461  GFSQLLYSDEVCDDVRALLRRYKDGWSMGQCGGDSAGIFLSWKEQPVVWASAWKP 515


>ref|XP_003611578.1| GRAS family transcription factor [Medicago truncatula]
            gi|355512913|gb|AES94536.1| GRAS family transcription
            factor [Medicago truncatula]
          Length = 491

 Score =  280 bits (715), Expect = 1e-72
 Identities = 158/298 (53%), Positives = 188/298 (63%), Gaps = 6/298 (2%)
 Frame = -3

Query: 1164 HVAANGAILEAFLEETPQRLHILDLSTTFCTQWPTLLEALATRSADDTPHLTITTVAAAS 985
            HVA NGAILEAF  E   +LHI+D+S T+CTQWPTL EALATR ADDTPHL +TT+  A 
Sbjct: 205  HVACNGAILEAF--EGDSKLHIIDISNTYCTQWPTLFEALATR-ADDTPHLRLTTIVTAG 261

Query: 984  SSMQRVMKEIGQRMEKFARLMGVPFRFNVIHHPXXXXXXXXXXXXXXXXXXXXXLAVNCV 805
             S+Q+VMKEIG RMEKFARLMGVPF+FNVIHH                      LAVNCV
Sbjct: 262  GSVQKVMKEIGARMEKFARLMGVPFKFNVIHH---SGDLSDLNFLDLDIKEDEALAVNCV 318

Query: 804  NALHAIS------PSGRRRDGFLAAIRRLRPRIVTVVEEEADLASSEAPEEGEAFVKVFE 643
            NALH+++          RRD  +A++  LRPRIVT+VEEEADL       EG  FV  FE
Sbjct: 319  NALHSVTVGNGNGNGNNRRDSLIASLIALRPRIVTMVEEEADL---NFGNEGYEFVNGFE 375

Query: 642  ESLRFFTAYLESLEESFPRATNXXXXXXXXXXXAVVDLVSCXXXXXXXXXXXXXXXXXRM 463
            E LR+F  Y E+LEESFP+ +N            +VDLV+C                 R+
Sbjct: 376  ECLRWFRVYFEALEESFPKTSNERLMLEREAGRGIVDLVACAPAESIERRETAVRWSRRL 435

Query: 462  RTAGFAPAAFSEDVTDDVRALLRRYREGWSMRAPAADEAGVFLEWREQAVVWASAWKP 289
               GF   AFSE+V DDVRALLRRY+EGWSM     ++AG+FL W+EQ VVWASAW+P
Sbjct: 436  HGRGFNTVAFSEEVCDDVRALLRRYKEGWSM--IRCNDAGIFLTWKEQPVVWASAWRP 491