BLASTX nr result
ID: Zingiber23_contig00013254
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00013254
(230 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004951718.1| PREDICTED: probable small nuclear ribonucleo... 113 3e-23
ref|NP_001068396.1| Os11g0657300 [Oryza sativa Japonica Group] g... 113 3e-23
ref|NP_001046068.1| Os02g0177500 [Oryza sativa Japonica Group] g... 113 3e-23
ref|XP_003570509.1| PREDICTED: probable small nuclear ribonucleo... 113 3e-23
ref|XP_003563369.1| PREDICTED: probable small nuclear ribonucleo... 113 3e-23
ref|XP_006848141.1| hypothetical protein AMTR_s00029p00226370 [A... 112 7e-23
ref|NP_001151866.1| small nuclear ribonucleoprotein F [Zea mays]... 111 9e-23
ref|NP_001150516.1| small nuclear ribonucleoprotein F [Zea mays]... 111 9e-23
ref|XP_004507856.1| PREDICTED: probable small nuclear ribonucleo... 111 1e-22
gb|AFK45150.1| unknown [Lotus japonicus] 111 1e-22
ref|XP_003549441.1| PREDICTED: probable small nuclear ribonucleo... 111 1e-22
ref|XP_003555743.1| PREDICTED: probable small nuclear ribonucleo... 111 1e-22
gb|ACU13643.1| unknown [Glycine max] 111 1e-22
gb|ACG39075.1| small nuclear ribonucleoprotein F [Zea mays] 111 1e-22
gb|ABK22541.1| unknown [Picea sitchensis] 111 1e-22
ref|XP_003610112.1| Small nuclear ribonucleoprotein F [Medicago ... 111 1e-22
ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleo... 110 2e-22
gb|EEC72605.1| hypothetical protein OsI_06076 [Oryza sativa Indi... 110 2e-22
gb|ABA95170.1| small nuclear ribonucleoprotein F, putative, expr... 109 3e-22
ref|XP_001761112.1| predicted protein [Physcomitrella patens] gi... 109 3e-22
>ref|XP_004951718.1| PREDICTED: probable small nuclear ribonucleoprotein F-like [Setaria
italica] gi|514709230|ref|XP_004951733.1| PREDICTED:
probable small nuclear ribonucleoprotein F-like [Setaria
italica]
Length = 86
Score = 113 bits (282), Expect = 3e-23
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = -2
Query: 163 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEFIDG 2
MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEE+IDG
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDG 54
>ref|NP_001068396.1| Os11g0657300 [Oryza sativa Japonica Group]
gi|77552372|gb|ABA95169.1| small nuclear
ribonucleoprotein F, putative, expressed [Oryza sativa
Japonica Group] gi|113645618|dbj|BAF28759.1|
Os11g0657300 [Oryza sativa Japonica Group]
gi|215693012|dbj|BAG88432.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218186140|gb|EEC68567.1| hypothetical protein
OsI_36896 [Oryza sativa Indica Group]
gi|222616369|gb|EEE52501.1| hypothetical protein
OsJ_34703 [Oryza sativa Japonica Group]
Length = 86
Score = 113 bits (282), Expect = 3e-23
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = -2
Query: 163 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEFIDG 2
MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEE+IDG
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDG 54
>ref|NP_001046068.1| Os02g0177500 [Oryza sativa Japonica Group]
gi|573918646|ref|XP_006646960.1| PREDICTED: probable
small nuclear ribonucleoprotein F-like [Oryza
brachyantha] gi|50252055|dbj|BAD27986.1| putative small
nuclear ribonucleoprotein polypeptide F [Oryza sativa
Japonica Group] gi|113535599|dbj|BAF07982.1|
Os02g0177500 [Oryza sativa Japonica Group]
Length = 86
Score = 113 bits (282), Expect = 3e-23
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = -2
Query: 163 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEFIDG 2
MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEE+IDG
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDG 54
>ref|XP_003570509.1| PREDICTED: probable small nuclear ribonucleoprotein F-like
[Brachypodium distachyon]
Length = 86
Score = 113 bits (282), Expect = 3e-23
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = -2
Query: 163 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEFIDG 2
MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEE+IDG
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDG 54
>ref|XP_003563369.1| PREDICTED: probable small nuclear ribonucleoprotein F-like
[Brachypodium distachyon]
Length = 86
Score = 113 bits (282), Expect = 3e-23
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = -2
Query: 163 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEFIDG 2
MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEE+IDG
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDG 54
>ref|XP_006848141.1| hypothetical protein AMTR_s00029p00226370 [Amborella trichopoda]
gi|548851446|gb|ERN09722.1| hypothetical protein
AMTR_s00029p00226370 [Amborella trichopoda]
Length = 86
Score = 112 bits (279), Expect = 7e-23
Identities = 52/54 (96%), Positives = 54/54 (100%)
Frame = -2
Query: 163 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEFIDG 2
MATVPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEE+IDG
Sbjct: 1 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDG 54
>ref|NP_001151866.1| small nuclear ribonucleoprotein F [Zea mays]
gi|195650409|gb|ACG44672.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|413935831|gb|AFW70382.1| small nuclear
ribonucleoprotein F [Zea mays]
Length = 107
Score = 111 bits (278), Expect = 9e-23
Identities = 52/59 (88%), Positives = 55/59 (93%)
Frame = -2
Query: 178 VSSSVMATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEFIDG 2
+SS + TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYL SVDSYMNLQLANTEE+IDG
Sbjct: 17 ISSRFVQTVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLASVDSYMNLQLANTEEYIDG 75
>ref|NP_001150516.1| small nuclear ribonucleoprotein F [Zea mays]
gi|194696080|gb|ACF82124.1| unknown [Zea mays]
gi|195609436|gb|ACG26548.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|195622854|gb|ACG33257.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|195639814|gb|ACG39375.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|413926377|gb|AFW66309.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|413935832|gb|AFW70383.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|413935833|gb|AFW70384.1| small nuclear
ribonucleoprotein F [Zea mays]
Length = 86
Score = 111 bits (278), Expect = 9e-23
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = -2
Query: 163 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEFIDG 2
MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYL SVDSYMNLQLANTEE+IDG
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLASVDSYMNLQLANTEEYIDG 54
>ref|XP_004507856.1| PREDICTED: probable small nuclear ribonucleoprotein F-like [Cicer
arietinum]
Length = 88
Score = 111 bits (277), Expect = 1e-22
Identities = 51/54 (94%), Positives = 54/54 (100%)
Frame = -2
Query: 163 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEFIDG 2
MAT+PVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEE+I+G
Sbjct: 1 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEG 54
>gb|AFK45150.1| unknown [Lotus japonicus]
Length = 88
Score = 111 bits (277), Expect = 1e-22
Identities = 51/54 (94%), Positives = 54/54 (100%)
Frame = -2
Query: 163 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEFIDG 2
MAT+PVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEE+I+G
Sbjct: 1 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEG 54
>ref|XP_003549441.1| PREDICTED: probable small nuclear ribonucleoprotein F [Glycine max]
gi|561028116|gb|ESW26756.1| hypothetical protein
PHAVU_003G145500g [Phaseolus vulgaris]
Length = 88
Score = 111 bits (277), Expect = 1e-22
Identities = 51/54 (94%), Positives = 54/54 (100%)
Frame = -2
Query: 163 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEFIDG 2
MAT+PVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEE+I+G
Sbjct: 1 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEG 54
>ref|XP_003555743.1| PREDICTED: probable small nuclear ribonucleoprotein F [Glycine max]
gi|255628071|gb|ACU14380.1| unknown [Glycine max]
Length = 88
Score = 111 bits (277), Expect = 1e-22
Identities = 51/54 (94%), Positives = 54/54 (100%)
Frame = -2
Query: 163 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEFIDG 2
MAT+PVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEE+I+G
Sbjct: 1 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEG 54
>gb|ACU13643.1| unknown [Glycine max]
Length = 88
Score = 111 bits (277), Expect = 1e-22
Identities = 51/54 (94%), Positives = 54/54 (100%)
Frame = -2
Query: 163 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEFIDG 2
MAT+PVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEE+I+G
Sbjct: 1 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEG 54
>gb|ACG39075.1| small nuclear ribonucleoprotein F [Zea mays]
Length = 86
Score = 111 bits (277), Expect = 1e-22
Identities = 51/54 (94%), Positives = 53/54 (98%)
Frame = -2
Query: 163 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEFIDG 2
MATVPVNPKPFLNNLTGKP+IVKLKWGMEYKGYL SVDSYMNLQLANTEE+IDG
Sbjct: 1 MATVPVNPKPFLNNLTGKPIIVKLKWGMEYKGYLASVDSYMNLQLANTEEYIDG 54
>gb|ABK22541.1| unknown [Picea sitchensis]
Length = 84
Score = 111 bits (277), Expect = 1e-22
Identities = 52/54 (96%), Positives = 54/54 (100%)
Frame = -2
Query: 163 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEFIDG 2
MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEE+IDG
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDG 54
>ref|XP_003610112.1| Small nuclear ribonucleoprotein F [Medicago truncatula]
gi|355511167|gb|AES92309.1| Small nuclear
ribonucleoprotein F [Medicago truncatula]
gi|388505566|gb|AFK40849.1| unknown [Medicago
truncatula]
Length = 88
Score = 111 bits (277), Expect = 1e-22
Identities = 51/54 (94%), Positives = 54/54 (100%)
Frame = -2
Query: 163 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEFIDG 2
MAT+PVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEE+I+G
Sbjct: 1 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEG 54
>ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleoprotein F [Vitis
vinifera] gi|296083390|emb|CBI23345.3| unnamed protein
product [Vitis vinifera]
Length = 88
Score = 110 bits (275), Expect = 2e-22
Identities = 51/54 (94%), Positives = 54/54 (100%)
Frame = -2
Query: 163 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEFIDG 2
MATVP+NPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLAN+EE+IDG
Sbjct: 1 MATVPLNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANSEEYIDG 54
>gb|EEC72605.1| hypothetical protein OsI_06076 [Oryza sativa Indica Group]
gi|222622299|gb|EEE56431.1| hypothetical protein
OsJ_05599 [Oryza sativa Japonica Group]
Length = 146
Score = 110 bits (275), Expect = 2e-22
Identities = 53/62 (85%), Positives = 55/62 (88%)
Frame = -2
Query: 187 SGAVSSSVMATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEFI 8
SG + TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEE+I
Sbjct: 53 SGENKDNDPVTVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYI 112
Query: 7 DG 2
DG
Sbjct: 113 DG 114
>gb|ABA95170.1| small nuclear ribonucleoprotein F, putative, expressed [Oryza
sativa Japonica Group]
Length = 85
Score = 109 bits (273), Expect = 3e-22
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = -2
Query: 157 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEFIDG 2
TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEE+IDG
Sbjct: 2 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDG 53
>ref|XP_001761112.1| predicted protein [Physcomitrella patens]
gi|162687798|gb|EDQ74179.1| predicted protein
[Physcomitrella patens]
Length = 87
Score = 109 bits (273), Expect = 3e-22
Identities = 50/54 (92%), Positives = 54/54 (100%)
Frame = -2
Query: 163 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEFIDG 2
MAT+PVNPKPFLN+LTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEF+DG
Sbjct: 1 MATIPVNPKPFLNDLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEFVDG 54