BLASTX nr result
ID: Zingiber23_contig00013083
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00013083
(257 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB65262.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis] 64 2e-08
dbj|BAJ99059.1| predicted protein [Hordeum vulgare subsp. vulgar... 59 7e-07
gb|ESW35419.1| hypothetical protein PHAVU_001G233700g [Phaseolus... 59 9e-07
ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 59 9e-07
ref|XP_003537459.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 58 1e-06
gb|AAK73147.1|AC079022_20 putative RING-H2 finger protein [Oryza... 57 2e-06
gb|EPS68566.1| hypothetical protein M569_06199, partial [Genlise... 57 2e-06
ref|XP_002439130.1| hypothetical protein SORBIDRAFT_09g001100 [S... 57 2e-06
ref|XP_002531557.1| zinc finger protein, putative [Ricinus commu... 56 4e-06
gb|EPS71485.1| hypothetical protein M569_03274 [Genlisea aurea] 56 6e-06
ref|XP_004503159.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 56 6e-06
gb|AFW88842.1| putative RING zinc finger domain superfamily prot... 56 6e-06
ref|XP_002468111.1| hypothetical protein SORBIDRAFT_01g039760 [S... 56 6e-06
gb|ACG48803.1| protein binding protein [Zea mays] 56 6e-06
ref|NP_001136765.1| uncharacterized LOC100216907 [Zea mays] gi|1... 56 6e-06
gb|EAY89422.1| hypothetical protein OsI_10929 [Oryza sativa Indi... 56 6e-06
ref|NP_001049693.1| Os03g0271600 [Oryza sativa Japonica Group] g... 56 6e-06
ref|XP_004984935.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 55 9e-06
ref|XP_004960533.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 55 9e-06
dbj|BAJ87816.1| predicted protein [Hordeum vulgare subsp. vulgare] 55 9e-06
>gb|EXB65262.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis]
Length = 390
Score = 63.9 bits (154), Expect = 2e-08
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = -3
Query: 135 YWCYQCSRFVRVRQESAIVCSDCHGGFLEEVGTPPPP 25
YWCY+CSRFVRV + A+VC DC GGF+EE+ PP P
Sbjct: 8 YWCYRCSRFVRVWNDDAVVCPDCDGGFVEEIENPPQP 44
>dbj|BAJ99059.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326502908|dbj|BAJ99082.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|326530360|dbj|BAJ97606.1|
predicted protein [Hordeum vulgare subsp. vulgare]
Length = 280
Score = 58.9 bits (141), Expect = 7e-07
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = -3
Query: 135 YWCYQCSRFVRVRQESAIVCSDCHGGFLEEVGTPPPP 25
YWCY CSRFVRV + +VC DC GGFLE+ PPPP
Sbjct: 8 YWCYHCSRFVRV-SPATVVCPDCDGGFLEQFPQPPPP 43
>gb|ESW35419.1| hypothetical protein PHAVU_001G233700g [Phaseolus vulgaris]
Length = 386
Score = 58.5 bits (140), Expect = 9e-07
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = -3
Query: 135 YWCYQCSRFVRVRQESAIVCSDCHGGFLEEVGTPP 31
YWCY+CSRF+RV + A+VC DC GF+EE+ PP
Sbjct: 9 YWCYRCSRFIRVLRHDAVVCPDCDSGFIEEIEHPP 43
>ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
Length = 361
Score = 58.5 bits (140), Expect = 9e-07
Identities = 24/38 (63%), Positives = 26/38 (68%)
Frame = -3
Query: 135 YWCYQCSRFVRVRQESAIVCSDCHGGFLEEVGTPPPPP 22
YWCY C+RFVRV AIVC DC GGFLEE+ P P
Sbjct: 3 YWCYSCNRFVRVWSHDAIVCPDCDGGFLEEIEEQPRRP 40
>ref|XP_003537459.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 393
Score = 58.2 bits (139), Expect = 1e-06
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = -3
Query: 135 YWCYQCSRFVRVRQESAIVCSDCHGGFLEEVGTPP 31
YWCY+CSRFVRV +VC DC GGF+EE+ PP
Sbjct: 10 YWCYRCSRFVRVWPHHTVVCPDCDGGFIEEIEHPP 44
>gb|AAK73147.1|AC079022_20 putative RING-H2 finger protein [Oryza sativa]
Length = 386
Score = 57.4 bits (137), Expect = 2e-06
Identities = 23/39 (58%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Frame = -3
Query: 135 YWCYQCSRFVRV---RQESAIVCSDCHGGFLEEVGTPPP 28
YWCY C RFVR +SA+ C DC GGFLEE+ PPP
Sbjct: 21 YWCYSCDRFVRAPAPHDDSAVACPDCGGGFLEEMSAPPP 59
>gb|EPS68566.1| hypothetical protein M569_06199, partial [Genlisea aurea]
Length = 385
Score = 57.0 bits (136), Expect = 2e-06
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = -3
Query: 135 YWCYQCSRFVRVRQESAIVCSDCHGGFLEEVGTP 34
YWCY+CSRFVRV + ++ C DC GGF+EEV P
Sbjct: 7 YWCYRCSRFVRVWNQDSVACPDCDGGFVEEVDAP 40
>ref|XP_002439130.1| hypothetical protein SORBIDRAFT_09g001100 [Sorghum bicolor]
gi|241944415|gb|EES17560.1| hypothetical protein
SORBIDRAFT_09g001100 [Sorghum bicolor]
Length = 413
Score = 57.0 bits (136), Expect = 2e-06
Identities = 24/38 (63%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -3
Query: 135 YWCYQCSRFVRVRQESAI-VCSDCHGGFLEEVGTPPPP 25
YWCYQC RFVR A C C GGFLEE+G PPPP
Sbjct: 20 YWCYQCDRFVRATAAPASPACPSCGGGFLEEMGAPPPP 57
>ref|XP_002531557.1| zinc finger protein, putative [Ricinus communis]
gi|223528818|gb|EEF30823.1| zinc finger protein,
putative [Ricinus communis]
Length = 356
Score = 56.2 bits (134), Expect = 4e-06
Identities = 23/41 (56%), Positives = 30/41 (73%), Gaps = 3/41 (7%)
Frame = -3
Query: 135 YWCYQCSRFVRVRQES---AIVCSDCHGGFLEEVGTPPPPP 22
+WCY+C+RF+RVR S +I C DC GGF+EE+GTP P
Sbjct: 10 FWCYRCNRFIRVRVPSIQDSISCPDCGGGFIEEIGTPSHSP 50
>gb|EPS71485.1| hypothetical protein M569_03274 [Genlisea aurea]
Length = 420
Score = 55.8 bits (133), Expect = 6e-06
Identities = 21/33 (63%), Positives = 26/33 (78%)
Frame = -3
Query: 135 YWCYQCSRFVRVRQESAIVCSDCHGGFLEEVGT 37
YWCY+CSRFVRV + +I C DC GGF+EE+ T
Sbjct: 5 YWCYRCSRFVRVWTQDSIACPDCDGGFVEEIDT 37
>ref|XP_004503159.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cicer arietinum]
Length = 380
Score = 55.8 bits (133), Expect = 6e-06
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = -3
Query: 135 YWCYQCSRFVRVRQESAIVCSDCHGGFLEEVGTP 34
YWCY+CSRFVRV ++ + C DC GGF+EE+ P
Sbjct: 9 YWCYRCSRFVRVGRQETVTCPDCDGGFVEEIEHP 42
>gb|AFW88842.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 278
Score = 55.8 bits (133), Expect = 6e-06
Identities = 23/36 (63%), Positives = 26/36 (72%)
Frame = -3
Query: 135 YWCYQCSRFVRVRQESAIVCSDCHGGFLEEVGTPPP 28
YWCY CSRFVRV S +VC +C GGFLE+ PPP
Sbjct: 8 YWCYSCSRFVRV-SPSTVVCPECDGGFLEQFTQPPP 42
>ref|XP_002468111.1| hypothetical protein SORBIDRAFT_01g039760 [Sorghum bicolor]
gi|241921965|gb|EER95109.1| hypothetical protein
SORBIDRAFT_01g039760 [Sorghum bicolor]
Length = 275
Score = 55.8 bits (133), Expect = 6e-06
Identities = 23/36 (63%), Positives = 26/36 (72%)
Frame = -3
Query: 135 YWCYQCSRFVRVRQESAIVCSDCHGGFLEEVGTPPP 28
YWCY CSRFVRV S +VC +C GGFLE+ PPP
Sbjct: 8 YWCYSCSRFVRV-SPSTVVCPECDGGFLEQFTQPPP 42
>gb|ACG48803.1| protein binding protein [Zea mays]
Length = 278
Score = 55.8 bits (133), Expect = 6e-06
Identities = 23/36 (63%), Positives = 26/36 (72%)
Frame = -3
Query: 135 YWCYQCSRFVRVRQESAIVCSDCHGGFLEEVGTPPP 28
YWCY CSRFVRV S +VC +C GGFLE+ PPP
Sbjct: 8 YWCYSCSRFVRV-SPSTVVCPECDGGFLEQFTQPPP 42
>ref|NP_001136765.1| uncharacterized LOC100216907 [Zea mays] gi|194696968|gb|ACF82568.1|
unknown [Zea mays] gi|414866063|tpg|DAA44620.1| TPA:
putative RING zinc finger domain superfamily protein
[Zea mays]
Length = 278
Score = 55.8 bits (133), Expect = 6e-06
Identities = 23/36 (63%), Positives = 26/36 (72%)
Frame = -3
Query: 135 YWCYQCSRFVRVRQESAIVCSDCHGGFLEEVGTPPP 28
YWCY CSRFVRV S +VC +C GGFLE+ PPP
Sbjct: 8 YWCYSCSRFVRV-SPSTVVCPECDGGFLEQFTQPPP 42
>gb|EAY89422.1| hypothetical protein OsI_10929 [Oryza sativa Indica Group]
Length = 279
Score = 55.8 bits (133), Expect = 6e-06
Identities = 23/36 (63%), Positives = 26/36 (72%)
Frame = -3
Query: 135 YWCYQCSRFVRVRQESAIVCSDCHGGFLEEVGTPPP 28
YWCY CSRFVRV S +VC +C GGFLE+ PPP
Sbjct: 8 YWCYHCSRFVRV-SPSTVVCPECDGGFLEQFPQPPP 42
>ref|NP_001049693.1| Os03g0271600 [Oryza sativa Japonica Group]
gi|29893617|gb|AAP06871.1| unknown protein [Oryza sativa
Japonica Group] gi|108707422|gb|ABF95217.1| Zinc finger,
C3HC4 type family protein, expressed [Oryza sativa
Japonica Group] gi|113548164|dbj|BAF11607.1|
Os03g0271600 [Oryza sativa Japonica Group]
gi|215695129|dbj|BAG90320.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 279
Score = 55.8 bits (133), Expect = 6e-06
Identities = 23/36 (63%), Positives = 26/36 (72%)
Frame = -3
Query: 135 YWCYQCSRFVRVRQESAIVCSDCHGGFLEEVGTPPP 28
YWCY CSRFVRV S +VC +C GGFLE+ PPP
Sbjct: 8 YWCYHCSRFVRV-SPSTVVCPECDGGFLEQFPQPPP 42
>ref|XP_004984935.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Setaria italica]
Length = 277
Score = 55.1 bits (131), Expect = 9e-06
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = -3
Query: 135 YWCYQCSRFVRVRQESAIVCSDCHGGFLEEVGTPPP 28
YWCY+CSRFVRV + +VC +C GGFLE+ PPP
Sbjct: 8 YWCYRCSRFVRV-SPATVVCPECDGGFLEQFPQPPP 42
>ref|XP_004960533.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Setaria italica]
Length = 410
Score = 55.1 bits (131), Expect = 9e-06
Identities = 24/48 (50%), Positives = 27/48 (56%), Gaps = 12/48 (25%)
Frame = -3
Query: 135 YWCYQCSRFVRVRQE------------SAIVCSDCHGGFLEEVGTPPP 28
YWCYQC RFVR E +A+ C C GGFLEE+G PPP
Sbjct: 13 YWCYQCDRFVRATAEGGDGSSPPAAAAAAVACPSCGGGFLEEMGAPPP 60
>dbj|BAJ87816.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 55.1 bits (131), Expect = 9e-06
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = -3
Query: 135 YWCYQCSRFVRVRQESAIVCSDCHGGFLEEVGTPPP 28
YWCY C RFVR ++ + C C GGFLE++ PPP
Sbjct: 20 YWCYSCERFVRTEGDAGLACPGCDGGFLEQMDAPPP 55