BLASTX nr result
ID: Zingiber23_contig00012366
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00012366
(320 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004150622.1| PREDICTED: phosphomethylpyrimidine synthase,... 89 5e-16
gb|EMJ08404.1| hypothetical protein PRUPE_ppa002651mg [Prunus pe... 89 6e-16
ref|XP_004500235.1| PREDICTED: phosphomethylpyrimidine synthase,... 84 1e-14
gb|ESW18728.1| hypothetical protein PHAVU_006G065300g [Phaseolus... 84 2e-14
ref|XP_006602098.1| PREDICTED: phosphomethylpyrimidine synthase,... 82 7e-14
ref|XP_003551304.1| PREDICTED: phosphomethylpyrimidine synthase,... 82 7e-14
gb|EXC01484.1| Phosphomethylpyrimidine synthase [Morus notabilis] 82 9e-14
ref|XP_003538282.1| PREDICTED: phosphomethylpyrimidine synthase,... 82 9e-14
gb|EOY33784.1| ThiaminC isoform 4 [Theobroma cacao] 81 2e-13
gb|EOY33781.1| ThiaminC isoform 1 [Theobroma cacao] gi|508786526... 81 2e-13
ref|XP_006379040.1| hypothetical protein POPTR_0009s04780g [Popu... 80 3e-13
ref|XP_004294241.1| PREDICTED: phosphomethylpyrimidine synthase,... 79 5e-13
ref|XP_006344042.1| PREDICTED: phosphomethylpyrimidine synthase,... 79 8e-13
gb|ABK96438.1| unknown [Populus trichocarpa x Populus deltoides] 79 8e-13
ref|NP_180524.1| phosphomethylpyrimidine synthase [Arabidopsis t... 78 1e-12
ref|XP_006650406.1| PREDICTED: phosphomethylpyrimidine synthase,... 78 1e-12
ref|XP_002879223.1| thiamine biosynthesis family protein [Arabid... 78 1e-12
ref|XP_002525602.1| catalytic, putative [Ricinus communis] gi|22... 78 1e-12
ref|XP_006410019.1| hypothetical protein EUTSA_v10016370mg [Eutr... 77 2e-12
ref|XP_006488487.1| PREDICTED: ATP-dependent zinc metalloproteas... 77 2e-12
>ref|XP_004150622.1| PREDICTED: phosphomethylpyrimidine synthase, chloroplastic-like
[Cucumis sativus] gi|449515103|ref|XP_004164589.1|
PREDICTED: phosphomethylpyrimidine synthase,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 89.4 bits (220), Expect = 5e-16
Identities = 51/106 (48%), Positives = 66/106 (62%), Gaps = 9/106 (8%)
Frame = +2
Query: 29 ITAQLSPASVA--SGRSSHVAFRLSRPALPLGFD-------ACRSLNKDLCYNFVVRPKA 181
+ A ++PA+ SG S L+ LP GFD AC+ L+ + + P+A
Sbjct: 4 VHATITPAAAVGKSGNRSSPTKSLNTAFLP-GFDVVGRVASACKDLHPS---SITLAPRA 59
Query: 182 TLTFDHSVTESTKAKQKKHTVDPAAPDFLPLPSFEQCFPKSTKEFT 319
TLTFD T + KAK +KHT+DP++PDFLPLPSFEQCFPKSTKE T
Sbjct: 60 TLTFDPPETSTEKAKDRKHTIDPSSPDFLPLPSFEQCFPKSTKEHT 105
>gb|EMJ08404.1| hypothetical protein PRUPE_ppa002651mg [Prunus persica]
gi|462402848|gb|EMJ08405.1| hypothetical protein
PRUPE_ppa002651mg [Prunus persica]
Length = 648
Score = 89.0 bits (219), Expect = 6e-16
Identities = 51/101 (50%), Positives = 64/101 (63%), Gaps = 5/101 (4%)
Frame = +2
Query: 26 MITAQLSPASVASGRSSHVAFRLSRPALPLGFDACRSLN----KDLCYNFVVR-PKATLT 190
++ + L+ +G S A S LP GFDA ++ K++C N + P+ATLT
Sbjct: 3 LVHSALTSVVCKNGNHSSAAKFPSTTFLP-GFDAVGRISSPYKKEICLNALSSDPRATLT 61
Query: 191 FDHSVTESTKAKQKKHTVDPAAPDFLPLPSFEQCFPKSTKE 313
FD T S KAK +HTVDPA+PDFLPLPSFEQCFPKSTKE
Sbjct: 62 FDPPATNSEKAKPPRHTVDPASPDFLPLPSFEQCFPKSTKE 102
>ref|XP_004500235.1| PREDICTED: phosphomethylpyrimidine synthase, chloroplastic-like
[Cicer arietinum]
Length = 1225
Score = 84.3 bits (207), Expect = 1e-14
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = +2
Query: 173 PKATLTFDHSVTESTKAKQKKHTVDPAAPDFLPLPSFEQCFPKSTKEF 316
P+ATLTFD + K+KQKKHTVDPA+PDFLPLPSFEQCFPKSTKE+
Sbjct: 631 PRATLTFDPPTANADKSKQKKHTVDPASPDFLPLPSFEQCFPKSTKEY 678
>gb|ESW18728.1| hypothetical protein PHAVU_006G065300g [Phaseolus vulgaris]
gi|561019958|gb|ESW18729.1| hypothetical protein
PHAVU_006G065300g [Phaseolus vulgaris]
Length = 650
Score = 84.0 bits (206), Expect = 2e-14
Identities = 38/47 (80%), Positives = 41/47 (87%)
Frame = +2
Query: 173 PKATLTFDHSVTESTKAKQKKHTVDPAAPDFLPLPSFEQCFPKSTKE 313
P+ATLTFD + S K KQKKHTVDPA+PDFLPLPSFEQCFPKSTKE
Sbjct: 56 PRATLTFDPPTSNSGKTKQKKHTVDPASPDFLPLPSFEQCFPKSTKE 102
>ref|XP_006602098.1| PREDICTED: phosphomethylpyrimidine synthase, chloroplastic-like
isoform X2 [Glycine max]
Length = 646
Score = 82.0 bits (201), Expect = 7e-14
Identities = 49/98 (50%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Frame = +2
Query: 35 AQLSPASVASGRSSHVAFRLSRPALPLGFD----ACRSLNKDLCYNFV-VRPKATLTFDH 199
A ++ SG + + S LP GFD A + K+L + + + P+ATLTFD
Sbjct: 6 ANVTSVVCKSGNHASQSKFTSSSFLP-GFDVVGRASNAWKKELVPSSISLVPRATLTFDP 64
Query: 200 SVTESTKAKQKKHTVDPAAPDFLPLPSFEQCFPKSTKE 313
T S K KQ+KHTVDPA+PDFL LPSFEQCFPKSTKE
Sbjct: 65 PTTNSDKTKQRKHTVDPASPDFLALPSFEQCFPKSTKE 102
>ref|XP_003551304.1| PREDICTED: phosphomethylpyrimidine synthase, chloroplastic-like
isoform X1 [Glycine max]
Length = 647
Score = 82.0 bits (201), Expect = 7e-14
Identities = 49/98 (50%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Frame = +2
Query: 35 AQLSPASVASGRSSHVAFRLSRPALPLGFD----ACRSLNKDLCYNFV-VRPKATLTFDH 199
A ++ SG + + S LP GFD A + K+L + + + P+ATLTFD
Sbjct: 6 ANVTSVVCKSGNHASQSKFTSSSFLP-GFDVVGRASNAWKKELVPSSISLVPRATLTFDP 64
Query: 200 SVTESTKAKQKKHTVDPAAPDFLPLPSFEQCFPKSTKE 313
T S K KQ+KHTVDPA+PDFL LPSFEQCFPKSTKE
Sbjct: 65 PTTNSDKTKQRKHTVDPASPDFLALPSFEQCFPKSTKE 102
>gb|EXC01484.1| Phosphomethylpyrimidine synthase [Morus notabilis]
Length = 647
Score = 81.6 bits (200), Expect = 9e-14
Identities = 48/100 (48%), Positives = 61/100 (61%), Gaps = 5/100 (5%)
Frame = +2
Query: 29 ITAQLSPASVASGRSSHVAFRLSRPALPLGFDACRSLN----KDLCYNFVVR-PKATLTF 193
+ + L+PA +G S S LP GFD ++ K+ C + P+ATLTF
Sbjct: 4 VHSTLTPAVFKNGNHSSPPKFPSTAFLP-GFDFVGRVSSPYKKETCTTPMSSGPRATLTF 62
Query: 194 DHSVTESTKAKQKKHTVDPAAPDFLPLPSFEQCFPKSTKE 313
D T + KQ+KHTVDPA+PDFLPLPSFEQCFP+STKE
Sbjct: 63 DPPTTNAENVKQRKHTVDPASPDFLPLPSFEQCFPRSTKE 102
>ref|XP_003538282.1| PREDICTED: phosphomethylpyrimidine synthase, chloroplastic-like
isoform X1 [Glycine max]
gi|571489428|ref|XP_006591209.1| PREDICTED:
phosphomethylpyrimidine synthase, chloroplastic-like
isoform X2 [Glycine max]
Length = 648
Score = 81.6 bits (200), Expect = 9e-14
Identities = 37/47 (78%), Positives = 40/47 (85%)
Frame = +2
Query: 173 PKATLTFDHSVTESTKAKQKKHTVDPAAPDFLPLPSFEQCFPKSTKE 313
P+ATLTFD T S KQKKHT+DPA+PDFLPLPSFEQCFPKSTKE
Sbjct: 56 PRATLTFDPPTTNSDITKQKKHTLDPASPDFLPLPSFEQCFPKSTKE 102
>gb|EOY33784.1| ThiaminC isoform 4 [Theobroma cacao]
Length = 650
Score = 80.9 bits (198), Expect = 2e-13
Identities = 33/47 (70%), Positives = 43/47 (91%)
Frame = +2
Query: 173 PKATLTFDHSVTESTKAKQKKHTVDPAAPDFLPLPSFEQCFPKSTKE 313
P+ATLTFD + T S ++KQ+KHT+DPA+PDF+PLPSFE+CFPKS+KE
Sbjct: 56 PRATLTFDPTTTNSERSKQRKHTIDPASPDFMPLPSFEECFPKSSKE 102
>gb|EOY33781.1| ThiaminC isoform 1 [Theobroma cacao] gi|508786526|gb|EOY33782.1|
ThiaminC isoform 1 [Theobroma cacao]
gi|508786527|gb|EOY33783.1| ThiaminC isoform 1
[Theobroma cacao] gi|508786529|gb|EOY33785.1| ThiaminC
isoform 1 [Theobroma cacao] gi|508786530|gb|EOY33786.1|
ThiaminC isoform 1 [Theobroma cacao]
Length = 648
Score = 80.9 bits (198), Expect = 2e-13
Identities = 33/47 (70%), Positives = 43/47 (91%)
Frame = +2
Query: 173 PKATLTFDHSVTESTKAKQKKHTVDPAAPDFLPLPSFEQCFPKSTKE 313
P+ATLTFD + T S ++KQ+KHT+DPA+PDF+PLPSFE+CFPKS+KE
Sbjct: 56 PRATLTFDPTTTNSERSKQRKHTIDPASPDFMPLPSFEECFPKSSKE 102
>ref|XP_006379040.1| hypothetical protein POPTR_0009s04780g [Populus trichocarpa]
gi|566186316|ref|XP_006379041.1| hypothetical protein
POPTR_0009s04780g [Populus trichocarpa]
gi|566186318|ref|XP_002314121.2| hypothetical protein
POPTR_0009s04780g [Populus trichocarpa]
gi|550331038|gb|ERP56837.1| hypothetical protein
POPTR_0009s04780g [Populus trichocarpa]
gi|550331039|gb|ERP56838.1| hypothetical protein
POPTR_0009s04780g [Populus trichocarpa]
gi|550331040|gb|EEE88076.2| hypothetical protein
POPTR_0009s04780g [Populus trichocarpa]
Length = 637
Score = 80.1 bits (196), Expect = 3e-13
Identities = 42/72 (58%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
Frame = +2
Query: 107 LPLGFDACRSL-NKDLC-YNFVVRPKATLTFDHSVTESTKAKQKKHTVDPAAPDFLPLPS 280
LPLGF R+ K+ C ++ +ATLTFD T+ QKKHTVDP++PDFLPLPS
Sbjct: 25 LPLGFVISRAACKKEFCAHSMASGARATLTFD----PPTRTNQKKHTVDPSSPDFLPLPS 80
Query: 281 FEQCFPKSTKEF 316
FEQCFPKSTKE+
Sbjct: 81 FEQCFPKSTKEY 92
>ref|XP_004294241.1| PREDICTED: phosphomethylpyrimidine synthase, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 651
Score = 79.3 bits (194), Expect = 5e-13
Identities = 43/74 (58%), Positives = 52/74 (70%), Gaps = 8/74 (10%)
Frame = +2
Query: 116 GFDACRSLN----KDLCYNFVVR-PKATLTFDHSVTESTKAKQK---KHTVDPAAPDFLP 271
GFDA L+ K++C + + PKATLTFD T S KAK +HT+DPA+PDFLP
Sbjct: 32 GFDAVGRLSSPFKKEICLSSISSGPKATLTFDPPATNSEKAKLPNLPRHTLDPASPDFLP 91
Query: 272 LPSFEQCFPKSTKE 313
LPSFE+CFPKSTKE
Sbjct: 92 LPSFEECFPKSTKE 105
>ref|XP_006344042.1| PREDICTED: phosphomethylpyrimidine synthase, chloroplastic-like
isoform X1 [Solanum tuberosum]
gi|565354279|ref|XP_006344043.1| PREDICTED:
phosphomethylpyrimidine synthase, chloroplastic-like
isoform X2 [Solanum tuberosum]
Length = 651
Score = 78.6 bits (192), Expect = 8e-13
Identities = 42/103 (40%), Positives = 63/103 (61%), Gaps = 5/103 (4%)
Frame = +2
Query: 26 MITAQLSPASVASGR-SSHVAFRLSRPALPLGFDACRSL----NKDLCYNFVVRPKATLT 190
M + Q + S+ S + ++H + R + GFD + ++ +N P+ATLT
Sbjct: 1 MASVQTALTSLLSKKGNNHPQVNVPRSSFLPGFDLTGQVAVTRRRETRFNSFSSPRATLT 60
Query: 191 FDHSVTESTKAKQKKHTVDPAAPDFLPLPSFEQCFPKSTKEFT 319
FD T++ + + KHTVDP APDFLPLP+FEQCFPKS+KE++
Sbjct: 61 FDPPSTDNKEKTKPKHTVDPNAPDFLPLPAFEQCFPKSSKEYS 103
>gb|ABK96438.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 637
Score = 78.6 bits (192), Expect = 8e-13
Identities = 41/72 (56%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
Frame = +2
Query: 107 LPLGFD-ACRSLNKDLC-YNFVVRPKATLTFDHSVTESTKAKQKKHTVDPAAPDFLPLPS 280
LPLGF + + K+ C ++ +ATLTFD T+ QKKHTVDP++PDFLPLPS
Sbjct: 25 LPLGFVISSAACKKEFCAHSMASGARATLTFD----PPTRTNQKKHTVDPSSPDFLPLPS 80
Query: 281 FEQCFPKSTKEF 316
FEQCFPKSTKE+
Sbjct: 81 FEQCFPKSTKEY 92
>ref|NP_180524.1| phosphomethylpyrimidine synthase [Arabidopsis thaliana]
gi|30684307|ref|NP_850135.1| phosphomethylpyrimidine
synthase [Arabidopsis thaliana]
gi|334184567|ref|NP_001189634.1| phosphomethylpyrimidine
synthase [Arabidopsis thaliana]
gi|75220243|sp|O82392.1|THIC_ARATH RecName:
Full=Phosphomethylpyrimidine synthase, chloroplastic;
AltName: Full=Hydroxymethylpyrimidine phosphate
synthase; Short=HMP-P synthase; Short=HMP-phosphate
synthase; Short=HMPP synthase; AltName: Full=Protein
PYRIMIDINE REQUIRING; AltName: Full=Thiamine
biosynthesis protein ThiC; Short=Protein THIAMINE C;
Flags: Precursor gi|3582335|gb|AAC35232.1| putative
thiamin biosynthesis protein [Arabidopsis thaliana]
gi|20260180|gb|AAM12988.1| putative thiamin biosynthesis
protein [Arabidopsis thaliana]
gi|22136156|gb|AAM91156.1| putative thiamin biosynthesis
protein [Arabidopsis thaliana]
gi|330253187|gb|AEC08281.1| phosphomethylpyrimidine
synthase [Arabidopsis thaliana]
gi|330253188|gb|AEC08282.1| phosphomethylpyrimidine
synthase [Arabidopsis thaliana]
gi|330253189|gb|AEC08283.1| phosphomethylpyrimidine
synthase [Arabidopsis thaliana]
Length = 644
Score = 78.2 bits (191), Expect = 1e-12
Identities = 41/88 (46%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Frame = +2
Query: 53 SVASGRSSHVAF-RLSRPALPLGFDACRSLNKDLCYNFVVRPKATLTFDHSVTESTKAKQ 229
SV +H A +L +L GFD +ATLTFD T S +AKQ
Sbjct: 11 SVVCNNKNHSARPKLPNSSLLPGFDVVVQAAATRFKKETTTTRATLTFDPPTTNSERAKQ 70
Query: 230 KKHTVDPAAPDFLPLPSFEQCFPKSTKE 313
+KHT+DP++PDF P+PSFE+CFPKSTKE
Sbjct: 71 RKHTIDPSSPDFQPIPSFEECFPKSTKE 98
>ref|XP_006650406.1| PREDICTED: phosphomethylpyrimidine synthase, chloroplastic-like
isoform X1 [Oryza brachyantha]
Length = 652
Score = 77.8 bits (190), Expect = 1e-12
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = +2
Query: 170 RPKATLTFDHSVTESTKAKQKKHTVDPAAPDFLPLPSFEQCFPKSTKE 313
RPKA DHS E K +Q KHTVDPAAP+FLPLPSFE+CFP+STKE
Sbjct: 61 RPKAASVTDHSTAEPAKPRQSKHTVDPAAPEFLPLPSFEECFPRSTKE 108
>ref|XP_002879223.1| thiamine biosynthesis family protein [Arabidopsis lyrata subsp.
lyrata] gi|297325062|gb|EFH55482.1| thiamine
biosynthesis family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 645
Score = 77.8 bits (190), Expect = 1e-12
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Frame = +2
Query: 53 SVASGRSSHVAF-RLSRPALPLGFDACRSLNKDLCYNF---VVRPKATLTFDHSVTESTK 220
SV SH A+ +L +L GFD + + F +ATLTFD T S +
Sbjct: 11 SVVCNNKSHSAWPKLPNSSLLPGFDLV--VQAAVATRFKKETTTTRATLTFDPPTTNSER 68
Query: 221 AKQKKHTVDPAAPDFLPLPSFEQCFPKSTKE 313
AKQ+KHT+DP++PDF P+PSFE+CFPKSTKE
Sbjct: 69 AKQRKHTIDPSSPDFQPIPSFEECFPKSTKE 99
>ref|XP_002525602.1| catalytic, putative [Ricinus communis] gi|223535038|gb|EEF36720.1|
catalytic, putative [Ricinus communis]
Length = 643
Score = 77.8 bits (190), Expect = 1e-12
Identities = 37/52 (71%), Positives = 42/52 (80%), Gaps = 3/52 (5%)
Frame = +2
Query: 173 PKATLTFDHSVTESTKAKQKK---HTVDPAAPDFLPLPSFEQCFPKSTKEFT 319
P+ATLTFD S K KQKK HT+DP++PDFLPLPSFEQCFPKSTKEF+
Sbjct: 48 PRATLTFDPPTDNSYKIKQKKQTPHTLDPSSPDFLPLPSFEQCFPKSTKEFS 99
>ref|XP_006410019.1| hypothetical protein EUTSA_v10016370mg [Eutrema salsugineum]
gi|567210201|ref|XP_006410020.1| hypothetical protein
EUTSA_v10016370mg [Eutrema salsugineum]
gi|312282721|dbj|BAJ34226.1| unnamed protein product
[Thellungiella halophila] gi|557111188|gb|ESQ51472.1|
hypothetical protein EUTSA_v10016370mg [Eutrema
salsugineum] gi|557111189|gb|ESQ51473.1| hypothetical
protein EUTSA_v10016370mg [Eutrema salsugineum]
Length = 644
Score = 77.4 bits (189), Expect = 2e-12
Identities = 44/95 (46%), Positives = 57/95 (60%), Gaps = 8/95 (8%)
Frame = +2
Query: 53 SVASGRSSHVAF-RLSRPALPLGFD-------ACRSLNKDLCYNFVVRPKATLTFDHSVT 208
SV +H A+ +L +L GFD A RS + +ATLTFD T
Sbjct: 10 SVVCNNKNHSAWPKLPNSSLLPGFDVSVVQAAAVRSKKE------TTSTRATLTFDPPTT 63
Query: 209 ESTKAKQKKHTVDPAAPDFLPLPSFEQCFPKSTKE 313
S +AKQ+KHT+DP++PDF P+PSFE+CFPKSTKE
Sbjct: 64 NSERAKQRKHTIDPSSPDFQPIPSFEECFPKSTKE 98
>ref|XP_006488487.1| PREDICTED: ATP-dependent zinc metalloprotease FTSH 7,
chloroplastic-like isoform X4 [Citrus sinensis]
Length = 1224
Score = 77.0 bits (188), Expect = 2e-12
Identities = 38/69 (55%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Frame = +2
Query: 116 GFD--ACRSLNKDLCYNFVVRPKATLTFDHSVTESTKAKQKKHTVDPAAPDFLPLPSFEQ 289
GFD AC+ K++C + +A LTFD S Q+KHT DPA+PDFLPLPSFEQ
Sbjct: 610 GFDVVACK---KEICSSMSSGIRAALTFDPPTANSKNTGQRKHTADPASPDFLPLPSFEQ 666
Query: 290 CFPKSTKEF 316
CFPKS+KE+
Sbjct: 667 CFPKSSKEY 675