BLASTX nr result
ID: Zingiber23_contig00012330
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00012330
(1046 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAK07429.1| predicted protein [Hordeum vulgare subsp. vulgare] 280 5e-73
ref|XP_003570718.1| PREDICTED: replication protein A 32 kDa subu... 261 2e-67
gb|EMT08397.1| Replication protein A 32 kDa subunit [Aegilops ta... 261 3e-67
ref|XP_004954499.1| PREDICTED: replication protein A 32 kDa subu... 256 1e-65
ref|XP_006648165.1| PREDICTED: replication protein A 32 kDa subu... 251 3e-64
ref|XP_002454830.1| hypothetical protein SORBIDRAFT_04g038190 [S... 248 4e-63
ref|NP_001048604.1| Os02g0829100 [Oryza sativa Japonica Group] g... 246 8e-63
gb|EEE58102.1| hypothetical protein OsJ_08977 [Oryza sativa Japo... 246 8e-63
gb|EEC74294.1| hypothetical protein OsI_09546 [Oryza sativa Indi... 246 8e-63
dbj|BAB40535.1| replication protein A 30kDa [Oryza sativa Japoni... 246 1e-62
ref|XP_004977372.1| PREDICTED: replication protein A 32 kDa subu... 245 2e-62
gb|EMS68679.1| Replication protein A 32 kDa subunit [Triticum ur... 238 3e-60
gb|ACG31701.1| replication protein A 32 kDa subunit [Zea mays] 225 2e-56
gb|ACF80654.1| unknown [Zea mays] gi|413939586|gb|AFW74137.1| re... 225 2e-56
ref|XP_006843762.1| hypothetical protein AMTR_s00007p00238780 [A... 223 1e-55
gb|ADE75749.1| unknown [Picea sitchensis] 220 8e-55
ref|XP_002268721.2| PREDICTED: replication protein A 32 kDa subu... 215 3e-53
emb|CBI17841.3| unnamed protein product [Vitis vinifera] 214 3e-53
ref|XP_006361577.1| PREDICTED: replication protein A 32 kDa subu... 210 7e-52
ref|NP_001047510.1| Os02g0633400 [Oryza sativa Japonica Group] g... 210 7e-52
>dbj|BAK07429.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 277
Score = 280 bits (717), Expect = 5e-73
Identities = 149/276 (53%), Positives = 188/276 (68%), Gaps = 7/276 (2%)
Frame = +3
Query: 42 MFSSQIEGGGFGLSQSSQNP--DSGFSKNRGATGLLPLTVKQIXXXXXXXXXXXX--IKV 209
MFSSQ++ +SQN DS +K RGA+G +PLTVKQI V
Sbjct: 2 MFSSQVDAFSPSQFTASQNAAADSTPNKFRGASGTMPLTVKQIADAQLAGTGEKGGPFVV 61
Query: 210 DGADATNIRLLGLVMNKAERATDVHFTLDDGTGRIDVIRWVNDASDANETAVIQNGTYVS 389
DG + N+RL+G+V K ER TDV FTLDDGTGRID IRWVNDA+D+ ETA IQNG YV+
Sbjct: 62 DGVETANVRLVGMVSGKVERNTDVSFTLDDGTGRIDFIRWVNDAADSAETAAIQNGMYVA 121
Query: 390 VSGSLKGFQDKKRAVAFSVSPVTDYNAVALHFIQCIHVHLWNAKQKGNDVFHNTTS--NQ 563
V GSLKG QDKKRA AF+V P+TDYN V LHFIQC+ +H N K K H +S
Sbjct: 122 VIGSLKGVQDKKRATAFAVRPITDYNEVTLHFIQCVRMHAENTKSKVGSPTHTNSSMGTP 181
Query: 564 ISSQTVQKEYQPSVSSQPFVSA-GIGGSKTDTYKLVLDIFQEPSSLASDHGLHIDEVARR 740
S++ + PSV S P +A G GS+TD Y VL++F+EP+++ SDHG+H+D++A+R
Sbjct: 182 FSNRLNEAATPPSVKSNPAPAASGTNGSETDFYTQVLNVFREPANMESDHGVHMDDIAKR 241
Query: 741 LGLPMNKIKEAIDYYVDIGHIYSTIDDYHFKSACID 848
LP KIKEAIDY+VD+GHIYSTIDD+H+KSA +D
Sbjct: 242 FRLPALKIKEAIDYHVDVGHIYSTIDDFHYKSAFVD 277
>ref|XP_003570718.1| PREDICTED: replication protein A 32 kDa subunit-like [Brachypodium
distachyon]
Length = 278
Score = 261 bits (668), Expect = 2e-67
Identities = 149/281 (53%), Positives = 179/281 (63%), Gaps = 12/281 (4%)
Frame = +3
Query: 42 MFSSQIEGGGFGLSQSSQNPDSGF---SKNRGATGLLPLTVKQIXXXXXXXXXXXXIK-- 206
MFSSQ++ SSQN + SK RGA+ PLTVKQI
Sbjct: 2 MFSSQLDAFSPSQFTSSQNAAADSTTPSKFRGASSTTPLTVKQIADAQLSGSGDKGAPFV 61
Query: 207 VDGADATNIRLLGLVMNKAERATDVHFTLDDGTGRIDVIRWVNDASDANETAVIQNGTYV 386
VDG + NIRL+G+V KAERATDV FTLDDGTGR+D IRWVNDA+D+ ETA IQNG YV
Sbjct: 62 VDGVEIANIRLVGMVNGKAERATDVSFTLDDGTGRLDFIRWVNDATDSAETAAIQNGMYV 121
Query: 387 SVSGSLKGFQDKKRAVAFSVSPVTDYNAVALHFIQCIHVHLWNAKQ------KGNDVFHN 548
+V G+LKG QDKK A AFSV P+TDYN V LHFIQC+ +H+ N K K N
Sbjct: 122 AVIGTLKGLQDKKHATAFSVRPITDYNEVTLHFIQCVRIHIENTKSKVGSPAKTNSAIGT 181
Query: 549 TTSNQISSQTVQKEYQPSVSSQPFVSAGIGGSKT-DTYKLVLDIFQEPSSLASDHGLHID 725
+ SN +S T S+ SQ V++G GS T D + VL I EP++ S+HG+HID
Sbjct: 182 SLSNSLSEATT----PTSLKSQAPVTSGTDGSGTDDLHTQVLKILCEPANAESEHGVHID 237
Query: 726 EVARRLGLPMNKIKEAIDYYVDIGHIYSTIDDYHFKSACID 848
E+ +R LP KIKEAI Y VDIGHIYSTIDD+HFKSA +D
Sbjct: 238 EITKRFKLPAEKIKEAIYYNVDIGHIYSTIDDFHFKSALVD 278
>gb|EMT08397.1| Replication protein A 32 kDa subunit [Aegilops tauschii]
Length = 296
Score = 261 bits (667), Expect = 3e-67
Identities = 135/250 (54%), Positives = 173/250 (69%), Gaps = 5/250 (2%)
Frame = +3
Query: 114 SKNRGATGLLPLTVKQIXXXXXXXXXXXXIK--VDGADATNIRLLGLVMNKAERATDVHF 287
S+ RGA+G +PLTVKQI VDG + N+RL+G+V KAER TDV F
Sbjct: 56 SQFRGASGTMPLTVKQIADAQLAGTGEKGAPFVVDGVETANVRLVGMVSGKAERNTDVSF 115
Query: 288 TLDDGTGRIDVIRWVNDASDANETAVIQNGTYVSVSGSLKGFQDKKRAVAFSVSPVTDYN 467
TLDDGTGRID IRWVNDA+D+ ETA IQNG YV+V GSLKG QDKKRA AF+V P+TDYN
Sbjct: 116 TLDDGTGRIDFIRWVNDAADSAETAAIQNGMYVAVIGSLKGVQDKKRATAFAVRPITDYN 175
Query: 468 AVALHFIQCIHVHLWNAKQKGNDVFHNTTS--NQISSQTVQKEYQPSVSSQPF-VSAGIG 638
V LHFIQC+ +H+ N K K H +S S++ + PSV S P V++G
Sbjct: 176 EVTLHFIQCVRMHIENTKSKVGSPAHTNSSVGTPFSNRLSEAATPPSVKSNPAPVTSGTN 235
Query: 639 GSKTDTYKLVLDIFQEPSSLASDHGLHIDEVARRLGLPMNKIKEAIDYYVDIGHIYSTID 818
GS+TD Y VL++F+EP+++ SDHG+H+D++A+R EAIDY+VD+GHIYSTID
Sbjct: 236 GSETDFYTQVLNVFREPANIESDHGVHVDDIAKR---------EAIDYHVDVGHIYSTID 286
Query: 819 DYHFKSACID 848
D+H+KSA +D
Sbjct: 287 DFHYKSAFVD 296
>ref|XP_004954499.1| PREDICTED: replication protein A 32 kDa subunit A-like [Setaria
italica]
Length = 274
Score = 256 bits (654), Expect = 1e-65
Identities = 138/264 (52%), Positives = 177/264 (67%), Gaps = 5/264 (1%)
Frame = +3
Query: 72 FGLSQSSQNPDSGFSKNRGATGLLPLTVKQIXXXXXXXXXXXXIK--VDGADATNIRLLG 245
F SQ++ + SK RGA+G +PLTVKQI VDG + NIRL+G
Sbjct: 11 FTSSQNAAADSTTPSKMRGASGTMPLTVKQIADAQQSGTGDKGAPFVVDGVETANIRLVG 70
Query: 246 LVMNKAERATDVHFTLDDGTGRIDVIRWVNDASDANETAVIQNGTYVSVSGSLKGFQDKK 425
+V KAER TDV FTLDDGTGR+D IRWVNDASD++ETA IQNG YVSV GSLKG Q++K
Sbjct: 71 MVNGKAERTTDVSFTLDDGTGRLDFIRWVNDASDSSETAAIQNGMYVSVIGSLKGLQERK 130
Query: 426 RAVAFSVSPVTDYNAVALHFIQCIHVHLWNAKQK-GNDVFHNTTSN-QISSQTVQKEYQP 599
RA AFS+ P+TD+N V LHFIQC+ +H+ N K K G+ N++ +S+ +
Sbjct: 131 RATAFSIRPITDFNEVTLHFIQCVRMHIENTKSKVGSPARTNSSMGLSVSNGFSESSTPT 190
Query: 600 SVSSQPF-VSAGIGGSKTDTYKLVLDIFQEPSSLASDHGLHIDEVARRLGLPMNKIKEAI 776
S+ S P V+ G G+ TD VL+IF+EP+++ S+HG+HI E+ +RL LP KI+EAI
Sbjct: 191 SLKSNPAPVTGGANGNDTDLNTQVLNIFREPANIESEHGVHIHEIVKRLKLPEEKIREAI 250
Query: 777 DYYVDIGHIYSTIDDYHFKSACID 848
Y D GHIYSTIDD+HFKSA D
Sbjct: 251 VYNEDCGHIYSTIDDFHFKSALTD 274
>ref|XP_006648165.1| PREDICTED: replication protein A 32 kDa subunit A-like [Oryza
brachyantha]
Length = 279
Score = 251 bits (641), Expect = 3e-64
Identities = 134/266 (50%), Positives = 174/266 (65%), Gaps = 10/266 (3%)
Frame = +3
Query: 72 FGLSQSSQNPDSGFSKNRGATGLLPLTVKQIXXXXXXXXXXXX---IKVDGADATNIRLL 242
F SQ++ + SK RGA+ PLTVKQI VDG + N+R++
Sbjct: 15 FTSSQNAAADSTTPSKTRGASSTTPLTVKQISEAQQSGSAGDKGAPFVVDGVETANVRVV 74
Query: 243 GLVMNKAERATDVHFTLDDGTGRIDVIRWVNDASDANETAVIQNGTYVSVSGSLKGFQDK 422
GLV K ER TDV FT+DDGTGR++ I+WVNDASD+ ETA +QNG YVSV GSLKG QD+
Sbjct: 75 GLVSGKTERNTDVSFTIDDGTGRLNFIKWVNDASDSAETAAVQNGMYVSVIGSLKGLQDR 134
Query: 423 KRAVAFSVSPVTDYNAVALHFIQCIHVHLWNAKQ------KGNDVFHNTTSNQISSQTVQ 584
KRA AF++ PVTDYN V LHFIQC+ +HL N K K N +++S S T
Sbjct: 135 KRATAFAIRPVTDYNEVTLHFIQCVRMHLENNKSSLASPAKTNSAMGSSSSYGFSEMTT- 193
Query: 585 KEYQPSVSSQPF-VSAGIGGSKTDTYKLVLDIFQEPSSLASDHGLHIDEVARRLGLPMNK 761
S S P VS+ GS+TD ++ VL IF+EP+++ S+HG+H+DE+ +R LP K
Sbjct: 194 ---PTSAKSNPAPVSSVTDGSETDLHEQVLKIFREPANVESEHGVHVDEIVKRFRLPTPK 250
Query: 762 IKEAIDYYVDIGHIYSTIDDYHFKSA 839
I+EA+DY VD+GHIYSTIDD+H+KSA
Sbjct: 251 IREAVDYLVDVGHIYSTIDDFHYKSA 276
>ref|XP_002454830.1| hypothetical protein SORBIDRAFT_04g038190 [Sorghum bicolor]
gi|241934661|gb|EES07806.1| hypothetical protein
SORBIDRAFT_04g038190 [Sorghum bicolor]
Length = 278
Score = 248 bits (632), Expect = 4e-63
Identities = 132/265 (49%), Positives = 174/265 (65%), Gaps = 6/265 (2%)
Frame = +3
Query: 72 FGLSQSSQNPDSGFSKNRGATGLLPLTVKQIXXXXXXXXXXXXIK--VDGADATNIRLLG 245
F SQ++ + SK RGA+ +PLTVKQ+ VDG + NIRL+G
Sbjct: 14 FTASQNAAADSTTPSKMRGASSTMPLTVKQVVDAQQSGTGEKGAPFVVDGVEMANIRLVG 73
Query: 246 LVMNKAERATDVHFTLDDGTGRIDVIRWVNDASDANETAVIQNGTYVSVSGSLKGFQDKK 425
+V K ER TDV FTLDDGTGR+D IRWVNDASD++ETA +QNG YV+V GSLKG Q++K
Sbjct: 74 MVNGKVERTTDVTFTLDDGTGRLDFIRWVNDASDSSETAAVQNGMYVAVIGSLKGLQERK 133
Query: 426 RAVAFSVSPVTDYNAVALHFIQCIHVHLWNAKQKGNDVFHNTTSN--QISSQTVQKEYQP 599
RA AFS+ P+TD+N V LHFIQC+ +H+ N K K ++S +S+ +
Sbjct: 134 RATAFSIRPITDFNEVTLHFIQCVRMHIENTKLKAGSPARTSSSMGVSVSNGFSESSTPT 193
Query: 600 SVSSQPF-VSAGIGGSKTDTYKLVLDIFQEPSSLASDHGLHIDEVARRL-GLPMNKIKEA 773
S+ S P ++ G GS TD K VL F EP++L S+HG+H+DEV ++ LP +KIKEA
Sbjct: 194 SLKSNPAPLTGGGSGSDTDLNKQVLHFFSEPANLESEHGVHVDEVYKQFKQLPKDKIKEA 253
Query: 774 IDYYVDIGHIYSTIDDYHFKSACID 848
I ++VD GH+YSTIDD+HFKSA D
Sbjct: 254 IAFHVDAGHLYSTIDDFHFKSALTD 278
>ref|NP_001048604.1| Os02g0829100 [Oryza sativa Japonica Group]
gi|75324106|sp|Q6K9U2.1|RFA2A_ORYSJ RecName:
Full=Replication protein A 32 kDa subunit A;
Short=OsRPA32A; AltName: Full=OsRPA32-1; AltName:
Full=Replication factor A protein 2A; AltName:
Full=Replication protein A 2A gi|9801268|emb|CAC03572.1|
replication protein A2 [Oryza sativa]
gi|48716324|dbj|BAD22936.1| replication protein A2
[Oryza sativa Japonica Group]
gi|113538135|dbj|BAF10518.1| Os02g0829100 [Oryza sativa
Japonica Group] gi|215737037|dbj|BAG95966.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 279
Score = 246 bits (629), Expect = 8e-63
Identities = 135/266 (50%), Positives = 171/266 (64%), Gaps = 10/266 (3%)
Frame = +3
Query: 72 FGLSQSSQNPDSGFSKNRGATGLLPLTVKQIXXXXXXXXXXXX---IKVDGADATNIRLL 242
F SQ++ + SK+RGA+ +PLTVKQI VDG + N+RL+
Sbjct: 15 FTSSQNAAADSTTPSKSRGASSTMPLTVKQISEAQQSGITGEKGAPFVVDGVETANVRLV 74
Query: 243 GLVMNKAERATDVHFTLDDGTGRIDVIRWVNDASDANETAVIQNGTYVSVSGSLKGFQDK 422
GLV K ER TDV FT+DDGTGR+D IRWVND +D+ ETA +QNG YVSV GSLKG Q++
Sbjct: 75 GLVSGKTERNTDVSFTIDDGTGRLDFIRWVNDGADSAETAAVQNGMYVSVIGSLKGLQER 134
Query: 423 KRAVAFSVSPVTDYNAVALHFIQCIHVHLWNAKQ------KGNDVFHNTTSNQISSQTVQ 584
KRA AF++ PVTDYN V LHFIQC+ +HL N K K +++SN S T
Sbjct: 135 KRATAFAIRPVTDYNEVTLHFIQCVRMHLENTKSQIGSPAKTYSAMGSSSSNGFSEMTT- 193
Query: 585 KEYQPSVSSQPF-VSAGIGGSKTDTYKLVLDIFQEPSSLASDHGLHIDEVARRLGLPMNK 761
SV S P V + GSKTD VL++F+EP+++ S+HG+HIDE+ +R LP K
Sbjct: 194 ---PTSVKSNPAPVLSVTNGSKTDLNTEVLNVFREPANVESEHGVHIDEIVKRFRLPEAK 250
Query: 762 IKEAIDYYVDIGHIYSTIDDYHFKSA 839
IK AIDY DIGHIYSTID+ H+KSA
Sbjct: 251 IKVAIDYLADIGHIYSTIDESHYKSA 276
>gb|EEE58102.1| hypothetical protein OsJ_08977 [Oryza sativa Japonica Group]
Length = 278
Score = 246 bits (629), Expect = 8e-63
Identities = 135/266 (50%), Positives = 171/266 (64%), Gaps = 10/266 (3%)
Frame = +3
Query: 72 FGLSQSSQNPDSGFSKNRGATGLLPLTVKQIXXXXXXXXXXXX---IKVDGADATNIRLL 242
F SQ++ + SK+RGA+ +PLTVKQI VDG + N+RL+
Sbjct: 14 FTSSQNAAADSTTPSKSRGASSTMPLTVKQISEAQQSGITGEKGAPFVVDGVETANVRLV 73
Query: 243 GLVMNKAERATDVHFTLDDGTGRIDVIRWVNDASDANETAVIQNGTYVSVSGSLKGFQDK 422
GLV K ER TDV FT+DDGTGR+D IRWVND +D+ ETA +QNG YVSV GSLKG Q++
Sbjct: 74 GLVSGKTERNTDVSFTIDDGTGRLDFIRWVNDGADSAETAAVQNGMYVSVIGSLKGLQER 133
Query: 423 KRAVAFSVSPVTDYNAVALHFIQCIHVHLWNAKQ------KGNDVFHNTTSNQISSQTVQ 584
KRA AF++ PVTDYN V LHFIQC+ +HL N K K +++SN S T
Sbjct: 134 KRATAFAIRPVTDYNEVTLHFIQCVRMHLENTKSQIGSPAKTYSAMGSSSSNGFSEMTT- 192
Query: 585 KEYQPSVSSQPF-VSAGIGGSKTDTYKLVLDIFQEPSSLASDHGLHIDEVARRLGLPMNK 761
SV S P V + GSKTD VL++F+EP+++ S+HG+HIDE+ +R LP K
Sbjct: 193 ---PTSVKSNPAPVLSVTNGSKTDLNTEVLNVFREPANVESEHGVHIDEIVKRFRLPEAK 249
Query: 762 IKEAIDYYVDIGHIYSTIDDYHFKSA 839
IK AIDY DIGHIYSTID+ H+KSA
Sbjct: 250 IKVAIDYLADIGHIYSTIDESHYKSA 275
>gb|EEC74294.1| hypothetical protein OsI_09546 [Oryza sativa Indica Group]
Length = 279
Score = 246 bits (629), Expect = 8e-63
Identities = 135/266 (50%), Positives = 171/266 (64%), Gaps = 10/266 (3%)
Frame = +3
Query: 72 FGLSQSSQNPDSGFSKNRGATGLLPLTVKQIXXXXXXXXXXXX---IKVDGADATNIRLL 242
F SQ++ + SK+RGA+ +PLTVKQI VDG + N+RL+
Sbjct: 15 FTSSQNAAADSTTPSKSRGASSTMPLTVKQISEAQQSGTTGEKGAPFVVDGVETANVRLV 74
Query: 243 GLVMNKAERATDVHFTLDDGTGRIDVIRWVNDASDANETAVIQNGTYVSVSGSLKGFQDK 422
GLV K ER TDV FT+DDGTGR+D IRWVND +D+ ETA +QNG YVSV GSLKG Q++
Sbjct: 75 GLVSGKTERNTDVSFTIDDGTGRLDFIRWVNDGADSAETAAVQNGMYVSVIGSLKGLQER 134
Query: 423 KRAVAFSVSPVTDYNAVALHFIQCIHVHLWNAKQ------KGNDVFHNTTSNQISSQTVQ 584
KRA AF++ PVTDYN V LHFIQC+ +HL N K K +++SN S T
Sbjct: 135 KRATAFAIRPVTDYNEVTLHFIQCVRMHLENTKSQIGGPAKTYSAMGSSSSNGFSEMTT- 193
Query: 585 KEYQPSVSSQPF-VSAGIGGSKTDTYKLVLDIFQEPSSLASDHGLHIDEVARRLGLPMNK 761
SV S P V + GSKTD VL++F+EP+++ S+HG+HIDE+ +R LP K
Sbjct: 194 ---PTSVKSNPAPVLSVTNGSKTDLNTEVLNVFREPANVESEHGVHIDEIVKRFRLPEAK 250
Query: 762 IKEAIDYYVDIGHIYSTIDDYHFKSA 839
IK AIDY DIGHIYSTID+ H+KSA
Sbjct: 251 IKVAIDYLADIGHIYSTIDESHYKSA 276
>dbj|BAB40535.1| replication protein A 30kDa [Oryza sativa Japonica Group]
Length = 279
Score = 246 bits (627), Expect = 1e-62
Identities = 135/266 (50%), Positives = 171/266 (64%), Gaps = 10/266 (3%)
Frame = +3
Query: 72 FGLSQSSQNPDSGFSKNRGATGLLPLTVKQIXXXXXXXXXXXX---IKVDGADATNIRLL 242
F SQ++ + SK+RGA+ +PLTVKQI VDG + N+RL+
Sbjct: 15 FTSSQNAAADSTTPSKSRGASSTMPLTVKQISEAQQSGITGEKGAPFVVDGVETANVRLV 74
Query: 243 GLVMNKAERATDVHFTLDDGTGRIDVIRWVNDASDANETAVIQNGTYVSVSGSLKGFQDK 422
GLV K ER TDV F +DDGTGR+D IRWVND +D+ ETA +QNG YVSV GSLKG Q++
Sbjct: 75 GLVSGKTERNTDVSFMIDDGTGRLDFIRWVNDGADSAETAAVQNGMYVSVIGSLKGLQER 134
Query: 423 KRAVAFSVSPVTDYNAVALHFIQCIHVHLWNAKQ------KGNDVFHNTTSNQISSQTVQ 584
KRA AF++ PVTDYN V LHFIQC+ +HL N K K +++SN S T
Sbjct: 135 KRATAFAIRPVTDYNEVTLHFIQCVRMHLENTKSQIGSPAKTYSAMGSSSSNGFSEMTT- 193
Query: 585 KEYQPSVSSQPF-VSAGIGGSKTDTYKLVLDIFQEPSSLASDHGLHIDEVARRLGLPMNK 761
SV S P V + GSKTD VL++F+EP+++ S+HG+HIDE+ +RL LP K
Sbjct: 194 ---PTSVKSNPAPVLSVTNGSKTDLNTEVLNVFREPANVESEHGVHIDEIVKRLRLPEAK 250
Query: 762 IKEAIDYYVDIGHIYSTIDDYHFKSA 839
IK AIDY DIGHIYSTID+ H+KSA
Sbjct: 251 IKVAIDYLADIGHIYSTIDESHYKSA 276
>ref|XP_004977372.1| PREDICTED: replication protein A 32 kDa subunit A-like [Setaria
italica]
Length = 275
Score = 245 bits (625), Expect = 2e-62
Identities = 133/262 (50%), Positives = 176/262 (67%), Gaps = 6/262 (2%)
Frame = +3
Query: 72 FGLSQSSQNPDSGFSKNRGATGLLPLTVKQIXXXXXXXXXXXXIK--VDGADATNIRLLG 245
F SQ++ + SK RGA+ +PLTVKQI VDG + NIRL+G
Sbjct: 14 FTSSQNAAADSTTPSKMRGASSTMPLTVKQIADAQQSGTGEKGAPFVVDGVEIANIRLVG 73
Query: 246 LVMNKAERATDVHFTLDDGTGRIDVIRWVNDASDANETAVIQNGTYVSVSGSLKGFQDKK 425
+V KAER TDV FTLDDGTGR+D IRWVNDASD++ETA +QNG YVSV GSLKG Q++K
Sbjct: 74 MVNGKAERTTDVSFTLDDGTGRLDFIRWVNDASDSSETAAVQNGMYVSVIGSLKGLQERK 133
Query: 426 RAVAFSVSPVTDYNAVALHFIQCIHVHLWNAKQK-GNDVFHNTTSNQISSQTVQKEYQP- 599
R AFS+ P+TD+N V LHFIQC+ +H+ N K K G+ +++ +S P
Sbjct: 134 RTTAFSIRPITDFNEVTLHFIQCVWMHIENTKLKVGSPARTSSSMGASASNGFGASSTPT 193
Query: 600 SVSSQPF-VSAGIGGS-KTDTYKLVLDIFQEPSSLASDHGLHIDEVARRLGLPMNKIKEA 773
S+ S P V++G GS +TD VL+IF EP+++ S+HG+HIDE+ +R LP +KI+EA
Sbjct: 194 SLKSNPAPVTSGASGSDETDLNTQVLNIFNEPANIESEHGVHIDEIIKRFKLPESKIREA 253
Query: 774 IDYYVDIGHIYSTIDDYHFKSA 839
I Y D+GHIYSTIDD+H+K+A
Sbjct: 254 IVYNADVGHIYSTIDDFHYKAA 275
>gb|EMS68679.1| Replication protein A 32 kDa subunit [Triticum urartu]
Length = 254
Score = 238 bits (607), Expect = 3e-60
Identities = 135/276 (48%), Positives = 172/276 (62%), Gaps = 7/276 (2%)
Frame = +3
Query: 42 MFSSQIEGGGFGLSQSSQNP--DSGFSKNRGATGLLPLTVKQIXXXXXXXXXXXXIK--V 209
MFSSQ++ +SQN DS +K RGA+G +PLTVKQI V
Sbjct: 2 MFSSQVDAFSPSQFTASQNAAADSTPNKFRGASGTMPLTVKQIADAQLAGTGEKGAPFVV 61
Query: 210 DGADATNIRLLGLVMNKAERATDVHFTLDDGTGRIDVIRWVNDASDANETAVIQNGTYVS 389
DG + N+RL+G+V KAER TDV FTLDDGTGRID IRWVND++D+ ETA IQNG YV+
Sbjct: 62 DGVETANVRLVGMVSGKAERNTDVSFTLDDGTGRIDFIRWVNDSADSAETAAIQNGMYVA 121
Query: 390 VSGSLKGFQDKKRAVAFSVSPVTDYNAVALHFIQCIHVHLWNAKQKGNDVFHNTTS--NQ 563
V GSLKG QDKKRA AF+V P+TDYN V LHFIQC+ +H+ N K K H +S
Sbjct: 122 VIGSLKGVQDKKRATAFAVRPITDYNEVTLHFIQCVRMHIENTKSKVGSPAHTNSSVGTP 181
Query: 564 ISSQTVQKEYQPSVSSQ-PFVSAGIGGSKTDTYKLVLDIFQEPSSLASDHGLHIDEVARR 740
S++ + PSV S V++G GS+TD Y VL++F+EP+++
Sbjct: 182 FSNRLSEAATPPSVKSNLAPVTSGTNGSETDFYTQVLNVFREPANM-------------- 227
Query: 741 LGLPMNKIKEAIDYYVDIGHIYSTIDDYHFKSACID 848
EAIDY+VD+GHIYSTIDD+H+KSA +D
Sbjct: 228 ---------EAIDYHVDVGHIYSTIDDFHYKSAFVD 254
>gb|ACG31701.1| replication protein A 32 kDa subunit [Zea mays]
Length = 273
Score = 225 bits (574), Expect = 2e-56
Identities = 120/259 (46%), Positives = 164/259 (63%), Gaps = 4/259 (1%)
Frame = +3
Query: 72 FGLSQSSQNPDSGFSKNRGATGLLPLTVKQIXXXXXXXXXXXXIK--VDGADATNIRLLG 245
F SQ++ + SK RGA+ +PLTVKQ+ V+G + NIRL+G
Sbjct: 14 FTSSQNAAADSTTPSKMRGASSTMPLTVKQVVDAQQSGTGEKGAPFIVNGVEMANIRLVG 73
Query: 246 LVMNKAERATDVHFTLDDGTGRIDVIRWVNDASDANETAVIQNGTYVSVSGSLKGFQDKK 425
+V K ER TDV FTLDDGTGR+D IRWVNDASD+ ETA IQNG Y++V GSLKG Q++K
Sbjct: 74 MVNAKVERTTDVTFTLDDGTGRLDFIRWVNDASDSFETAAIQNGMYIAVIGSLKGLQERK 133
Query: 426 RAVAFSVSPVTDYNAVALHFIQCIHVHLWNAKQKGNDVFHNTTSNQIS-SQTVQKEYQPS 602
RA AFS+ P+TD+N V LHFIQC+ +H+ N + K ++S +S S + P+
Sbjct: 134 RATAFSIRPITDFNEVTLHFIQCVRMHIENIELKAGSPARISSSMGVSFSNGFSESSTPT 193
Query: 603 VSSQPFVSAGIGGSKTDTYKLVLDIFQEPSSLASDHGLHIDEVARRLG-LPMNKIKEAID 779
G S TD + VL+ F EP++L S+HG+H+DEV +R LP +I +AID
Sbjct: 194 SLKSSPAPVTSGSSDTDLHTQVLNFFNEPANLESEHGVHVDEVLKRFKLLPKKQITDAID 253
Query: 780 YYVDIGHIYSTIDDYHFKS 836
Y +D G +YSTID++H+K+
Sbjct: 254 YNMDSGRLYSTIDEFHYKA 272
>gb|ACF80654.1| unknown [Zea mays] gi|413939586|gb|AFW74137.1| replication protein
A subunit [Zea mays]
Length = 273
Score = 225 bits (574), Expect = 2e-56
Identities = 120/259 (46%), Positives = 164/259 (63%), Gaps = 4/259 (1%)
Frame = +3
Query: 72 FGLSQSSQNPDSGFSKNRGATGLLPLTVKQIXXXXXXXXXXXXIK--VDGADATNIRLLG 245
F SQ++ + SK RGA+ +PLTVKQ+ V+G + NIRL+G
Sbjct: 14 FTSSQNAAADSTTPSKMRGASSTMPLTVKQVVDAQQSGTGEKGAPFIVNGVEMANIRLVG 73
Query: 246 LVMNKAERATDVHFTLDDGTGRIDVIRWVNDASDANETAVIQNGTYVSVSGSLKGFQDKK 425
+V K ER TDV FTLDDGTGR+D IRWVNDASD+ ETA IQNG Y++V GSLKG Q++K
Sbjct: 74 MVNAKVERTTDVTFTLDDGTGRLDFIRWVNDASDSFETAAIQNGMYIAVIGSLKGLQERK 133
Query: 426 RAVAFSVSPVTDYNAVALHFIQCIHVHLWNAKQK-GNDVFHNTTSNQISSQTVQKEYQPS 602
RA AFS+ P+TD+N V LHFIQC+ +H+ N + K G+ N++ S + P+
Sbjct: 134 RATAFSIRPITDFNEVTLHFIQCVRMHIENTELKAGSPARINSSMGVSFSNGFSESSTPT 193
Query: 603 VSSQPFVSAGIGGSKTDTYKLVLDIFQEPSSLASDHGLHIDEVARRLG-LPMNKIKEAID 779
G S TD + VL+ F EP++L S+HG+H+DEV +R LP +I +AID
Sbjct: 194 SLKSSPAPVTSGSSDTDLHTQVLNFFNEPANLESEHGVHVDEVLKRFKLLPKKQITDAID 253
Query: 780 YYVDIGHIYSTIDDYHFKS 836
Y +D G +YSTID++H+K+
Sbjct: 254 YNMDSGRLYSTIDEFHYKA 272
>ref|XP_006843762.1| hypothetical protein AMTR_s00007p00238780 [Amborella trichopoda]
gi|548846130|gb|ERN05437.1| hypothetical protein
AMTR_s00007p00238780 [Amborella trichopoda]
Length = 278
Score = 223 bits (568), Expect = 1e-55
Identities = 129/282 (45%), Positives = 168/282 (59%), Gaps = 16/282 (5%)
Frame = +3
Query: 42 MFSSQIEG------GGF---GLSQSSQNPDSGFSKNRGATGLLPLTVKQIXXXXXXXXXX 194
MF SQ +G GGF S S P S+NRG + L+P+TVKQI
Sbjct: 1 MFQSQFDGASLFSGGGFMPPSDSTQSSEPSPSSSRNRGNSTLIPMTVKQISQVLSDDNSS 60
Query: 195 XXIKVDGADATNIRLLGLVMNKAERATDVHFTLDDGTGRIDVIRWVNDASDANETAVIQN 374
V+ ++ N+RL+G+V NK ER TDV F LDDGTGRIDV RWVNDA+D+NE A+++N
Sbjct: 61 AG--VEALESNNVRLVGMVANKVERVTDVQFILDDGTGRIDVHRWVNDATDSNEMAIVKN 118
Query: 375 GTYVSVSGSLKGFQDKKRAVAFSVSPVTDYNAVALHFIQCIHVHLWNAKQKGNDVFHNTT 554
G YV V G LK FQ KK A AFSV P+TD+N + HF++CI+VHL N KQ G +
Sbjct: 119 GIYVRVIGHLKSFQGKKHATAFSVRPITDFNEITCHFLECIYVHLSNTKQMG-----GSP 173
Query: 555 SNQISSQTVQKEYQPSVSSQPFV------SAGIGGSKTDTYKLVLDIFQEPSSLASDHGL 716
Q SS T P +S P + GS+ D V +F EP +L +D GL
Sbjct: 174 QPQKSSVTTALGNGPMGNSTPAKHIQFTGHPALVGSEDDINTRVKKVFMEPDALKNDEGL 233
Query: 717 HIDEVARRL-GLPMNKIKEAIDYYVDIGHIYSTIDDYHFKSA 839
H+DEVA+RL G+ +I +AID+ V G IYSTI+DY++K+A
Sbjct: 234 HVDEVAQRLPGISKQRIMKAIDFLVGEGEIYSTINDYYYKAA 275
>gb|ADE75749.1| unknown [Picea sitchensis]
Length = 281
Score = 220 bits (560), Expect = 8e-55
Identities = 126/270 (46%), Positives = 168/270 (62%), Gaps = 8/270 (2%)
Frame = +3
Query: 51 SQIEGGGFGLSQSSQNPDSGFS---KNRGATGLLPLTVKQIXXXXXXXXXXXX-IKVDGA 218
S GGGF SQ++Q + GFS K+ ATGLLPLTVKQI +DG
Sbjct: 12 SLFSGGGFMPSQATQVNEGGFSSVRKSGTATGLLPLTVKQISQATQKPSDENSNFTIDGV 71
Query: 219 DATNIRLLGLVMNKAERATDVHFTLDDGTGRIDVIRWVNDASDANETAVIQNGTYVSVSG 398
D N+ L+G+V NK ER TDV F LDDGTGR++V RWVNDA ++ E A +QNG+YV V G
Sbjct: 72 DVNNVTLVGMVFNKEERVTDVSFYLDDGTGRMEVKRWVNDAMESAEMADVQNGSYVRVHG 131
Query: 399 SLKGFQDKKRAVAFSVSPVTDYNAVALHFIQCIHVHLWNAKQKGNDVFHNTTSNQISSQT 578
L+ FQ+KK AFSV PVTD+N V H ++CI VHL+N K +G N+ S
Sbjct: 132 HLRSFQNKKLVNAFSVRPVTDFNEVTFHSLECIFVHLYNMKVQGGATQPNSASPVAKGPP 191
Query: 579 VQKEYQPSVSSQPFVSAG---IGGSKTDTYKLVLDIFQEPSSLASDHGLHIDEVARRL-G 746
P S F+S G +GG+K D ++V IF+EP++LA +HG+H+D+V RRL G
Sbjct: 192 TPFSNTP--SHNQFMSPGPVSVGGAK-DLNRMVQSIFEEPANLAIEHGVHVDDVVRRLHG 248
Query: 747 LPMNKIKEAIDYYVDIGHIYSTIDDYHFKS 836
+I E+I + ++ G+IYSTID+ H+KS
Sbjct: 249 FTKKQIMESIAFLINEGYIYSTIDEDHYKS 278
>ref|XP_002268721.2| PREDICTED: replication protein A 32 kDa subunit [Vitis vinifera]
Length = 275
Score = 215 bits (547), Expect = 3e-53
Identities = 120/265 (45%), Positives = 161/265 (60%), Gaps = 2/265 (0%)
Frame = +3
Query: 48 SSQIEGGGFGLSQSSQNPDSGFS--KNRGATGLLPLTVKQIXXXXXXXXXXXXIKVDGAD 221
++ GGGF SQ++Q + GFS +NR LLPLTVKQI +DG +
Sbjct: 10 NAAFSGGGFMPSQATQAAEPGFSPARNRDTQALLPLTVKQISEAFLSSDDKSNFLIDGVE 69
Query: 222 ATNIRLLGLVMNKAERATDVHFTLDDGTGRIDVIRWVNDASDANETAVIQNGTYVSVSGS 401
N+ L+G+V NKAER TDV F LDDGTGRID RWVN+A D E I +G YV V G
Sbjct: 70 VNNVTLVGMVFNKAERVTDVGFMLDDGTGRIDCNRWVNEAVDTKEMEGILDGMYVRVHGH 129
Query: 402 LKGFQDKKRAVAFSVSPVTDYNAVALHFIQCIHVHLWNAKQKGNDVFHNTTSNQISSQTV 581
LKGFQ K+ FS+ PVTD+N +A HFI+CI+VH++N K + + +N + T
Sbjct: 130 LKGFQGKRHLNVFSIRPVTDFNEIASHFIECIYVHIYNTKSRAGGPTQSHVTNP-AIGTP 188
Query: 582 QKEYQPSVSSQPFVSAGIGGSKTDTYKLVLDIFQEPSSLASDHGLHIDEVARRLGLPMNK 761
K YQ S +Q G G D +LV+D Q+P SLA D G+ DE+A++L +P++K
Sbjct: 189 LKGYQASQPNQFSGQYGAGLKGVD--QLVIDYLQQPQSLARDQGVGRDELAQQLNVPVDK 246
Query: 762 IKEAIDYYVDIGHIYSTIDDYHFKS 836
I E+I + G IYSTID++H+KS
Sbjct: 247 IMESIRSLEEEGLIYSTIDEWHYKS 271
>emb|CBI17841.3| unnamed protein product [Vitis vinifera]
Length = 277
Score = 214 bits (546), Expect = 3e-53
Identities = 123/268 (45%), Positives = 162/268 (60%), Gaps = 5/268 (1%)
Frame = +3
Query: 48 SSQIEGGGFGLSQSSQNPDSGFS--KNRGATGLLPLTVKQIXXXXXXXXXXXXIKVDGAD 221
++ GGGF SQ++Q + GFS +NR LLPLTVKQI +DG +
Sbjct: 10 NAAFSGGGFMPSQATQAAEPGFSPARNRDTQALLPLTVKQISEAFLSSDDKSNFLIDGVE 69
Query: 222 ATNIRLLGLVMNKAERATDVHFTLDDGTGRIDVIRWVNDASDANETAVIQNGTYVSVSGS 401
N+ L+G+V NKAER TDV F LDDGTGRID RWVN+A D E I +G YV V G
Sbjct: 70 VNNVTLVGMVFNKAERVTDVGFMLDDGTGRIDCNRWVNEAVDTKEMEGILDGMYVRVHGH 129
Query: 402 LKGFQDKKRAVAFSVSPVTDYNAVALHFIQCIHVHLWNAK---QKGNDVFHNTTSNQISS 572
LKGFQ K+ FS+ PVTD+N +A HFI+CI+VH++N K Q G + T+ I
Sbjct: 130 LKGFQGKRHLNVFSIRPVTDFNEIASHFIECIYVHIYNTKSRVQAGGPTQSHVTNPAIG- 188
Query: 573 QTVQKEYQPSVSSQPFVSAGIGGSKTDTYKLVLDIFQEPSSLASDHGLHIDEVARRLGLP 752
T K YQ S +Q G G D +LV+D Q+P SLA D G+ DE+A++L +P
Sbjct: 189 -TPLKGYQASQPNQFSGQYGAGLKGVD--QLVIDYLQQPQSLARDQGVGRDELAQQLNVP 245
Query: 753 MNKIKEAIDYYVDIGHIYSTIDDYHFKS 836
++KI E+I + G IYSTID++H+KS
Sbjct: 246 VDKIMESIRSLEEEGLIYSTIDEWHYKS 273
>ref|XP_006361577.1| PREDICTED: replication protein A 32 kDa subunit A-like [Solanum
tuberosum]
Length = 272
Score = 210 bits (535), Expect = 7e-52
Identities = 123/269 (45%), Positives = 161/269 (59%), Gaps = 6/269 (2%)
Frame = +3
Query: 48 SSQIE---GGGFGLSQSSQNPDSG--FSKNRGATGLLPLTVKQIXXXXXXXXXXXXIKVD 212
SSQ++ GGGF SQS+Q D+ +K+R LLPLTVKQI +D
Sbjct: 4 SSQLDSFSGGGFMPSQSTQAADASRTSAKSRENPPLLPLTVKQISQAVQSSDEKSNFVID 63
Query: 213 GADATNIRLLGLVMNKAERATDVHFTLDDGTGRIDVIRWVNDASDANETAVIQNGTYVSV 392
G D N+RL+G+ K+ER TDV FT+DDGTGRI+ RWVNDA D E I +G YV V
Sbjct: 64 GVDVNNVRLVGMAYKKSERVTDVSFTIDDGTGRIECTRWVNDAVDTKEVEQISDGMYVRV 123
Query: 393 SGSLKGFQDKKRAVAFSVSPVTDYNAVALHFIQCIHVHLWNAK-QKGNDVFHNTTSNQIS 569
G LKGFQ K + V F++ P+TDYN VA HF++CI+VH N K Q G V +T S
Sbjct: 124 HGHLKGFQGKTQLVVFAIRPITDYNEVATHFLECIYVHHCNRKSQSGLSV--STPSKSDV 181
Query: 570 SQTVQKEYQPSVSSQPFVSAGIGGSKTDTYKLVLDIFQEPSSLASDHGLHIDEVARRLGL 749
V S+Q + I G K K+V+D ++PSSLA + G+H +E+A+ L +
Sbjct: 182 PAAVSAPSSGYNSNQFSANLSIDGLK-GIEKIVIDYLEQPSSLAQEKGIHRNEIAQHLRV 240
Query: 750 PMNKIKEAIDYYVDIGHIYSTIDDYHFKS 836
P+ KIKEAI+ G +YSTID+ HFKS
Sbjct: 241 PLEKIKEAIESLESEGLVYSTIDECHFKS 269
>ref|NP_001047510.1| Os02g0633400 [Oryza sativa Japonica Group]
gi|75323568|sp|Q6H7J5.1|RFA2B_ORYSJ RecName:
Full=Replication protein A 32 kDa subunit B;
Short=OsRPA32B; AltName: Full=OsRPA32-2; AltName:
Full=Replication factor A protein 2B; AltName:
Full=Replication protein A 2B
gi|49388178|dbj|BAD25304.1| putative replication protein
A2 [Oryza sativa Japonica Group]
gi|113537041|dbj|BAF09424.1| Os02g0633400 [Oryza sativa
Japonica Group] gi|215707148|dbj|BAG93608.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 298
Score = 210 bits (535), Expect = 7e-52
Identities = 119/283 (42%), Positives = 170/283 (60%), Gaps = 11/283 (3%)
Frame = +3
Query: 21 DHEGHTTMFSSQIEGGGFGLSQSSQNPDS------GFSKNRGATGLLPLTVKQIXXXXXX 182
+++G SS GGGF SQ++ + GF K+R A LLPLTVKQI
Sbjct: 13 NYDGGGGNASSLFGGGGFMPSQATNAAEGTSGGGGGFPKSRNAQALLPLTVKQIMDASQT 72
Query: 183 XXXXXXIKVDGADATNIRLLGLVMNKAERATDVHFTLDDGTGRIDVIRWVNDASDANETA 362
V+G + + +RL+G ++NK +R TDV FTLDDGTGR+ V RW ND++D E A
Sbjct: 73 NDDKSNFAVNGMEVSTVRLVGRMLNKLDRVTDVSFTLDDGTGRVPVNRWENDSTDTKEMA 132
Query: 363 VIQNGTYVSVSGSLKGFQDKKRAVAFSVSPVTDYNAVALHFIQCIHVHLWNAKQKGNDVF 542
IQNG YV V+G LKGFQ K++ VA+SV +T++N V HF+ C+HVHL + K + V
Sbjct: 133 DIQNGDYVIVNGGLKGFQGKRQVVAYSVRRITNFNDVTHHFLHCVHVHLELTRPK-SQVN 191
Query: 543 HNT---TSNQISSQTVQKEYQPSVSSQ--PFVSAGIGGSKTDTYKLVLDIFQEPSSLASD 707
NT T NQ + Q +++Q F + G+ T+ LVL++F +P+ + D
Sbjct: 192 ANTATGTPNQTMPRDSMAYNQSPLTNQASTFSAPQNTGTGTNMIDLVLNVFHDPAVMNDD 251
Query: 708 HGLHIDEVARRLGLPMNKIKEAIDYYVDIGHIYSTIDDYHFKS 836
HG+ +D V+RRL LP + + I VD+GH+Y+TIDD+H+KS
Sbjct: 252 HGVGVDYVSRRLNLPEETVGKIIIDQVDLGHLYATIDDHHYKS 294