BLASTX nr result
ID: Zingiber23_contig00012158
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00012158
(269 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADW83731.1| ribosomal protein L4 [Musa acuminata AAA Group] 138 9e-31
ref|XP_006339056.1| PREDICTED: 60S ribosomal protein L4-1-like [... 132 4e-29
ref|XP_004249507.1| PREDICTED: 60S ribosomal protein L4-1-like i... 132 4e-29
gb|EMJ13159.1| hypothetical protein PRUPE_ppa006523mg [Prunus pe... 131 1e-28
gb|EMJ06479.1| hypothetical protein PRUPE_ppa006524mg [Prunus pe... 130 2e-28
gb|EOX92303.1| Ribosomal protein L4/L1 family [Theobroma cacao] 129 3e-28
ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis... 129 4e-28
ref|XP_004249593.1| PREDICTED: 60S ribosomal protein L4-1-like [... 128 9e-28
ref|XP_004246702.1| PREDICTED: 60S ribosomal protein L4-1-like [... 128 9e-28
ref|NP_001275624.1| 60S ribosomal protein L4-1-like [Solanum tub... 128 9e-28
ref|NP_001274928.1| uncharacterized protein LOC102577718 [Solanu... 128 9e-28
ref|XP_004249506.1| PREDICTED: 60S ribosomal protein L4-1-like i... 127 1e-27
ref|XP_006428899.1| hypothetical protein CICLE_v10011875mg [Citr... 127 2e-27
ref|XP_006405018.1| hypothetical protein EUTSA_v10000184mg [Eutr... 127 2e-27
ref|XP_003537248.1| PREDICTED: 60S ribosomal protein L4-like iso... 127 2e-27
emb|CBI32622.3| unnamed protein product [Vitis vinifera] 127 2e-27
ref|XP_002274975.1| PREDICTED: 60S ribosomal protein L4 [Vitis v... 127 2e-27
ref|XP_003542496.1| PREDICTED: 60S ribosomal protein L4-like [Gl... 127 2e-27
gb|ABK96375.1| unknown [Populus trichocarpa x Populus deltoides] 127 2e-27
ref|NP_187574.1| 60S ribosomal protein L4-1 [Arabidopsis thalian... 126 3e-27
>gb|ADW83731.1| ribosomal protein L4 [Musa acuminata AAA Group]
Length = 301
Score = 138 bits (347), Expect = 9e-31
Identities = 71/89 (79%), Positives = 74/89 (83%)
Frame = +3
Query: 3 EVQSVVRPIKKDAKRRHIKKNPLKNLYTLLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 182
EVQSVVRPIKK+ KRR +KKNPLKNLYTLLKLNPYAKTARRM+LLAEAQRVKAKKEKLDK
Sbjct: 198 EVQSVVRPIKKEVKRRTLKKNPLKNLYTLLKLNPYAKTARRMALLAEAQRVKAKKEKLDK 257
Query: 183 KRTNLSKEEXXXXXXXXXXWYKTMISDSD 269
K T L KEE WYKTMISDSD
Sbjct: 258 KSTQLPKEEAAAVKAAGRAWYKTMISDSD 286
>ref|XP_006339056.1| PREDICTED: 60S ribosomal protein L4-1-like [Solanum tuberosum]
Length = 409
Score = 132 bits (333), Expect = 4e-29
Identities = 69/89 (77%), Positives = 73/89 (82%)
Frame = +3
Query: 3 EVQSVVRPIKKDAKRRHIKKNPLKNLYTLLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 182
EVQSVVRPIKKDAKR +KKNPLKNL LLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK
Sbjct: 306 EVQSVVRPIKKDAKRATLKKNPLKNLNVLLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 365
Query: 183 KRTNLSKEEXXXXXXXXXXWYKTMISDSD 269
KR ++KEE W+KTMISDSD
Sbjct: 366 KRHQITKEEASAIRSAGKGWFKTMISDSD 394
>ref|XP_004249507.1| PREDICTED: 60S ribosomal protein L4-1-like isoform 2 [Solanum
lycopersicum]
Length = 409
Score = 132 bits (333), Expect = 4e-29
Identities = 69/89 (77%), Positives = 73/89 (82%)
Frame = +3
Query: 3 EVQSVVRPIKKDAKRRHIKKNPLKNLYTLLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 182
EVQSVVRPIKKDAKR +KKNPLKNL LLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK
Sbjct: 306 EVQSVVRPIKKDAKRATLKKNPLKNLNVLLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 365
Query: 183 KRTNLSKEEXXXXXXXXXXWYKTMISDSD 269
KR ++KEE W+KTMISDSD
Sbjct: 366 KRHQITKEEASAIRSAGKGWFKTMISDSD 394
>gb|EMJ13159.1| hypothetical protein PRUPE_ppa006523mg [Prunus persica]
Length = 408
Score = 131 bits (329), Expect = 1e-28
Identities = 68/89 (76%), Positives = 73/89 (82%)
Frame = +3
Query: 3 EVQSVVRPIKKDAKRRHIKKNPLKNLYTLLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 182
EVQSVVRPIKK+ KR +KKNPLKNL TLLKLNPYAKTARRMSLLAEA+RVKAKKEKLDK
Sbjct: 305 EVQSVVRPIKKEVKRAPLKKNPLKNLNTLLKLNPYAKTARRMSLLAEAERVKAKKEKLDK 364
Query: 183 KRTNLSKEEXXXXXXXXXXWYKTMISDSD 269
KR +SKEE WY+TMISDSD
Sbjct: 365 KRKPISKEEASTIKAAGKAWYQTMISDSD 393
>gb|EMJ06479.1| hypothetical protein PRUPE_ppa006524mg [Prunus persica]
Length = 408
Score = 130 bits (326), Expect = 2e-28
Identities = 68/89 (76%), Positives = 72/89 (80%)
Frame = +3
Query: 3 EVQSVVRPIKKDAKRRHIKKNPLKNLYTLLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 182
EVQSVVRPIKK+ KR +KKNPLKNL TLLKLNPYAKTARRM+LLAE QRVKAKKEKLDK
Sbjct: 305 EVQSVVRPIKKEFKRAPLKKNPLKNLNTLLKLNPYAKTARRMALLAEEQRVKAKKEKLDK 364
Query: 183 KRTNLSKEEXXXXXXXXXXWYKTMISDSD 269
KR +SKEE WYKTMISDSD
Sbjct: 365 KRKPISKEEASTIKAAGKAWYKTMISDSD 393
>gb|EOX92303.1| Ribosomal protein L4/L1 family [Theobroma cacao]
Length = 406
Score = 129 bits (325), Expect = 3e-28
Identities = 67/89 (75%), Positives = 72/89 (80%)
Frame = +3
Query: 3 EVQSVVRPIKKDAKRRHIKKNPLKNLYTLLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 182
EVQSVV+PIKKD KR +KKNPLKNL +LKLNPYAKTARRMSLLAEAQRVKAKKEKLDK
Sbjct: 303 EVQSVVKPIKKDVKRAPMKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 362
Query: 183 KRTNLSKEEXXXXXXXXXXWYKTMISDSD 269
KR +SKEE WY+TMISDSD
Sbjct: 363 KRKPISKEEAVAIKSAGKAWYQTMISDSD 391
>ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis vinifera]
Length = 405
Score = 129 bits (324), Expect = 4e-28
Identities = 66/89 (74%), Positives = 72/89 (80%)
Frame = +3
Query: 3 EVQSVVRPIKKDAKRRHIKKNPLKNLYTLLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 182
EVQSVVRPIKK+ KR +KKNPLKNL T+LKLNPYAKTARRM+LLAEAQRVKAKKEKLDK
Sbjct: 302 EVQSVVRPIKKEVKRAPMKKNPLKNLNTMLKLNPYAKTARRMALLAEAQRVKAKKEKLDK 361
Query: 183 KRTNLSKEEXXXXXXXXXXWYKTMISDSD 269
KR + KEE WY+TMISDSD
Sbjct: 362 KRAQIPKEEAAAIKAAGKAWYQTMISDSD 390
>ref|XP_004249593.1| PREDICTED: 60S ribosomal protein L4-1-like [Solanum lycopersicum]
Length = 407
Score = 128 bits (321), Expect = 9e-28
Identities = 66/89 (74%), Positives = 71/89 (79%)
Frame = +3
Query: 3 EVQSVVRPIKKDAKRRHIKKNPLKNLYTLLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 182
EVQSVVRPIKKD KR +KKNPLKNL LLKLNPYAKTA+RMSLLAEAQRVKAK EKLDK
Sbjct: 304 EVQSVVRPIKKDVKRATLKKNPLKNLNVLLKLNPYAKTAKRMSLLAEAQRVKAKNEKLDK 363
Query: 183 KRTNLSKEEXXXXXXXXXXWYKTMISDSD 269
KR ++KEE W+KTMISDSD
Sbjct: 364 KRHQITKEEASAIRAAGTSWFKTMISDSD 392
>ref|XP_004246702.1| PREDICTED: 60S ribosomal protein L4-1-like [Solanum lycopersicum]
Length = 406
Score = 128 bits (321), Expect = 9e-28
Identities = 69/90 (76%), Positives = 72/90 (80%), Gaps = 1/90 (1%)
Frame = +3
Query: 3 EVQSVVRPIKKDA-KRRHIKKNPLKNLYTLLKLNPYAKTARRMSLLAEAQRVKAKKEKLD 179
EVQSVVRPIKKD KR +KKNPLKNL LLKLNPYAKTARRMSLLAEAQRVKAKKEKLD
Sbjct: 302 EVQSVVRPIKKDVNKRATLKKNPLKNLNVLLKLNPYAKTARRMSLLAEAQRVKAKKEKLD 361
Query: 180 KKRTNLSKEEXXXXXXXXXXWYKTMISDSD 269
KKR ++KEE WYKTMISDSD
Sbjct: 362 KKRHQITKEEASAIKGASHSWYKTMISDSD 391
>ref|NP_001275624.1| 60S ribosomal protein L4-1-like [Solanum tuberosum]
gi|418731475|gb|AFX67037.1| 60S ribosomal protein L1
[Solanum tuberosum]
Length = 407
Score = 128 bits (321), Expect = 9e-28
Identities = 66/89 (74%), Positives = 71/89 (79%)
Frame = +3
Query: 3 EVQSVVRPIKKDAKRRHIKKNPLKNLYTLLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 182
EVQSVVRPIKKD KR +KKNPLKNL LLKLNPYAKTA+RMSLLAEAQRVKAK EKLDK
Sbjct: 304 EVQSVVRPIKKDVKRATLKKNPLKNLNVLLKLNPYAKTAKRMSLLAEAQRVKAKNEKLDK 363
Query: 183 KRTNLSKEEXXXXXXXXXXWYKTMISDSD 269
KR ++KEE W+KTMISDSD
Sbjct: 364 KRHQITKEEASAIRAAGTSWFKTMISDSD 392
>ref|NP_001274928.1| uncharacterized protein LOC102577718 [Solanum tuberosum]
gi|77999245|gb|ABB16969.1| unknown [Solanum tuberosum]
Length = 405
Score = 128 bits (321), Expect = 9e-28
Identities = 69/90 (76%), Positives = 72/90 (80%), Gaps = 1/90 (1%)
Frame = +3
Query: 3 EVQSVVRPIKKDA-KRRHIKKNPLKNLYTLLKLNPYAKTARRMSLLAEAQRVKAKKEKLD 179
EVQSVVRPIKKD KR +KKNPLKNL LLKLNPYAKTARRMSLLAEAQRVKAKKEKLD
Sbjct: 301 EVQSVVRPIKKDVNKRATLKKNPLKNLNVLLKLNPYAKTARRMSLLAEAQRVKAKKEKLD 360
Query: 180 KKRTNLSKEEXXXXXXXXXXWYKTMISDSD 269
KKR ++KEE WYKTMISDSD
Sbjct: 361 KKRHQITKEEASAIRGASHSWYKTMISDSD 390
>ref|XP_004249506.1| PREDICTED: 60S ribosomal protein L4-1-like isoform 1 [Solanum
lycopersicum]
Length = 411
Score = 127 bits (320), Expect = 1e-27
Identities = 69/91 (75%), Positives = 73/91 (80%), Gaps = 2/91 (2%)
Frame = +3
Query: 3 EVQSVVRPIKKDAKRRHIKKNPLKNLYTLLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 182
EVQSVVRPIKKDAKR +KKNPLKNL LLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK
Sbjct: 306 EVQSVVRPIKKDAKRATLKKNPLKNLNVLLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 365
Query: 183 KRTNL--SKEEXXXXXXXXXXWYKTMISDSD 269
KR + +KEE W+KTMISDSD
Sbjct: 366 KRHQIKTNKEEASAIRSAGKGWFKTMISDSD 396
>ref|XP_006428899.1| hypothetical protein CICLE_v10011875mg [Citrus clementina]
gi|568853908|ref|XP_006480579.1| PREDICTED: 60S
ribosomal protein L4-like [Citrus sinensis]
gi|557530956|gb|ESR42139.1| hypothetical protein
CICLE_v10011875mg [Citrus clementina]
Length = 405
Score = 127 bits (319), Expect = 2e-27
Identities = 66/89 (74%), Positives = 72/89 (80%)
Frame = +3
Query: 3 EVQSVVRPIKKDAKRRHIKKNPLKNLYTLLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 182
EVQSVVRPIK + KR +KKNPLKNL TLL+LNPYAKTARRMSLLAEAQRVKAKKEKLDK
Sbjct: 302 EVQSVVRPIKTEVKRAPMKKNPLKNLNTLLRLNPYAKTARRMSLLAEAQRVKAKKEKLDK 361
Query: 183 KRTNLSKEEXXXXXXXXXXWYKTMISDSD 269
KR ++KEE WY+TMISDSD
Sbjct: 362 KRKPITKEEAAAIKSAGKAWYQTMISDSD 390
>ref|XP_006405018.1| hypothetical protein EUTSA_v10000184mg [Eutrema salsugineum]
gi|557106146|gb|ESQ46471.1| hypothetical protein
EUTSA_v10000184mg [Eutrema salsugineum]
Length = 406
Score = 127 bits (319), Expect = 2e-27
Identities = 65/89 (73%), Positives = 73/89 (82%)
Frame = +3
Query: 3 EVQSVVRPIKKDAKRRHIKKNPLKNLYTLLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 182
EVQSVVRPIKKDAKR +KKNPLKNL +LKLNPYAKTARRMSLLAEA+RVK+KKEKL++
Sbjct: 303 EVQSVVRPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTARRMSLLAEAERVKSKKEKLER 362
Query: 183 KRTNLSKEEXXXXXXXXXXWYKTMISDSD 269
KR +SKEE WY+TMISDSD
Sbjct: 363 KRKPISKEESAKIKAAGKAWYQTMISDSD 391
>ref|XP_003537248.1| PREDICTED: 60S ribosomal protein L4-like isoform 1 [Glycine max]
Length = 405
Score = 127 bits (319), Expect = 2e-27
Identities = 64/89 (71%), Positives = 72/89 (80%)
Frame = +3
Query: 3 EVQSVVRPIKKDAKRRHIKKNPLKNLYTLLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 182
EVQSVVRPIKKD K+ +KKNPLKNL ++LKLNPYAKTA+RM+LLAEAQRVKAKKEKLDK
Sbjct: 302 EVQSVVRPIKKDVKKATLKKNPLKNLNSMLKLNPYAKTAKRMALLAEAQRVKAKKEKLDK 361
Query: 183 KRTNLSKEEXXXXXXXXXXWYKTMISDSD 269
KR +SKEE WY TM+SDSD
Sbjct: 362 KRKTVSKEEASAIKSAGKAWYHTMVSDSD 390
>emb|CBI32622.3| unnamed protein product [Vitis vinifera]
Length = 344
Score = 127 bits (319), Expect = 2e-27
Identities = 65/89 (73%), Positives = 72/89 (80%)
Frame = +3
Query: 3 EVQSVVRPIKKDAKRRHIKKNPLKNLYTLLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 182
EVQSVVRPIKK+ KR +KKNPLKNL T+LKLNPYAKTARRM+LLAEAQRVKAK+EKLDK
Sbjct: 241 EVQSVVRPIKKEVKRAPMKKNPLKNLNTMLKLNPYAKTARRMALLAEAQRVKAKQEKLDK 300
Query: 183 KRTNLSKEEXXXXXXXXXXWYKTMISDSD 269
KR + KEE WY+TMISDSD
Sbjct: 301 KRKQIPKEEVAAIKAAGKAWYQTMISDSD 329
>ref|XP_002274975.1| PREDICTED: 60S ribosomal protein L4 [Vitis vinifera]
Length = 406
Score = 127 bits (319), Expect = 2e-27
Identities = 65/89 (73%), Positives = 72/89 (80%)
Frame = +3
Query: 3 EVQSVVRPIKKDAKRRHIKKNPLKNLYTLLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 182
EVQSVVRPIKK+ KR +KKNPLKNL T+LKLNPYAKTARRM+LLAEAQRVKAK+EKLDK
Sbjct: 303 EVQSVVRPIKKEVKRAPMKKNPLKNLNTMLKLNPYAKTARRMALLAEAQRVKAKQEKLDK 362
Query: 183 KRTNLSKEEXXXXXXXXXXWYKTMISDSD 269
KR + KEE WY+TMISDSD
Sbjct: 363 KRKQIPKEEVAAIKAAGKAWYQTMISDSD 391
>ref|XP_003542496.1| PREDICTED: 60S ribosomal protein L4-like [Glycine max]
Length = 405
Score = 127 bits (318), Expect = 2e-27
Identities = 64/89 (71%), Positives = 71/89 (79%)
Frame = +3
Query: 3 EVQSVVRPIKKDAKRRHIKKNPLKNLYTLLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 182
EVQSVVRPIKKD KR +KKNPLKNL ++LKLNPYAKTA+RM+LLAEAQRVK KKEKLDK
Sbjct: 302 EVQSVVRPIKKDVKRATLKKNPLKNLNSMLKLNPYAKTAKRMALLAEAQRVKVKKEKLDK 361
Query: 183 KRTNLSKEEXXXXXXXXXXWYKTMISDSD 269
KR +SKEE WY TM+SDSD
Sbjct: 362 KRKTVSKEEASAIKAAGKAWYHTMVSDSD 390
>gb|ABK96375.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 407
Score = 127 bits (318), Expect = 2e-27
Identities = 65/89 (73%), Positives = 72/89 (80%)
Frame = +3
Query: 3 EVQSVVRPIKKDAKRRHIKKNPLKNLYTLLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 182
EVQSVV+PIKK+ KR +KKNPLKNL LLKLNPYAKTARRM+LLAEA+RVK+KKEKLDK
Sbjct: 304 EVQSVVKPIKKEVKRATLKKNPLKNLNVLLKLNPYAKTARRMALLAEAERVKSKKEKLDK 363
Query: 183 KRTNLSKEEXXXXXXXXXXWYKTMISDSD 269
KR +SKEE WYKTMISDSD
Sbjct: 364 KRKPVSKEELAAAKAAGKAWYKTMISDSD 392
>ref|NP_187574.1| 60S ribosomal protein L4-1 [Arabidopsis thaliana]
gi|17369604|sp|Q9SF40.1|RL4A_ARATH RecName: Full=60S
ribosomal protein L4-1; Short=L1
gi|6682241|gb|AAF23293.1|AC016661_18 putative 60S
ribosomal protein L1 [Arabidopsis thaliana]
gi|15982715|gb|AAL09727.1| AT3g09630/F11F8_22
[Arabidopsis thaliana] gi|27311665|gb|AAO00798.1|
putative 60S ribosomal protein L1 [Arabidopsis thaliana]
gi|30725664|gb|AAP37854.1| At3g09630 [Arabidopsis
thaliana] gi|332641268|gb|AEE74789.1| 60S ribosomal
protein L4-1 [Arabidopsis thaliana]
Length = 406
Score = 126 bits (317), Expect = 3e-27
Identities = 65/89 (73%), Positives = 71/89 (79%)
Frame = +3
Query: 3 EVQSVVRPIKKDAKRRHIKKNPLKNLYTLLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 182
E+QSVV PIKKDAKR +KKNPLKNL +LKLNPYAKTA+RMSLLAEAQRVKAKKEKL K
Sbjct: 303 EIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLAK 362
Query: 183 KRTNLSKEEXXXXXXXXXXWYKTMISDSD 269
KR ++KEE WYKTMISDSD
Sbjct: 363 KRKTVTKEEALAIKAAGKSWYKTMISDSD 391