BLASTX nr result

ID: Zingiber23_contig00012113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00012113
         (258 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA49685.1| TPA: putative nucleolin-like family protein [Zea...   127   1e-27
ref|XP_004982918.1| PREDICTED: nucleolin 2-like isoform X2 [Seta...   123   3e-26
ref|XP_004982917.1| PREDICTED: nucleolin 2-like isoform X1 [Seta...   123   3e-26
gb|EAZ32021.1| hypothetical protein OsJ_16200 [Oryza sativa Japo...   122   6e-26
ref|NP_001053909.1| Os04g0620700 [Oryza sativa Japonica Group] g...   122   6e-26
emb|CAH66982.1| H0714H04.9 [Oryza sativa Indica Group]                120   1e-25
ref|XP_002467108.1| hypothetical protein SORBIDRAFT_01g019710 [S...   120   2e-25
ref|XP_006652843.1| PREDICTED: nucleolin 2-like [Oryza brachyantha]   119   4e-25
ref|XP_003581679.1| PREDICTED: uncharacterized protein LOC100838...   119   4e-25
ref|XP_002277195.2| PREDICTED: uncharacterized protein LOC100262...   117   2e-24
ref|XP_006484546.1| PREDICTED: nucleolin 2-like [Citrus sinensis]     116   3e-24
ref|XP_006437567.1| hypothetical protein CICLE_v10030875mg [Citr...   116   3e-24
ref|XP_004972658.1| PREDICTED: nucleolin 1-like [Setaria italica]     115   5e-24
emb|CBI27136.3| unnamed protein product [Vitis vinifera]              115   8e-24
ref|XP_002307174.1| nucleolin family protein [Populus trichocarp...   113   2e-23
ref|XP_006836341.1| hypothetical protein AMTR_s00092p00090110 [A...   113   3e-23
ref|XP_006380518.1| hypothetical protein POPTR_0007s07800g [Popu...   111   9e-23
ref|XP_006380517.1| hypothetical protein POPTR_0007s07800g [Popu...   111   9e-23
ref|XP_002310655.1| predicted protein [Populus trichocarpa]           111   9e-23
gb|ABK94939.1| unknown [Populus trichocarpa]                          111   9e-23

>tpg|DAA49685.1| TPA: putative nucleolin-like family protein [Zea mays]
          Length = 196

 Score =  127 bits (320), Expect = 1e-27
 Identities = 57/72 (79%), Positives = 66/72 (91%)
 Frame = +3

Query: 3   DQVRSSLEEHFGSCGDITRISVPKDYETGAPKGIAYIDFKDQESFNKAYELNGSDLGGYS 182
           DQ+R++LEEHFGSCGDITRIS+PKDY+TG  KG+AY+DFKD +S NKAYELNG+DLGGYS
Sbjct: 50  DQIRTALEEHFGSCGDITRISIPKDYDTGVSKGMAYMDFKDPDSLNKAYELNGTDLGGYS 109

Query: 183 LTVDEAKPRTDN 218
           L VDEAKPR DN
Sbjct: 110 LYVDEAKPRPDN 121


>ref|XP_004982918.1| PREDICTED: nucleolin 2-like isoform X2 [Setaria italica]
          Length = 674

 Score =  123 bits (308), Expect = 3e-26
 Identities = 57/72 (79%), Positives = 65/72 (90%)
 Frame = +3

Query: 3   DQVRSSLEEHFGSCGDITRISVPKDYETGAPKGIAYIDFKDQESFNKAYELNGSDLGGYS 182
           DQ+RS+LE  FGSCG+ITR+S+PKDYETGA KG+AY+DFKD +S NKAYELNGSDLGGYS
Sbjct: 530 DQIRSALEGLFGSCGEITRVSIPKDYETGACKGMAYMDFKDPDSLNKAYELNGSDLGGYS 589

Query: 183 LTVDEAKPRTDN 218
           L VDEAKPR DN
Sbjct: 590 LYVDEAKPRPDN 601


>ref|XP_004982917.1| PREDICTED: nucleolin 2-like isoform X1 [Setaria italica]
          Length = 679

 Score =  123 bits (308), Expect = 3e-26
 Identities = 57/72 (79%), Positives = 65/72 (90%)
 Frame = +3

Query: 3   DQVRSSLEEHFGSCGDITRISVPKDYETGAPKGIAYIDFKDQESFNKAYELNGSDLGGYS 182
           DQ+RS+LE  FGSCG+ITR+S+PKDYETGA KG+AY+DFKD +S NKAYELNGSDLGGYS
Sbjct: 530 DQIRSALEGLFGSCGEITRVSIPKDYETGACKGMAYMDFKDPDSLNKAYELNGSDLGGYS 589

Query: 183 LTVDEAKPRTDN 218
           L VDEAKPR DN
Sbjct: 590 LYVDEAKPRPDN 601


>gb|EAZ32021.1| hypothetical protein OsJ_16200 [Oryza sativa Japonica Group]
          Length = 728

 Score =  122 bits (305), Expect = 6e-26
 Identities = 55/71 (77%), Positives = 64/71 (90%)
 Frame = +3

Query: 6   QVRSSLEEHFGSCGDITRISVPKDYETGAPKGIAYIDFKDQESFNKAYELNGSDLGGYSL 185
           Q+R+SLEEHFGSCG+ITR+S+PKDYETGA KG+AY+DF D  S +KAYELNGSDLGGYSL
Sbjct: 585 QIRNSLEEHFGSCGEITRVSIPKDYETGASKGMAYMDFADNGSLSKAYELNGSDLGGYSL 644

Query: 186 TVDEAKPRTDN 218
            VDEA+PR DN
Sbjct: 645 YVDEARPRPDN 655


>ref|NP_001053909.1| Os04g0620700 [Oryza sativa Japonica Group]
           gi|75327488|sp|Q7XTT4.2|NUCL2_ORYSJ RecName:
           Full=Nucleolin 2; AltName: Full=Protein NUCLEOLIN LIKE 2
           gi|38344339|emb|CAD41755.2| OSJNBa0058K23.21 [Oryza
           sativa Japonica Group] gi|113565480|dbj|BAF15823.1|
           Os04g0620700 [Oryza sativa Japonica Group]
           gi|215737156|dbj|BAG96085.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 707

 Score =  122 bits (305), Expect = 6e-26
 Identities = 55/71 (77%), Positives = 64/71 (90%)
 Frame = +3

Query: 6   QVRSSLEEHFGSCGDITRISVPKDYETGAPKGIAYIDFKDQESFNKAYELNGSDLGGYSL 185
           Q+R+SLEEHFGSCG+ITR+S+PKDYETGA KG+AY+DF D  S +KAYELNGSDLGGYSL
Sbjct: 564 QIRNSLEEHFGSCGEITRVSIPKDYETGASKGMAYMDFADNGSLSKAYELNGSDLGGYSL 623

Query: 186 TVDEAKPRTDN 218
            VDEA+PR DN
Sbjct: 624 YVDEARPRPDN 634


>emb|CAH66982.1| H0714H04.9 [Oryza sativa Indica Group]
          Length = 704

 Score =  120 bits (302), Expect = 1e-25
 Identities = 54/71 (76%), Positives = 64/71 (90%)
 Frame = +3

Query: 6   QVRSSLEEHFGSCGDITRISVPKDYETGAPKGIAYIDFKDQESFNKAYELNGSDLGGYSL 185
           Q+R+SLEEHFGSCG+ITR+S+P+DYETGA KG+AY+DF D  S +KAYELNGSDLGGYSL
Sbjct: 561 QIRNSLEEHFGSCGEITRVSIPRDYETGASKGMAYMDFADNGSLSKAYELNGSDLGGYSL 620

Query: 186 TVDEAKPRTDN 218
            VDEA+PR DN
Sbjct: 621 YVDEARPRPDN 631


>ref|XP_002467108.1| hypothetical protein SORBIDRAFT_01g019710 [Sorghum bicolor]
           gi|241920962|gb|EER94106.1| hypothetical protein
           SORBIDRAFT_01g019710 [Sorghum bicolor]
          Length = 664

 Score =  120 bits (301), Expect = 2e-25
 Identities = 55/72 (76%), Positives = 64/72 (88%)
 Frame = +3

Query: 3   DQVRSSLEEHFGSCGDITRISVPKDYETGAPKGIAYIDFKDQESFNKAYELNGSDLGGYS 182
           DQ+RS+LEEHF SCGDITRIS+PKDY+TGA KG+AY+DFKD +S NKAYE+NG+ LG YS
Sbjct: 527 DQIRSALEEHFRSCGDITRISIPKDYDTGASKGMAYMDFKDPDSLNKAYEMNGTYLGDYS 586

Query: 183 LTVDEAKPRTDN 218
           L VDEAKPR DN
Sbjct: 587 LYVDEAKPRPDN 598


>ref|XP_006652843.1| PREDICTED: nucleolin 2-like [Oryza brachyantha]
          Length = 712

 Score =  119 bits (298), Expect = 4e-25
 Identities = 52/72 (72%), Positives = 65/72 (90%)
 Frame = +3

Query: 3   DQVRSSLEEHFGSCGDITRISVPKDYETGAPKGIAYIDFKDQESFNKAYELNGSDLGGYS 182
           DQ+R+SLEEHFG+CG+ITR+S+PKDY+TGA KG+AY+DF D  + +KA+ELNGSDLGGYS
Sbjct: 570 DQIRTSLEEHFGTCGEITRVSIPKDYDTGASKGMAYMDFADNGALSKAFELNGSDLGGYS 629

Query: 183 LTVDEAKPRTDN 218
           L VDEA+PR DN
Sbjct: 630 LYVDEARPRPDN 641


>ref|XP_003581679.1| PREDICTED: uncharacterized protein LOC100838448 [Brachypodium
           distachyon]
          Length = 741

 Score =  119 bits (298), Expect = 4e-25
 Identities = 52/72 (72%), Positives = 66/72 (91%)
 Frame = +3

Query: 3   DQVRSSLEEHFGSCGDITRISVPKDYETGAPKGIAYIDFKDQESFNKAYELNGSDLGGYS 182
           DQ+RSSL++HFGSCG+ITR+S+PKDYETGA KGIAY++F DQ S +KA+EL+GSDLGG+S
Sbjct: 587 DQIRSSLQKHFGSCGEITRVSIPKDYETGASKGIAYMEFSDQSSLSKAFELSGSDLGGFS 646

Query: 183 LTVDEAKPRTDN 218
           L VDEA+P+ DN
Sbjct: 647 LYVDEARPKQDN 658


>ref|XP_002277195.2| PREDICTED: uncharacterized protein LOC100262769 [Vitis vinifera]
          Length = 664

 Score =  117 bits (292), Expect = 2e-24
 Identities = 53/72 (73%), Positives = 66/72 (91%)
 Frame = +3

Query: 3   DQVRSSLEEHFGSCGDITRISVPKDYETGAPKGIAYIDFKDQESFNKAYELNGSDLGGYS 182
           DQVRS+LEE+FGSCGDI+RIS+PKDYE+G+ KGIAY+DF D +SFNKA ELNG++LGGY+
Sbjct: 515 DQVRSTLEEYFGSCGDISRISIPKDYESGSVKGIAYMDFTDGDSFNKALELNGTELGGYT 574

Query: 183 LTVDEAKPRTDN 218
           L V+EAKPR D+
Sbjct: 575 LNVEEAKPRGDS 586


>ref|XP_006484546.1| PREDICTED: nucleolin 2-like [Citrus sinensis]
          Length = 686

 Score =  116 bits (291), Expect = 3e-24
 Identities = 53/71 (74%), Positives = 64/71 (90%)
 Frame = +3

Query: 3   DQVRSSLEEHFGSCGDITRISVPKDYETGAPKGIAYIDFKDQESFNKAYELNGSDLGGYS 182
           DQVR+SLEEHFGSCG+ITRISVPKDY+TG+ KGIAY+DF D +SFNKA E++G+++GGYS
Sbjct: 544 DQVRASLEEHFGSCGEITRISVPKDYDTGSVKGIAYLDFTDADSFNKALEMSGTEIGGYS 603

Query: 183 LTVDEAKPRTD 215
           L VDEAK R D
Sbjct: 604 LVVDEAKQRGD 614


>ref|XP_006437567.1| hypothetical protein CICLE_v10030875mg [Citrus clementina]
           gi|557539763|gb|ESR50807.1| hypothetical protein
           CICLE_v10030875mg [Citrus clementina]
          Length = 686

 Score =  116 bits (291), Expect = 3e-24
 Identities = 53/71 (74%), Positives = 64/71 (90%)
 Frame = +3

Query: 3   DQVRSSLEEHFGSCGDITRISVPKDYETGAPKGIAYIDFKDQESFNKAYELNGSDLGGYS 182
           DQVR+SLEEHFGSCG+ITRISVPKDY+TG+ KGIAY+DF D +SFNKA E++G+++GGYS
Sbjct: 544 DQVRASLEEHFGSCGEITRISVPKDYDTGSVKGIAYLDFTDADSFNKALEMSGTEIGGYS 603

Query: 183 LTVDEAKPRTD 215
           L VDEAK R D
Sbjct: 604 LVVDEAKQRGD 614


>ref|XP_004972658.1| PREDICTED: nucleolin 1-like [Setaria italica]
          Length = 567

 Score =  115 bits (289), Expect = 5e-24
 Identities = 51/71 (71%), Positives = 63/71 (88%)
 Frame = +3

Query: 3   DQVRSSLEEHFGSCGDITRISVPKDYETGAPKGIAYIDFKDQESFNKAYELNGSDLGGYS 182
           D++RSSLE+HFG CG+ITR+S+P DYETGA KGIAY+DFKDQ+S +KA EL+GSD+GGY 
Sbjct: 417 DKIRSSLEQHFGECGEITRVSIPTDYETGAVKGIAYLDFKDQDSMSKALELSGSDIGGYE 476

Query: 183 LTVDEAKPRTD 215
           L VDEAKP+ D
Sbjct: 477 LFVDEAKPKGD 487


>emb|CBI27136.3| unnamed protein product [Vitis vinifera]
          Length = 691

 Score =  115 bits (287), Expect = 8e-24
 Identities = 52/69 (75%), Positives = 64/69 (92%)
 Frame = +3

Query: 3   DQVRSSLEEHFGSCGDITRISVPKDYETGAPKGIAYIDFKDQESFNKAYELNGSDLGGYS 182
           DQVRS+LEE+FGSCGDI+RIS+PKDYE+G+ KGIAY+DF D +SFNKA ELNG++LGGY+
Sbjct: 561 DQVRSTLEEYFGSCGDISRISIPKDYESGSVKGIAYMDFTDGDSFNKALELNGTELGGYT 620

Query: 183 LTVDEAKPR 209
           L V+EAKPR
Sbjct: 621 LNVEEAKPR 629


>ref|XP_002307174.1| nucleolin family protein [Populus trichocarpa]
           gi|222856623|gb|EEE94170.1| nucleolin family protein
           [Populus trichocarpa]
          Length = 660

 Score =  113 bits (283), Expect = 2e-23
 Identities = 51/72 (70%), Positives = 63/72 (87%)
 Frame = +3

Query: 3   DQVRSSLEEHFGSCGDITRISVPKDYETGAPKGIAYIDFKDQESFNKAYELNGSDLGGYS 182
           D++RSSL+EHFGSCG+I+RIS+P DYETGA KG+AY++F D ++ NKA+ELNGS LG   
Sbjct: 507 DEIRSSLQEHFGSCGEISRISIPTDYETGAIKGMAYLEFNDADAMNKAFELNGSQLGESY 566

Query: 183 LTVDEAKPRTDN 218
           LTVDEAKPRTDN
Sbjct: 567 LTVDEAKPRTDN 578


>ref|XP_006836341.1| hypothetical protein AMTR_s00092p00090110 [Amborella trichopoda]
           gi|548838859|gb|ERM99194.1| hypothetical protein
           AMTR_s00092p00090110 [Amborella trichopoda]
          Length = 662

 Score =  113 bits (282), Expect = 3e-23
 Identities = 50/69 (72%), Positives = 60/69 (86%)
 Frame = +3

Query: 3   DQVRSSLEEHFGSCGDITRISVPKDYETGAPKGIAYIDFKDQESFNKAYELNGSDLGGYS 182
           DQ+RSSLEEHFG CG+ITR+++PKDY+  APKGIAY+DF D  + +KA ELNGSDLGGYS
Sbjct: 517 DQIRSSLEEHFGQCGEITRLAIPKDYDLDAPKGIAYMDFSDSNALSKALELNGSDLGGYS 576

Query: 183 LTVDEAKPR 209
           LTV+EA PR
Sbjct: 577 LTVEEAMPR 585


>ref|XP_006380518.1| hypothetical protein POPTR_0007s07800g [Populus trichocarpa]
           gi|550334370|gb|ERP58315.1| hypothetical protein
           POPTR_0007s07800g [Populus trichocarpa]
          Length = 590

 Score =  111 bits (278), Expect = 9e-23
 Identities = 48/72 (66%), Positives = 63/72 (87%)
 Frame = +3

Query: 3   DQVRSSLEEHFGSCGDITRISVPKDYETGAPKGIAYIDFKDQESFNKAYELNGSDLGGYS 182
           D++RSSL+EHFGSCG+I R+S+P DY+TGA KG+AY++F D ++ +KA+ELNGS LG Y 
Sbjct: 453 DEIRSSLQEHFGSCGEIKRVSIPTDYDTGAIKGMAYLEFNDADALSKAFELNGSQLGEYR 512

Query: 183 LTVDEAKPRTDN 218
           LTVDEAKPR+DN
Sbjct: 513 LTVDEAKPRSDN 524


>ref|XP_006380517.1| hypothetical protein POPTR_0007s07800g [Populus trichocarpa]
           gi|550334369|gb|ERP58314.1| hypothetical protein
           POPTR_0007s07800g [Populus trichocarpa]
          Length = 548

 Score =  111 bits (278), Expect = 9e-23
 Identities = 48/72 (66%), Positives = 63/72 (87%)
 Frame = +3

Query: 3   DQVRSSLEEHFGSCGDITRISVPKDYETGAPKGIAYIDFKDQESFNKAYELNGSDLGGYS 182
           D++RSSL+EHFGSCG+I R+S+P DY+TGA KG+AY++F D ++ +KA+ELNGS LG Y 
Sbjct: 411 DEIRSSLQEHFGSCGEIKRVSIPTDYDTGAIKGMAYLEFNDADALSKAFELNGSQLGEYR 470

Query: 183 LTVDEAKPRTDN 218
           LTVDEAKPR+DN
Sbjct: 471 LTVDEAKPRSDN 482


>ref|XP_002310655.1| predicted protein [Populus trichocarpa]
          Length = 548

 Score =  111 bits (278), Expect = 9e-23
 Identities = 48/72 (66%), Positives = 63/72 (87%)
 Frame = +3

Query: 3   DQVRSSLEEHFGSCGDITRISVPKDYETGAPKGIAYIDFKDQESFNKAYELNGSDLGGYS 182
           D++RSSL+EHFGSCG+I R+S+P DY+TGA KG+AY++F D ++ +KA+ELNGS LG Y 
Sbjct: 411 DEIRSSLQEHFGSCGEIKRVSIPTDYDTGAIKGMAYLEFNDADALSKAFELNGSQLGEYR 470

Query: 183 LTVDEAKPRTDN 218
           LTVDEAKPR+DN
Sbjct: 471 LTVDEAKPRSDN 482


>gb|ABK94939.1| unknown [Populus trichocarpa]
          Length = 590

 Score =  111 bits (278), Expect = 9e-23
 Identities = 48/72 (66%), Positives = 63/72 (87%)
 Frame = +3

Query: 3   DQVRSSLEEHFGSCGDITRISVPKDYETGAPKGIAYIDFKDQESFNKAYELNGSDLGGYS 182
           D++RSSL+EHFGSCG+I R+S+P DY+TGA KG+AY++F D ++ +KA+ELNGS LG Y 
Sbjct: 453 DEIRSSLQEHFGSCGEIKRVSIPTDYDTGAIKGMAYLEFNDADALSKAFELNGSQLGEYC 512

Query: 183 LTVDEAKPRTDN 218
           LTVDEAKPR+DN
Sbjct: 513 LTVDEAKPRSDN 524


Top