BLASTX nr result
ID: Zingiber23_contig00012098
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00012098
(471 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA98929.1| DNA-directed RNA polymerase II 14.5 kDa polypepti... 194 8e-48
ref|NP_001067017.1| Os12g0560400 [Oryza sativa Japonica Group] g... 194 8e-48
ref|XP_006664099.1| PREDICTED: DNA-directed RNA polymerases II, ... 193 2e-47
ref|XP_003579291.1| PREDICTED: DNA-directed RNA polymerase II su... 193 2e-47
ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II su... 193 2e-47
ref|XP_002312337.1| DNA-directed RNA polymerase II family protei... 192 3e-47
gb|EXB55730.1| DNA-directed RNA polymerase II subunit [Morus not... 192 5e-47
ref|XP_004134242.1| PREDICTED: DNA-directed RNA polymerase II su... 191 7e-47
gb|EMJ24706.1| hypothetical protein PRUPE_ppa013594mg [Prunus pe... 191 9e-47
ref|XP_004295094.1| PREDICTED: DNA-directed RNA polymerase II su... 191 1e-46
ref|XP_002443356.1| hypothetical protein SORBIDRAFT_08g018130 [S... 190 1e-46
ref|NP_001150634.1| LOC100284267 [Zea mays] gi|195640756|gb|ACG3... 189 3e-46
gb|ESW10991.1| hypothetical protein PHAVU_009G256100g [Phaseolus... 189 4e-46
ref|XP_006419407.1| hypothetical protein CICLE_v10006256mg [Citr... 189 4e-46
ref|XP_003546327.1| PREDICTED: DNA-directed RNA polymerases II, ... 189 4e-46
ref|XP_002976415.1| hypothetical protein SELMODRAFT_232741 [Sela... 188 7e-46
ref|NP_001235803.1| uncharacterized protein LOC100305979 [Glycin... 188 7e-46
gb|EOY06688.1| RNA polymerases M/15 Kd subunit [Theobroma cacao] 187 2e-45
ref|XP_004962772.1| PREDICTED: DNA-directed RNA polymerase II su... 186 2e-45
ref|XP_002519205.1| DNA-directed RNA polymerase II, putative [Ri... 186 2e-45
>gb|ABA98929.1| DNA-directed RNA polymerase II 14.5 kDa polypeptide, putative,
expressed [Oryza sativa Japonica Group]
gi|125537020|gb|EAY83508.1| hypothetical protein
OsI_38722 [Oryza sativa Indica Group]
gi|125579719|gb|EAZ20865.1| hypothetical protein
OsJ_36504 [Oryza sativa Japonica Group]
Length = 114
Score = 194 bits (494), Expect = 8e-48
Identities = 85/100 (85%), Positives = 94/100 (94%)
Frame = +1
Query: 1 YPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAADPTLPRTKAV 180
YP+EDR+QKILL+ACRNCDHQEVADNNCVYRNV+ H GE TQ+LQDVA DPTLPRTKAV
Sbjct: 15 YPKEDRDQKILLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQDVAGDPTLPRTKAV 74
Query: 181 KCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 300
+CAVCGH EAVFFQAT+RGEEGMTLFFVCCNPSCG+RWR+
Sbjct: 75 RCAVCGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRE 114
>ref|NP_001067017.1| Os12g0560400 [Oryza sativa Japonica Group]
gi|113649524|dbj|BAF30036.1| Os12g0560400, partial
[Oryza sativa Japonica Group]
Length = 104
Score = 194 bits (494), Expect = 8e-48
Identities = 85/100 (85%), Positives = 94/100 (94%)
Frame = +1
Query: 1 YPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAADPTLPRTKAV 180
YP+EDR+QKILL+ACRNCDHQEVADNNCVYRNV+ H GE TQ+LQDVA DPTLPRTKAV
Sbjct: 5 YPKEDRDQKILLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQDVAGDPTLPRTKAV 64
Query: 181 KCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 300
+CAVCGH EAVFFQAT+RGEEGMTLFFVCCNPSCG+RWR+
Sbjct: 65 RCAVCGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRE 104
>ref|XP_006664099.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
9B-like [Oryza brachyantha]
Length = 114
Score = 193 bits (491), Expect = 2e-47
Identities = 84/100 (84%), Positives = 94/100 (94%)
Frame = +1
Query: 1 YPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAADPTLPRTKAV 180
YP+EDR+QKILL+ACRNCDHQEVADNNCVYRNV+ H GE TQ+LQDVA DPTLPRTK+V
Sbjct: 15 YPKEDRDQKILLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQDVAGDPTLPRTKSV 74
Query: 181 KCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 300
+CAVCGH EAVFFQAT+RGEEGMTLFFVCCNPSCG+RWR+
Sbjct: 75 RCAVCGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRE 114
>ref|XP_003579291.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
[Brachypodium distachyon] gi|326497375|dbj|BAK02272.1|
predicted protein [Hordeum vulgare subsp. vulgare]
Length = 114
Score = 193 bits (491), Expect = 2e-47
Identities = 84/100 (84%), Positives = 93/100 (93%)
Frame = +1
Query: 1 YPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAADPTLPRTKAV 180
YP+EDR+QK+LLFACRNCDHQEVADNNCVYRNV+ H GE TQ+LQDVA DPTLPRTK V
Sbjct: 15 YPKEDRDQKVLLFACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQDVAGDPTLPRTKEV 74
Query: 181 KCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 300
+CAVCGH EAVFFQAT+RGEEGMTLFFVCCNPSCG+RWR+
Sbjct: 75 RCAVCGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRE 114
>ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9 [Vitis
vinifera] gi|147769002|emb|CAN66735.1| hypothetical
protein VITISV_024186 [Vitis vinifera]
gi|296083263|emb|CBI22899.3| unnamed protein product
[Vitis vinifera]
Length = 114
Score = 193 bits (491), Expect = 2e-47
Identities = 85/100 (85%), Positives = 94/100 (94%)
Frame = +1
Query: 1 YPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAADPTLPRTKAV 180
YP+EDREQKILL+ACRNCDHQEVA+NNCVYRN I H VGE+TQ+LQDVAADPTLPRTK+V
Sbjct: 15 YPKEDREQKILLYACRNCDHQEVAENNCVYRNEIHHSVGERTQVLQDVAADPTLPRTKSV 74
Query: 181 KCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 300
+CA C H EAVFFQAT+RGEEGMTLFFVCCNP+CGYRWRD
Sbjct: 75 RCAQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD 114
>ref|XP_002312337.1| DNA-directed RNA polymerase II family protein [Populus trichocarpa]
gi|222852157|gb|EEE89704.1| DNA-directed RNA polymerase
II family protein [Populus trichocarpa]
Length = 114
Score = 192 bits (489), Expect = 3e-47
Identities = 84/100 (84%), Positives = 93/100 (93%)
Frame = +1
Query: 1 YPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAADPTLPRTKAV 180
YPREDR+QKILL+ACRNCDHQE+AD+NCVYRN + H V E+TQ+LQDVAADPTLPRTKAV
Sbjct: 15 YPREDRDQKILLYACRNCDHQEIADDNCVYRNEVHHSVAERTQVLQDVAADPTLPRTKAV 74
Query: 181 KCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 300
C VC HPEAVFFQATSRGEEGMTLFFVCCNP+CG+RWRD
Sbjct: 75 TCTVCKHPEAVFFQATSRGEEGMTLFFVCCNPNCGHRWRD 114
>gb|EXB55730.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
Length = 192
Score = 192 bits (487), Expect = 5e-47
Identities = 84/100 (84%), Positives = 94/100 (94%)
Frame = +1
Query: 1 YPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAADPTLPRTKAV 180
YP+EDR+QKILL+ACRNCDHQEVADNNCVYRN I H VGE+TQ+LQDVAADPTLPRTK+V
Sbjct: 93 YPKEDRDQKILLYACRNCDHQEVADNNCVYRNEIHHSVGERTQVLQDVAADPTLPRTKSV 152
Query: 181 KCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 300
+CA C H EAVFFQAT+RGEEGMTLFFVCCNP+CG+RWRD
Sbjct: 153 RCAQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 192
Score = 109 bits (272), Expect = 4e-22
Identities = 49/74 (66%), Positives = 59/74 (79%)
Frame = +1
Query: 1 YPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAADPTLPRTKAV 180
YP+EDR K LL+ACRNCDHQEVA+NNCV+RN + + + QILQDV ADPTLPRT+ V
Sbjct: 15 YPKEDRANKTLLYACRNCDHQEVAENNCVFRNEL--NLSVRAQILQDVTADPTLPRTRTV 72
Query: 181 KCAVCGHPEAVFFQ 222
+CA C H +AVFFQ
Sbjct: 73 RCAQCSHEQAVFFQ 86
>ref|XP_004134242.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
[Cucumis sativus] gi|449517969|ref|XP_004166016.1|
PREDICTED: DNA-directed RNA polymerase II subunit
RPB9-like [Cucumis sativus]
Length = 114
Score = 191 bits (486), Expect = 7e-47
Identities = 84/100 (84%), Positives = 94/100 (94%)
Frame = +1
Query: 1 YPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAADPTLPRTKAV 180
YP+EDR++KILL+ACRNCDHQEVADNNCVYRN I H VGE+TQ+LQDVAADPTLPRTKAV
Sbjct: 15 YPKEDRDEKILLYACRNCDHQEVADNNCVYRNEIHHAVGERTQVLQDVAADPTLPRTKAV 74
Query: 181 KCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 300
+CA C H EAVFFQAT+RGEEGMTLFFVCCNP+CG+RWRD
Sbjct: 75 RCAQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114
>gb|EMJ24706.1| hypothetical protein PRUPE_ppa013594mg [Prunus persica]
Length = 114
Score = 191 bits (485), Expect = 9e-47
Identities = 85/100 (85%), Positives = 94/100 (94%)
Frame = +1
Query: 1 YPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAADPTLPRTKAV 180
YP+ED++QKILL+ACRNCDHQEVADNNCVYRN I H VGE+TQILQDVAADPTLPRTKAV
Sbjct: 15 YPKEDKDQKILLYACRNCDHQEVADNNCVYRNEIHHAVGERTQILQDVAADPTLPRTKAV 74
Query: 181 KCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 300
+C+ C H EAVFFQAT+RGEEGMTLFFVCCNPSCG+RWRD
Sbjct: 75 RCSECKHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRD 114
>ref|XP_004295094.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
[Fragaria vesca subsp. vesca]
Length = 114
Score = 191 bits (484), Expect = 1e-46
Identities = 85/100 (85%), Positives = 93/100 (93%)
Frame = +1
Query: 1 YPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAADPTLPRTKAV 180
YP+E++E KILL+ACRNCDHQEVADNNCVYRN I H VGE+TQILQDVAADPTLPRTKAV
Sbjct: 15 YPKENKEDKILLYACRNCDHQEVADNNCVYRNEIHHSVGERTQILQDVAADPTLPRTKAV 74
Query: 181 KCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 300
+CA C H EAVFFQAT+RGEEGMTLFFVCCNP+CGYRWRD
Sbjct: 75 RCAQCKHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD 114
>ref|XP_002443356.1| hypothetical protein SORBIDRAFT_08g018130 [Sorghum bicolor]
gi|241944049|gb|EES17194.1| hypothetical protein
SORBIDRAFT_08g018130 [Sorghum bicolor]
Length = 114
Score = 190 bits (483), Expect = 1e-46
Identities = 83/100 (83%), Positives = 92/100 (92%)
Frame = +1
Query: 1 YPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAADPTLPRTKAV 180
YP+EDREQK+LL+ACRNCDHQEVADNNCVYRNV+ H GE TQ+LQDVA DPTLPRTK+V
Sbjct: 15 YPKEDREQKVLLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQDVAGDPTLPRTKSV 74
Query: 181 KCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 300
+CA CGH EAVFFQAT+RGEEGMTLFFVCCNPSCG RWR+
Sbjct: 75 RCASCGHGEAVFFQATARGEEGMTLFFVCCNPSCGNRWRE 114
>ref|NP_001150634.1| LOC100284267 [Zea mays] gi|195640756|gb|ACG39846.1| DNA-directed
RNA polymerase II 14.5 kDa polypeptide [Zea mays]
gi|414878124|tpg|DAA55255.1| TPA: DNA-directed RNA
polymerase subunit [Zea mays]
Length = 114
Score = 189 bits (480), Expect = 3e-46
Identities = 82/100 (82%), Positives = 92/100 (92%)
Frame = +1
Query: 1 YPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAADPTLPRTKAV 180
YP+EDREQK+LL+ACRNCDHQEVADNNCVYRNV+ H GE TQ+LQDVA DPTLPRTK+V
Sbjct: 15 YPKEDREQKVLLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQDVAGDPTLPRTKSV 74
Query: 181 KCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 300
+C+ CGH EAVFFQAT+RGEEGMTLFFVCCNPSCG RWR+
Sbjct: 75 RCSSCGHGEAVFFQATARGEEGMTLFFVCCNPSCGNRWRE 114
>gb|ESW10991.1| hypothetical protein PHAVU_009G256100g [Phaseolus vulgaris]
Length = 114
Score = 189 bits (479), Expect = 4e-46
Identities = 83/100 (83%), Positives = 92/100 (92%)
Frame = +1
Query: 1 YPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAADPTLPRTKAV 180
YP+EDR+QKILL+ACRNCDHQEVADN CVYRN I H VGE+TQ+LQDVAADPTLPRTK+V
Sbjct: 15 YPKEDRDQKILLYACRNCDHQEVADNFCVYRNEIHHSVGERTQVLQDVAADPTLPRTKSV 74
Query: 181 KCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 300
+C C H EAVFFQAT+RGEEGMTLFFVCCNP+CGYRWRD
Sbjct: 75 RCTQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD 114
>ref|XP_006419407.1| hypothetical protein CICLE_v10006256mg [Citrus clementina]
gi|568871362|ref|XP_006488857.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 9A-like [Citrus
sinensis] gi|557521280|gb|ESR32647.1| hypothetical
protein CICLE_v10006256mg [Citrus clementina]
Length = 114
Score = 189 bits (479), Expect = 4e-46
Identities = 82/100 (82%), Positives = 93/100 (93%)
Frame = +1
Query: 1 YPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAADPTLPRTKAV 180
YP+ED++QKILL+ACRNCDHQEVADNNCVYRN + H VGE+TQ+LQDVAADPTLPRTKAV
Sbjct: 15 YPKEDKDQKILLYACRNCDHQEVADNNCVYRNEVHHSVGERTQVLQDVAADPTLPRTKAV 74
Query: 181 KCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 300
+C C H EAVFFQATSRGEEGMTLFFVCCNP+CG+RWR+
Sbjct: 75 RCVKCQHGEAVFFQATSRGEEGMTLFFVCCNPNCGHRWRE 114
>ref|XP_003546327.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
9A-like [Glycine max]
Length = 114
Score = 189 bits (479), Expect = 4e-46
Identities = 83/100 (83%), Positives = 92/100 (92%)
Frame = +1
Query: 1 YPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAADPTLPRTKAV 180
YP+EDREQK+LLFACRNCDHQEVADN CVYRN I H VGE+TQ+LQDVAADPTLPRTK+V
Sbjct: 15 YPKEDREQKVLLFACRNCDHQEVADNFCVYRNEIQHPVGERTQVLQDVAADPTLPRTKSV 74
Query: 181 KCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 300
+C C H EAVFFQAT+RGEEGMTLFFVCCNP+CG+RWRD
Sbjct: 75 RCTQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114
>ref|XP_002976415.1| hypothetical protein SELMODRAFT_232741 [Selaginella moellendorffii]
gi|302811122|ref|XP_002987251.1| hypothetical protein
SELMODRAFT_125489 [Selaginella moellendorffii]
gi|300145148|gb|EFJ11827.1| hypothetical protein
SELMODRAFT_125489 [Selaginella moellendorffii]
gi|300156045|gb|EFJ22675.1| hypothetical protein
SELMODRAFT_232741 [Selaginella moellendorffii]
Length = 115
Score = 188 bits (477), Expect = 7e-46
Identities = 81/100 (81%), Positives = 92/100 (92%)
Frame = +1
Query: 1 YPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAADPTLPRTKAV 180
YP+EDR+QKILL+ACRNCDHQEVADNNCVYRN + H GE+TQ+LQDVA+DPTLPRTK+V
Sbjct: 15 YPKEDRDQKILLYACRNCDHQEVADNNCVYRNEVHHSAGERTQVLQDVASDPTLPRTKSV 74
Query: 181 KCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 300
+C C H EAVFFQAT+RGEEGMTLFFVCCNP+CGYRWRD
Sbjct: 75 RCVRCKHGEAVFFQATTRGEEGMTLFFVCCNPNCGYRWRD 114
>ref|NP_001235803.1| uncharacterized protein LOC100305979 [Glycine max]
gi|255627167|gb|ACU13928.1| unknown [Glycine max]
Length = 114
Score = 188 bits (477), Expect = 7e-46
Identities = 82/100 (82%), Positives = 93/100 (93%)
Frame = +1
Query: 1 YPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAADPTLPRTKAV 180
YP+EDR+QK+LLFACRNCDHQEVADN CVYRN I H VGE+TQ+LQDVAADPTLPRTK+V
Sbjct: 15 YPKEDRDQKVLLFACRNCDHQEVADNFCVYRNEIHHSVGERTQVLQDVAADPTLPRTKSV 74
Query: 181 KCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 300
+C+ C H EAVFFQAT+RGEEGMTLFFVCCNP+CG+RWRD
Sbjct: 75 RCSQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114
>gb|EOY06688.1| RNA polymerases M/15 Kd subunit [Theobroma cacao]
Length = 114
Score = 187 bits (474), Expect = 2e-45
Identities = 83/100 (83%), Positives = 92/100 (92%)
Frame = +1
Query: 1 YPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAADPTLPRTKAV 180
YP+EDREQKILL+ACRNCDHQEVA+NNCVYRN + H GE+TQILQDVAADPTLPRTK+V
Sbjct: 15 YPKEDREQKILLYACRNCDHQEVAENNCVYRNEVHHSAGERTQILQDVAADPTLPRTKSV 74
Query: 181 KCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 300
CA C H EAVFFQAT+RGEEGMTLFFVCCNP+CG+RWRD
Sbjct: 75 ICANCKHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114
>ref|XP_004962772.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
[Setaria italica]
Length = 114
Score = 186 bits (473), Expect = 2e-45
Identities = 83/100 (83%), Positives = 90/100 (90%)
Frame = +1
Query: 1 YPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAADPTLPRTKAV 180
YP+EDREQK+LL+ACRNCDHQEVADNNCVYRNV+ H GE TQ+LQDVA DPTLPRTK V
Sbjct: 15 YPKEDREQKVLLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQDVAGDPTLPRTKDV 74
Query: 181 KCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 300
+CAVCGH EAVFFQAT RGEEGMTLFFVCCN SCG RWR+
Sbjct: 75 RCAVCGHGEAVFFQATVRGEEGMTLFFVCCNLSCGNRWRE 114
>ref|XP_002519205.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
gi|223541520|gb|EEF43069.1| DNA-directed RNA polymerase
II, putative [Ricinus communis]
Length = 266
Score = 186 bits (473), Expect = 2e-45
Identities = 80/100 (80%), Positives = 92/100 (92%)
Frame = +1
Query: 1 YPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAADPTLPRTKAV 180
YP+EDR+QKILL+ACRNCDHQE+A++NCVYRN + H E+TQ+LQDVAADPTLPRTKAV
Sbjct: 167 YPKEDRDQKILLYACRNCDHQEIAESNCVYRNEVHHSAAERTQVLQDVAADPTLPRTKAV 226
Query: 181 KCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 300
+C VC HPEAVFFQAT+RGEEGMTLFFVCCNP CG+RWRD
Sbjct: 227 ECQVCKHPEAVFFQATARGEEGMTLFFVCCNPICGHRWRD 266
Score = 123 bits (309), Expect = 2e-26
Identities = 55/74 (74%), Positives = 65/74 (87%)
Frame = +1
Query: 1 YPREDREQKILLFACRNCDHQEVADNNCVYRNVIAHEVGEQTQILQDVAADPTLPRTKAV 180
YP+EDR+Q+ILL+ACRNC+HQEVAD+N VYRN I H V E TQILQDVA+DPTLPRTK+V
Sbjct: 15 YPKEDRKQRILLYACRNCEHQEVADSNRVYRNEIHHSVSEHTQILQDVASDPTLPRTKSV 74
Query: 181 KCAVCGHPEAVFFQ 222
+C+ CGH EAVF Q
Sbjct: 75 RCSACGHGEAVFLQ 88